F232550

General Info

Members Datasets Scaffolds Average Seq Length
159 110 318 769

Family's Representative Sequence

Representative Sequence 3300031995|Ga0307409_100001713|Ga0307409_10000171310
Length 873
Sequence MVNPVCRPGVTLTVHPIADPLLGLDQDLLQPAVQGIDGGLVQWDGPLRPPLSMLPWEAQMVRWRKRLAAAAVLLSVLALTGTLLASQSASAAGPRYLDPKAPVSARVKDLLRRMTLEEKVGQMDQIVLGKLRAPSPPANGDCNGGNNDPLQPVCLQKVLIDEHTGSILSGGTDNPTDNTGRGWAVQYNTIQRYAIEHSRLHIPIIYGVDAVHGFGHPFEATLFPQSIGMGATWDPALARAAGAATRRQLLATGGNWNFAPVQDLARDNRWGRYYETWAEAPVLAAAIGAANVRGLQGGGFDAPKVAATVKHFAGYSESINGHDRVEAQLSLRYLQDTFFPSYAGGIDAGAATVMVNSGSVNGVPATASRFLLTDELRGRLGFKGVVISDYGDVRSLQTAYHIAADYPEAVAKAVNAGVDVAMEPSDPAGWNAALLQDVRSGAVSRARVNEAVTRILTLKFKLGLFDHPYVDPAKANAAVTANRGLARKAAGKSITLLRNQNATLPLKADLGKVVVTGPSAGCEAANPSADPACQAAIANQLGGWSVSWQGAYQKLPPDDHRNCCIGPPDQIPTATTVLDGIKAAAPSSKVVWAPDRQTAVQEAGSADAVVAVVGEQPYAEGLGDNPQPRLPDDQQALIAALEATGKPVIVVVVAGRPLGLGPAADADGLLMAYLPGTEGGSAVADVLFGKVNPSGHLSVSWPSEATRNPPLSQFNPGAPSLLGDQPKFLDQLPGTNSGQGSGYNPRYPFGFGLSYTTFATSGLSATATVPRNGAVTVTFTIANTGKRAGTQVVPVYVHQPVSRGVIVVPPKRLVGFARVQLAAGQSKVVRVDFPVSALAVTAGDIDAAGRRVVQPGAYQVQVEDLTADFSVTG

Samples

Sample ID Description Type Environment
1 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
31 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
34 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
35 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
49 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
50 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
51 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
52 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
53 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
54 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
55 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
56 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
57 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
58 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
59 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
60 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
61 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
62 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
65 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
66 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
67 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
68 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
69 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
70 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
71 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
72 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
73 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
74 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
75 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
76 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
77 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
78 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
79 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
80 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
81 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
82 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
83 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
84 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
85 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
86 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
87 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
88 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
89 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
90 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
91 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
92 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
103 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
104 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
105 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
106 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
107 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
108 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
109 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
110 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.23
Metatranscriptomes 2.52
Isolates 1.26

