F235620

General Info

Members Datasets Scaffolds Average Seq Length
160 88 320 325

Family's Representative Sequence

Representative Sequence 3300049586|Ga0501070_0006442|Ga0501070_0006442_1519_2652
Length 377
Sequence VSIQVRNVSKSFGDFHALVDVSVDIEPGQLTAVLGPSGGGKSTLLRIIAGLETADRGQVLIDGVDVTHVPARQRGIGFVFQHYAAFTHMTVWDNVAFGLKIAKTPKPKIKARVAELLELVHLDGLASRFPSELSGGQRQRMALARALAVEPGLLLLDEPFGALDVKVRQELRDWLRRLHDEVHTTTIFVTHDQEEAMEIADQIIVINHGRVEQAGNPTKLYDRPANDFVMGFLGPVTTLAGQLVRPHDIRVEKTKRDDAVSATVQRLVSLGFETRLVAAPDDGAEPVTVQLTRNQIRELALEVDDTVYLHAPSGSGRQHRNREQDQVVGEVGEDRPTDSAALLERAGEQVAERHGHHEREAVVEVVGLAHREAQRER

Samples

Sample ID Description Type Environment
1 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
7 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
8 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
9 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
10 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
11 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
12 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
13 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
14 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
15 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
16 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
17 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
18 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
19 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
20 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
21 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
22 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
23 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
29 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
30 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
31 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
32 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
33 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
34 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
35 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
36 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
37 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
38 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
39 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
40 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
41 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
42 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
43 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
44 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
45 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
46 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
47 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
48 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
49 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
50 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
51 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
52 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
53 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
54 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
55 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
56 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
57 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
58 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
59 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
60 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
61 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
62 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
63 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
65 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
66 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
75 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
76 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
77 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
