F232806

General Info

Members Datasets Scaffolds Average Seq Length
159 134 318 633

Family's Representative Sequence

Representative Sequence 3300044683|Ga0466965_0012381|Ga0466965_0012381_2113_3999
Length 623
Sequence MLTLAQQAVAARSHVEARLAAAGVPVDAALAERLDAHFPRLLGHFTELYGDRDDCLEQLVALLRVVATAAAERPAELRALDAAREADPGWFLRSDMLGGVCYVDRYARDLEGVRARIPYFKELGLTYLHLMPLFAAPEGDSDGGYAVSSYREVSPALGDIDRLRALAADLRAAGISLVLDFVFNHTSDEHEWAVKAVAGEPGYEDFYLVYPDRTMPDRFERTTREIFPDDHRGSFVQLPDGRWIWSTFHRFQWDLNYANPAVFTAMAGEMLFLANLGVEILRMDAVAFIWKRLGTTCENLPEAHVLLRAFNAVCRLAAPSVLFKSEAIVHPDQVVEYCRLSYNPLQMALTWEALATRDVRLLSQALERRHALPDGCAWVNYVRSHDDIGWTFADEDAAELGIDGTDHRRFLNAFYVGRFPGSFARGVPFQENPRTGDARVSGTTASLAGVEAGDPLGVRRVLLAHAIALSTGGIPLLYLGDEVGQLNDPDALAEPGHAGDSRWVHRPAYPAERYAQRTDATTDAGAISLGLHRLVQVRRDTPALAGNTLVGFGTHDPHVLGYQRPGADGTVLVLANCSEAVRTVPAEVFAALPGTAHDLVTDVDVELWADVVLEPLQFLWLEL

Samples

Sample ID Description Type Environment
1 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
6 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
7 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
11 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
12 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
13 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
14 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
15 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
16 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
17 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
18 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
19 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
20 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
21 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
22 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
23 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
24 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
26 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
31 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
32 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
33 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
34 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
35 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
36 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
37 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
38 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
39 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
40 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
41 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
42 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
43 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
44 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
45 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
46 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
47 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
48 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
49 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
50 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
51 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
52 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
53 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
54 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
55 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
56 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
57 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
58 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
59 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
60 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
61 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
62 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
63 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
64 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
65 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
66 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
67 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
68 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
69 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
70 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
71 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
72 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
73 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
74 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
75 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
76 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
77 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
78 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
79 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
80 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
81 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
82 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
86 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
87 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
88 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
89 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
90 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
91 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
92 2773857759 Microbacterium sp. 1294 Isolate Unclassified
93 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
94 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
95 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
96 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
97 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
98 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
99 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
100 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
101 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
102 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
103 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
104 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
105 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
106 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
107 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
108 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
109 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
110 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
111 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
112 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
113 2919069694 Microbacterium sp. 1154 Isolate Unclassified
114 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
115 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
116 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
117 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
118 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
119 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
120 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
121 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
122 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
123 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
124 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
125 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
126 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
127 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
128 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
129 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
130 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
131 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
132 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
133 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
134 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 69.81
Metatranscriptomes 1.26
Isolates 28.93

