F234995

General Info

Members Datasets Scaffolds Average Seq Length
160 103 320 766

Family's Representative Sequence

Representative Sequence 3300032002|Ga0307416_100030351|Ga0307416_1000303513
Length 789
Sequence VSLPEYRRKRDPKVTPEPFEGGKRGKMPARGRPPIFVVQRHDARRLHYDFRLERNGALASWAVPKGVPLEPGGRALAVHVEDHPLEYAKFHGEIPKGQYGAGTVEIWDSGTYDLLEEKRNGQLTVRLHGKRLDGTWSVVPAHLDGKEENWLLIKRRDGEDGAEPPRTYTPMLSTLADALPRSDDWLFEVKWDGYRAIAYVRGGEASLVSRNGNDLTTRFPQVAKEIVKATKSPHAVLDGEACALDDEGKASFSVMQQGSGPLVFYAFDLLELDGEPLVDLPLAERRRRLEKLLDKGNRTVRISEAFDDGEALKAAAEEQGLEGVIAKRAESRYVQGKRTRDWLKIKTHGRQEFVVVGYTAGSGRRVGSFGSLVLAVNDEDGLRYVGNVGTGFDDAEIRRLLKLMKPLRRDTSPLKVVPKMPRVRKGDVTWIEPVLVAEVEFSEWTHDHHIRQPSYKGLREDKAPPDVVEEAPAQEAPEGAPPVDELPSVLRKGKRELRLSNLDKVFWPDGDITKGDLLRYYRAIAPVLVPHLKDRPFTMRRYPDGAYGEAFFQKDAPSHMPDWIPTFRALVSTRERPAAKKWVNFPLVNDELALLWMVNMGCIDMNTWYSRVDKPDRADFVLFDLDPTPEVPWGQVVEVALILHELLDRLGLQSFPKTSGGKGFHVLVPLDRRSTFEDTRQFSEIVAGAIARAHPKLATTEWAKARRRGVLIDANQNGEGKTIASVYSVRPKPGAPVSTPLRWDEVNDKLNPSIYSMPVVLERVEQFGDLYAPMLTTRQSLSKALAALG

