F234063

General Info

Members Datasets Scaffolds Average Seq Length
160 104 320 285

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100128327|Ga0070698_1001283272
Length 303
Sequence MVEDPLQIGIAGIGRMGAAIAARLLDRGHTVMIWNRTAEKTKSLAAAGATVAATPQELSTAVDCIITMLTDAAAIDATYQGQNGLLAGKARGKLFIDMSTVRPEVEIALAAKVREQGAALIECPVGGTVGPAKEGKLFGFVGGDAGDVARAKPVLDELCRRVEHVGAVGAGASMKLAINLPLLVYYQALGEALSLCRSLVIDPTRLIDIFADTSGGPNMLKVRGPAIAATLQGRETTPVTFDVDLIRKDLRTMLEEAAALGVSLPLTARALECYDAAARDGLGASDATMLPAHWLREGGREVP

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
23 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
24 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
44 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
46 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
47 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
48 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
49 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300034819 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1 Metagenome Rhizosphere
52 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
53 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
54 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
55 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
56 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
57 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
58 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
59 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
60 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
62 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
63 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
66 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
67 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
68 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
69 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
70 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
71 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
72 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
73 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
74 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
75 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
76 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
77 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
78 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
79 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
80 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
81 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
82 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
83 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
84 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
85 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
86 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
87 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
88 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
89 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
92 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
93 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
94 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
95 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
96 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
97 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
98 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
99 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
100 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
101 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
102 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
103 2854681122 Luteovulum sphaeroides SCJ Isolate Unclassified
104 2996336353 Mesorhizobium sp. YM1C-6-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.75
Metatranscriptomes 0
Isolates 1.25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.62
