F236615

General Info

Members Datasets Scaffolds Average Seq Length
161 116 322 76

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10089762|Ga0081539_100897623
Length 65
Sequence MMGKPVIAGTRITVELVLEKLAAGYSIAGMQVYRHLSEEGVRAAIEFAREALRADVVYPVDKIAS

Samples

Sample ID Description Type Environment
1 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
25 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
37 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
38 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
44 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
71 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
72 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
73 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
74 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
75 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
78 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
79 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
80 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
81 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
82 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
83 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
84 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
85 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
86 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
87 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
88 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
89 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
90 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
91 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
92 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
93 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
94 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
99 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
100 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
101 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
102 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
103 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049851 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_B_0_drought Metagenome Rhizosphere
106 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
107 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
108 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
109 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
110 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
111 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
112 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
113 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
114 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
115 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
116 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.38
Metatranscriptomes 0.62
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.24
Nodule 0
Rhizoplane 2.48
Rhizosphere 93.17
Stem 0
Stem Tuber 0
Unclassified 44.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081539_10089762 3300005985 Unclassified 1591
2 JGI24751J29686_10058491 3300002459 Bacteria 794
3 JGI25406J46586_10011970 3300003203 Bacteria 3782
4 JGI25406J46586_10192638 3300003203 Bacteria 595
5 JGI25407J50210_10079758 3300003373 Unclassified 814
6 Ga0058860_11368908 3300004801 Unclassified 522
7 Ga0065715_10271836 3300005293 Unclassified 1109
8 Ga0070690_100489372 3300005330 Unclassified 918
9 Ga0070670_100490484 3300005331 Bacteria 1092
10 Ga0070680_100731028 3300005336 Unclassified 852
11 Ga0070689_101967681 3300005340 Bacteria 534
12 Ga0070691_10839781 3300005341 Unclassified 562
13 Ga0070673_100563510 3300005364 Unclassified 1036
14 Ga0070688_100165157 3300005365 Bacteria 1524
15 Ga0070667_100422705 3300005367 Bacteria 1215
16 Ga0070667_102334351 3300005367 Unclassified 504
17 Ga0070701_11409666 3300005438 Unclassified 501
18 Ga0070700_100536678 3300005441 Bacteria 906
19 Ga0070708_100637640 3300005445 Bacteria 1004
20 Ga0070708_101055831 3300005445 Bacteria 761
21 Ga0070685_10521311 3300005466 Bacteria 844
22 Ga0070706_100028152 3300005467 Bacteria 5172
23 Ga0070706_100142503 3300005467 Unclassified 2237
24 Ga0070706_101855732 3300005467 Unclassified 547
25 Ga0070707_100825142 3300005468 Unclassified 891
26 Ga0070707_101019508 3300005468 Unclassified 793
27 Ga0070698_100249228 3300005471 Unclassified 1709
28 Ga0070699_100772845 3300005518 Bacteria 879
29 Ga0070697_101643938 3300005536 Unclassified 574
30 Ga0070686_100009818 3300005544 Bacteria 5377
31 Ga0070686_101217765 3300005544 Bacteria 626
32 Ga0070696_100741236 3300005546 Unclassified 804
33 Ga0070704_100426246 3300005549 Bacteria 1137
34 Ga0070704_100875392 3300005549 Bacteria 806
35 Ga0070704_100918453 3300005549 Bacteria 788
36 Ga0068855_101026240 3300005563 Unclassified 865
37 Ga0068856_100651633 3300005614 Unclassified 1074
38 Ga0068852_101457578 3300005616 Unclassified 707
