F237228

General Info

Members Datasets Scaffolds Average Seq Length
161 95 322 380

Family's Representative Sequence

Representative Sequence 3300028558|Ga0265326_10022430|Ga0265326_100224302
Length 426
Sequence MTYWLPQCVNSLFSAMRKNLCYPPAMRIGSLTLPSNLFLSPLAGYTNLPFRLVVREIGGVGLCTTDLVNARSLLEKNPKAFKLIETRPADAPLAVQLFGSVPEEMRDAAQMLEARGIASVDINMGCPVRKVCNVGGGSAMMTELAKTAALVRGMVNAVKIPVTAKMRLGWDDQNITAPELARALEDAGVAAIFVHGRTREQGFGGTVNLAGIRAVVQAVKHVPVIGNGDVLTPPAAKRMFDETGCAGVSIGRGAFYNPWIFQHTLKYLNTSRRDELHESPNFQGRDALPRVQVDRQVSPTENTSLPPEPSFADRVRVMCRHLDLMIEVFGEELGCRMFRKVAPWHAKRFGPCHEFNKRAVHISTRAEFQGVLENYTRWRQQFLDEHGELLPRFQPPPMVASFMRDSEPASTRREQIPVPQGPVEVW

Samples

Sample ID Description Type Environment
1 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
10 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
26 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
30 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
40 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
41 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
42 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
43 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
44 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
45 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
46 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
47 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
48 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
49 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
50 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
51 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
52 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
53 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
54 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
55 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
56 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
57 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
58 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
59 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
60 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
63 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
64 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
65 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
66 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
67 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
68 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
69 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
70 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
71 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
72 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
73 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
74 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
75 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
76 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
77 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
78 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
79 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
80 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
81 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
82 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
83 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
84 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
85 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
93 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
94 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
95 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.24
Rhizosphere 98.76
Stem 0
Stem Tuber 0
Unclassified 9.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265326_10022430 3300028558 Bacteria 1808
2 Ga0070690_100009376 3300005330 Bacteria 5669