Nodule 0
Rhizoplane 0
Rhizosphere 97.5
Stem 0
Stem Tuber 0
Unclassified 12.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100128327 3300005471 Unclassified 2492
2 Ga0070683_100034264 3300005329 Bacteria 4637
3 Ga0068868_100221230 3300005338 Bacteria 1585
4 Ga0070661_100274630 3300005344 Unclassified 1306
5 Ga0070713_100027274 3300005436 Bacteria 4495
6 Ga0070713_100662885 3300005436 Unclassified 994
7 Ga0070701_10035503 3300005438 Bacteria 2505
8 Ga0070705_100015072 3300005440 Bacteria 3989
9 Ga0070708_100069880 3300005445 Bacteria 3158
10 Ga0070708_100216443 3300005445 Bacteria 1796
11 Ga0070681_10046136 3300005458 Bacteria 4357
12 Ga0070706_100015611 3300005467 Bacteria 7016
13 Ga0070707_100042981 3300005468 Bacteria 4326
14 Ga0070698_100215111 3300005471 Bacteria 1856
15 Ga0070698_100379525 3300005471 Bacteria 1346
16 Ga0070698_100722154 3300005471 Bacteria 939
17 Ga0070679_100066025 3300005530 Bacteria 3606
18 Ga0070684_100020141 3300005535 Bacteria 5535
19 Ga0070697_100021938 3300005536 Bacteria 5065
20 Ga0070697_100220355 3300005536 Bacteria 1617
21 Ga0070697_100358152 3300005536 Unclassified 1261
22 Ga0070686_100008383 3300005544 Bacteria 5787
23 Ga0070695_100104391 3300005545 Bacteria 1913
24 Ga0070696_100386026 3300005546 Bacteria 1092
25 Ga0070704_100556718 3300005549 Unclassified 1003
26 Ga0068855_100204964 3300005563 Bacteria 2219
27 Ga0068855_100931584 3300005563 Bacteria 916
28 Ga0068852_100001255 3300005616 Bacteria 16897
29 Ga0068861_100155469 3300005719 Bacteria 1881
30 Ga0068851_10004404 3300005834 Bacteria 6347
31 Ga0068860_100054826 3300005843 Bacteria 3789
32 Ga0097621_100089810 3300006237 Bacteria 2569
33 Ga0068871_100146123 3300006358 Bacteria 2013
34 Ga0075428_100055853 3300006844 Bacteria 4325
35 Ga0075431_100002878 3300006847 Bacteria 16654
36 Ga0075433_10201560 3300006852 Unclassified 1769
37 Ga0075433_10215016 3300006852 Unclassified 1708
38 Ga0075434_100000007 3300006871 Bacteria 95975
39 Ga0075434_100050569 3300006871 Unclassified 4129
40 Ga0075434_100079594 3300006871 Unclassified 3273
41 Ga0075434_100232365 3300006871 Unclassified 1864
42 Ga0075434_100317631 3300006871 Unclassified 1578
43 Ga0075429_100043441 3300006880 Bacteria 3911
44 Ga0075429_100075036 3300006880 Bacteria 2946
45 Ga0075429_100188427 3300006880 Bacteria 1808
46 Ga0075436_100004046 3300006914 Bacteria 10053
47 Ga0075436_100056823 3300006914 Bacteria 2702
48 Ga0075436_100060096 3300006914 Bacteria 2625
49 Ga0075436_100175499 3300006914 Bacteria 1513
50 Ga0075436_100244340 3300006914 Unclassified 1277
51 Ga0075436_100412764 3300006914 Bacteria 979
52 Ga0075435_100008202 3300007076 Bacteria 7482
53 Ga0075435_100027716 3300007076 Bacteria 4434
54 Ga0075435_100045107 3300007076 Bacteria 3532
55 Ga0075435_100071272 3300007076 Unclassified 2838
56 Ga0075435_100189742 3300007076 Bacteria 1739
57 Ga0114129_10041776 3300009147 Bacteria 6457
58 Ga0207695_10192386 3300025913 Bacteria 1957
59 Ga0207660_10097497 3300025917 Bacteria 2191
60 Ga0207662_10107643 3300025918 Bacteria 1735
61 Ga0207664_10008856 3300025929 Bacteria 7041
62 Ga0207665_10009041 3300025939 Bacteria 6541
63 Ga0207665_10138297 3300025939 Bacteria 1734
64 Ga0207665_10196711 3300025939 Unclassified 1467
65 Ga0207661_10026880 3300025944 Bacteria 4391
66 Ga0207667_10188961 3300025949 Bacteria 2114
67 Ga0207676_10397809 3300026095 Bacteria 1287
68 Ga0207675_100203102 3300026118 Bacteria 1904
69 Ga0209968_1004115 3300027526 Bacteria 2183
70 Ga0209999_1000764 3300027543 Bacteria 5262
71 Ga0209974_10048084 3300027876 Bacteria 1429
72 Ga0307408_100271188 3300031548 Bacteria 1409
73 Ga0316579_10013494 3300031691 Bacteria 3515
74 Ga0265342_10077997 3300031712 Bacteria 1917
75 Ga0307413_10102727 3300031824 Bacteria 1893
76 Ga0307416_100062476 3300032002 Bacteria 3046
77 Ga0373958_0022020 3300034819 Bacteria 1187
78 Ga0373923_0062577 3300035111 Unclassified 1584