39 Ga0068859_102377642 3300005617 Unclassified 584
40 Ga0068861_101983991 3300005719 Unclassified 580
41 Ga0068862_100158064 3300005844 Bacteria 2022
42 Ga0081538_10018678 3300005981 Bacteria 5192
43 Ga0081538_10035200 3300005981 Bacteria 3294
44 Ga0081540_1220386 3300005983 Unclassified 675
45 Ga0081539_10000725 3300005985 Bacteria 66076
46 Ga0081539_10001637 3300005985 Bacteria 36505
47 Ga0081539_10009165 3300005985 Bacteria 8353
48 Ga0081539_10023149 3300005985 Bacteria 4078
49 Ga0081539_10131238 3300005985 Unclassified 1230
50 Ga0075428_100128444 3300006844 Bacteria 2757
51 Ga0075430_100054450 3300006846 Unclassified 3366
52 Ga0075430_101354449 3300006846 Bacteria 585
53 Ga0075431_100195059 3300006847 Bacteria 2074
54 Ga0075431_100461946 3300006847 Unclassified 1264
55 Ga0075434_101098668 3300006871 Bacteria 808
56 Ga0075434_101309983 3300006871 Unclassified 735
57 Ga0075429_101527926 3300006880 Unclassified 581
58 Ga0075429_101609470 3300006880 Unclassified 565
59 Ga0097620_102377196 3300006931 Unclassified 584
60 Ga0075435_101054328 3300007076 Unclassified 710
61 Ga0114129_10499844 3300009147 Bacteria 1588
62 Ga0105243_12680146 3300009148 Unclassified 539
63 Ga0105241_10302849 3300009174 Unclassified 1372
64 Ga0105248_12294210 3300009177 Bacteria 614
65 Ga0105237_10775443 3300009545 Bacteria 965
66 Ga0105238_10000003 3300009551 Bacteria 422077
67 Ga0105249_10181357 3300009553 Bacteria 2049
68 Ga0105249_10831941 3300009553 Bacteria 988
69 Ga0105239_13414529 3300010375 Unclassified 517
70 Ga0157373_10216040 3300013100 Bacteria 1352
71 Ga0157378_10181726 3300013297 Unclassified 1979
72 Ga0157378_11365154 3300013297 Unclassified 751
73 Ga0163162_11914324 3300013306 Bacteria 679
74 Ga0163162_13345511 3300013306 Unclassified 513
75 Ga0157372_10934777 3300013307 Bacteria 1005
76 Ga0157375_11857246 3300013308 Bacteria 715
77 Ga0163163_10033459 3300014325 Bacteria 4973
78 Ga0157376_12301224 3300014969 Bacteria 578
79 Ga0207684_10129144 3300025910 Bacteria 2169
80 Ga0207660_11105574 3300025917 Unclassified 646
81 Ga0207646_10711570 3300025922 Unclassified 898
82 Ga0207646_10873386 3300025922 Unclassified 799
83 Ga0207694_10000020 3300025924 Bacteria 310240
84 Ga0207687_10367598 3300025927 Unclassified 1175
85 Ga0207665_10294037 3300025939 Bacteria 1212
86 Ga0207665_10976876 3300025939 Unclassified 673
87 Ga0207667_11349982 3300025949 Unclassified 688
88 Ga0207712_11310123 3300025961 Bacteria 647
89 Ga0207658_10218692 3300025986 Bacteria 1601
90 Ga0207702_10189704 3300026078 Bacteria 1898
91 Ga0207641_11584014 3300026088 Bacteria 657
92 Ga0207675_102728039 3300026118 Unclassified 502
93 Ga0207698_11004597 3300026142 Unclassified 845
94 Ga0207428_10085050 3300027907 Bacteria 2464
95 Ga0265339_10219419 3300031249 Unclassified 931
96 Ga0316579_10003602 3300031691 Bacteria 6079
97 Ga0316579_10094145 3300031691 Bacteria 1431
98 Ga0316576_10061460 3300031727 Bacteria 2753
99 Ga0316578_10119193 3300031728 Bacteria 1586
100 Ga0316577_10001850 3300031733 Bacteria 10219
101 Ga0316577_10061343 3300031733 Bacteria 2098
102 Ga0316577_10448519 3300031733 Bacteria 733
103 Ga0316577_10550876 3300031733 Bacteria 656
104 Ga0316577_10888059 3300031733 Unclassified 505
105 Ga0307416_102493721 3300032002 Unclassified 616
106 Ga0316585_10111766 3300032137 Bacteria 898
107 Ga0373961_0336230 3300035241 Unclassified 566
108 Ga0316582_0006800 3300036647 Bacteria 6038
109 Ga0316582_0101397 3300036647 Bacteria 1907
110 Ga0316582_0105630 3300036647 Bacteria 1869
111 Ga0316582_0799846 3300036647 Bacteria 646
112 Ga0316584_0002454 3300036712 Unclassified 11728
113 Ga0316584_0016734 3300036712 Bacteria 5261
114 Ga0316581_0001859 3300037588 Bacteria 4912
115 Ga0316581_0041595 3300037588 Unclassified 1401
116 Ga0316581_0127182 3300037588 Bacteria 785
117 Ga0400483_008640 3300039062 Bacteria 1372
118 Ga0400489_45934 3300039093 Bacteria 1550
119 Ga0436365_0220210 3300039437 Bacteria 525
120 Ga0436365_0452035 3300039437 Unclassified 606
121 Ga0451789_0127931 3300041443 Bacteria 1260
122 Ga0439448_0136054 3300042005 Unclassified 849
123 Ga0453683_0120345 3300044673 Bacteria 1653
124 Ga0453684_0611902 3300044712 Unclassified 1193
125 Ga0495632_0115171 3300046519 Bacteria 1259
126 Ga0495621_0002649 3300046539 Bacteria 4839
127 Ga0496105_0212681 3300048908 Unclassified 1575
128 Ga0496114_0000137 3300048917 Bacteria 53099
129 Ga0496115_1194263 3300048918 Unclassified 572
130 Ga0501032_0278971 3300049569 Bacteria 1082
131 Ga0501037_0044191 3300049573 Bacteria 3272
132 Ga0501040_0741412 3300049576 Unclassified 711
133 Ga0501047_0376370 3300049581 Unclassified 1255
134 Ga0501070_0072026 3300049586 Bacteria 2861
135 Ga0501072_0924734 3300049588 Unclassified 681
136 Ga0501075_0222464 3300049591 Unclassified 1440
137 Ga0501239_006017 3300049672 Unclassified 1236
138 Ga0501080_0043179 3300049742 Bacteria 4197
139 Ga0501083_0414808 3300049744 Bacteria 876
140 Ga0501044_0000848 3300049823 Bacteria 36732