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.63
Nodule 0
Rhizoplane 5.66
Rhizosphere 89.94
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307409_100001713 3300031995 Bacteria 11058
2 JGI25406J46586_10001317 3300003203 Bacteria 11674
3 JGI25407J50210_10005704 3300003373 Bacteria 3071
4 Ga0058863_10006015 3300004799 Bacteria 2632
5 Ga0070658_10001570 3300005327 Bacteria 19358
6 Ga0070683_100004448 3300005329 Bacteria 11556
7 Ga0070714_100007448 3300005435 Bacteria 8519
8 Ga0070663_100000551 3300005455 Bacteria 19934
9 Ga0070681_10043853 3300005458 Bacteria 4477
10 Ga0070706_100001241 3300005467 Bacteria 27287
11 Ga0070698_100006114 3300005471 Bacteria 13108
12 Ga0070698_100018554 3300005471 Bacteria 7323
13 Ga0070699_100040268 3300005518 Bacteria 4046
14 Ga0068856_100008617 3300005614 Bacteria 9918
15 Ga0068861_100047426 3300005719 Bacteria 3242
16 Ga0081455_10002929 3300005937 Bacteria 20014
17 Ga0081455_10006765 3300005937 Bacteria 12232
18 Ga0081455_10007776 3300005937 Bacteria 11238
19 Ga0081455_10012168 3300005937 Bacteria 8596
20 Ga0081455_10017842 3300005937 Bacteria 6785
21 Ga0081455_10026872 3300005937 Bacteria 5285
22 Ga0081538_10000085 3300005981 Bacteria 89830
23 Ga0081540_1000730 3300005983 Bacteria 30273
24 Ga0081539_10000919 3300005985 Bacteria 55491
25 Ga0081539_10027488 3300005985 Bacteria 3602
26 Ga0070717_10005334 3300006028 Bacteria 9370
27 Ga0075432_10005385 3300006058 Bacteria 4362
28 Ga0075428_100000251 3300006844 Bacteria 52691
29 Ga0075430_100010566 3300006846 Bacteria 7816
30 Ga0075431_100002566 3300006847 Bacteria 17536
31 Ga0075433_10001182 3300006852 Bacteria 18987
32 Ga0075434_100000502 3300006871 Bacteria 29641
33 Ga0075434_100022353 3300006871 Bacteria 6159
34 Ga0075429_100011043 3300006880 Bacteria 7816
35 Ga0075429_100047987 3300006880 Bacteria 3714
36 Ga0075436_100012234 3300006914 Bacteria 5880
37 Ga0075435_100054436 3300007076 Bacteria 3229
38 Ga0114129_10000024 3300009147 Bacteria 116794
39 Ga0114129_10158339 3300009147 Bacteria 3096
40 Ga0157369_10012161 3300013105 Bacteria 9771
41 Ga0197907_10928080 3300020069 Bacteria 2796
42 Ga0206353_10423878 3300020082 Bacteria 5360
43 Ga0213876_10009284 3300021384 Bacteria 5298
44 Ga0213875_10007734 3300021388 Bacteria 5529
45 Ga0224712_10012540 3300022467 Bacteria 2672
46 Ga0207705_10004620 3300025909 Bacteria 10389
47 Ga0207684_10001330 3300025910 Bacteria 27116
48 Ga0207693_10013505 3300025915 Bacteria 6582
49 Ga0207664_10005661 3300025929 Bacteria 8540
50 Ga0207706_10023171 3300025933 Bacteria 5577
51 Ga0207661_10000898 3300025944 Bacteria 19495
52 Ga0207661_10004680 3300025944 Bacteria 9582
53 Ga0207667_10108562 3300025949 Bacteria 2863
54 Ga0207668_10007629 3300025972 Bacteria 6442
55 Ga0207668_10024099 3300025972 Bacteria 3923
56 Ga0207678_10000940 3300026067 Bacteria 26556
57 Ga0207702_10006004 3300026078 Bacteria 10544
58 Ga0207674_10026580 3300026116 Bacteria 6141
59 Ga0207675_100020727 3300026118 Bacteria 6129
60 Ga0207675_100040584 3300026118 Bacteria 4347
61 Ga0207428_10017895 3300027907 Bacteria 6074
62 Ga0307517_10022581 3300028786 Bacteria 7877
63 Ga0307405_10007487 3300031731 Bacteria 5464
64 Ga0307410_10015247 3300031852 Bacteria 4552
65 Ga0307406_10017938 3300031901 Bacteria 4128
66 Ga0307407_10008903 3300031903 Bacteria 4639
67 Ga0307407_10018949 3300031903 Bacteria 3494
68 Ga0307409_100008834 3300031995 Bacteria 6146
69 Ga0307409_100033487 3300031995 Bacteria 3740
70 Ga0307416_100001578 3300032002 Bacteria 12494
71 Ga0307416_100019671 3300032002 Bacteria 4794
72 Ga0307415_100006850 3300032126 Bacteria 6183
73 Ga0307415_100012969 3300032126 Bacteria 4845
74 Ga0307415_100013027 3300032126 Bacteria 4837
75 Ga0307415_100041728 3300032126 Bacteria 3049
76 Ga0373942_0000842 3300035207 Bacteria 8418
