F236466

General Info

Members Datasets Scaffolds Average Seq Length
161 123 322 394

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100268578|Ga0070679_1002685781
Length 420
Sequence MPTTSREFARVVSRPWAGPFAFFVLLAAGLVLAAPARAHTLSESLSAWRIDGDTVRLQFTVPDLEAKRVSPSGKDLPSSAQLGQYVAARVGASAGNQKCPLIEGPRALAASTGYYRYDLVFRCPTTNDIKIHSAAFYDLVRTHTNFARIEDNEGRFFEQILTQDHQEVPASGSSEGNGLENAGLLTYIGLGVMHIFTGIDHMSFMLGLVLISRRVRDLLFVVTGFTLGHSLTLALAVTGVLRPEGQYIDALVALTIALIGAENIGDGTHRPLPVAIGLGAILFVMALGRYFGLGVTLPTLLLVGGGIFAVSYLMLTGQMRDAGRVRLLVTLVFGLIHGFGFASNLLEMRLPTHRLAELLVGFNLGVEIGQVTVVLGALLIAWLLVRARLSIPRPLFTDIAAAFLVGEGLCWFVERSVTLG

Samples

Sample ID Description Type Environment
1 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
22 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
23 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
24 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
25 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
26 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
50 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
51 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
52 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
53 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
54 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
55 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
56 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
57 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
59 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
60 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
61 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
64 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
65 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
66 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
70 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
71 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
72 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
73 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
74 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
79 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
80 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
81 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
82 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
83 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
84 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
85 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
88 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
89 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
90 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
91 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
92 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
93 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
94 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
95 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
96 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
97 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
98 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
99 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
100 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
101 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
102 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
103 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
104 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
105 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
106 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
107 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
108 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
109 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
110 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
111 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
112 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
113 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
114 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
115 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
116 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
117 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
118 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
119 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
120 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
121 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
122 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
123 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.76
Metatranscriptomes 1.24
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.21
Nodule 0
Rhizoplane 2.48
Rhizosphere 84.47
Stem 0
Stem Tuber 0
Unclassified 4.35