Biome Distribution

Category Percentage (%)
Aerial Root 1.26
Bulb 0
Endosphere 9.43
Nodule 0
Rhizoplane 6.29
Rhizosphere 59.75
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466965_0012381 3300044683 Bacteria 4011
2 LJQas_1000640 3300000549 Bacteria 5637
3 JGI25152J39213_1001118 3300002773 Bacteria 12523
4 Ga0006562J51391_1096029 3300003578 Bacteria 10820
5 Ga0006562J51391_1096032 3300003578 Bacteria 5700
6 Ga0055527_1000003 3300003760 Bacteria 705001
7 Ga0055542_1000005 3300003762 Bacteria 550280
8 Ga0055529_1000046 3300003763 Bacteria 209430
9 Ga0070669_100038049 3300005353 Bacteria 3492
10 Ga0070675_100045605 3300005354 Bacteria 3587
11 Ga0070672_100005305 3300005543 Bacteria 8534
12 Ga0075365_10009612 3300006038 Bacteria 5575
13 Ga0075363_100020140 3300006048 Bacteria 3344
14 Ga0075367_10023629 3300006178 Bacteria 3461
15 Ga0075366_10056373 3300006195 Bacteria 2334
16 Ga0105244_10012362 3300009036 Bacteria 5045
17 Ga0105244_10012923 3300009036 Bacteria 4912
18 Ga0105244_10013080 3300009036 Bacteria 4867
19 Ga0105243_10009432 3300009148 Bacteria 7437
20 Ga0105243_10011067 3300009148 Bacteria 6824
21 Ga0105237_10016425 3300009545 Eukaryota 7690
22 Ga0105239_10000076 3300010375 Eukaryota 140423
23 Ga0163162_10030598 3300013306 Bacteria 5333
24 Ga0157379_10009507 3300014968 Bacteria 8466
25 Ga0209672_100003 3300025228 Bacteria 1560476
26 Ga0209148_1000004 3300025254 Bacteria 1844481
27 Ga0209129_1000109 3300025258 Bacteria 153068
28 Ga0209455_1000080 3300025272 Bacteria 266151
29 Ga0209025_1002251 3300025294 Bacteria 21185
30 Ga0207655_1003064 3300025728 Bacteria 12740
31 Ga0207709_10005150 3300025935 Bacteria 7456
32 Ga0207709_10012522 3300025935 Bacteria 4671
33 Ga0207691_10000484 3300025940 Bacteria 39400
34 Ga0207683_10002130 3300026121 Bacteria 17397
35 Ga0307509_10042216 3300031507 Bacteria 4945
36 Ga0307408_100039405 3300031548 Bacteria 3340
37 Ga0307514_10009523 3300031649 Bacteria 8162
38 Ga0307405_10011822 3300031731 Bacteria 4594
39 Ga0307413_10015096 3300031824 Bacteria 3949
40 Ga0307410_10090889 3300031852 Bacteria 2166
41 Ga0307406_10001248 3300031901 Bacteria 14252
42 Ga0307406_10018369 3300031901 Bacteria 4085
43 Ga0307412_10003396 3300031911 Bacteria 8846
44 Ga0307409_100003753 3300031995 Bacteria 8350
45 Ga0307416_100008713 3300032002 Bacteria 6571
46 Ga0307416_100015029 3300032002 Bacteria 5329
47 Ga0307416_100024790 3300032002 Bacteria 4385
48 Ga0395899_0012006 3300037312 Bacteria 6637
49 Ga0395899_0017576 3300037312 Bacteria 5448
50 Ga0395900_0005478 3300037418 Bacteria 13290
51 Ga0395900_0022034 3300037418 Bacteria 6516
52 Ga0395900_0105027 3300037418 Bacteria 2902
53 Ga0395898_0005718 3300037466 Bacteria 13398
54 Ga0395898_0020202 3300037466 Bacteria 6765
55 Ga0395898_0081961 3300037466 Bacteria 3110
56 Ga0395901_0017074 3300038443 Bacteria 7399
57 Ga0395901_0022220 3300038443 Bacteria 6500
58 Ga0395901_0037469 3300038443 Bacteria 5015
59 Ga0395901_0115375 3300038443 Bacteria 2821
60 Ga0439436_0018742 3300041404 Bacteria 2069
61 Ga0439442_000059 3300042002 Bacteria 25930
62 Ga0439442_001644 3300042002 Bacteria 4385
63 Ga0439449_0000462 3300042007 Bacteria 15170
64 Ga0439449_0000794 3300042007 Bacteria 12181
65 Ga0450920_000045 3300042122 Bacteria 15447
66 Ga0450907_001346 3300042146 Bacteria 5421
67 Ga0439434_0001958 3300042435 Bacteria 5958
68 Ga0450918_000827 3300042531 Bacteria 6518
69 Ga0466960_0024622 3300044901 Bacteria 2717
70 Ga0495653_0023002 3300046463 Bacteria 5040
71 Ga0495650_0001535 3300046471 Bacteria 21891
72 Ga0495639_0002961 3300046475 Bacteria 7390