77 Ga0373931_0001706 3300035691 Bacteria 9521
78 Ga0373937_0041871 3300036401 Bacteria 4180
79 Ga0395899_0005438 3300037312 Bacteria 9880
80 Ga0395899_0009158 3300037312 Bacteria 7605
81 Ga0395899_0035509 3300037312 Bacteria 3742
82 Ga0395900_0011972 3300037418 Bacteria 8870
83 Ga0395900_0016401 3300037418 Bacteria 7552
84 Ga0395900_0020029 3300037418 Bacteria 6821
85 Ga0395900_0032487 3300037418 Bacteria 5367
86 Ga0395900_0034399 3300037418 Bacteria 5217
87 Ga0395900_0071990 3300037418 Bacteria 3554
88 Ga0395898_0010193 3300037466 Bacteria 9838
89 Ga0395898_0020074 3300037466 Bacteria 6790
90 Ga0395898_0021012 3300037466 Bacteria 6622
91 Ga0395898_0107056 3300037466 Bacteria 2681
92 Ga0395905_0002012 3300037471 Bacteria 23225
93 Ga0395905_0009004 3300037471 Bacteria 9796
94 Ga0395905_0009484 3300037471 Bacteria 9511
95 Ga0395905_0031290 3300037471 Bacteria 5010
96 Ga0395905_0039692 3300037471 Bacteria 4416
97 Ga0395905_0061315 3300037471 Bacteria 3518
98 Ga0395905_0074907 3300037471 Bacteria 3172
99 Ga0395901_0006696 3300038443 Bacteria 11643
100 Ga0395901_0018710 3300038443 Bacteria 7075
101 Ga0395901_0023918 3300038443 Bacteria 6266
102 Ga0395901_0025111 3300038443 Bacteria 6117
103 Ga0395901_0026191 3300038443 Bacteria 5986
104 Ga0395901_0052782 3300038443 Bacteria 4225
105 Ga0436365_0421950 3300039437 Bacteria 13838
106 Ga0439448_0002258 3300042005 Bacteria 5211
107 Ga0439455_0001903 3300042012 Bacteria 3662
108 Ga0439440_0006439 3300042993 Bacteria 2362
109 Ga0466966_0020598 3300044684 Bacteria 4334
110 Ga0466966_0043207 3300044684 Bacteria 2890
111 Ga0466961_0007742 3300044693 Bacteria 6839
112 Ga0466963_0002056 3300044694 Bacteria 11097
113 Ga0466959_0013655 3300045049 Bacteria 5892
114 Ga0466958_0022328 3300045836 Bacteria 3705
115 Ga0466967_0042929 3300045976 Bacteria 3912
116 Ga0466967_0084914 3300045976 Bacteria 2865
117 Ga0495629_0072064 3300046459 Bacteria 2411
118 Ga0495585_0034654 3300046492 Bacteria 2854
119 Ga0495628_0039342 3300046516 Bacteria 3783
120 Ga0495628_0055459 3300046516 Bacteria 3122
121 Ga0495663_0009594 3300046525 Bacteria 2685
122 Ga0495640_0004399 3300046533 Bacteria 11240
123 Ga0495634_0003073 3300046642 Bacteria 13584
124 Ga0495657_0006679 3300046675 Bacteria 9007
125 Ga0495613_0039454 3300046689 Bacteria 3501
126 Ga0495624_0030988 3300046690 Bacteria 3481
127 Ga0495600_0027712 3300046809 Bacteria 3662
128 Ga0495676_0045770 3300047321 Bacteria 3558
129 Ga0495687_009469 3300047443 Bacteria 5440
130 Ga0495685_000343 3300047447 Bacteria 14944
131 Ga0495681_0001269 3300047470 Bacteria 19144
132 Ga0496102_0007653 3300048905 Bacteria 9229
133 Ga0496104_0004514 3300048907 Bacteria 12134
134 Ga0496105_0011934 3300048908 Bacteria 6880
135 Ga0496108_0011666 3300048911 Bacteria 7150
136 Ga0496109_0005331 3300048912 Bacteria 10751
137 Ga0496110_0005547 3300048913 Bacteria 9904
138 Ga0496110_0046012 3300048913 Bacteria 3816
139 Ga0496112_0070908 3300048915 Bacteria 3444
140 Ga0496114_0025723 3300048917 Bacteria 4813
141 Ga0501032_0028382 3300049569 Bacteria 3845
142 Ga0501034_0054865 3300049571 Bacteria 4011
143 Ga0501034_0062869 3300049571 Bacteria 3727
144 Ga0501036_0027813 3300049572 Bacteria 4780
145 Ga0501047_0000191 3300049581 Bacteria 74396
146 Ga0501047_0023713 3300049581 Bacteria 5891
147 Ga0501044_0115909 3300049823 Bacteria 2685
148 nmdc:mga05p37_189_c1 3300050507 Bacteria 61137
149 nmdc:mga05p37_3236_c1 3300050507 Bacteria 18966
150 nmdc:mga09592_2_c1 3300050508 Bacteria 168133
151 nmdc:mga0qj67_10_c2 3300050509 Bacteria 57980
152 nmdc:mga06r32_39_c2 3300050510 Bacteria 25335
153 nmdc:mga0rr50_21579_c1 3300050513 Bacteria 4399
154 nmdc:mga08x19_30468_c1 3300050514 Bacteria 3389
155 nmdc:mga0a205_11097_c1 3300050515 Bacteria 8290
156 nmdc:mga0a205_19731_c1 3300050515 Bacteria 6361