79 Ga0373954_0000299 3300035118 Bacteria 17961
80 Ga0373954_0015789 3300035118 Bacteria 3377
81 Ga0373954_0119232 3300035118 Unclassified 1280
82 Ga0373957_0022002 3300035120 Bacteria 2269
83 Ga0373955_0109599 3300035172 Bacteria 1595
84 Ga0373924_0100977 3300035410 Bacteria 1241
85 Ga0373935_0320877 3300035692 Bacteria 1099
86 Ga0373927_0063961 3300035695 Bacteria 2380
87 Ga0373933_0004257 3300035724 Bacteria 7876
88 Ga0373933_0245401 3300035724 Bacteria 1152
89 Ga0373937_0001152 3300036401 Bacteria 22140
90 Ga0373937_0095306 3300036401 Bacteria 2759
91 Ga0373925_0138980 3300037068 Bacteria 1900
92 Ga0373925_0234491 3300037068 Bacteria 1468
93 Ga0373925_0273666 3300037068 Bacteria 1359
94 Ga0436363_0621669 3300039450 Bacteria 1109
95 Ga0453684_0252695 3300044712 Bacteria 2024
96 Ga0451576_0217750 3300045051 Bacteria 1994
97 Ga0466967_0039063 3300045976 Bacteria 4077
98 Ga0495592_0003506 3300046454 Bacteria 11254
99 Ga0495592_0028578 3300046454 Bacteria 4223
100 Ga0495580_0021565 3300046472 Bacteria 4750
101 Ga0495582_0189302 3300046473 Bacteria 1174
102 Ga0495662_0005211 3300046476 Bacteria 6516
103 Ga0495608_0000311 3300046511 Bacteria 34069
104 Ga0495618_0108841 3300046514 Bacteria 1774
105 Ga0495628_0001250 3300046516 Bacteria 23254
106 Ga0495628_0007701 3300046516 Bacteria 9307
107 Ga0495666_0016164 3300046526 Bacteria 3716
108 Ga0495640_0013452 3300046533 Bacteria 6217
109 Ga0495640_0219296 3300046533 Bacteria 1200
110 Ga0495586_0000847 3300046535 Bacteria 17553
111 Ga0495587_0026168 3300046536 Bacteria 3559
112 Ga0495645_0030048 3300046543 Bacteria 3958
113 Ga0495667_0062242 3300046559 Bacteria 2446
114 Ga0495634_0002505 3300046642 Bacteria 15232
115 Ga0495635_0280991 3300046663 Unclassified 1118
116 Ga0495657_0257395 3300046675 Unclassified 1049
117 Ga0495599_0040541 3300046678 Bacteria 2924
118 Ga0495658_0029238 3300046683 Bacteria 2981
119 Ga0495613_0000664 3300046689 Bacteria 27277
120 Ga0495624_0025344 3300046690 Bacteria 3895
121 Ga0495604_0001754 3300047317 Bacteria 17739
122 Ga0495680_0001446 3300047322 Bacteria 25591
123 Ga0495675_0049584 3300047444 Bacteria 2669
124 Ga0495684_0312216 3300047471 Bacteria 1126
125 Ga0501034_0043887 3300049571 Bacteria 4522
126 Ga0501071_0513033 3300049587 Bacteria 920
127 Ga0501044_0590311 3300049823 Bacteria 1005
128 Ga0501044_0690069 3300049823 Bacteria 907
129 nmdc:mga05p37_105851_c1 3300050507 Bacteria 3460
130 nmdc:mga0qj67_55762_c1 3300050509 Bacteria 3131
131 nmdc:mga06r32_136877_c1 3300050510 Bacteria 2424
132 nmdc:mga06r32_6979_c1 3300050510 Bacteria 10163
133 nmdc:mga0n895_109327_c1 3300050512 Bacteria 2780
134 nmdc:mga0n895_1129000_c1 3300050512 Bacteria 760
135 nmdc:mga0n895_142750_c1 3300050512 Bacteria 2423
136 nmdc:mga0n895_145_c1 3300050512 Bacteria 43408
137 nmdc:mga0n895_270896_c1 3300050512 Bacteria 1722
138 nmdc:mga0n895_37739_c1 3300050512 Bacteria 4676
139 nmdc:mga0rr50_1101_c1 3300050513 Bacteria 14669
140 nmdc:mga0rr50_175628_c1 3300050513 Bacteria 1748
141 nmdc:mga0rr50_199641_c1 3300050513 Bacteria 1643
142 nmdc:mga0rr50_215507_c1 3300050513 Bacteria 1583
143 nmdc:mga0rr50_303491_c1 3300050513 Bacteria 1336
144 nmdc:mga0rr50_32027_c1 3300050513 Bacteria 3741
145 nmdc:mga0rr50_48898_c1 3300050513 Bacteria 3128
146 nmdc:mga0rr50_74579_c1 3300050513 Unclassified 2597
147 nmdc:mga0rr50_93743_c1 3300050513 Bacteria 2343
148 nmdc:mga08x19_27696_c1 3300050514 Bacteria 3545
149 nmdc:mga08x19_437860_c1 3300050514 Bacteria 919
150 nmdc:mga08x19_62206_c1 3300050514 Bacteria 2420
151 nmdc:mga08x19_6880_c1 3300050514 Bacteria 6751
152 nmdc:mga08x19_74303_c1 3300050514 Bacteria 2221
153 nmdc:mga0a205_190048_c1 3300050515 Unclassified 1946
154 nmdc:mga0a205_35268_c1 3300050515 Bacteria 4803
155 nmdc:mga0a205_53674_c1 3300050515 Bacteria 3890
156 Ga0495601_0005675 3300053077 Bacteria 7276
157 Ga0495619_0195552 3300053085 Bacteria 1400