73 Ga0495631_0010255 3300046518 Bacteria 4642
74 Ga0495643_0031858 3300046522 Bacteria 2931
75 Ga0495665_0000460 3300046531 Bacteria 20467
76 Ga0495586_0001125 3300046535 Bacteria 15048
77 Ga0495586_0001218 3300046535 Bacteria 14449
78 Ga0495587_0001013 3300046536 Bacteria 18464
79 Ga0495645_0000775 3300046543 Bacteria 21886
80 Ga0495667_0001717 3300046559 Bacteria 14540
81 Ga0495656_0000169 3300046615 Bacteria 23292
82 Ga0495656_0013114 3300046615 Bacteria 3075
83 Ga0495659_0000885 3300046664 Bacteria 10648
84 Ga0495588_0039339 3300046674 Bacteria 2408
85 Ga0495670_0000803 3300046691 Bacteria 15104
86 Ga0495636_0002128 3300047318 Bacteria 7612
87 Ga0496100_0000911 3300048903 Bacteria 14095
88 Ga0496101_0004365 3300048904 Bacteria 8883
89 Ga0496102_0042831 3300048905 Bacteria 4103
90 Ga0496104_0104107 3300048907 Bacteria 2719
91 Ga0496106_0002013 3300048909 Bacteria 15288
92 Ga0496106_0028283 3300048909 Bacteria 4175
93 Ga0496107_0000205 3300048910 Bacteria 31113
94 Ga0496111_0035660 3300048914 Bacteria 3556
95 Ga0496114_0037844 3300048917 Bacteria 3991
96 Ga0496114_0063156 3300048917 Bacteria 3100
97 Ga0496117_0000063 3300048920 Bacteria 254446
98 Ga0496119_0005084 3300048922 Bacteria 12771
99 Ga0496120_0001031 3300048923 Bacteria 37261
100 Ga0496120_0008759 3300048923 Bacteria 7275
101 Ga0496122_0009348 3300048925 Bacteria 10350
102 Ga0496123_0008676 3300048926 Bacteria 9288
103 Ga0496124_0017780 3300048927 Bacteria 6686
104 Ga0496125_0005357 3300048928 Bacteria 14313
105 Ga0496125_0010566 3300048928 Bacteria 9330
106 Ga0501032_0009178 3300049569 Bacteria 7171
107 Ga0501037_0005756 3300049573 Bacteria 9050
108 Ga0501039_0010818 3300049575 Bacteria 6952
109 Ga0501039_0039446 3300049575 Bacteria 3647
110 Ga0501070_0006726 3300049586 Bacteria 9788
111 Ga0501044_0041948 3300049823 Bacteria 4763
112 nmdc:mga00v17_21630_c1 3300050491 Bacteria 3699
113 nmdc:mga0k408_8864_c1 3300050493 Bacteria 5410
114 2691515672 2690315906 Bacteria 4517044
115 2758226751 2757320536 Bacteria 3629334
116 2774380794 2773857758 Bacteria 3592392
117 2774382526 2773857759 Bacteria 2963774
118 2775657416 2775506735 Bacteria 4556596
119 2808828835 2808606357 Bacteria 4466944
120 2808850064 2808606360 Bacteria 4404006
121 2808877378 2808606366 Bacteria 4415912
122 2808883761 2808606368 Bacteria 3174172
123 2808893071 2808606370 Bacteria 4942454
124 2808898854 2808606371 Bacteria 4251511
125 2809227413 2808606447 Bacteria 3572005
126 2810364371 2808606700 Bacteria 3482157
127 2812319460 2811994871 Bacteria 4497550
128 2812324481 2811994872 Bacteria 4121241
129 2821271198 2821268502 Bacteria 3750023
130 2833712182 2833709550 Bacteria 4008291
131 2844851760 2844849076 Bacteria 4091819
132 2852633207 2852632344 Bacteria 3463163
133 2862996794 2862993130 Bacteria 3860849
134 2870631475 2870628048 Bacteria 3696012
135 2904511320 2904509784 Bacteria 3520416
136 2905927914 2905926851 Bacteria 4423176
137 2908679959 2908678064 Bacteria 3482747
138 2919072078 2919069694 Bacteria 3622919
139 2919395591 2919391150 Bacteria 4884741
140 2928091856 2928090899 Bacteria 3158267
141 2939602270 2939598168 Bacteria 4687164
142 2945917210 2945916053 Bacteria 4555517
143 2945922527 2945920336 Bacteria 4501603
144 2945959021 2945956166 Bacteria 5110334
145 2946005517 2946003308 Bacteria 3857229
146 2946037183 2946037020 Bacteria 4900426
147 2946061015 2946059875 Bacteria 4386623
148 2966924049 2966921586 Bacteria 3092803
149 2974296705 2974294766 Bacteria 3767688
150 2974305163 2974302888 Bacteria 4369871
151 2974327060 2974324384 Bacteria 3750535