3 Ga0070670_100016059 3300005331 Bacteria 6425
4 Ga0070689_100025070 3300005340 Bacteria 4479
5 Ga0070689_100042768 3300005340 Unclassified 3479
6 Ga0070713_100108377 3300005436 Unclassified 2418
7 Ga0070701_10003493 3300005438 Bacteria 6230
8 Ga0070711_100002469 3300005439 Bacteria 10554
9 Ga0070694_100018366 3300005444 Bacteria 4438
10 Ga0070686_100030717 3300005544 Bacteria 3279
11 Ga0070704_100004624 3300005549 Bacteria 7964
12 Ga0068855_100128593 3300005563 Bacteria 2894
13 Ga0068857_100000849 3300005577 Bacteria 22898
14 Ga0068856_100185889 3300005614 Bacteria 2092
15 Ga0070702_100143202 3300005615 Unclassified 1525
16 Ga0068859_100385942 3300005617 Bacteria 1496
17 Ga0068864_100053942 3300005618 Bacteria 3469
18 Ga0068863_100032119 3300005841 Bacteria 5006
19 Ga0097621_100014697 3300006237 Bacteria 5867
20 Ga0068871_100083875 3300006358 Bacteria 2644
21 Ga0075428_100002301 3300006844 Bacteria 20676
22 Ga0075431_100003693 3300006847 Bacteria 14870
23 Ga0097620_100143968 3300006931 Bacteria 2458
24 Ga0097620_100385963 3300006931 Bacteria 1496
25 Ga0111539_10062938 3300009094 Bacteria 4391
26 Ga0105242_10151008 3300009176 Bacteria 2025
27 Ga0105242_10204146 3300009176 Unclassified 1757
28 Ga0105248_10222159 3300009177 Bacteria 2127
29 Ga0105249_10093078 3300009553 Bacteria 2823
30 Ga0157370_10103235 3300013104 Bacteria 2669
31 Ga0157372_10136946 3300013307 Unclassified 2820
32 Ga0163163_10000211 3300014325 Bacteria 60430
33 Ga0163163_10022796 3300014325 Bacteria 5934
34 Ga0163163_10024900 3300014325 Bacteria 5699
35 Ga0163163_10440630 3300014325 Bacteria 1362
36 Ga0207695_10042415 3300025913 Unclassified 4860
37 Ga0207663_10005885 3300025916 Bacteria 6220
38 Ga0207686_10222874 3300025934 Bacteria 1363
39 Ga0207670_10032070 3300025936 Bacteria 3375
40 Ga0207689_10316268 3300025942 Bacteria 1295
41 Ga0207667_10276046 3300025949 Bacteria 1718
42 Ga0207641_10038788 3300026088 Bacteria 3983
43 Ga0207641_10140775 3300026088 Bacteria 2177
44 Ga0207676_10084598 3300026095 Bacteria 2586
45 Ga0207674_10023085 3300026116 Bacteria 6671
46 Ga0207428_10089996 3300027907 Bacteria 2384
47 Ga0265337_1001151 3300028556 Bacteria 13511
48 Ga0265337_1003196 3300028556 Bacteria 7187
49 Ga0265337_1020208 3300028556 Bacteria 2087
50 Ga0265337_1022913 3300028556 Unclassified 1928
51 Ga0265326_10011535 3300028558 Unclassified 2602
52 Ga0265319_1015718 3300028563 Bacteria 2923
53 Ga0265334_10017431 3300028573 Bacteria 2966
54 Ga0265334_10026196 3300028573 Bacteria 2355
55 Ga0265323_10010320 3300028653 Bacteria 3790
56 Ga0265336_10001151 3300028666 Bacteria 12640
57 Ga0265336_10034805 3300028666 Bacteria 1555
58 Ga0265338_10000101 3300028800 Bacteria 159323
59 Ga0265338_10000316 3300028800 Bacteria 87532
60 Ga0265338_10000561 3300028800 Bacteria 65218
61 Ga0265338_10001201 3300028800 Bacteria 42815
62 Ga0265338_10001496 3300028800 Bacteria 37847
63 Ga0265338_10005152 3300028800 Bacteria 17199
64 Ga0265338_10005743 3300028800 Bacteria 16052
65 Ga0265338_10006578 3300028800 Bacteria 14748
66 Ga0265338_10006816 3300028800 Bacteria 14392
67 Ga0265338_10007842 3300028800 Bacteria 13115
68 Ga0265338_10008402 3300028800 Bacteria 12542
69 Ga0265338_10013953 3300028800 Bacteria 9013
70 Ga0265338_10028693 3300028800 Bacteria 5543
71 Ga0265338_10058067 3300028800 Unclassified 3419
72 Ga0265338_10083516 3300028800 Bacteria 2671
73 Ga0265338_10129606 3300028800 Bacteria 1994
74 Ga0265338_10140371 3300028800 Bacteria 1893
75 Ga0265338_10173851 3300028800 Bacteria 1649
76 Ga0265324_10002095 3300029957 Bacteria 10557
77 Ga0265324_10042589 3300029957 Bacteria 1569
78 Ga0265332_10018091 3300031238 Bacteria 3106
79 Ga0265332_10038012 3300031238 Bacteria 2087
80 Ga0265320_10005109 3300031240 Bacteria 8477