141 Ga0501212_052634 3300049851 Bacteria 692
142 nmdc:mga05p37_160477_c1 3300050507 Bacteria 1670
143 nmdc:mga05p37_218033_c1 3300050507 Bacteria 2304
144 nmdc:mga09592_1158885_c1 3300050508 Unclassified 640
145 nmdc:mga09592_1176707_c1 3300050508 Unclassified 635
146 nmdc:mga09592_1529796_c1 3300050508 Unclassified 542
147 nmdc:mga0qj67_210686_c1 3300050509 Bacteria 1578
148 nmdc:mga0qj67_45816_c1 3300050509 Unclassified 3450
149 nmdc:mga06r32_1002231_c1 3300050510 Unclassified 788
150 nmdc:mga06r32_150138_c1 3300050510 Bacteria 2308
151 nmdc:mga06r32_431217_c1 3300050510 Unclassified 1299
152 nmdc:mga0n895_1954104_c1 3300050512 Unclassified 545
153 nmdc:mga0n895_555715_c1 3300050512 Bacteria 1153
154 nmdc:mga0rr50_390654_c1 3300050513 Unclassified 1174
155 nmdc:mga0rr50_854433_c1 3300050513 Unclassified 776
156 nmdc:mga08x19_2_c1 3300050514 Bacteria 741277
157 nmdc:mga0a205_58612_c1 3300050515 Bacteria 3719
158 Ga0500616_0001488 3300053153 Bacteria 22216
159 Ga0500616_0096982 3300053153 Unclassified 1448
160 Ga0501084_1216646 3300054114 Bacteria 632
161 Ga0530510_1482581 3300061734 Unclassified 521
162 Ga0081539_10089762
163 JGI24751J29686_10058491
164 JGI25406J46586_10011970
165 JGI25406J46586_10192638
166 JGI25407J50210_10079758
167 Ga0058860_11368908
168 Ga0065715_10271836
169 Ga0070690_100489372
170 Ga0070670_100490484
171 Ga0070680_100731028
172 Ga0070689_101967681
173 Ga0070691_10839781
174 Ga0070673_100563510
175 Ga0070688_100165157
176 Ga0070667_100422705
177 Ga0070667_102334351
178 Ga0070701_11409666
179 Ga0070700_100536678
180 Ga0070708_100637640
181 Ga0070708_101055831
182 Ga0070685_10521311
183 Ga0070706_100028152
184 Ga0070706_100142503
185 Ga0070706_101855732
186 Ga0070707_100825142
187 Ga0070707_101019508
188 Ga0070698_100249228
189 Ga0070699_100772845
190 Ga0070697_101643938
191 Ga0070686_100009818
192 Ga0070686_101217765
193 Ga0070696_100741236
194 Ga0070704_100426246
195 Ga0070704_100875392
196 Ga0070704_100918453
197 Ga0068855_101026240
198 Ga0068856_100651633
199 Ga0068852_101457578
200 Ga0068859_102377642
201 Ga0068861_101983991
202 Ga0068862_100158064
203 Ga0081538_10018678
204 Ga0081538_10035200
205 Ga0081540_1220386
206 Ga0081539_10000725
207 Ga0081539_10001637
208 Ga0081539_10009165
209 Ga0081539_10023149
210 Ga0081539_10131238
211 Ga0075428_100128444
212 Ga0075430_100054450
213 Ga0075430_101354449
214 Ga0075431_100195059
215 Ga0075431_100461946
216 Ga0075434_101098668
217 Ga0075434_101309983
218 Ga0075429_101527926
219 Ga0075429_101609470
220 Ga0097620_102377196
221 Ga0075435_101054328
222 Ga0114129_10499844
223 Ga0105243_12680146
224 Ga0105241_10302849
225 Ga0105248_12294210
226 Ga0105237_10775443
227 Ga0105238_10000003
228 Ga0105249_10181357
229 Ga0105249_10831941
230 Ga0105239_13414529
231 Ga0157373_10216040
232 Ga0157378_10181726
233 Ga0157378_11365154
234 Ga0163162_11914324
235 Ga0163162_13345511
236 Ga0157372_10934777
237 Ga0157375_11857246
238 Ga0163163_10033459
239 Ga0157376_12301224
240 Ga0207684_10129144
241 Ga0207660_11105574
242 Ga0207646_10711570
243 Ga0207646_10873386
244 Ga0207694_10000020
245 Ga0207687_10367598
246 Ga0207665_10294037
247 Ga0207665_10976876
248 Ga0207667_11349982
249 Ga0207712_11310123
250 Ga0207658_10218692
251 Ga0207702_10189704
252 Ga0207641_11584014
253 Ga0207675_102728039
254 Ga0207698_11004597
255 Ga0207428_10085050
256 Ga0265339_10219419
257 Ga0316579_10003602
258 Ga0316579_10094145
259 Ga0316576_10061460
260 Ga0316578_10119193
261 Ga0316577_10001850
262 Ga0316577_10061343
263 Ga0316577_10448519
264 Ga0316577_10550876
265 Ga0316577_10888059
266 Ga0307416_102493721
267 Ga0316585_10111766
268 Ga0373961_0336230
269 Ga0316582_0006800
270 Ga0316582_0101397
271 Ga0316582_0105630
272 Ga0316582_0799846
273 Ga0316584_0002454
274 Ga0316584_0016734
275 Ga0316581_0001859
276 Ga0316581_0041595
277 Ga0316581_0127182
278 Ga0400483_008640
279 Ga0400489_45934
280 Ga0436365_0220210
281 Ga0436365_0452035
282 Ga0451789_0127931
283 Ga0439448_0136054
284 Ga0453683_0120345
285 Ga0453684_0611902
286 Ga0495632_0115171
287 Ga0495621_0002649
288 Ga0496105_0212681
289 Ga0496114_0000137
290 Ga0496115_1194263
291 Ga0501032_0278971
292 Ga0501037_0044191
293 Ga0501040_0741412
294 Ga0501047_0376370
295 Ga0501070_0072026
296 Ga0501072_0924734
297 Ga0501075_0222464
298 Ga0501239_006017
299 Ga0501080_0043179
300 Ga0501083_0414808
301 Ga0501044_0000848
302 Ga0501212_052634
303 nmdc:mga05p37_160477_c1
304 nmdc:mga05p37_218033_c1
305 nmdc:mga09592_1158885_c1
306 nmdc:mga09592_1176707_c1
307 nmdc:mga09592_1529796_c1
308 nmdc:mga0qj67_210686_c1
309 nmdc:mga0qj67_45816_c1
310 nmdc:mga06r32_1002231_c1
311 nmdc:mga06r32_150138_c1
312 nmdc:mga06r32_431217_c1
313 nmdc:mga0n895_1954104_c1
314 nmdc:mga0n895_555715_c1
315 nmdc:mga0rr50_390654_c1
316 nmdc:mga0rr50_854433_c1
317 nmdc:mga08x19_2_c1
318 nmdc:mga0a205_58612_c1
319 Ga0500616_0001488
320 Ga0500616_0096982
321 Ga0501084_1216646
322 Ga0530510_1482581