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070679_100268578 3300005530 Bacteria 1660
2 JGI24739J22299_10000995 3300001989 Bacteria 10557
3 JGI24737J22298_10000202 3300001990 Bacteria 19469
4 JGI24735J21928_10000056 3300002067 Bacteria 48409
5 JGI24738J21930_10001244 3300002075 Bacteria 7160
6 rootH2_10113239 3300003320 Bacteria 9929
7 Ga0070658_10013016 3300005327 Bacteria 6677
8 Ga0070711_100048230 3300005439 Bacteria 2911
9 Ga0070672_100219550 3300005543 Bacteria 1594
10 Ga0070665_100006313 3300005548 Bacteria 12099
11 Ga0070665_100036447 3300005548 Bacteria 4947
12 Ga0068855_100000681 3300005563 Bacteria 41540
13 Ga0068857_100018418 3300005577 Bacteria 6127
14 Ga0068856_100000648 3300005614 Bacteria 37715
15 Ga0068859_100006768 3300005617 Bacteria 11641
16 Ga0068858_100000361 3300005842 Bacteria 48022
17 Ga0068858_100130553 3300005842 Bacteria 2355
18 Ga0081455_10000004 3300005937 Bacteria 339321
19 Ga0097620_100006768 3300006931 Bacteria 11641
20 Ga0099794_10040697 3300007265 Bacteria 2211
21 Ga0105240_10000220 3300009093 Bacteria 115299
22 Ga0105240_10002678 3300009093 Bacteria 28344
23 Ga0105240_10027009 3300009093 Bacteria 7525
24 Ga0105240_10044175 3300009093 Bacteria 5665
25 Ga0105240_10087892 3300009093 Bacteria 3804
26 Ga0105245_10011268 3300009098 Bacteria 7785
27 Ga0105248_10003048 3300009177 Bacteria 18589
28 Ga0105248_10007448 3300009177 Bacteria 12010
29 Ga0105237_10000099 3300009545 Bacteria 120098
30 Ga0105237_10002797 3300009545 Bacteria 21198
31 Ga0105237_10217095 3300009545 Bacteria 1912
32 Ga0105249_10047568 3300009553 Bacteria 3909
33 Ga0099796_10002970 3300010159 Bacteria 3842
34 Ga0105239_10000111 3300010375 Bacteria 115283
35 Ga0157374_10144667 3300013296 Bacteria 2309
36 Ga0157378_10140309 3300013297 Bacteria 2244
37 Ga0157372_10003629 3300013307 Bacteria 16603
38 Ga0157372_10159087 3300013307 Bacteria 2610
39 Ga0157372_10255616 3300013307 Bacteria 2034
40 Ga0207647_10000846 3300025904 Bacteria 23748
41 Ga0207705_10034930 3300025909 Bacteria 3596
42 Ga0207695_10000213 3300025913 Bacteria 155843
43 Ga0207695_10006989 3300025913 Bacteria 14487
44 Ga0207695_10007412 3300025913 Bacteria 13974
45 Ga0207695_10060971 3300025913 Bacteria 3901
46 Ga0207671_10000704 3300025914 Bacteria 43043
47 Ga0207671_10011882 3300025914 Bacteria 7043
48 Ga0207663_10073396 3300025916 Bacteria 2214
49 Ga0207687_10028159 3300025927 Bacteria 3774
50 Ga0207706_10004221 3300025933 Bacteria 13532
51 Ga0207665_10128895 3300025939 Unclassified 1794
52 Ga0207711_10003574 3300025941 Bacteria 13448
53 Ga0207711_10063416 3300025941 Bacteria 3190
54 Ga0207689_10146985 3300025942 Bacteria 1942
55 Ga0207667_10005525 3300025949 Bacteria 15426
56 Ga0207712_10047785 3300025961 Bacteria 2973
57 Ga0207703_10000467 3300026035 Bacteria 42324
58 Ga0207639_10089490 3300026041 Bacteria 2460
59 Ga0207702_10000746 3300026078 Bacteria 34768
60 Ga0207674_10006300 3300026116 Bacteria 13985
61 Ga0207675_100081947 3300026118 Unclassified 3025
62 Ga0209981_1001810 3300027378 Bacteria 2711
63 Ga0209999_1004265 3300027543 Unclassified 2573
64 Ga0268266_10005281 3300028379 Bacteria 12128
65 Ga0268266_10009023 3300028379 Bacteria 8815
66 Ga0265319_1019087 3300028563 Bacteria 2568
67 Ga0265334_10000127 3300028573 Bacteria 48527
68 Ga0265334_10005266 3300028573 Bacteria 5662
69 Ga0265318_10000024 3300028577 Bacteria 159801
70 Ga0265318_10000940 3300028577 Bacteria 18811
71 Ga0265318_10009069 3300028577 Bacteria 4396
72 Ga0265318_10058137 3300028577 Bacteria 1444
73 Ga0265336_10000237 3300028666 Bacteria 39380
74 Ga0307517_10086794 3300028786 Bacteria 2607
75 Ga0265338_10003059 3300028800 Bacteria 24044
76 Ga0265338_10013338 3300028800 Bacteria 9284
77 Ga0265338_10037189 3300028800 Bacteria 4640
78 Ga0265338_10074200 3300028800 Bacteria 2895
