F232096

General Info

Members Datasets Scaffolds Average Seq Length
159 113 318 550

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10136579|Ga0105248_101365793
Length 602
Sequence VAPERAMTVDCEVAIVGSGFAGSLLARVLAAQGYHVILLERGTHPRFAIGESTTPLANLSLERIATRYGLRDCYRLAAHGRWLAHYPELRRGLKRGFTYYRHHPGEPFADRGLGSERLLVAASPEDAIADVHWMRSDVDEHFVREAIAAGVDYRDRVELTQAEFDDGGASLRGARLGEPIEIRAKFVVDASGPSGFLARQLSIPSGLERTRTRAGLVFSHFDGVRTMDELLPSLPRGPYPDDWAAVHHIVDEGWMYSLRFDDGVTSAGFLLTPRGVASLGDATSGGAERLWTTMLERYPTIGAAFADATPTMPIAWLPRIQHRLTRAAGARWALLPHAYAFVDPLFSTGIAWGLRAVERLGLMFEDARRGGAEGTARARGAAASRDRVPDVTSLDRYERALAAEADQIDTLVAGAYEAMAQFDLFAAQAMLYFASVSFAEVGQRIAPDESVAWRGFLGVGDRVLEPLFGESLRRLTEITRGYGDAGMGGCGTASVIPSEECRAFAEWMAGAIAPRNVAGLADPSRHNLYPVDLDLLVERHELLGMTRERLMESLPALRGMSPEPSFPRASRASGGSADPSTSLGMTLPVAPSERSEPRELHS