78 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
81 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
82 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
83 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
84 2508501039 Frankia saprophytica CN3 Isolate Nodule
85 2675902999 Frankia asymbiotica NRRL B-16386 Isolate Nodule
86 2687453737 Frankia sp. BMG5.36 Isolate Nodule
87 2773857921 Frankia asymbiotica NRRL B-16386 Isolate Nodule
88 2946024296 Arthrobacter woluwensis W4I2 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.88
Metatranscriptomes 0
Isolates 3.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 2.5
Rhizoplane 1.88
Rhizosphere 83.12
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501070_0006442 3300049586 Bacteria 9995
2 JGI24735J21928_10007715 3300002067 Bacteria 3498
3 Ga0070683_100098691 3300005329 Bacteria 2749
4 Ga0070688_100318208 3300005365 Bacteria 1130
5 Ga0070714_100139814 3300005435 Bacteria 2172
6 Ga0070665_100060800 3300005548 Bacteria 3787
7 Ga0068855_100040479 3300005563 Bacteria 5531
8 Ga0068852_100131749 3300005616 Bacteria 2303
9 Ga0081540_1001780 3300005983 Bacteria 18068
10 Ga0081539_10013037 3300005985 Bacteria 6306
11 Ga0075433_10027395 3300006852 Bacteria 4833
12 Ga0114129_10288861 3300009147 Bacteria 2189
13 Ga0105243_10139838 3300009148 Bacteria 2064
14 Ga0105241_10278992 3300009174 Bacteria 1426
15 Ga0105237_10467769 3300009545 Bacteria 1267
16 Ga0105239_10763479 3300010375 Bacteria 1107
17 Ga0157372_10084739 3300013307 Bacteria 3593
18 Ga0157372_10171780 3300013307 Bacteria 2508
19 Ga0157375_10061458 3300013308 Bacteria 3730
20 Ga0157380_10036449 3300014326 Bacteria 3805
21 Ga0157379_10003350 3300014968 Bacteria 13580
22 Ga0157379_10004216 3300014968 Bacteria 12277
23 Ga0213876_10004244 3300021384 Bacteria 8041
24 Ga0213876_10016785 3300021384 Bacteria 3868
25 Ga0213875_10032514 3300021388 Bacteria 2465
26 Ga0213875_10034197 3300021388 Bacteria 2400
27 Ga0213875_10054087 3300021388 Bacteria 1880
28 Ga0207671_10076823 3300025914 Bacteria 2499
29 Ga0207671_10080631 3300025914 Bacteria 2440
30 Ga0207711_10098899 3300025941 Bacteria 2578
31 Ga0207661_10071770 3300025944 Bacteria 2831
32 Ga0207667_10006887 3300025949 Bacteria 13734
33 Ga0207698_10095757 3300026142 Bacteria 2444
34 Ga0265325_10016790 3300031241 Bacteria 4086
35 Ga0265339_10021750 3300031249 Bacteria 3725
36 Ga0265316_10059679 3300031344 Bacteria 2966
37 Ga0265313_10099139 3300031595 Bacteria 1295
38 Ga0316579_10000845 3300031691 Bacteria 10602
39 Ga0265314_10045022 3300031711 Bacteria 3122
40 Ga0265342_10069143 3300031712 Bacteria 2062
41 Ga0307413_10049078 3300031824 Bacteria 2528
42 Ga0307410_10064831 3300031852 Bacteria 2511
43 Ga0307406_10148273 3300031901 Bacteria 1670
44 Ga0307409_100169169 3300031995 Bacteria 1921
45 Ga0307409_100389404 3300031995 Bacteria 1328
46 Ga0307416_100035588 3300032002 Bacteria 3805
47 Ga0307415_100018349 3300032126 Bacteria 4222
48 Ga0373931_0144667 3300035691 Bacteria 1380
49 Ga0395899_0000614 3300037312 Bacteria 37099
50 Ga0395900_0024169 3300037418 Bacteria 6222
51 Ga0395900_0037823 3300037418 Bacteria 4975
52 Ga0395900_0131447 3300037418 Bacteria 2565
53 Ga0395898_0102391 3300037466 Bacteria 2749
54 Ga0436364_0072871 3300037853 Bacteria 3988
55 Ga0436364_0404664 3300037853 Bacteria 5999
56 Ga0436364_0438827 3300037853 Bacteria 5456
57 Ga0436364_1243741 3300037853 Bacteria 1801
58 Ga0436364_1367462 3300037853 Bacteria 5682
59 Ga0436365_0618768 3300039437 Bacteria 6664
60 Ga0436365_0851257 3300039437 Bacteria 18616
61 Ga0436365_0861691 3300039437 Bacteria 19086
62 Ga0436365_0982387 3300039437 Bacteria 2629
63 Ga0436365_1135686 3300039437 Bacteria 41937
64 Ga0436363_0158048 3300039450 Bacteria 1902
65 Ga0436363_0624775 3300039450 Bacteria 22345
66 Ga0436363_1074896 3300039450 Bacteria 4573
67 Ga0466966_0024719 3300044684 Bacteria 3930
68 Ga0466966_0074399 3300044684 Bacteria 2123