81 Ga0265320_10006849 3300031240 Bacteria 7137
82 Ga0265320_10011669 3300031240 Bacteria 5159
83 Ga0265320_10029581 3300031240 Bacteria 2834
84 Ga0265320_10044816 3300031240 Bacteria 2177
85 Ga0265329_10000787 3300031242 Bacteria 16110
86 Ga0265340_10036843 3300031247 Unclassified 2423
87 Ga0265339_10038608 3300031249 Bacteria 2663
88 Ga0265327_10002566 3300031251 Bacteria 18819
89 Ga0265327_10004141 3300031251 Bacteria 13082
90 Ga0265316_10004788 3300031344 Bacteria 13352
91 Ga0265316_10008264 3300031344 Bacteria 9676
92 Ga0265316_10111143 3300031344 Bacteria 2075
93 Ga0265313_10004126 3300031595 Bacteria 11296
94 Ga0265314_10000105 3300031711 Bacteria 126697
95 Ga0265314_10050271 3300031711 Bacteria 2913
96 Ga0265314_10118891 3300031711 Bacteria 1667
97 Ga0265342_10014782 3300031712 Bacteria 5169
98 Ga0373953_0016502 3300035117 Bacteria 2697
99 Ga0373954_0025939 3300035118 Bacteria 2683
100 Ga0373956_0028188 3300035119 Bacteria 2442
101 Ga0373937_0005321 3300036401 Bacteria 11001
102 Ga0373937_0144050 3300036401 Bacteria 2230
103 Ga0453684_0000019 3300044712 Bacteria 908702
104 Ga0453684_0098529 3300044712 Unclassified 3583
105 Ga0451576_0089048 3300045051 Bacteria 3210
106 Ga0451576_0118102 3300045051 Bacteria 2761
107 Ga0451576_0160705 3300045051 Bacteria 2344
108 Ga0451576_0169304 3300045051 Bacteria 2280
109 Ga0451576_0195455 3300045051 Bacteria 2113
110 Ga0451576_0438504 3300045051 Unclassified 1371
111 Ga0495592_0000615 3300046454 Bacteria 25232
112 Ga0495592_0059785 3300046454 Bacteria 2805
113 Ga0495639_0096939 3300046475 Bacteria 1389
114 Ga0495662_0036847 3300046476 Bacteria 2360
115 Ga0495618_0020472 3300046514 Bacteria 4071
116 Ga0495618_0024713 3300046514 Bacteria 3723
117 Ga0495628_0001080 3300046516 Bacteria 24911
118 Ga0495630_0000220 3300046517 Bacteria 45190
119 Ga0495640_0077674 3300046533 Bacteria 2213
120 Ga0495640_0082974 3300046533 Bacteria 2127
121 Ga0495640_0193871 3300046533 Bacteria 1290
122 Ga0495586_0000017 3300046535 Bacteria 116426
123 Ga0495586_0001775 3300046535 Bacteria 11786
124 Ga0495586_0076210 3300046535 Bacteria 1837
125 Ga0495645_0051819 3300046543 Bacteria 2986
126 Ga0495645_0057567 3300046543 Bacteria 2821
127 Ga0495667_0042557 3300046559 Bacteria 3012
128 Ga0495634_0002821 3300046642 Bacteria 14268
129 Ga0495634_0039584 3300046642 Unclassified 3210
130 Ga0495599_0110527 3300046678 Bacteria 1712
131 Ga0495658_0006460 3300046683 Bacteria 5759
132 Ga0495658_0054136 3300046683 Bacteria 2281
133 Ga0495669_0075328 3300046684 Bacteria 1544
134 Ga0495613_0003333 3300046689 Bacteria 12013
135 Ga0495613_0011563 3300046689 Bacteria 6562
136 Ga0495613_0155256 3300046689 Bacteria 1631
137 Ga0495581_0094277 3300047315 Bacteria 1738
138 Ga0495674_0047740 3300047319 Bacteria 3794
139 Ga0495674_0057180 3300047319 Bacteria 3414
140 Ga0495676_0032022 3300047321 Unclassified 4443
141 Ga0495680_0072248 3300047322 Bacteria 2625
142 Ga0495684_0109599 3300047471 Bacteria 2085
143 Ga0496106_0064937 3300048909 Bacteria 2778
144 Ga0496107_0037639 3300048910 Bacteria 3472
145 Ga0501031_0000127 3300049568 Bacteria 42244
146 Ga0501032_0009187 3300049569 Bacteria 7166
147 Ga0501032_0028567 3300049569 Bacteria 3832
148 Ga0501033_0003955 3300049570 Bacteria 12015
149 Ga0501033_0136949 3300049570 Unclassified 1772
150 Ga0501034_0361337 3300049571 Bacteria 1379
151 Ga0501043_0046034 3300049579 Bacteria 3430
152 Ga0501035_0013606 3300049822 Bacteria 7506
153 Ga0501035_0249567 3300049822 Bacteria 1507
154 Ga0501044_0000679 3300049823 Bacteria 41172
155 Ga0501044_0054608 3300049823 Bacteria 4105
156 nmdc:mga0qj67_253626_c1 3300050509 Bacteria 1427
157 nmdc:mga0qj67_85800_c1 3300050509 Bacteria 2525
158 nmdc:mga06r32_105917_c1 3300050510 Bacteria 2763
159 nmdc:mga08y16_145830_c1 3300050511 Bacteria 2461