152 2977228738 2977228692 Bacteria 3450105
153 2977237445 2977236895 Bacteria 3569373
154 2977252712 2977251589 Bacteria 2952848
155 2977267409 2977264416 Bacteria 3750737
156 2984544767 2984542743 Bacteria 3569378
157 2984581382 2984580707 Bacteria 3351387
158 8016256922 8016254467 Bacteria 3797036
159 8054111466 8054107350 Bacteria 5022511
160 Ga0466965_0012381
161 LJQas_1000640
162 JGI25152J39213_1001118
163 Ga0006562J51391_1096029
164 Ga0006562J51391_1096032
165 Ga0055527_1000003
166 Ga0055542_1000005
167 Ga0055529_1000046
168 Ga0070669_100038049
169 Ga0070675_100045605
170 Ga0070672_100005305
171 Ga0075365_10009612
172 Ga0075363_100020140
173 Ga0075367_10023629
174 Ga0075366_10056373
175 Ga0105244_10012362
176 Ga0105244_10012923
177 Ga0105244_10013080
178 Ga0105243_10009432
179 Ga0105243_10011067
180 Ga0105237_10016425
181 Ga0105239_10000076
182 Ga0163162_10030598
183 Ga0157379_10009507
184 Ga0209672_100003
185 Ga0209148_1000004
186 Ga0209129_1000109
187 Ga0209455_1000080
188 Ga0209025_1002251
189 Ga0207655_1003064
190 Ga0207709_10005150
191 Ga0207709_10012522
192 Ga0207691_10000484
193 Ga0207683_10002130
194 Ga0307509_10042216
195 Ga0307408_100039405
196 Ga0307514_10009523
197 Ga0307405_10011822
198 Ga0307413_10015096
199 Ga0307410_10090889
200 Ga0307406_10001248
201 Ga0307406_10018369
202 Ga0307412_10003396
203 Ga0307409_100003753
204 Ga0307416_100008713
205 Ga0307416_100015029
206 Ga0307416_100024790
207 Ga0395899_0012006
208 Ga0395899_0017576
209 Ga0395900_0005478
210 Ga0395900_0022034
211 Ga0395900_0105027
212 Ga0395898_0005718
213 Ga0395898_0020202
214 Ga0395898_0081961
215 Ga0395901_0017074
216 Ga0395901_0022220
217 Ga0395901_0037469
218 Ga0395901_0115375
219 Ga0439436_0018742
220 Ga0439442_000059
221 Ga0439442_001644
222 Ga0439449_0000462
223 Ga0439449_0000794
224 Ga0450920_000045
225 Ga0450907_001346
226 Ga0439434_0001958
227 Ga0450918_000827
228 Ga0466960_0024622
229 Ga0495653_0023002
230 Ga0495650_0001535
231 Ga0495639_0002961
232 Ga0495631_0010255
233 Ga0495643_0031858
234 Ga0495665_0000460
235 Ga0495586_0001125
236 Ga0495586_0001218
237 Ga0495587_0001013
238 Ga0495645_0000775
239 Ga0495667_0001717
240 Ga0495656_0000169
241 Ga0495656_0013114
242 Ga0495659_0000885
243 Ga0495588_0039339
244 Ga0495670_0000803
245 Ga0495636_0002128
246 Ga0496100_0000911
247 Ga0496101_0004365
248 Ga0496102_0042831
249 Ga0496104_0104107
250 Ga0496106_0002013
251 Ga0496106_0028283
252 Ga0496107_0000205
253 Ga0496111_0035660
254 Ga0496114_0037844
255 Ga0496114_0063156
256 Ga0496117_0000063
257 Ga0496119_0005084
258 Ga0496120_0001031
259 Ga0496120_0008759
260 Ga0496122_0009348
261 Ga0496123_0008676
262 Ga0496124_0017780
263 Ga0496125_0005357
264 Ga0496125_0010566
265 Ga0501032_0009178
266 Ga0501037_0005756
267 Ga0501039_0010818
268 Ga0501039_0039446
269 Ga0501070_0006726
270 Ga0501044_0041948
271 nmdc:mga00v17_21630_c1
272 nmdc:mga0k408_8864_c1
273 2691515672
274 2758226751
275 2774380794
276 2774382526
277 2775657416
278 2808828835
279 2808850064
280 2808877378
281 2808883761
282 2808893071
283 2808898854
284 2809227413
285 2810364371
286 2812319460
287 2812324481
288 2821271198
289 2833712182
290 2844851760
291 2852633207
292 2862996794
293 2870631475
294 2904511320
295 2905927914
296 2908679959
297 2919072078
298 2919395591
299 2928091856
300 2939602270
301 2945917210
302 2945922527
303 2945959021
304 2946005517
305 2946037183
306 2946061015
307 2966924049
308 2974296705
309 2974305163
310 2974327060
311 2977228738
312 2977237445
313 2977252712
314 2977267409
315 2984544767
316 2984581382
317 8016256922
318 8054111466