157 Ga0500633_0001043 3300053160 Bacteria 4939
158 2995470058 2995463766 Bacteria 8577691
159 3006327541 3006321560 Bacteria 8247479
160 Ga0307409_100001713
161 JGI25406J46586_10001317
162 JGI25407J50210_10005704
163 Ga0058863_10006015
164 Ga0070658_10001570
165 Ga0070683_100004448
166 Ga0070714_100007448
167 Ga0070663_100000551
168 Ga0070681_10043853
169 Ga0070706_100001241
170 Ga0070698_100006114
171 Ga0070698_100018554
172 Ga0070699_100040268
173 Ga0068856_100008617
174 Ga0068861_100047426
175 Ga0081455_10002929
176 Ga0081455_10006765
177 Ga0081455_10007776
178 Ga0081455_10012168
179 Ga0081455_10017842
180 Ga0081455_10026872
181 Ga0081538_10000085
182 Ga0081540_1000730
183 Ga0081539_10000919
184 Ga0081539_10027488
185 Ga0070717_10005334
186 Ga0075432_10005385
187 Ga0075428_100000251
188 Ga0075430_100010566
189 Ga0075431_100002566
190 Ga0075433_10001182
191 Ga0075434_100000502
192 Ga0075434_100022353
193 Ga0075429_100011043
194 Ga0075429_100047987
195 Ga0075436_100012234
196 Ga0075435_100054436
197 Ga0114129_10000024
198 Ga0114129_10158339
199 Ga0157369_10012161
200 Ga0197907_10928080
201 Ga0206353_10423878
202 Ga0213876_10009284
203 Ga0213875_10007734
204 Ga0224712_10012540
205 Ga0207705_10004620
206 Ga0207684_10001330
207 Ga0207693_10013505
208 Ga0207664_10005661
209 Ga0207706_10023171
210 Ga0207661_10000898
211 Ga0207661_10004680
212 Ga0207667_10108562
213 Ga0207668_10007629
214 Ga0207668_10024099
215 Ga0207678_10000940
216 Ga0207702_10006004
217 Ga0207674_10026580
218 Ga0207675_100020727
219 Ga0207675_100040584
220 Ga0207428_10017895
221 Ga0307517_10022581
222 Ga0307405_10007487
223 Ga0307410_10015247
224 Ga0307406_10017938
225 Ga0307407_10008903
226 Ga0307407_10018949
227 Ga0307409_100008834
228 Ga0307409_100033487
229 Ga0307416_100001578
230 Ga0307416_100019671
231 Ga0307415_100006850
232 Ga0307415_100012969
233 Ga0307415_100013027
234 Ga0307415_100041728
235 Ga0373942_0000842
236 Ga0373931_0001706
237 Ga0373937_0041871
238 Ga0395899_0005438
239 Ga0395899_0009158
240 Ga0395899_0035509
241 Ga0395900_0011972
242 Ga0395900_0016401
243 Ga0395900_0020029
244 Ga0395900_0032487
245 Ga0395900_0034399
246 Ga0395900_0071990
247 Ga0395898_0010193
248 Ga0395898_0020074
249 Ga0395898_0021012
250 Ga0395898_0107056
251 Ga0395905_0002012
252 Ga0395905_0009004
253 Ga0395905_0009484
254 Ga0395905_0031290
255 Ga0395905_0039692
256 Ga0395905_0061315
257 Ga0395905_0074907
258 Ga0395901_0006696
259 Ga0395901_0018710
260 Ga0395901_0023918
261 Ga0395901_0025111
262 Ga0395901_0026191
263 Ga0395901_0052782
264 Ga0436365_0421950
265 Ga0439448_0002258
266 Ga0439455_0001903
267 Ga0439440_0006439
268 Ga0466966_0020598
269 Ga0466966_0043207
270 Ga0466961_0007742
271 Ga0466963_0002056
272 Ga0466959_0013655
273 Ga0466958_0022328
274 Ga0466967_0042929
275 Ga0466967_0084914
276 Ga0495629_0072064
277 Ga0495585_0034654
278 Ga0495628_0039342
279 Ga0495628_0055459
280 Ga0495663_0009594
281 Ga0495640_0004399
282 Ga0495634_0003073
283 Ga0495657_0006679
284 Ga0495613_0039454
285 Ga0495624_0030988
286 Ga0495600_0027712
287 Ga0495676_0045770
288 Ga0495687_009469
289 Ga0495685_000343
290 Ga0495681_0001269
291 Ga0496102_0007653
292 Ga0496104_0004514
293 Ga0496105_0011934
294 Ga0496108_0011666
295 Ga0496109_0005331
296 Ga0496110_0005547
297 Ga0496110_0046012
298 Ga0496112_0070908
299 Ga0496114_0025723
300 Ga0501032_0028382
301 Ga0501034_0054865
302 Ga0501034_0062869
303 Ga0501036_0027813
304 Ga0501047_0000191
305 Ga0501047_0023713
306 Ga0501044_0115909
307 nmdc:mga05p37_189_c1
308 nmdc:mga05p37_3236_c1
309 nmdc:mga09592_2_c1
310 nmdc:mga0qj67_10_c2
311 nmdc:mga06r32_39_c2
312 nmdc:mga0rr50_21579_c1
313 nmdc:mga08x19_30468_c1
314 nmdc:mga0a205_11097_c1
315 nmdc:mga0a205_19731_c1
316 Ga0500633_0001043
317 2995470058
318 3006327541