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04255

DUF433

Protein of unknown function (DUF433)

1

48

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ga1-assembly1.cif.gz_B crystal structure of a duf433 member protein (ava_0674) from anabaena variabilis atcc 29413 at 2.00 a resolution 0.9115 3 68
5af3-assembly1.cif.gz_B x-ray crystal structure of rv2018 from mycobacterium tuberculosis 0.8386 4 58
5af3-assembly1.cif.gz_A x-ray crystal structure of rv2018 from mycobacterium tuberculosis 0.8386 4 58
2ga1-assembly1.cif.gz_B crystal structure of a duf433 member protein (ava_0674) from anabaena variabilis atcc 29413 at 2.00 a resolution 0.772 3 68
6qid-assembly1.cif.gz_A crystal structure of deah-box atpase prp43-s387a 0.7107 26 66
ID Description Score Start End Superfamily
2ga1B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9058 6 68 1.10.10.10
af_P9WLC5_172_234_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8531 6 67 1.10.10.10
af_P9WLC5_172_234_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8179 6 67 1.10.10.10
2ga1B02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7722 6 68 1.10.10.10
af_Q95XQ8_742_823_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7343 26 65 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A150P413-F1-model_v4 Antitoxin 1.006 4 66
AF-A0A2E0VUP0-F1-model_v4 DUF433 domain-containing protein 1.005 5 66
AF-A5UR58-F1-model_v4 DUF433 domain-containing protein 1.002 4 66
AF-A0A535FB49-F1-model_v4 DUF433 domain-containing protein 1.002 1 60
AF-A0A3N9UYB1-F1-model_v4 DUF433 domain-containing protein 1.001 4 66

Map