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00128

Alpha-amylase

Alpha amylase, catalytic domain

108

386

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
4flq-assembly1.cif.gz_A crystal structure of amylosucrase double mutant a289p-f290i from neisseria polysaccharea. 0.9565 8 635
1jgi-assembly1.cif.gz_A crystal structure of the active site mutant glu328gln of amylosucrase from neisseria polysaccharea in complex with the natural substrate sucrose 0.9564 8 635
4flo-assembly1.cif.gz_A crystal structure of amylosucrase double mutant a289p-f290c from neisseria polysaccharea 0.9564 8 635
1zs2-assembly1.cif.gz_A amylosucrase mutant e328q in a ternary complex with sucrose and maltoheptaose 0.9563 8 635
1jg9-assembly1.cif.gz_A crystal structure of amylosucrase from neisseria polysaccharea in complex with d-glucose 0.9563 8 635
ID Description Score Start End Superfamily
1mw2A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9698 101 555 3.20.20.80
1mw2A02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9649 101 555 3.20.20.80
1g5aA03 Alpha Beta;Alpha-Beta Complex;Oligo-1,6-glucosidase; domain 2;Oligo-1,6-glucosidase; Domain 2 0.9142 189 260 3.90.400.10
1g5aA04 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.912 557 635 2.60.40.1180
4aysA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.9039 101 557 3.20.20.80
ID Description Score Start End GO Terms
AF-A0A6M0F359-F1-model_v4 Amylosucrase 0.9825 35 304 GO:0005975
AF-A0A4Y3UP78-F1-model_v4 Amylosucrase 0.9776 8 635 GO:0005975
GO:0016798
GO:0047669
AF-A0A495RZV2-F1-model_v4 Amylosucrase 0.9761 8 635 GO:0005975
GO:0047669
AF-E8N8Q8-F1-model_v4 Glycosidase 0.9752 11 635 GO:0005975
GO:0016798
GO:0047669
AF-R7Z5F5-F1-model_v4 Glycosyl hydrolase family 13 catalytic domain-containing protein 0.9749 4 631 GO:0000023
GO:0016052
GO:0047669

Map