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
20 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
24 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
32 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
41 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
42 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
52 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
53 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
54 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
80 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
81 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
82 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
83 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
86 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
87 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
88 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
89 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
90 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
91 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
92 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
93 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
94 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
95 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
96 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
97 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
98 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
99 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
100 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
101 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
102 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
105 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
106 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
107 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
108 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
109 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
110 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
111 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
112 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
113 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.89
Rhizosphere 98.11
Stem 0
Stem Tuber 0
Unclassified 13.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10136579 3300009177 Bacteria 2766
2 Ga0070658_10006046 3300005327 Bacteria 9817
3 Ga0070676_10040495 3300005328 Unclassified 2698
4 Ga0070683_100003095 3300005329 Bacteria 13395
5 Ga0070683_100022588 3300005329 Bacteria 5624
6 Ga0070683_100067747 3300005329 Unclassified 3325
7 Ga0070680_100003963 3300005336 Bacteria 11075
8 Ga0070680_100026156 3300005336 Unclassified 4667
9 Ga0070682_100018604 3300005337 Unclassified 4065
10 Ga0068868_100077787 3300005338 Bacteria 2655
11 Ga0070689_100072517 3300005340 Unclassified 2691
12 Ga0070661_100006498 3300005344 Bacteria 8064
13 Ga0070661_100008193 3300005344 Bacteria 7209
14 Ga0070692_10035254 3300005345 Unclassified 2532
15 Ga0070668_100030517 3300005347 Bacteria 4098
16 Ga0070668_100081233 3300005347 Bacteria 2541
17 Ga0070669_100000002 3300005353 Bacteria 506497
18 Ga0070669_100010936 3300005353 Bacteria 6444
19 Ga0070675_100011305 3300005354 Bacteria 6986
20 Ga0070671_100011038 3300005355 Bacteria 7250
21 Ga0070673_100020900 3300005364 Bacteria 4731
22 Ga0070688_100085334 3300005365 Bacteria 2052
23 Ga0070659_100018425 3300005366 Bacteria 5268
24 Ga0070667_100049376 3300005367 Bacteria 3544
25 Ga0070709_10054269 3300005434 Bacteria 2526
26 Ga0070714_100072356 3300005435 Bacteria 2984
27 Ga0070708_100000009 3300005445 Bacteria 141840
28 Ga0070708_100000091 3300005445 Bacteria 59200
29 Ga0070681_10003040 3300005458 Bacteria 15553
30 Ga0070681_10008237 3300005458 Bacteria 10201
31 Ga0070681_10012191 3300005458 Bacteria 8524
32 Ga0070681_10016098 3300005458 Bacteria 7454
33 Ga0070681_10050320 3300005458 Bacteria 4157
34 Ga0070681_10085177 3300005458 Unclassified 3113
35 Ga0070706_100107375 3300005467 Bacteria 2597
36 Ga0070707_100000964 3300005468 Bacteria 28497
37 Ga0070698_100055194 3300005471 Bacteria 4030
38 Ga0070699_100095199 3300005518 Bacteria 2607
39 Ga0070679_100004249 3300005530 Bacteria 13218
40 Ga0070679_100005090 3300005530 Bacteria 12143
41 Ga0070679_100005160 3300005530 Bacteria 12085
42 Ga0070679_100039274 3300005530 Bacteria 4704
43 Ga0070684_100005997 3300005535 Bacteria 9363
44 Ga0070684_100006812 3300005535 Bacteria 8863
45 Ga0070684_100057310 3300005535 Bacteria 3401
46 Ga0068853_100068457 3300005539 Bacteria 3086
