F237236

General Info

Members Datasets Scaffolds Average Seq Length
161 101 322 286

Family's Representative Sequence

Representative Sequence 3300028577|Ga0265318_10061865|Ga0265318_100618651
Length 325
Sequence MIARRRKRHLPTAAGTGIAAGNIRAETRRAPMAFNHQLSGYVARVERGIDQLLPAEGTRPARLHAAMRYSLQAGGKRLRPVLLLAASELFPAAAGGPDPLPAAVALECIHTYSLIHDDLPCMDNDDLRRGRPTAHKAFDEATALLAGDALLTHAFVLLGSHYGPRPGLSLVRELASAAGSEHLIGGQMEDLLAEKKAETTAAELDYIHLNKTAAMIEAALVMGGIVGRADDDALHTLRLAGRQLGLAFQIIDDILDATADTAVLGKTAGKDAKAGKATFIKIHGLEAARRLAAKASEAGITEFRKLPGGATFLVELAAEMSARSH

Samples

Sample ID Description Type Environment
1 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
29 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
30 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
31 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
55 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
56 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
57 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
58 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
59 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
60 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
61 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
62 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
63 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
64 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
65 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
66 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
67 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
68 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
69 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
74 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
75 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
78 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
79 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
80 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
81 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
82 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
86 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
98 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
100 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
101 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.24
Nodule 0
Rhizoplane 0
Rhizosphere 96.27
Stem 0
Stem Tuber 0
Unclassified 1.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265318_10061865 3300028577 Bacteria 1394
2 rootH2_10030977 3300003320 Bacteria 6911
3 rootH1_10148332 3300003323 Bacteria 1533
4 Ga0070658_10245871 3300005327 Bacteria 1517
5 Ga0070683_100118688 3300005329 Bacteria 2498
6 Ga0068869_100000177 3300005334 Bacteria 32439
7 Ga0070660_100028719 3300005339 Bacteria 4164
8 Ga0070660_100033500 3300005339 Bacteria 3872
9 Ga0070661_100009954 3300005344 Bacteria 6595
10 Ga0070661_100149840 3300005344 Bacteria 1763
11 Ga0070673_100225686 3300005364 Bacteria 1623
12 Ga0070659_100089016 3300005366 Bacteria 2473
13 Ga0070659_100094360 3300005366 Bacteria 2402
14 Ga0070714_100017096 3300005435 Bacteria 5872
15 Ga0068867_100013544 3300005459 Bacteria 5775
16 Ga0070679_100045721 3300005530 Bacteria 4363
17 Ga0070679_100069811 3300005530 Bacteria 3505
18 Ga0070684_100030401 3300005535 Bacteria 4588
19 Ga0068853_100059525 3300005539 Bacteria 3300
20 Ga0068855_100051951 3300005563 Bacteria 4827
21 Ga0070664_100002268 3300005564 Bacteria 15470