Samples

Sample ID Description Type Environment
1 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
24 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
25 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
26 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
28 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
36 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
37 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
38 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
39 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
40 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
41 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
42 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
43 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
44 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
45 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
46 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
47 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
48 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
49 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
52 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
53 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
54 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
55 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
56 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
57 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
58 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
59 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
60 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
61 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
62 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
63 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
64 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
65 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
66 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
67 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
68 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
69 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
70 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
71 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
72 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
73 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
74 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
75 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
76 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
77 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
78 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
79 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
80 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
81 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
82 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
83 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
84 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
85 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
86 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
87 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
88 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
89 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
90 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
91 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
92 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
93 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
94 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
95 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
96 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
99 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
100 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
101 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
102 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
103 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.75
Metatranscriptomes 1.25
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 7.5
Rhizosphere 92.5
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307416_100030351 3300032002 Bacteria 4055
2 Ga0070658_10058639 3300005327 Bacteria 3133
3 Ga0070683_100020579 3300005329 Bacteria 5871
4 Ga0070670_100001416 3300005331 Bacteria 19282
5 Ga0070680_100005196 3300005336 Bacteria 9853
6 Ga0070680_100016987 3300005336 Bacteria 5730
7 Ga0070682_100009960 3300005337 Bacteria 5384
8 Ga0070660_100002486 3300005339 Bacteria 12647
9 Ga0070661_100015581 3300005344 Bacteria 5365
10 Ga0070661_100029395 3300005344 Bacteria 3966
11 Ga0070714_100027646 3300005435 Bacteria 4699
12 Ga0070713_100035497 3300005436 Bacteria 4014
13 Ga0070681_10006125 3300005458 Bacteria 11675
14 Ga0070681_10059556 3300005458 Bacteria 3798
15 Ga0070707_100001488 3300005468 Bacteria 22852
16 Ga0070679_100008687 3300005530 Bacteria 9577
17 Ga0070679_100028314 3300005530 Bacteria 5523
18 Ga0070679_100033041 3300005530 Bacteria 5120
19 Ga0070665_100062480 3300005548 Bacteria 3734
20 Ga0068855_100009354 3300005563 Bacteria 11832
21 Ga0068857_100038476 3300005577 Bacteria 4236
22 Ga0068857_100061752 3300005577 Bacteria 3329
23 Ga0068854_100046060 3300005578 Bacteria 3104
24 Ga0068856_100067086 3300005614 Bacteria 3545
25 Ga0068852_100017633 3300005616 Bacteria 5607
26 Ga0081455_10007369 3300005937 Bacteria 11598
27 Ga0081538_10000254 3300005981 Bacteria 60558
28 Ga0105240_10085038 3300009093 Bacteria 3877
29 Ga0157370_10002516 3300013104 Bacteria 22041
30 Ga0157370_10014394 3300013104 Bacteria 8088
31 Ga0157370_10066287 3300013104 Bacteria 3415
32 Ga0157369_10002737 3300013105 Bacteria 21049
33 Ga0157369_10005843 3300013105 Bacteria 14298
34 Ga0157369_10028873 3300013105 Bacteria 6136
35 Ga0157369_10032284 3300013105 Bacteria 5760
36 Ga0157372_10070771 3300013307 Bacteria 3926
37 Ga0157372_10110069 3300013307 Bacteria 3155
38 Ga0206353_10423363 3300020082 Bacteria 10620
39 Ga0224712_10011884 3300022467 Bacteria 2717
40 Ga0207707_10036454 3300025912 Bacteria 4299
41 Ga0207657_10000388 3300025919 Bacteria 46370
42 Ga0207657_10001654 3300025919 Bacteria 24052
43 Ga0207657_10006020 3300025919 Bacteria 12619
44 Ga0207657_10007247 3300025919 Bacteria 11388
45 Ga0207657_10052233 3300025919 Bacteria 3548
46 Ga0207657_10054043 3300025919 Bacteria 3475
47 Ga0207652_10015416 3300025921 Bacteria 6209
48 Ga0207652_10074512 3300025921 Bacteria 2956
49 Ga0207646_10008898 3300025922 Bacteria 10001
50 Ga0207650_10001970 3300025925 Bacteria 14402
51 Ga0207664_10005221 3300025929 Bacteria 8859
52 Ga0207674_10019068 3300026116 Bacteria 7435
53 Ga0207674_10047661 3300026116 Bacteria 4391
54 Ga0265338_10009164 3300028800 Bacteria 11875
55 Ga0265338_10032951 3300028800 Bacteria 5041
56 Ga0265325_10018834 3300031241 Bacteria 3826
57 Ga0307408_100026401 3300031548 Bacteria 3990
58 Ga0265314_10005023 3300031711 Bacteria 12056
59 Ga0307406_10039440 3300031901 Bacteria 2930
60 Ga0373944_0001142 3300035089 Bacteria 6615
61 Ga0373943_0001097 3300035170 Bacteria 12064
62 Ga0373935_0001485 3300035692 Bacteria 13029
63 Ga0373935_0009041 3300035692 Bacteria 5960
64 Ga0373947_0000716 3300035725 Bacteria 19733
65 Ga0373925_0004218 3300037068 Bacteria 10914
66 Ga0373925_0025285 3300037068 Bacteria 4337
67 Ga0395899_0002355 3300037312 Bacteria 15381
68 Ga0395899_0003130 3300037312 Bacteria 13165
69 Ga0395899_0003713 3300037312 Bacteria 12079
70 Ga0395900_0005758 3300037418 Bacteria 12951
71 Ga0395900_0014115 3300037418 Bacteria 8156
72 Ga0395898_0000824 3300037466 Bacteria 51781
73 Ga0395905_0056986 3300037471 Bacteria 3654
74 Ga0395901_0000244 3300038443 Bacteria 67684
75 Ga0395901_0001584 3300038443 Bacteria 23533
76 Ga0395901_0002069 3300038443 Bacteria 20589
77 Ga0395901_0007695 3300038443 Bacteria 10870
78 Ga0466961_0041216 3300044693 Bacteria 2960
79 Ga0466963_0004157 3300044694 Bacteria 8376