69 Ga0466961_0033147 3300044693 Bacteria 3319
70 Ga0466961_0055460 3300044693 Bacteria 2526
71 Ga0466961_0056552 3300044693 Bacteria 2500
72 Ga0466961_0113190 3300044693 Bacteria 1706
73 Ga0466963_0005098 3300044694 Bacteria 7676
74 Ga0466963_0021603 3300044694 Bacteria 4063
75 Ga0466963_0042706 3300044694 Bacteria 2978
76 Ga0466963_0120440 3300044694 Bacteria 1805
77 Ga0466963_0121683 3300044694 Bacteria 1797
78 Ga0466963_0226944 3300044694 Bacteria 1308
79 Ga0466964_0047329 3300044706 Bacteria 1755
80 Ga0466971_0007113 3300044719 Bacteria 4871
81 Ga0466971_0018678 3300044719 Bacteria 3073
82 Ga0466971_0135326 3300044719 Bacteria 1146
83 Ga0466970_0005327 3300044765 Bacteria 6378
84 Ga0466970_0044157 3300044765 Bacteria 2373
85 Ga0466970_0083392 3300044765 Bacteria 1730
86 Ga0466970_0200926 3300044765 Bacteria 1109
87 Ga0466957_0021079 3300044842 Bacteria 3838
88 Ga0466957_0024616 3300044842 Bacteria 3563
89 Ga0466957_0029293 3300044842 Bacteria 3282
90 Ga0466959_0013597 3300045049 Bacteria 5902
91 Ga0466959_0031383 3300045049 Bacteria 3932
92 Ga0466959_0031756 3300045049 Bacteria 3908
93 Ga0466959_0040333 3300045049 Bacteria 3449
94 Ga0466959_0044635 3300045049 Bacteria 3266
95 Ga0466959_0053670 3300045049 Bacteria 2946
96 Ga0466959_0073260 3300045049 Bacteria 2478
97 Ga0466959_0098952 3300045049 Bacteria 2089
98 Ga0466958_0004843 3300045836 Bacteria 7166
99 Ga0466958_0006583 3300045836 Bacteria 6334
100 Ga0466958_0007439 3300045836 Bacteria 6026
101 Ga0466958_0024931 3300045836 Bacteria 3522
102 Ga0466958_0025941 3300045836 Bacteria 3460
103 Ga0466958_0065396 3300045836 Bacteria 2219
104 Ga0466958_0084492 3300045836 Bacteria 1958
105 Ga0466958_0188560 3300045836 Bacteria 1310
106 Ga0466958_0213140 3300045836 Bacteria 1231
107 Ga0466967_0006470 3300045976 Bacteria 8295
108 Ga0466967_0028367 3300045976 Bacteria 4672
109 Ga0466967_0064908 3300045976 Bacteria 3248
110 Ga0466967_0079033 3300045976 Bacteria 2965
111 Ga0466967_0088713 3300045976 Bacteria 2807
112 Ga0466967_0226830 3300045976 Bacteria 1777
113 Ga0466967_0276182 3300045976 Bacteria 1611
114 Ga0466967_0280373 3300045976 Bacteria 1599
115 Ga0496100_0076797 3300048903 Bacteria 2244
116 Ga0496106_0303498 3300048909 Bacteria 1281
117 Ga0496115_0197076 3300048918 Bacteria 1664
118 Ga0496121_0022684 3300048924 Bacteria 6077
119 Ga0496125_0200267 3300048928 Bacteria 1308
120 Ga0501031_0008760 3300049568 Bacteria 6581
121 Ga0501032_0008446 3300049569 Bacteria 7507
122 Ga0501032_0056549 3300049569 Bacteria 2637
123 Ga0501033_0020102 3300049570 Bacteria 5048
124 Ga0501034_0075777 3300049571 Bacteria 3371
125 Ga0501037_0016012 3300049573 Bacteria 5519
126 Ga0501037_0057041 3300049573 Bacteria 2852
127 Ga0501038_0000215 3300049574 Bacteria 49658
128 Ga0501038_0003699 3300049574 Bacteria 14251
129 Ga0501039_0006201 3300049575 Bacteria 9076
130 Ga0501043_0009121 3300049579 Bacteria 7804
131 Ga0501043_0044773 3300049579 Bacteria 3479
132 Ga0501046_0023403 3300049580 Bacteria 5083
133 Ga0501047_0028151 3300049581 Bacteria 5416
134 Ga0501047_0117290 3300049581 Bacteria 2543
135 Ga0501048_0023388 3300049582 Bacteria 4516
136 Ga0501068_0113177 3300049584 Bacteria 1688
137 Ga0501069_0004030 3300049585 Bacteria 7582
138 Ga0501070_0002239 3300049586 Bacteria 16997
139 Ga0501070_0011880 3300049586 Bacteria 7354
140 Ga0501070_0033520 3300049586 Bacteria 4298
141 Ga0501070_0183785 3300049586 Bacteria 1720
142 Ga0501074_0007645 3300049590 Bacteria 7822
143 Ga0501080_0002780 3300049742 Bacteria 15372
144 Ga0501080_0017985 3300049742 Bacteria 6544
145 Ga0501080_0027234 3300049742 Bacteria 5316
146 Ga0501080_0210600 3300049742 Bacteria 1781
147 Ga0501035_0032313 3300049822 Bacteria 4762
148 Ga0501044_0055617 3300049823 Bacteria 4064
149 Ga0501044_0064273 3300049823 Bacteria 3747
150 Ga0501045_0018120 3300049824 Bacteria 5004
151 nmdc:mga05p37_76320_c1 3300050507 Bacteria 4126
152 Ga0501082_0073126 3300060353 Bacteria 2953