22 Ga0068857_100002115 3300005577 Bacteria 16151
23 Ga0068854_100026101 3300005578 Bacteria 4012
24 Ga0068856_100219546 3300005614 Bacteria 1916
25 Ga0068852_100129280 3300005616 Bacteria 2324
26 Ga0068866_10153484 3300005718 Bacteria 1336
27 Ga0068851_10010549 3300005834 Bacteria 4314
28 Ga0097621_100001832 3300006237 Bacteria 14564
29 Ga0097621_100293939 3300006237 Bacteria 1433
30 Ga0068871_100029289 3300006358 Bacteria 4322
31 Ga0068865_100007827 3300006881 Bacteria 6594
32 Ga0105240_10008918 3300009093 Bacteria 14259
33 Ga0105241_10029586 3300009174 Bacteria 4089
34 Ga0105238_10002866 3300009551 Bacteria 17240
35 Ga0157373_10009413 3300013100 Bacteria 7215
36 Ga0157370_10136405 3300013104 Bacteria 2287
37 Ga0157369_10009135 3300013105 Bacteria 11343
38 Ga0163163_10328990 3300014325 Bacteria 1582
39 Ga0207656_10003406 3300025321 Bacteria 5460
40 Ga0207705_10150614 3300025909 Bacteria 1743
41 Ga0207654_10017704 3300025911 Bacteria 3731
42 Ga0207695_10267425 3300025913 Bacteria 1606
43 Ga0207657_10028071 3300025919 Bacteria 5142
44 Ga0207657_10071826 3300025919 Bacteria 2929
45 Ga0207649_10009326 3300025920 Bacteria 5369
46 Ga0207652_10052132 3300025921 Bacteria 3510
47 Ga0207694_10017487 3300025924 Bacteria 5418
48 Ga0207664_10018363 3300025929 Bacteria 5146
49 Ga0207690_10065762 3300025932 Bacteria 2481
50 Ga0207704_10008747 3300025938 Bacteria 4857
51 Ga0207689_10017433 3300025942 Bacteria 6077
52 Ga0207661_10221807 3300025944 Bacteria 1671
53 Ga0207679_10017365 3300025945 Bacteria 4799
54 Ga0207667_10005028 3300025949 Bacteria 16166
55 Ga0207640_10019271 3300025981 Bacteria 4028
56 Ga0207677_10052771 3300026023 Bacteria 2764
57 Ga0207648_10018287 3300026089 Bacteria 6349
58 Ga0207674_10000302 3300026116 Bacteria 62546
59 Ga0207698_10107818 3300026142 Bacteria 2326
60 Ga0265337_1009686 3300028556 Bacteria 3424
61 Ga0265337_1012134 3300028556 Bacteria 2939
62 Ga0265337_1046460 3300028556 Bacteria 1233
63 Ga0265319_1005330 3300028563 Bacteria 6172
64 Ga0265319_1005551 3300028563 Bacteria 6013
65 Ga0265319_1008936 3300028563 Bacteria 4330
66 Ga0265319_1009677 3300028563 Bacteria 4080
67 Ga0265319_1015293 3300028563 Bacteria 2981
68 Ga0265319_1051244 3300028563 Bacteria 1361
69 Ga0265334_10003520 3300028573 Bacteria 7103
70 Ga0265318_10000190 3300028577 Bacteria 54275
71 Ga0265318_10000434 3300028577 Bacteria 31774
72 Ga0265318_10006417 3300028577 Bacteria 5417
73 Ga0265323_10000014 3300028653 Bacteria 106540
74 Ga0265323_10003726 3300028653 Bacteria 6666
75 Ga0265323_10015668 3300028653 Bacteria 2977
76 Ga0265323_10038863 3300028653 Bacteria 1737
77 Ga0265322_10000647 3300028654 Bacteria 13105
78 Ga0265336_10001652 3300028666 Bacteria 9865
79 Ga0265336_10007980 3300028666 Bacteria 3737
80 Ga0307515_10271832 3300028794 Bacteria 1414
81 Ga0265324_10012315 3300029957 Bacteria 3228
82 Ga0265324_10019806 3300029957 Bacteria 2422
83 Ga0265330_10009561 3300031235 Bacteria 4602
84 Ga0265330_10048527 3300031235 Bacteria 1867
85 Ga0265332_10104296 3300031238 Bacteria 1195
86 Ga0265328_10054918 3300031239 Bacteria 1462
87 Ga0265320_10000205 3300031240 Bacteria 47959
88 Ga0265320_10000412 3300031240 Bacteria 34014
89 Ga0265320_10001630 3300031240 Bacteria 16057
90 Ga0265320_10010883 3300031240 Bacteria 5386
91 Ga0265320_10011623 3300031240 Bacteria 5170
92 Ga0265320_10038963 3300031240 Bacteria 2379
93 Ga0265339_10075810 3300031249 Bacteria 1785
94 Ga0265339_10133977 3300031249 Bacteria 1265