80 Ga0466963_0005784 3300044694 Bacteria 7273
81 Ga0466963_0030443 3300044694 Bacteria 3483
82 Ga0466964_0001186 3300044706 Bacteria 8792
83 Ga0466957_0002461 3300044842 Bacteria 9945
84 Ga0466959_0001752 3300045049 Bacteria 13523
85 Ga0466959_0008601 3300045049 Bacteria 7226
86 Ga0466958_0004393 3300045836 Bacteria 7438
87 Ga0466958_0007682 3300045836 Bacteria 5946
88 Ga0466958_0030080 3300045836 Bacteria 3223
89 Ga0466958_0047285 3300045836 Bacteria 2598
90 Ga0466967_0000861 3300045976 Bacteria 16138
91 Ga0466967_0001304 3300045976 Bacteria 14235
92 Ga0466967_0002966 3300045976 Bacteria 10848
93 Ga0466967_0009669 3300045976 Bacteria 7172
94 Ga0466967_0020710 3300045976 Bacteria 5323
95 Ga0466967_0067682 3300045976 Bacteria 3186
96 Ga0466967_0068513 3300045976 Bacteria 3169
97 Ga0495629_0012731 3300046459 Bacteria 6091
98 Ga0495629_0067462 3300046459 Bacteria 2496
99 Ga0495641_0003459 3300046461 Bacteria 11806
100 Ga0495641_0024543 3300046461 Bacteria 2974
101 Ga0495651_0025345 3300046462 Bacteria 4616
102 Ga0495651_0058106 3300046462 Bacteria 2968
103 Ga0495653_0012441 3300046463 Bacteria 6948
104 Ga0495653_0034131 3300046463 Bacteria 4027
105 Ga0495582_0000276 3300046473 Bacteria 28706
106 Ga0495639_0000416 3300046475 Bacteria 20358
107 Ga0495662_0011608 3300046476 Bacteria 4306
108 Ga0495607_0008864 3300046501 Bacteria 6851
109 Ga0495608_0028372 3300046511 Bacteria 3804
110 Ga0495630_0001315 3300046517 Bacteria 17081
111 Ga0495630_0010880 3300046517 Bacteria 6570
112 Ga0495644_0019606 3300046523 Bacteria 2582
113 Ga0495640_0004359 3300046533 Bacteria 11296
114 Ga0495667_0045245 3300046559 Bacteria 2915
115 Ga0495656_0001091 3300046615 Bacteria 8796
116 Ga0495634_0020646 3300046642 Bacteria 4668
117 Ga0495634_0044783 3300046642 Bacteria 2993
118 Ga0495635_0025855 3300046663 Bacteria 4089
119 Ga0495635_0058062 3300046663 Bacteria 2662
120 Ga0495647_0001278 3300046681 Bacteria 7761
121 Ga0495658_0002918 3300046683 Bacteria 8581
122 Ga0495613_0012891 3300046689 Bacteria 6212
123 Ga0495613_0027962 3300046689 Bacteria 4197
124 Ga0495624_0004610 3300046690 Bacteria 10051
125 Ga0495600_0007224 3300046809 Bacteria 6779
126 Ga0495581_0007163 3300047315 Bacteria 6457
127 Ga0495604_0040219 3300047317 Bacteria 3672
128 Ga0495674_0028499 3300047319 Bacteria 5090
129 Ga0495674_0038616 3300047319 Bacteria 4284
130 Ga0495676_0025170 3300047321 Bacteria 5142
131 Ga0495680_0006991 3300047322 Bacteria 10406
132 Ga0495680_0008719 3300047322 Bacteria 9189
133 Ga0495680_0032755 3300047322 Bacteria 4215
134 Ga0495684_0003859 3300047471 Bacteria 11679
135 Ga0496100_0000981 3300048903 Bacteria 13718
136 Ga0496101_0000424 3300048904 Bacteria 27117
137 Ga0496101_0024052 3300048904 Bacteria 4214
138 Ga0496105_0000597 3300048908 Bacteria 24061
139 Ga0496106_0006345 3300048909 Bacteria 8759
140 Ga0496108_0002557 3300048911 Bacteria 14569
141 Ga0496109_0001453 3300048912 Bacteria 19631
142 Ga0496110_0011223 3300048913 Bacteria 7324
143 Ga0496111_0006946 3300048914 Bacteria 7388
144 Ga0496114_0000392 3300048917 Bacteria 32304
145 Ga0496115_0012192 3300048918 Bacteria 6465
146 Ga0496115_0016878 3300048918 Bacteria 5568
147 Ga0501070_0000256 3300049586 Bacteria 50155
148 Ga0501074_0030301 3300049590 Bacteria 3921
149 Ga0501080_0044075 3300049742 Bacteria 4153
150 Ga0501044_0047360 3300049823 Bacteria 4447
151 nmdc:mga05p37_20731_c1 3300050507 Bacteria 7954
152 nmdc:mga0n895_469_c1 3300050512 Bacteria 27118
153 Ga0495601_0022976 3300053077 Bacteria 3832
154 Ga0495601_0023013 3300053077 Bacteria 3829
155 Ga0495619_0016669 3300053085 Bacteria 4649
156 Ga0495619_0021545 3300053085 Bacteria 4115
157 Ga0495619_0033531 3300053085 Bacteria 3335
158 Ga0501082_0028697 3300060353 Bacteria 4793
159 Ga0466962_0006148 3300061719 Bacteria 5770
160 Ga0466962_0013682 3300061719 Bacteria 3905
161 Ga0307416_100030351
162 Ga0070658_10058639
163 Ga0070683_100020579
164 Ga0070670_100001416