79 Ga0265338_10089545 3300028800 Bacteria 2549
80 Ga0265324_10007393 3300029957 Bacteria 4457
81 Ga0265324_10010349 3300029957 Bacteria 3601
82 Ga0307511_10000702 3300030521 Bacteria 35747
83 Ga0265765_1001467 3300030879 Unclassified 2164
84 Ga0265760_10000080 3300031090 Bacteria 24834
85 Ga0265330_10003194 3300031235 Bacteria 8649
86 Ga0265328_10032408 3300031239 Bacteria 1939
87 Ga0265320_10007194 3300031240 Bacteria 6930
88 Ga0265320_10017262 3300031240 Bacteria 4014
89 Ga0265325_10006227 3300031241 Bacteria 7273
90 Ga0265329_10005295 3300031242 Bacteria 5230
91 Ga0265329_10031534 3300031242 Bacteria 1721
92 Ga0265340_10067179 3300031247 Bacteria 1704
93 Ga0265339_10092036 3300031249 Bacteria 1588
94 Ga0265331_10006356 3300031250 Bacteria 6992
95 Ga0265327_10002198 3300031251 Bacteria 21377
96 Ga0265327_10002502 3300031251 Bacteria 19207
97 Ga0265327_10006715 3300031251 Bacteria 9106
98 Ga0265316_10046151 3300031344 Bacteria 3454
99 Ga0265316_10050148 3300031344 Bacteria 3284
100 Ga0307509_10000370 3300031507 Bacteria 75863
101 Ga0307509_10072701 3300031507 Bacteria 3582
102 Ga0265313_10001194 3300031595 Bacteria 24878
103 Ga0265313_10017645 3300031595 Bacteria 4043
104 Ga0265314_10002946 3300031711 Bacteria 16863
105 Ga0265314_10129761 3300031711 Bacteria 1574
106 Ga0265342_10056301 3300031712 Bacteria 2331
107 Ga0307516_10014205 3300031730 Bacteria 8436
108 Ga0373953_0007951 3300035117 Bacteria 3578
109 Ga0373937_0012190 3300036401 Bacteria 7549
110 Ga0373937_0223181 3300036401 Bacteria 1774
111 Ga0373925_0000003 3300037068 Bacteria 362401
112 Ga0395900_0090365 3300037418 Bacteria 3147
113 Ga0439455_0033384 3300042012 Bacteria 1290
114 Ga0439458_0000446 3300042157 Bacteria 10419
115 Ga0466972_0018247 3300044658 Bacteria 3507
116 Ga0466966_0044690 3300044684 Bacteria 2835
117 Ga0466966_0203802 3300044684 Bacteria 1196
118 Ga0466963_0013552 3300044694 Bacteria 5007
119 Ga0466964_0032502 3300044706 Bacteria 2074
120 Ga0466971_0022171 3300044719 Bacteria 2828
121 Ga0466960_0015884 3300044901 Bacteria 3254
122 Ga0466959_0003019 3300045049 Bacteria 10872
123 Ga0466959_0006883 3300045049 Bacteria 7934
124 Ga0495638_0010465 3300046460 Bacteria 6434
125 Ga0495605_0014651 3300046474 Bacteria 4286
126 Ga0495584_0014467 3300046491 Bacteria 4020
127 Ga0495607_0000689 3300046501 Bacteria 32572
128 Ga0495616_0001300 3300046513 Bacteria 17491
129 Ga0495637_0001003 3300046520 Bacteria 17819
130 Ga0495609_0000046 3300046538 Bacteria 158102
131 Ga0495597_0038311 3300046542 Unclassified 2149
132 Ga0495668_0028646 3300046616 Unclassified 3150
133 Ga0495661_0000713 3300046665 Bacteria 32843
134 Ga0495613_0000325 3300046689 Bacteria 42892
135 Ga0495589_0000109 3300046794 Bacteria 78274
136 Ga0495687_000008 3300047443 Bacteria 546666
137 Ga0495677_0000008 3300047445 Bacteria 175183
138 Ga0495686_0023241 3300047472 Bacteria 4091
139 Ga0495626_0001702 3300048091 Bacteria 16872
140 Ga0496100_0060315 3300048903 Bacteria 2496
141 Ga0496104_0006994 3300048907 Bacteria 9951
142 Ga0496114_0005416 3300048917 Bacteria 9980
143 Ga0496115_0008904 3300048918 Bacteria 7441
144 Ga0496117_0029248 3300048920 Bacteria 4251
145 Ga0496118_0006175 3300048921 Bacteria 13276
146 Ga0496121_0000067 3300048924 Bacteria 261543
147 Ga0496126_0001661 3300048929 Bacteria 33406
148 Ga0496126_0224955 3300048929 Bacteria 1574
149 Ga0501032_0085355 3300049569 Bacteria 2099
150 Ga0500643_001589 3300053087 Bacteria 12847
151 Ga0500647_0007622 3300053091 Bacteria 4662
152 Ga0500651_0007176 3300053093 Bacteria 6486
153 Ga0500641_0053343 3300053096 Unclassified 1669
154 Ga0500572_000430 3300053111 Bacteria 14777
155 Ga0500655_000002 3300053133 Bacteria 116051
156 Ga0500559_0000001 3300053136 Bacteria 325464
157 Ga0500577_0047031 3300053142 Bacteria 1602
158 Ga0500622_0003150 3300053156 Bacteria 11294