95 Ga0265331_10044047 3300031250 Bacteria 2159
96 Ga0265327_10001038 3300031251 Bacteria 39174
97 Ga0265327_10001211 3300031251 Bacteria 34800
98 Ga0265327_10034805 3300031251 Bacteria 2790
99 Ga0265316_10002595 3300031344 Bacteria 18652
100 Ga0265316_10020952 3300031344 Bacteria 5550
101 Ga0265316_10048839 3300031344 Bacteria 3337
102 Ga0265316_10073246 3300031344 Bacteria 2639
103 Ga0265316_10084799 3300031344 Bacteria 2426
104 Ga0307408_100000017 3300031548 Bacteria 355890
105 Ga0265313_10003592 3300031595 Bacteria 12461
106 Ga0265313_10005982 3300031595 Bacteria 8790
107 Ga0307508_10001637 3300031616 Bacteria 24947
108 Ga0265314_10011865 3300031711 Bacteria 7158
109 Ga0265314_10131355 3300031711 Bacteria 1562
110 Ga0265342_10005754 3300031712 Bacteria 9372
111 Ga0265342_10056013 3300031712 Bacteria 2338
112 Ga0265342_10110668 3300031712 Bacteria 1554
113 Ga0265342_10200499 3300031712 Bacteria 1084
114 Ga0307413_10215054 3300031824 Bacteria 1399
115 Ga0307410_10000038 3300031852 Bacteria 48028
116 Ga0307409_100001645 3300031995 Bacteria 11199
117 Ga0307416_100000034 3300032002 Bacteria 155632
118 Ga0307411_10133904 3300032005 Unclassified 1816
119 Ga0373951_0015973 3300035091 Bacteria 1692
120 Ga0373937_0293973 3300036401 Bacteria 1535
121 Ga0451577_0000024 3300042876 Bacteria 411758
122 Ga0451577_0004038 3300042876 Bacteria 15780
123 Ga0451577_0408564 3300042876 Bacteria 1232
124 Ga0453684_0008439 3300044712 Bacteria 18449
125 Ga0453684_0013233 3300044712 Bacteria 13441
126 Ga0453684_0082377 3300044712 Bacteria 4008
127 Ga0453684_0413700 3300044712 Bacteria 1508
128 Ga0451576_0002003 3300045051 Bacteria 32276
129 Ga0451576_0316780 3300045051 Unclassified 1632
130 Ga0495583_0053630 3300046506 Bacteria 1829
131 Ga0501031_0070522 3300049568 Bacteria 2276
132 Ga0501032_0000426 3300049569 Bacteria 34927
133 Ga0501032_0042438 3300049569 Bacteria 3085
134 Ga0501033_0000882 3300049570 Bacteria 27415
135 Ga0501033_0130292 3300049570 Bacteria 1822
136 Ga0501033_0137078 3300049570 Bacteria 1770
137 Ga0501034_0089305 3300049571 Bacteria 3079
138 Ga0501037_0019969 3300049573 Bacteria 4945
139 Ga0501038_0003970 3300049574 Bacteria 13740
140 Ga0501039_0432582 3300049575 Bacteria 1033
141 Ga0501042_0078249 3300049578 Bacteria 2368
142 Ga0501043_0137823 3300049579 Bacteria 1911
143 Ga0501043_0174789 3300049579 Bacteria 1674
144 Ga0501043_0240450 3300049579 Bacteria 1396
145 Ga0501046_0001090 3300049580 Bacteria 26582
146 Ga0501046_0018554 3300049580 Bacteria 5784
147 Ga0501046_0074688 3300049580 Bacteria 2630
148 Ga0501047_0022904 3300049581 Bacteria 5997
149 Ga0501047_0031620 3300049581 Bacteria 5105
150 Ga0501047_0032929 3300049581 Bacteria 5004
151 Ga0501047_0081985 3300049581 Bacteria 3101
152 Ga0501047_0104552 3300049581 Bacteria 2711
153 Ga0501047_0134838 3300049581 Bacteria 2349
154 Ga0501080_0517278 3300049742 Bacteria 1065
155 Ga0501035_0000537 3300049822 Bacteria 42223
156 Ga0501044_0001471 3300049823 Bacteria 27663
157 Ga0501044_0004363 3300049823 Bacteria 15839
158 Ga0501044_0062551 3300049823 Bacteria 3804
159 Ga0501044_0288923 3300049823 Bacteria 1571
160 nmdc:mga00v17_9181_c1 3300050491 Bacteria 5340
161 Ga0500622_0050266 3300053156 Bacteria 2148
162 Ga0265318_10061865
163 rootH2_10030977
164 rootH1_10148332
165 Ga0070658_10245871
166 Ga0070683_100118688
167 Ga0068869_100000177
168 Ga0070660_100028719
169 Ga0070660_100033500
170 Ga0070661_100009954
171 Ga0070661_100149840