165 Ga0070680_100005196
166 Ga0070680_100016987
167 Ga0070682_100009960
168 Ga0070660_100002486
169 Ga0070661_100015581
170 Ga0070661_100029395
171 Ga0070714_100027646
172 Ga0070713_100035497
173 Ga0070681_10006125
174 Ga0070681_10059556
175 Ga0070707_100001488
176 Ga0070679_100008687
177 Ga0070679_100028314
178 Ga0070679_100033041
179 Ga0070665_100062480
180 Ga0068855_100009354
181 Ga0068857_100038476
182 Ga0068857_100061752
183 Ga0068854_100046060
184 Ga0068856_100067086
185 Ga0068852_100017633
186 Ga0081455_10007369
187 Ga0081538_10000254
188 Ga0105240_10085038
189 Ga0157370_10002516
190 Ga0157370_10014394
191 Ga0157370_10066287
192 Ga0157369_10002737
193 Ga0157369_10005843
194 Ga0157369_10028873
195 Ga0157369_10032284
196 Ga0157372_10070771
197 Ga0157372_10110069
198 Ga0206353_10423363
199 Ga0224712_10011884
200 Ga0207707_10036454
201 Ga0207657_10000388
202 Ga0207657_10001654
203 Ga0207657_10006020
204 Ga0207657_10007247
205 Ga0207657_10052233
206 Ga0207657_10054043
207 Ga0207652_10015416
208 Ga0207652_10074512
209 Ga0207646_10008898
210 Ga0207650_10001970
211 Ga0207664_10005221
212 Ga0207674_10019068
213 Ga0207674_10047661
214 Ga0265338_10009164
215 Ga0265338_10032951
216 Ga0265325_10018834
217 Ga0307408_100026401
218 Ga0265314_10005023
219 Ga0307406_10039440
220 Ga0373944_0001142
221 Ga0373943_0001097
222 Ga0373935_0001485
223 Ga0373935_0009041
224 Ga0373947_0000716
225 Ga0373925_0004218
226 Ga0373925_0025285
227 Ga0395899_0002355
228 Ga0395899_0003130
229 Ga0395899_0003713
230 Ga0395900_0005758
231 Ga0395900_0014115
232 Ga0395898_0000824
233 Ga0395905_0056986
234 Ga0395901_0000244
235 Ga0395901_0001584
236 Ga0395901_0002069
237 Ga0395901_0007695
238 Ga0466961_0041216
239 Ga0466963_0004157
240 Ga0466963_0005784
241 Ga0466963_0030443
242 Ga0466964_0001186
243 Ga0466957_0002461
244 Ga0466959_0001752
245 Ga0466959_0008601
246 Ga0466958_0004393
247 Ga0466958_0007682
248 Ga0466958_0030080
249 Ga0466958_0047285
250 Ga0466967_0000861
251 Ga0466967_0001304
252 Ga0466967_0002966
253 Ga0466967_0009669
254 Ga0466967_0020710
255 Ga0466967_0067682
256 Ga0466967_0068513
257 Ga0495629_0012731
258 Ga0495629_0067462
259 Ga0495641_0003459
260 Ga0495641_0024543
261 Ga0495651_0025345
262 Ga0495651_0058106
263 Ga0495653_0012441
264 Ga0495653_0034131
265 Ga0495582_0000276
266 Ga0495639_0000416
267 Ga0495662_0011608
268 Ga0495607_0008864
269 Ga0495608_0028372
270 Ga0495630_0001315
271 Ga0495630_0010880
272 Ga0495644_0019606
273 Ga0495640_0004359
274 Ga0495667_0045245
275 Ga0495656_0001091
276 Ga0495634_0020646
277 Ga0495634_0044783
278 Ga0495635_0025855
279 Ga0495635_0058062
280 Ga0495647_0001278
281 Ga0495658_0002918
282 Ga0495613_0012891
283 Ga0495613_0027962
284 Ga0495624_0004610
285 Ga0495600_0007224
286 Ga0495581_0007163
287 Ga0495604_0040219
288 Ga0495674_0028499
289 Ga0495674_0038616
290 Ga0495676_0025170
291 Ga0495680_0006991
292 Ga0495680_0008719
293 Ga0495680_0032755
294 Ga0495684_0003859
295 Ga0496100_0000981
296 Ga0496101_0000424
297 Ga0496101_0024052
298 Ga0496105_0000597
299 Ga0496106_0006345
300 Ga0496108_0002557
301 Ga0496109_0001453
302 Ga0496110_0011223
303 Ga0496111_0006946
304 Ga0496114_0000392
305 Ga0496115_0012192
306 Ga0496115_0016878
307 Ga0501070_0000256
308 Ga0501074_0030301
309 Ga0501080_0044075
310 Ga0501044_0047360
311 nmdc:mga05p37_20731_c1
312 nmdc:mga0n895_469_c1
313 Ga0495601_0022976
314 Ga0495601_0023013
315 Ga0495619_0016669
316 Ga0495619_0021545
317 Ga0495619_0033531
318 Ga0501082_0028697
319 Ga0466962_0006148
320 Ga0466962_0013682

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13298

LigD_N

DNA polymerase Ligase (LigD)

39

140

0.97

PF21686

LigD_Prim-Pol

LigD, primase-polymerase domain

513

771

0.96

PF04679

DNA_ligase_A_C

ATP dependent DNA ligase C terminal region

365

462

0.92

PF01896

DNA_primase_S

DNA primase small subunit

623

743

0.88

PF01068

DNA_ligase_A_M

ATP dependent DNA ligase domain

170

346

0.86

Map