158 Ga0500641_0005731 3300053096 Bacteria 4402
159 2854684986 2854681122 Bacteria 4548679
160 2996338646 2996336353 Bacteria 5511628
161 Ga0070698_100128327
162 Ga0070683_100034264
163 Ga0068868_100221230
164 Ga0070661_100274630
165 Ga0070713_100027274
166 Ga0070713_100662885
167 Ga0070701_10035503
168 Ga0070705_100015072
169 Ga0070708_100069880
170 Ga0070708_100216443
171 Ga0070681_10046136
172 Ga0070706_100015611
173 Ga0070707_100042981
174 Ga0070698_100215111
175 Ga0070698_100379525
176 Ga0070698_100722154
177 Ga0070679_100066025
178 Ga0070684_100020141
179 Ga0070697_100021938
180 Ga0070697_100220355
181 Ga0070697_100358152
182 Ga0070686_100008383
183 Ga0070695_100104391
184 Ga0070696_100386026
185 Ga0070704_100556718
186 Ga0068855_100204964
187 Ga0068855_100931584
188 Ga0068852_100001255
189 Ga0068861_100155469
190 Ga0068851_10004404
191 Ga0068860_100054826
192 Ga0097621_100089810
193 Ga0068871_100146123
194 Ga0075428_100055853
195 Ga0075431_100002878
196 Ga0075433_10201560
197 Ga0075433_10215016
198 Ga0075434_100000007
199 Ga0075434_100050569
200 Ga0075434_100079594
201 Ga0075434_100232365
202 Ga0075434_100317631
203 Ga0075429_100043441
204 Ga0075429_100075036
205 Ga0075429_100188427
206 Ga0075436_100004046
207 Ga0075436_100056823
208 Ga0075436_100060096
209 Ga0075436_100175499
210 Ga0075436_100244340
211 Ga0075436_100412764
212 Ga0075435_100008202
213 Ga0075435_100027716
214 Ga0075435_100045107
215 Ga0075435_100071272
216 Ga0075435_100189742
217 Ga0114129_10041776
218 Ga0207695_10192386
219 Ga0207660_10097497
220 Ga0207662_10107643
221 Ga0207664_10008856
222 Ga0207665_10009041
223 Ga0207665_10138297
224 Ga0207665_10196711
225 Ga0207661_10026880
226 Ga0207667_10188961
227 Ga0207676_10397809
228 Ga0207675_100203102
229 Ga0209968_1004115
230 Ga0209999_1000764
231 Ga0209974_10048084
232 Ga0307408_100271188
233 Ga0316579_10013494
234 Ga0265342_10077997
235 Ga0307413_10102727
236 Ga0307416_100062476
237 Ga0373958_0022020
238 Ga0373923_0062577
239 Ga0373954_0000299
240 Ga0373954_0015789
241 Ga0373954_0119232
242 Ga0373957_0022002
243 Ga0373955_0109599
244 Ga0373924_0100977
245 Ga0373935_0320877
246 Ga0373927_0063961
247 Ga0373933_0004257
248 Ga0373933_0245401
249 Ga0373937_0001152
250 Ga0373937_0095306
251 Ga0373925_0138980
252 Ga0373925_0234491
253 Ga0373925_0273666
254 Ga0436363_0621669
255 Ga0453684_0252695
256 Ga0451576_0217750
257 Ga0466967_0039063
258 Ga0495592_0003506
259 Ga0495592_0028578
260 Ga0495580_0021565
261 Ga0495582_0189302
262 Ga0495662_0005211
263 Ga0495608_0000311
264 Ga0495618_0108841
265 Ga0495628_0001250
266 Ga0495628_0007701
267 Ga0495666_0016164
268 Ga0495640_0013452
269 Ga0495640_0219296
270 Ga0495586_0000847
271 Ga0495587_0026168
272 Ga0495645_0030048
273 Ga0495667_0062242
274 Ga0495634_0002505
275 Ga0495635_0280991
276 Ga0495657_0257395
277 Ga0495599_0040541
278 Ga0495658_0029238
279 Ga0495613_0000664
280 Ga0495624_0025344
281 Ga0495604_0001754
282 Ga0495680_0001446
283 Ga0495675_0049584
284 Ga0495684_0312216
285 Ga0501034_0043887
286 Ga0501071_0513033
287 Ga0501044_0590311
288 Ga0501044_0690069
289 nmdc:mga05p37_105851_c1
290 nmdc:mga0qj67_55762_c1
291 nmdc:mga06r32_136877_c1
292 nmdc:mga06r32_6979_c1
293 nmdc:mga0n895_109327_c1
294 nmdc:mga0n895_1129000_c1
295 nmdc:mga0n895_142750_c1
296 nmdc:mga0n895_145_c1
297 nmdc:mga0n895_270896_c1
298 nmdc:mga0n895_37739_c1
299 nmdc:mga0rr50_1101_c1
300 nmdc:mga0rr50_175628_c1
301 nmdc:mga0rr50_199641_c1
302 nmdc:mga0rr50_215507_c1
303 nmdc:mga0rr50_303491_c1
304 nmdc:mga0rr50_32027_c1
305 nmdc:mga0rr50_48898_c1
306 nmdc:mga0rr50_74579_c1
307 nmdc:mga0rr50_93743_c1
308 nmdc:mga08x19_27696_c1
309 nmdc:mga08x19_437860_c1
310 nmdc:mga08x19_62206_c1
311 nmdc:mga08x19_6880_c1
312 nmdc:mga08x19_74303_c1
313 nmdc:mga0a205_190048_c1
314 nmdc:mga0a205_35268_c1
315 nmdc:mga0a205_53674_c1
316 Ga0495601_0005675
317 Ga0495619_0195552
318 Ga0500641_0005731
319 2854684986
320 2996338646