172 Ga0070673_100225686
173 Ga0070659_100089016
174 Ga0070659_100094360
175 Ga0070714_100017096
176 Ga0068867_100013544
177 Ga0070679_100045721
178 Ga0070679_100069811
179 Ga0070684_100030401
180 Ga0068853_100059525
181 Ga0068855_100051951
182 Ga0070664_100002268
183 Ga0068857_100002115
184 Ga0068854_100026101
185 Ga0068856_100219546
186 Ga0068852_100129280
187 Ga0068866_10153484
188 Ga0068851_10010549
189 Ga0097621_100001832
190 Ga0097621_100293939
191 Ga0068871_100029289
192 Ga0068865_100007827
193 Ga0105240_10008918
194 Ga0105241_10029586
195 Ga0105238_10002866
196 Ga0157373_10009413
197 Ga0157370_10136405
198 Ga0157369_10009135
199 Ga0163163_10328990
200 Ga0207656_10003406
201 Ga0207705_10150614
202 Ga0207654_10017704
203 Ga0207695_10267425
204 Ga0207657_10028071
205 Ga0207657_10071826
206 Ga0207649_10009326
207 Ga0207652_10052132
208 Ga0207694_10017487
209 Ga0207664_10018363
210 Ga0207690_10065762
211 Ga0207704_10008747
212 Ga0207689_10017433
213 Ga0207661_10221807
214 Ga0207679_10017365
215 Ga0207667_10005028
216 Ga0207640_10019271
217 Ga0207677_10052771
218 Ga0207648_10018287
219 Ga0207674_10000302
220 Ga0207698_10107818
221 Ga0265337_1009686
222 Ga0265337_1012134
223 Ga0265337_1046460
224 Ga0265319_1005330
225 Ga0265319_1005551
226 Ga0265319_1008936
227 Ga0265319_1009677
228 Ga0265319_1015293
229 Ga0265319_1051244
230 Ga0265334_10003520
231 Ga0265318_10000190
232 Ga0265318_10000434
233 Ga0265318_10006417
234 Ga0265323_10000014
235 Ga0265323_10003726
236 Ga0265323_10015668
237 Ga0265323_10038863
238 Ga0265322_10000647
239 Ga0265336_10001652
240 Ga0265336_10007980
241 Ga0307515_10271832
242 Ga0265324_10012315
243 Ga0265324_10019806
244 Ga0265330_10009561
245 Ga0265330_10048527
246 Ga0265332_10104296
247 Ga0265328_10054918
248 Ga0265320_10000205
249 Ga0265320_10000412
250 Ga0265320_10001630
251 Ga0265320_10010883
252 Ga0265320_10011623
253 Ga0265320_10038963
254 Ga0265339_10075810
255 Ga0265339_10133977
256 Ga0265331_10044047
257 Ga0265327_10001038
258 Ga0265327_10001211
259 Ga0265327_10034805
260 Ga0265316_10002595
261 Ga0265316_10020952
262 Ga0265316_10048839
263 Ga0265316_10073246
264 Ga0265316_10084799
265 Ga0307408_100000017
266 Ga0265313_10003592
267 Ga0265313_10005982
268 Ga0307508_10001637
269 Ga0265314_10011865
270 Ga0265314_10131355
271 Ga0265342_10005754
272 Ga0265342_10056013
273 Ga0265342_10110668
274 Ga0265342_10200499
275 Ga0307413_10215054
276 Ga0307410_10000038
277 Ga0307409_100001645
278 Ga0307416_100000034
279 Ga0307411_10133904
280 Ga0373951_0015973
281 Ga0373937_0293973
282 Ga0451577_0000024
283 Ga0451577_0004038
284 Ga0451577_0408564
285 Ga0453684_0008439
286 Ga0453684_0013233
287 Ga0453684_0082377
288 Ga0453684_0413700
289 Ga0451576_0002003
290 Ga0451576_0316780
291 Ga0495583_0053630
292 Ga0501031_0070522
293 Ga0501032_0000426
294 Ga0501032_0042438
295 Ga0501033_0000882
296 Ga0501033_0130292
297 Ga0501033_0137078
298 Ga0501034_0089305
299 Ga0501037_0019969
300 Ga0501038_0003970
301 Ga0501039_0432582
302 Ga0501042_0078249
303 Ga0501043_0137823
304 Ga0501043_0174789
305 Ga0501043_0240450
306 Ga0501046_0001090
307 Ga0501046_0018554
308 Ga0501046_0074688
309 Ga0501047_0022904
310 Ga0501047_0031620
311 Ga0501047_0032929
312 Ga0501047_0081985
313 Ga0501047_0104552
314 Ga0501047_0134838
315 Ga0501080_0517278
316 Ga0501035_0000537
317 Ga0501044_0001471
318 Ga0501044_0004363
319 Ga0501044_0062551
320 Ga0501044_0288923
321 nmdc:mga00v17_9181_c1
322 Ga0500622_0050266