153 Ga0466962_0021723 3300061719 Bacteria 3080
154 Ga0466962_0022485 3300061719 Bacteria 3029
155 Ga0466962_0050288 3300061719 Bacteria 1992
156 2508677343 2508501039 Bacteria 9978592
157 2676200208 2675902999 Bacteria 9438463
158 2689960222 2687453737 Bacteria 11203906
159 2774844786 2773857921 Bacteria 9435764
160 2946026932 2946024296 Bacteria 3508095
161 Ga0501070_0006442
162 JGI24735J21928_10007715
163 Ga0070683_100098691
164 Ga0070688_100318208
165 Ga0070714_100139814
166 Ga0070665_100060800
167 Ga0068855_100040479
168 Ga0068852_100131749
169 Ga0081540_1001780
170 Ga0081539_10013037
171 Ga0075433_10027395
172 Ga0114129_10288861
173 Ga0105243_10139838
174 Ga0105241_10278992
175 Ga0105237_10467769
176 Ga0105239_10763479
177 Ga0157372_10084739
178 Ga0157372_10171780
179 Ga0157375_10061458
180 Ga0157380_10036449
181 Ga0157379_10003350
182 Ga0157379_10004216
183 Ga0213876_10004244
184 Ga0213876_10016785
185 Ga0213875_10032514
186 Ga0213875_10034197
187 Ga0213875_10054087
188 Ga0207671_10076823
189 Ga0207671_10080631
190 Ga0207711_10098899
191 Ga0207661_10071770
192 Ga0207667_10006887
193 Ga0207698_10095757
194 Ga0265325_10016790
195 Ga0265339_10021750
196 Ga0265316_10059679
197 Ga0265313_10099139
198 Ga0316579_10000845
199 Ga0265314_10045022
200 Ga0265342_10069143
201 Ga0307413_10049078
202 Ga0307410_10064831
203 Ga0307406_10148273
204 Ga0307409_100169169
205 Ga0307409_100389404
206 Ga0307416_100035588
207 Ga0307415_100018349
208 Ga0373931_0144667
209 Ga0395899_0000614
210 Ga0395900_0024169
211 Ga0395900_0037823
212 Ga0395900_0131447
213 Ga0395898_0102391
214 Ga0436364_0072871
215 Ga0436364_0404664
216 Ga0436364_0438827
217 Ga0436364_1243741
218 Ga0436364_1367462
219 Ga0436365_0618768
220 Ga0436365_0851257
221 Ga0436365_0861691
222 Ga0436365_0982387
223 Ga0436365_1135686
224 Ga0436363_0158048
225 Ga0436363_0624775
226 Ga0436363_1074896
227 Ga0466966_0024719
228 Ga0466966_0074399
229 Ga0466961_0033147
230 Ga0466961_0055460
231 Ga0466961_0056552
232 Ga0466961_0113190
233 Ga0466963_0005098
234 Ga0466963_0021603
235 Ga0466963_0042706
236 Ga0466963_0120440
237 Ga0466963_0121683
238 Ga0466963_0226944
239 Ga0466964_0047329
240 Ga0466971_0007113
241 Ga0466971_0018678
242 Ga0466971_0135326
243 Ga0466970_0005327
244 Ga0466970_0044157
245 Ga0466970_0083392
246 Ga0466970_0200926
247 Ga0466957_0021079
248 Ga0466957_0024616
249 Ga0466957_0029293
250 Ga0466959_0013597
251 Ga0466959_0031383
252 Ga0466959_0031756
253 Ga0466959_0040333
254 Ga0466959_0044635
255 Ga0466959_0053670
256 Ga0466959_0073260
257 Ga0466959_0098952
258 Ga0466958_0004843
259 Ga0466958_0006583
260 Ga0466958_0007439
261 Ga0466958_0024931
262 Ga0466958_0025941
263 Ga0466958_0065396
264 Ga0466958_0084492
265 Ga0466958_0188560
266 Ga0466958_0213140
267 Ga0466967_0006470
268 Ga0466967_0028367
269 Ga0466967_0064908
270 Ga0466967_0079033
271 Ga0466967_0088713
272 Ga0466967_0226830
273 Ga0466967_0276182
274 Ga0466967_0280373
275 Ga0496100_0076797
276 Ga0496106_0303498
277 Ga0496115_0197076
278 Ga0496121_0022684
279 Ga0496125_0200267
280 Ga0501031_0008760
281 Ga0501032_0008446
282 Ga0501032_0056549
283 Ga0501033_0020102
284 Ga0501034_0075777
285 Ga0501037_0016012
286 Ga0501037_0057041
287 Ga0501038_0000215
288 Ga0501038_0003699
289 Ga0501039_0006201
290 Ga0501043_0009121
291 Ga0501043_0044773
292 Ga0501046_0023403
293 Ga0501047_0028151
294 Ga0501047_0117290
295 Ga0501048_0023388
296 Ga0501068_0113177
297 Ga0501069_0004030
298 Ga0501070_0002239
299 Ga0501070_0011880
300 Ga0501070_0033520
301 Ga0501070_0183785
302 Ga0501074_0007645
303 Ga0501080_0002780
304 Ga0501080_0017985
305 Ga0501080_0027234
306 Ga0501080_0210600
307 Ga0501035_0032313
308 Ga0501044_0055617
309 Ga0501044_0064273
310 Ga0501045_0018120
311 nmdc:mga05p37_76320_c1
312 Ga0501082_0073126
313 Ga0466962_0021723
314 Ga0466962_0022485
315 Ga0466962_0050288
316 2508677343
317 2676200208
318 2689960222
319 2774844786
320 2946026932