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

7

166

0.99

PF14833

NAD_binding_11

NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase

169

293

0.94

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

4

99

0.91

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

7

100

0.81

PF01488

Shikimate_DH

Shikimate / quinate 5-dehydrogenase

4

114

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
6j39-assembly1.cif.gz_A crystal structure of cmis2 with inhibitor 0.9812 1 29
6j38-assembly1.cif.gz_B-2 crystal structure of cmis2 0.9811 1 29
4j36-assembly1.cif.gz_A cocrystal structure of kynurenine 3-monooxygenase in complex with upf 648 inhibitor(kmo-394upf) 0.9672 1 30
1c0i-assembly1.cif.gz_A crystal structure of d-amino acid oxidase in complex with two anthranylate molecules 0.9648 2 32
5x6r-assembly2.cif.gz_B crystal structure of saccharomyces cerevisiae kmo in complex with ro 61-8048 0.9619 1 29
ID Description Score Start End Superfamily
af_Q5VQP1_29_415_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9711 3 29 3.50.50.60
af_F1QE62_28_195_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9569 2 156 3.40.50.720
4j36B00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9532 2 29 3.50.50.60
6j0zC01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.948 3 31 3.50.50.60
af_P75728_4_256_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9473 2 28 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A537B7W7-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9935 1 97 GO:0050661
AF-A0A536Z4Y8-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9785 1 76 GO:0050661
AF-A0A537B7W7-F1-model_v4 NAD(P)-dependent oxidoreductase 0.9735 1 97 GO:0050661
AF-A0A2V5W536-F1-model_v4 2-hydroxy-3-oxopropionate reductase 0.9697 1 164 GO:0016616
GO:0050661
AF-A0A1W1ZGW6-F1-model_v4 3-hydroxyisobutyrate dehydrogenase 0.9688 1 287 GO:0016054
GO:0016491
GO:0050661
GO:0051287

Map