159 Ga0500570_000028 3300053724 Bacteria 36221
160 Ga0501082_0003527 3300060353 Bacteria 13660
161 Ga0466962_0013070 3300061719 Bacteria 3993
162 Ga0070679_100268578
163 JGI24739J22299_10000995
164 JGI24737J22298_10000202
165 JGI24735J21928_10000056
166 JGI24738J21930_10001244
167 rootH2_10113239
168 Ga0070658_10013016
169 Ga0070711_100048230
170 Ga0070672_100219550
171 Ga0070665_100006313
172 Ga0070665_100036447
173 Ga0068855_100000681
174 Ga0068857_100018418
175 Ga0068856_100000648
176 Ga0068859_100006768
177 Ga0068858_100000361
178 Ga0068858_100130553
179 Ga0081455_10000004
180 Ga0097620_100006768
181 Ga0099794_10040697
182 Ga0105240_10000220
183 Ga0105240_10002678
184 Ga0105240_10027009
185 Ga0105240_10044175
186 Ga0105240_10087892
187 Ga0105245_10011268
188 Ga0105248_10003048
189 Ga0105248_10007448
190 Ga0105237_10000099
191 Ga0105237_10002797
192 Ga0105237_10217095
193 Ga0105249_10047568
194 Ga0099796_10002970
195 Ga0105239_10000111
196 Ga0157374_10144667
197 Ga0157378_10140309
198 Ga0157372_10003629
199 Ga0157372_10159087
200 Ga0157372_10255616
201 Ga0207647_10000846
202 Ga0207705_10034930
203 Ga0207695_10000213
204 Ga0207695_10006989
205 Ga0207695_10007412
206 Ga0207695_10060971
207 Ga0207671_10000704
208 Ga0207671_10011882
209 Ga0207663_10073396
210 Ga0207687_10028159
211 Ga0207706_10004221
212 Ga0207665_10128895
213 Ga0207711_10003574
214 Ga0207711_10063416
215 Ga0207689_10146985
216 Ga0207667_10005525
217 Ga0207712_10047785
218 Ga0207703_10000467
219 Ga0207639_10089490
220 Ga0207702_10000746
221 Ga0207674_10006300
222 Ga0207675_100081947
223 Ga0209981_1001810
224 Ga0209999_1004265
225 Ga0268266_10005281
226 Ga0268266_10009023
227 Ga0265319_1019087
228 Ga0265334_10000127
229 Ga0265334_10005266
230 Ga0265318_10000024
231 Ga0265318_10000940
232 Ga0265318_10009069
233 Ga0265318_10058137
234 Ga0265336_10000237
235 Ga0307517_10086794
236 Ga0265338_10003059
237 Ga0265338_10013338
238 Ga0265338_10037189
239 Ga0265338_10074200
240 Ga0265338_10089545
241 Ga0265324_10007393
242 Ga0265324_10010349
243 Ga0307511_10000702
244 Ga0265765_1001467
245 Ga0265760_10000080
246 Ga0265330_10003194
247 Ga0265328_10032408
248 Ga0265320_10007194
249 Ga0265320_10017262
250 Ga0265325_10006227
251 Ga0265329_10005295
252 Ga0265329_10031534
253 Ga0265340_10067179
254 Ga0265339_10092036
255 Ga0265331_10006356
256 Ga0265327_10002198
257 Ga0265327_10002502
258 Ga0265327_10006715
259 Ga0265316_10046151
260 Ga0265316_10050148
261 Ga0307509_10000370
262 Ga0307509_10072701
263 Ga0265313_10001194
264 Ga0265313_10017645
265 Ga0265314_10002946
266 Ga0265314_10129761
267 Ga0265342_10056301
268 Ga0307516_10014205
269 Ga0373953_0007951
270 Ga0373937_0012190
271 Ga0373937_0223181
272 Ga0373925_0000003
273 Ga0395900_0090365
274 Ga0439455_0033384
275 Ga0439458_0000446
276 Ga0466972_0018247
277 Ga0466966_0044690
278 Ga0466966_0203802
279 Ga0466963_0013552
280 Ga0466964_0032502
281 Ga0466971_0022171
282 Ga0466960_0015884
283 Ga0466959_0003019
284 Ga0466959_0006883
285 Ga0495638_0010465
286 Ga0495605_0014651
287 Ga0495584_0014467
288 Ga0495607_0000689
289 Ga0495616_0001300
290 Ga0495637_0001003
291 Ga0495609_0000046
292 Ga0495597_0038311
293 Ga0495668_0028646
294 Ga0495661_0000713
295 Ga0495613_0000325
296 Ga0495589_0000109
297 Ga0495687_000008
298 Ga0495677_0000008
299 Ga0495686_0023241
300 Ga0495626_0001702
301 Ga0496100_0060315
302 Ga0496104_0006994
303 Ga0496114_0005416
304 Ga0496115_0008904
305 Ga0496117_0029248
306 Ga0496118_0006175
307 Ga0496121_0000067
308 Ga0496126_0001661
309 Ga0496126_0224955
310 Ga0501032_0085355
311 Ga0500643_001589
312 Ga0500647_0007622
313 Ga0500651_0007176
314 Ga0500641_0053343
315 Ga0500572_000430
316 Ga0500655_000002
317 Ga0500559_0000001
318 Ga0500577_0047031
319 Ga0500622_0003150
320 Ga0500570_000028
321 Ga0501082_0003527
322 Ga0466962_0013070