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

18

161

0.98

PF08402

TOBE_2

TOBE domain

243

317

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2onk-assembly1.cif.gz_B abc transporter modbc in complex with its binding protein moda 0.9577 1 233
4yer-assembly1.cif.gz_B crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9521 3 222
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.9447 2 216
4yms-assembly1.cif.gz_A crystal structure of an amino acid abc transporter 0.939 3 233
4u00-assembly1.cif.gz_A crystal structure of ttha1159 in complex with adp 0.9369 1 233
ID Description Score Start End Superfamily
af_Q58762_1_229_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9737 3 234 3.40.50.300
af_P33360_1_239_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9731 3 234 3.40.50.300
af_P77795_1_218_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9714 2 216 3.40.50.300
af_Q2G089_1_236_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9708 3 232 3.40.50.300
af_O69724_1_242_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9647 3 235 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2H6F2F2-F1-model_v4 Sulfate/thiosulfate import ATP-binding protein CysA (EC 3.6.3.25) 0.9772 3 233 GO:0005524
GO:0005886
GO:0015408
GO:0016887
AF-A0A7J3BDG1-F1-model_v4 Molybdate/tungstate import ATP-binding protein WtpC (EC 7.3.2.6) 0.9741 3 224 GO:0005524
GO:0016887
AF-A0A6N6XD81-F1-model_v4 deleted 0.9739 3 234
AF-A0A7C3NV77-F1-model_v4 ABC transporter ATP-binding protein 0.9734 1 217 GO:0005524
GO:0005886
GO:0015408
GO:0016887
AF-A0A2N6DB41-F1-model_v4 Glycine betaine ABC transporter ATP-binding protein 0.9733 3 234 GO:0005524
GO:0016020
GO:0016887
GO:0031460

Map