47 Ga0068853_100092977 3300005539 Bacteria 2654
48 Ga0070672_100046890 3300005543 Bacteria 3350
49 Ga0070696_100011433 3300005546 Bacteria 5946
50 Ga0070693_100044943 3300005547 Bacteria 2501
51 Ga0070665_100000134 3300005548 Bacteria 139586
52 Ga0068855_100011716 3300005563 Bacteria 10598
53 Ga0070664_100010744 3300005564 Bacteria 7423
54 Ga0070664_100050901 3300005564 Bacteria 3506
55 Ga0070664_100083799 3300005564 Bacteria 2751
56 Ga0070664_100178548 3300005564 Bacteria 1886
57 Ga0068857_100007508 3300005577 Bacteria 9380
58 Ga0068857_100011494 3300005577 Bacteria 7702
59 Ga0068851_10029460 3300005834 Bacteria 2718
60 Ga0081539_10000019 3300005985 Bacteria 369381
61 Ga0097621_100121028 3300006237 Bacteria 2220
62 Ga0075431_100003567 3300006847 Bacteria 15070
63 Ga0075431_100013913 3300006847 Bacteria 8125
64 Ga0075433_10076835 3300006852 Bacteria 2941
65 Ga0075433_10169518 3300006852 Unclassified 1943
66 Ga0075434_100012099 3300006871 Bacteria 8170
67 Ga0075429_100005540 3300006880 Bacteria 10878
68 Ga0075436_100012358 3300006914 Bacteria 5851
69 Ga0105240_10165848 3300009093 Bacteria 2620
70 Ga0111539_10043234 3300009094 Bacteria 5402
71 Ga0105245_10021798 3300009098 Bacteria 5623
72 Ga0114129_10054626 3300009147 Bacteria 5599
73 Ga0105242_10001277 3300009176 Bacteria 19893
74 Ga0105248_10008020 3300009177 Bacteria 11597
75 Ga0105248_10011689 3300009177 Bacteria 9675
76 Ga0105248_10193789 3300009177 Unclassified 2290
77 Ga0105248_10207906 3300009177 Unclassified 2205
78 Ga0157378_10050204 3300013297 Unclassified 3712
79 Ga0157372_10024827 3300013307 Bacteria 6514
80 Ga0157372_10046570 3300013307 Unclassified 4815
81 Ga0157372_10129937 3300013307 Bacteria 2897
82 Ga0157375_10036809 3300013308 Bacteria 4685
83 Ga0163161_10014571 3300017792 Bacteria 5472
84 Ga0207656_10014047 3300025321 Bacteria 3076
85 Ga0207699_10009565 3300025906 Bacteria 4833
86 Ga0207645_10056644 3300025907 Bacteria 2502
87 Ga0207645_10071592 3300025907 Bacteria 2219
88 Ga0207643_10006238 3300025908 Bacteria 6379
89 Ga0207707_10003375 3300025912 Bacteria 14171
90 Ga0207707_10087792 3300025912 Bacteria 2717
91 Ga0207660_10046405 3300025917 Unclassified 3066
92 Ga0207660_10104267 3300025917 Unclassified 2123
93 Ga0207649_10023913 3300025920 Unclassified 3545
94 Ga0207652_10005430 3300025921 Bacteria 10342
95 Ga0207652_10010587 3300025921 Bacteria 7423
96 Ga0207652_10018235 3300025921 Bacteria 5755
97 Ga0207652_10139450 3300025921 Unclassified 2167
98 Ga0207646_10001141 3300025922 Bacteria 33848
99 Ga0207646_10172255 3300025922 Unclassified 1955
100 Ga0207646_10204532 3300025922 Unclassified 1784
101 Ga0207681_10000009 3300025923 Bacteria 410736
102 Ga0207690_10007321 3300025932 Bacteria 6551
103 Ga0207706_10001152 3300025933 Bacteria 26910
104 Ga0207706_10083944 3300025933 Bacteria 2800
105 Ga0207665_10008304 3300025939 Bacteria 6856
106 Ga0207691_10070477 3300025940 Bacteria 3156
107 Ga0207691_10079475 3300025940 Bacteria 2952
108 Ga0207711_10013022 3300025941 Bacteria 6908
109 Ga0207661_10004668 3300025944 Bacteria 9599
110 Ga0207661_10130001 3300025944 Bacteria 2155
111 Ga0207679_10016996 3300025945 Unclassified 4840
112 Ga0207667_10231677 3300025949 Bacteria 1891
113 Ga0207651_10018914 3300025960 Bacteria 4114
114 Ga0207639_10068714 3300026041 Bacteria 2762
115 Ga0207708_10008256 3300026075 Bacteria 7712
116 Ga0207648_10042090 3300026089 Bacteria 4011
117 Ga0207648_10077582 3300026089 Bacteria 2896
118 Ga0207674_10000044 3300026116 Bacteria 123506
119 Ga0207674_10013179 3300026116 Bacteria 9197
120 Ga0209999_1002643 3300027543 Bacteria 3172
121 Ga0268266_10000637 3300028379 Bacteria 47708
122 Ga0307408_100002594 3300031548 Bacteria 12589
123 Ga0373947_0004536 3300035725 Bacteria 8145
124 Ga0373925_0001629 3300037068 Bacteria 18946
125 Ga0453683_0003746 3300044673 Bacteria 11091
126 Ga0466959_0053986 3300045049 Bacteria 2937
127 Ga0451576_0091899 3300045051 Bacteria 3157
128 Ga0495603_0000585 3300046455 Bacteria 20493
129 Ga0495638_0008833 3300046460 Bacteria 7116
130 Ga0495580_0006679 3300046472 Bacteria 9364
131 Ga0495582_0000359 3300046473 Bacteria 24917
132 Ga0495582_0004424 3300046473 Bacteria 7904
133 Ga0495639_0000318 3300046475 Bacteria 23428
134 Ga0495594_0004081 3300046499 Bacteria 7506
135 Ga0495630_0002133 3300046517 Bacteria 13757
136 Ga0495665_0000121 3300046531 Bacteria 37260
137 Ga0495588_0004411 3300046674 Bacteria 6216
138 Ga0495658_0001317 3300046683 Bacteria 13010
139 Ga0495613_0057138 3300046689 Bacteria 2865
140 Ga0495581_0011800 3300047315 Bacteria 5059
141 Ga0495581_0018182 3300047315 Bacteria 4083