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00933

Glyco_hydro_3

Glycosyl hydrolase family 3 N terminal domain

115

458

0.94

PF14310

Fn3-like

Fibronectin type III-like domain

791

865

0.89

PF01915

Glyco_hydro_3_C

Glycosyl hydrolase family 3 C-terminal domain

494

755

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jgk-assembly1.cif.gz_A crystal structure of barley exohydrolasei w434f mutant in complex with 4i,4iii,4v-s-trithiocellohexaose 0.8465 51 593
6mi1-assembly1.cif.gz_A crystal structure analysis of the variant plant exohydrolase arg158ala-glu161ala in complex with methyl 6-thio-beta-gentiobioside 0.8452 51 593
6jg6-assembly1.cif.gz_A crystal structure of barley exohydrolasei w286a mutant in complex with methyl 6-thio-beta-gentiobioside 0.8441 51 593
6jg1-assembly1.cif.gz_A crystal structure of barley exohydrolasei wildtype in complex with 4i,4iii,4v-s-trithiocellohexaose 0.8432 51 593
6jgb-assembly1.cif.gz_A crystal structure of barley exohydrolasei w286f mutant in complex with methyl 6-thio-beta-gentiobioside 0.8431 51 592
ID Description Score Start End Superfamily
5jp0B03 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8794 653 729 2.60.40.10
af_Q7X7M4_664_770_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8672 653 730 2.60.40.10
5m6gA01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase, family 3, N-terminal domain 0.8542 55 422 3.20.20.300
af_Q23892_701_821_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8539 653 731 2.60.40.10
af_Q23892_71_450_3.20.20.300 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase, family 3, N-terminal domain 0.8483 57 419 3.20.20.300
ID Description Score Start End GO Terms
AF-T1BP50-F1-model_v4 Protein containing Glycoside hydrolase, family 3 (EC 3.2.1.-) 0.9381 293 397 GO:0009044
GO:0031222
GO:0045493
GO:0046556
AF-A0A1Q7BHH9-F1-model_v4 beta-glucosidase (EC 3.2.1.21) 0.9356 84 496 GO:0008422
GO:0009251
AF-A0A060BZK8-F1-model_v4 Glyco_hydro_3 0.9319 274 411 GO:0009044
GO:0031222
GO:0045493
GO:0046556
AF-A0A5M4APL4-F1-model_v4 beta-glucosidase (EC 3.2.1.21) 0.9243 250 368 GO:0008422
GO:0009251
AF-K1RWT0-F1-model_v4 Protein containing Glycoside hydrolase, family 3 (EC 3.2.1.-) 0.9174 290 431 GO:0008422
GO:0009251

Map