160 nmdc:mga08y16_556578_c1 3300050511 Bacteria 1160
161 Ga0495601_0235673 3300053077 Bacteria 1195
162 Ga0265326_10022430
163 Ga0070690_100009376
164 Ga0070670_100016059
165 Ga0070689_100025070
166 Ga0070689_100042768
167 Ga0070713_100108377
168 Ga0070701_10003493
169 Ga0070711_100002469
170 Ga0070694_100018366
171 Ga0070686_100030717
172 Ga0070704_100004624
173 Ga0068855_100128593
174 Ga0068857_100000849
175 Ga0068856_100185889
176 Ga0070702_100143202
177 Ga0068859_100385942
178 Ga0068864_100053942
179 Ga0068863_100032119
180 Ga0097621_100014697
181 Ga0068871_100083875
182 Ga0075428_100002301
183 Ga0075431_100003693
184 Ga0097620_100143968
185 Ga0097620_100385963
186 Ga0111539_10062938
187 Ga0105242_10151008
188 Ga0105242_10204146
189 Ga0105248_10222159
190 Ga0105249_10093078
191 Ga0157370_10103235
192 Ga0157372_10136946
193 Ga0163163_10000211
194 Ga0163163_10022796
195 Ga0163163_10024900
196 Ga0163163_10440630
197 Ga0207695_10042415
198 Ga0207663_10005885
199 Ga0207686_10222874
200 Ga0207670_10032070
201 Ga0207689_10316268
202 Ga0207667_10276046
203 Ga0207641_10038788
204 Ga0207641_10140775
205 Ga0207676_10084598
206 Ga0207674_10023085
207 Ga0207428_10089996
208 Ga0265337_1001151
209 Ga0265337_1003196
210 Ga0265337_1020208
211 Ga0265337_1022913
212 Ga0265326_10011535
213 Ga0265319_1015718
214 Ga0265334_10017431
215 Ga0265334_10026196
216 Ga0265323_10010320
217 Ga0265336_10001151
218 Ga0265336_10034805
219 Ga0265338_10000101
220 Ga0265338_10000316
221 Ga0265338_10000561
222 Ga0265338_10001201
223 Ga0265338_10001496
224 Ga0265338_10005152
225 Ga0265338_10005743
226 Ga0265338_10006578
227 Ga0265338_10006816
228 Ga0265338_10007842
229 Ga0265338_10008402
230 Ga0265338_10013953
231 Ga0265338_10028693
232 Ga0265338_10058067
233 Ga0265338_10083516
234 Ga0265338_10129606
235 Ga0265338_10140371
236 Ga0265338_10173851
237 Ga0265324_10002095
238 Ga0265324_10042589
239 Ga0265332_10018091
240 Ga0265332_10038012
241 Ga0265320_10005109
242 Ga0265320_10006849
243 Ga0265320_10011669
244 Ga0265320_10029581
245 Ga0265320_10044816
246 Ga0265329_10000787
247 Ga0265340_10036843
248 Ga0265339_10038608
249 Ga0265327_10002566
250 Ga0265327_10004141
251 Ga0265316_10004788
252 Ga0265316_10008264
253 Ga0265316_10111143
254 Ga0265313_10004126
255 Ga0265314_10000105
256 Ga0265314_10050271
257 Ga0265314_10118891
258 Ga0265342_10014782
259 Ga0373953_0016502
260 Ga0373954_0025939
261 Ga0373956_0028188
262 Ga0373937_0005321
263 Ga0373937_0144050
264 Ga0453684_0000019
265 Ga0453684_0098529
266 Ga0451576_0089048
267 Ga0451576_0118102
268 Ga0451576_0160705
269 Ga0451576_0169304
270 Ga0451576_0195455
271 Ga0451576_0438504
272 Ga0495592_0000615
273 Ga0495592_0059785
274 Ga0495639_0096939
275 Ga0495662_0036847
276 Ga0495618_0020472
277 Ga0495618_0024713
278 Ga0495628_0001080
279 Ga0495630_0000220
280 Ga0495640_0077674
281 Ga0495640_0082974
282 Ga0495640_0193871
283 Ga0495586_0000017
284 Ga0495586_0001775
285 Ga0495586_0076210
286 Ga0495645_0051819
287 Ga0495645_0057567
288 Ga0495667_0042557
289 Ga0495634_0002821
290 Ga0495634_0039584
291 Ga0495599_0110527
292 Ga0495658_0006460
293 Ga0495658_0054136
294 Ga0495669_0075328
295 Ga0495613_0003333
296 Ga0495613_0011563
297 Ga0495613_0155256
298 Ga0495581_0094277
299 Ga0495674_0047740
300 Ga0495674_0057180
301 Ga0495676_0032022
302 Ga0495680_0072248
303 Ga0495684_0109599
304 Ga0496106_0064937
305 Ga0496107_0037639
306 Ga0501031_0000127
307 Ga0501032_0009187
308 Ga0501032_0028567
309 Ga0501033_0003955
310 Ga0501033_0136949
311 Ga0501034_0361337
312 Ga0501043_0046034
313 Ga0501035_0013606
314 Ga0501035_0249567
315 Ga0501044_0000679
316 Ga0501044_0054608
317 nmdc:mga0qj67_253626_c1
318 nmdc:mga0qj67_85800_c1
319 nmdc:mga06r32_105917_c1
320 nmdc:mga08y16_145830_c1
321 nmdc:mga08y16_556578_c1
322 Ga0495601_0235673