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00348

polyprenyl_synt

Polyprenyl synthetase

60

303

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
7mxz-assembly1.cif.gz_AAA sy-crte apo structure 0.9567 1 267
7my0-assembly1.cif.gz_B sy-crte ipp structure 0.9548 1 267
7my1-assembly1.cif.gz_AAA-2 sy-crte structure with ipp, n-term his-tag 0.9511 1 265
7my7-assembly1.cif.gz_AAA se-crte n-term his-tag structure 0.9476 1 267
7mxz-assembly1.cif.gz_BBB sy-crte apo structure 0.9475 1 267
ID Description Score Start End Superfamily
5aypA00 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.9451 3 267 1.10.600.10
2h8oA00 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.9416 2 266 1.10.600.10
af_A0A0P0V0B7_118_416_1.10.600.10 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.94 1 269 1.10.600.10
3lomB00 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.9387 3 268 1.10.600.10
af_A0A0P0V0B7_118_416_1.10.600.10 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.9367 1 269 1.10.600.10
ID Description Score Start End GO Terms
AF-A0A1G3ZWJ4-F1-model_v4 Polyprenyl synthetase 0.9666 1 269 GO:0004659
GO:0005737
GO:0008299
AF-A0A1G3ZWJ4-F1-model_v4 Polyprenyl synthetase 0.9631 1 269 GO:0004659
GO:0005737
GO:0008299
AF-A0A0U2VHX1-F1-model_v4 Geranylgeranyl diphosphate synthase 0.9597 1 205 GO:0004311
GO:0005737
GO:0008299
GO:0043231
AF-A0A2C6MBR7-F1-model_v4 Farnesyl-diphosphate synthase 0.9559 36 219 GO:0004659
GO:0005737
GO:0008299
AF-A0A1M3BCR0-F1-model_v4 Geranyl transferase 0.9556 6 269 GO:0004659
GO:0005737
GO:0008299

Map