142 Ga0495593_0000462 3300047673 Bacteria 22828
143 Ga0495614_0002058 3300048089 Bacteria 8853
144 Ga0496100_0049043 3300048903 Bacteria 2728
145 Ga0496107_0053015 3300048910 Bacteria 2926
146 Ga0496112_0162713 3300048915 Bacteria 2198
147 Ga0501033_0009390 3300049570 Bacteria 7532
148 Ga0501047_0062320 3300049581 Unclassified 3597
149 Ga0501067_0036700 3300049583 Bacteria 2721
150 Ga0501069_0088769 3300049585 Unclassified 1748
151 Ga0501083_0055376 3300049744 Bacteria 2659
152 Ga0501044_0071940 3300049823 Unclassified 3516
153 nmdc:mga05p37_342911_c1 3300050507 Bacteria 1761
154 nmdc:mga09592_74017_c1 3300050508 Bacteria 2895
155 nmdc:mga06r32_23355_c1 3300050510 Bacteria 5720
156 nmdc:mga08x19_13630_c1 3300050514 Bacteria 4918
157 nmdc:mga0a205_38310_c1 3300050515 Bacteria 4611
158 nmdc:mga0a205_49338_c1 3300050515 Bacteria 4063
159 Ga0495601_0054517 3300053077 Bacteria 2530
160 Ga0105248_10136579
161 Ga0070658_10006046
162 Ga0070676_10040495
163 Ga0070683_100003095
164 Ga0070683_100022588
165 Ga0070683_100067747
166 Ga0070680_100003963
167 Ga0070680_100026156
168 Ga0070682_100018604
169 Ga0068868_100077787
170 Ga0070689_100072517
171 Ga0070661_100006498
172 Ga0070661_100008193
173 Ga0070692_10035254
174 Ga0070668_100030517
175 Ga0070668_100081233
176 Ga0070669_100000002
177 Ga0070669_100010936
178 Ga0070675_100011305
179 Ga0070671_100011038
180 Ga0070673_100020900
181 Ga0070688_100085334
182 Ga0070659_100018425
183 Ga0070667_100049376
184 Ga0070709_10054269
185 Ga0070714_100072356
186 Ga0070708_100000009
187 Ga0070708_100000091
188 Ga0070681_10003040
189 Ga0070681_10008237
190 Ga0070681_10012191
191 Ga0070681_10016098
192 Ga0070681_10050320
193 Ga0070681_10085177
194 Ga0070706_100107375
195 Ga0070707_100000964
196 Ga0070698_100055194
197 Ga0070699_100095199
198 Ga0070679_100004249
199 Ga0070679_100005090
200 Ga0070679_100005160
201 Ga0070679_100039274
202 Ga0070684_100005997
203 Ga0070684_100006812
204 Ga0070684_100057310
205 Ga0068853_100068457
206 Ga0068853_100092977
207 Ga0070672_100046890
208 Ga0070696_100011433
209 Ga0070693_100044943
210 Ga0070665_100000134
211 Ga0068855_100011716
212 Ga0070664_100010744
213 Ga0070664_100050901
214 Ga0070664_100083799
215 Ga0070664_100178548
216 Ga0068857_100007508
217 Ga0068857_100011494
218 Ga0068851_10029460
219 Ga0081539_10000019
220 Ga0097621_100121028
221 Ga0075431_100003567
222 Ga0075431_100013913
223 Ga0075433_10076835
224 Ga0075433_10169518
225 Ga0075434_100012099
226 Ga0075429_100005540
227 Ga0075436_100012358
228 Ga0105240_10165848
229 Ga0111539_10043234
230 Ga0105245_10021798
231 Ga0114129_10054626
232 Ga0105242_10001277
233 Ga0105248_10008020
234 Ga0105248_10011689
235 Ga0105248_10193789
236 Ga0105248_10207906
237 Ga0157378_10050204
238 Ga0157372_10024827
239 Ga0157372_10046570
240 Ga0157372_10129937
241 Ga0157375_10036809
242 Ga0163161_10014571
243 Ga0207656_10014047
244 Ga0207699_10009565
245 Ga0207645_10056644
246 Ga0207645_10071592
247 Ga0207643_10006238
248 Ga0207707_10003375
249 Ga0207707_10087792
250 Ga0207660_10046405
251 Ga0207660_10104267
252 Ga0207649_10023913
253 Ga0207652_10005430
254 Ga0207652_10010587
255 Ga0207652_10018235
256 Ga0207652_10139450
257 Ga0207646_10001141
258 Ga0207646_10172255
259 Ga0207646_10204532
260 Ga0207681_10000009
261 Ga0207690_10007321
262 Ga0207706_10001152
263 Ga0207706_10083944
264 Ga0207665_10008304
265 Ga0207691_10070477
266 Ga0207691_10079475
267 Ga0207711_10013022
268 Ga0207661_10004668
269 Ga0207661_10130001
270 Ga0207679_10016996
271 Ga0207667_10231677
272 Ga0207651_10018914
273 Ga0207639_10068714
274 Ga0207708_10008256
275 Ga0207648_10042090
276 Ga0207648_10077582
277 Ga0207674_10000044
278 Ga0207674_10013179
279 Ga0209999_1002643
280 Ga0268266_10000637
281 Ga0307408_100002594
282 Ga0373947_0004536
283 Ga0373925_0001629
284 Ga0453683_0003746
285 Ga0466959_0053986
286 Ga0451576_0091899
287 Ga0495603_0000585
288 Ga0495638_0008833
289 Ga0495580_0006679
290 Ga0495582_0000359
291 Ga0495582_0004424
292 Ga0495639_0000318
293 Ga0495594_0004081
294 Ga0495630_0002133
295 Ga0495665_0000121
296 Ga0495588_0004411
297 Ga0495658_0001317
298 Ga0495613_0057138
299 Ga0495581_0011800
300 Ga0495581_0018182
301 Ga0495593_0000462
302 Ga0495614_0002058
303 Ga0496100_0049043
304 Ga0496107_0053015
305 Ga0496112_0162713
306 Ga0501033_0009390
307 Ga0501047_0062320
308 Ga0501067_0036700
309 Ga0501069_0088769
310 Ga0501083_0055376
311 Ga0501044_0071940
312 nmdc:mga05p37_342911_c1
313 nmdc:mga09592_74017_c1
314 nmdc:mga06r32_23355_c1
315 nmdc:mga08x19_13630_c1
316 nmdc:mga0a205_38310_c1
317 nmdc:mga0a205_49338_c1
318 Ga0495601_0054517