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01207

Dus

Dihydrouridine synthase (Dus)

38

384

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ei9-assembly2.cif.gz_B crystal structure of e. coli trna-dihydrouridine synthase b (dusb) 0.9389 1 365
1vhn-assembly1.cif.gz_A crystal structure of a putative flavin oxidoreductase with flavin 0.9214 11 368
1vhn-assembly1.cif.gz_A crystal structure of a putative flavin oxidoreductase with flavin 0.9099 11 368
6ei9-assembly2.cif.gz_B crystal structure of e. coli trna-dihydrouridine synthase b (dusb) 0.9096 1 365
4bfa-assembly2.cif.gz_B crystal structure of e. coli dihydrouridine synthase c (dusc) 0.8365 10 363
ID Description Score Start End Superfamily
af_Q9VIS4_253_495_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9351 6 240 3.20.20.70
af_P0ABT5_6_247_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9343 6 244 3.20.20.70
af_Q54ES7_56_285_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9309 13 237 3.20.20.70
af_P9WNS7_19_267_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9274 7 239 3.20.20.70
af_Q9TYN2_201_445_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9251 11 239 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A7V6BD64-F1-model_v4 tRNA dihydrouridine synthase DusB 0.96 1 244 GO:0003723
GO:0017150
GO:0050660
AF-A0A7X8Z2Y0-F1-model_v4 tRNA-dihydrouridine synthase (EC 1.3.1.-) 0.9545 1 371 GO:0000049
GO:0017150
GO:0050660
AF-A0A0S8AU96-F1-model_v4 tRNA-dihydrouridine synthase (EC 1.3.1.-) 0.9543 1 364 GO:0000049
GO:0017150
GO:0050660
AF-A0A523TZK1-F1-model_v4 tRNA-dihydrouridine synthase (EC 1.3.1.-) 0.9541 1 365 GO:0000049
GO:0017150
GO:0050660
AF-A0A1Z9IC63-F1-model_v4 deleted 0.9526 1 137

Map