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13795

HupE_UreJ_2

HupE / UreJ protein

187

301

0.88

PF13795

HupE_UreJ_2

HupE / UreJ protein

297

388

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ezw-assembly2.cif.gz_B structure of apo zrga deletion 124-184 from vibrio cholerae 0.7124 31 155
8f1b-assembly4.cif.gz_D structure of zinc-bound zrga deletion 124-184 from vibrio cholerae 0.6963 26 155
8f1b-assembly3.cif.gz_C structure of zinc-bound zrga deletion 124-184 from vibrio cholerae 0.6949 25 155
8ezw-assembly6.cif.gz_F structure of apo zrga deletion 124-184 from vibrio cholerae 0.681 31 155
8ezw-assembly2.cif.gz_B structure of apo zrga deletion 124-184 from vibrio cholerae 0.6751 31 155
ID Description Score Start End Superfamily
af_A0A0R0L9U5_1_180_3.30.420.110 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;MutS, connector domain 0.6765 21 52 3.30.420.110
af_H2KYP7_108_242_3.30.420.510 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5; 0.6671 28 47 3.30.420.510
af_A0A2R8QLV9_249_323_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.6557 33 120 2.60.40.10
af_A0A2R8QLV9_249_323_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.6346 33 120 2.60.40.10
af_O62361_1_101_3.40.1000.30 Alpha Beta;3-Layer(aba) Sandwich;Protein Transport Mog1p; Chain A; 0.6296 27 46 3.40.1000.30
ID Description Score Start End GO Terms
AF-A0A559JZX4-F1-model_v4 HupE/UreJ family protein 0.9326 169 399 GO:0016020
AF-A0A6B1HNI1-F1-model_v4 HupE/UreJ family protein 0.9291 169 399 GO:0016020
AF-A0A1Z8M8C5-F1-model_v4 Photosynthesis system II assembly factor Ycf48/Hcf136-like domain-containing protein 0.9289 169 404 GO:0009523
GO:0015979
AF-A0A7X4YUL1-F1-model_v4 HupE/UreJ family protein 0.919 167 399 GO:0016020
AF-A0A1F9F440-F1-model_v4 HupE / UreJ protein 0.9176 170 399 GO:0016020

Map