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

15

63

0.92

PF01494

FAD_binding_3

FAD binding domain

10

231

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ado-assembly1.cif.gz_A crystal structure of the rabbit l-gulonate 3-dehydrogenase 0.956 10 39
7cb2-assembly1.cif.gz_A the 6-phosphogluconate dehydrogenase (nadp-bound) from staphylococcus aureus 0.9486 8 39
6fqz-assembly1.cif.gz_B plasmodium falciparum 6-phosphogluconate dehydrogenase in its apo form, in complex with its cofactor nadp+ and in complex with its substrate 6-phosphogluconate 0.9479 9 39
2w8z-assembly1.cif.gz_A geobacillus stearothermophilus 6-phosphogluconate dehydrogenase with bound 6- phosphogluconate 0.9425 8 39
2zyg-assembly1.cif.gz_A apo-form of dimeric 6-phosphogluconate dehydrogenase 0.9368 9 40
ID Description Score Start End Superfamily
af_Q4DU92_1_145_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9717 10 39 3.40.50.720
af_Q4D0X5_1_185_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9622 10 39 3.40.50.720
3gg2D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9618 10 39 3.40.50.720
2w8zA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9425 8 39 3.40.50.720
6hrdB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9412 10 40 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2V7KR54-F1-model_v4 FAD-dependent oxidoreductase 0.9683 8 403 GO:0004497
AF-A0A2V7KR54-F1-model_v4 FAD-dependent oxidoreductase 0.9631 8 403 GO:0004497
AF-A0A2V7N209-F1-model_v4 FAD-binding domain-containing protein 0.9598 2 536 GO:0004497
AF-A0A0S8B1F9-F1-model_v4 FAD-binding domain-containing protein 0.9578 4 531 GO:0016491
GO:0071949
AF-A0A2V7R373-F1-model_v4 FAD dependent oxidoreductase domain-containing protein 0.9571 1 535 GO:0016491

Map