F232027

General Info

Members Datasets Scaffolds Average Seq Length
159 92 154 519

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10006213|Ga0111539_100062133
Length 555
Sequence MSRPVVLIIRDGWGANPHPEHDAFNAVKLARTPVADQLMREWPTTLVITCGEDVGLPAGTMGNSEVGHQNIGAGRIVDQELMRITRAIRDGSFFTRTAFLQAIAHARANNTNLHLLGLLSDGHVHSDIEHLYALLDVAQREKFPGDRVFIHAITDGRDVGPTTGIGYIKALEARIAASPAPASQRPRIVTVCGRYYAMDRDNRWERVARAYAVLTRQSVSHPLLAPGEERPQSARSAIDAVQRYYEHPSEPSRTGDEFVVPTQIVSPTTGRPLAAIADGDAVIFYNFRGDRPRELVKALMLSDAEWKKVPNGGFERGRKIENLFFATMSGYEQGLPVSAIAFDKPPKMPNILGEAVSAAGLTQFRCAETEKFPHVTFFFDDYREQSFPGTTRELIPSPKEVTTYDQKPEMSASGVCEAVLGRLQAADCQPLIVVNFANPDMVGHTGKLDAAIKAVETVDACVGRIVEATLGRAERPGSLIITADHGNAEQMWDPVHNCPHTSHTTYDVPLIVVGGEYRGMTLRPGGRLADIAPTVLAMMGLPKPDEMTGRSLFTA

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 2838074704 Sinorhizobium terangae SEMIA 6460 Isolate Unclassified
3 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
4 2920760137 Ensifer psoraleae CCBAU 65732 Isolate Unclassified
5 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
21 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
22 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
23 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
24 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
25 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
35 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
36 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
37 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
38 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
39 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
40 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
41 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
42 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
43 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
47 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
48 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
49 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
50 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
51 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
52 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
53 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
54 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
55 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
56 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
57 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
60 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
61 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
62 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
63 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
66 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
67 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
68 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
69 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
70 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
80 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
81 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
82 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
83 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
84 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
85 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
86 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
88 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
89 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
90 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
91 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
92 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.86
Metatranscriptomes 0
Isolates 3.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.63
Nodule 0
Rhizoplane 0
Rhizosphere 92.45
Stem 0
Stem Tuber 0
Unclassified 6.92

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10005815 3300003320 Bacteria 16762
2 rootH1_10045609 3300003323 Bacteria 5892
3 Ga0070683_100004314 3300005329 Bacteria 11686
4 Ga0070683_100026044 3300005329 Bacteria 5261
5 Ga0068869_100000086 3300005334 Bacteria 42241
6 Ga0070714_100002904 3300005435 Bacteria 12681
7 Ga0070713_100032438 3300005436 Bacteria 4172
8 Ga0068867_100027131 3300005459 Bacteria 4115
9 Ga0070707_100156448 3300005468 Bacteria 2220
10 Ga0070679_100006764 3300005530 Bacteria 10693
11 Ga0070684_100067489 3300005535 Bacteria 3142
12 Ga0068856_100008797 3300005614 Bacteria 9825
13 Ga0068866_10012107 3300005718 Bacteria 3754
14 Ga0068858_100015912 3300005842 Bacteria 7067
15 Ga0070717_10000125 3300006028 Bacteria 57538
16 Ga0068871_100009884 3300006358 Bacteria 6927
17 Ga0068865_100032234 3300006881 Bacteria 3499
18 Ga0111539_10006213 3300009094 Bacteria 15417
19 Ga0111539_10255498 3300009094 Bacteria 2041
20 Ga0105242_10124723 3300009176 Bacteria 2215
21 Ga0105248_10022321 3300009177 Bacteria 7019
22 Ga0207684_10094630 3300025910 Bacteria 2548
23 Ga0207660_10148514 3300025917 Bacteria 1799
24 Ga0207652_10085916 3300025921 Bacteria 2758
25 Ga0207646_10086094 3300025922 Bacteria 2811
26 Ga0207700_10005047 3300025928 Bacteria 7853
27 Ga0207689_10000023 3300025942 Bacteria 107806
28 Ga0207661_10021565 3300025944 Bacteria 4828
29 Ga0207661_10038201 3300025944 Bacteria 3761
30 Ga0207702_10014255 3300026078 Bacteria 6602
31 Ga0207702_10161986 3300026078 Bacteria 2043
32 Ga0207648_10001277 3300026089 Bacteria 28143
33 Ga0265337_1002293 3300028556 Bacteria 8890
34 Ga0265337_1006860 3300028556 Bacteria 4325
35 Ga0265337_1012691 3300028556 Bacteria 2853
36 Ga0265337_1013995 3300028556 Bacteria 2673
37 Ga0265319_1000032 3300028563 Bacteria 119321
38 Ga0265319_1000206 3300028563 Bacteria 44786
39 Ga0265319_1001484 3300028563 Bacteria 14010
40 Ga0265319_1002551 3300028563 Bacteria 9858
41 Ga0265319_1006806 3300028563 Bacteria 5230
42 Ga0265319_1009767 3300028563 Bacteria 4052
43 Ga0265319_1010402 3300028563 Bacteria 3885
44 Ga0265319_1013649 3300028563 Bacteria 3218
45 Ga0265334_10010008 3300028573 Bacteria 4008
46 Ga0265318_10000075 3300028577 Bacteria 94310
47 Ga0265318_10000528 3300028577 Bacteria 27421
48 Ga0265318_10001187 3300028577 Bacteria 15998
49 Ga0265318_10001519 3300028577 Bacteria 13518
50 Ga0265318_10002302 3300028577 Bacteria 10255
51 Ga0265318_10002852 3300028577 Bacteria 9023
52 Ga0265336_10002502 3300028666 Bacteria 7530
53 Ga0265336_10009859 3300028666 Bacteria 3288
54 Ga0265338_10001187 3300028800 Bacteria 42989
55 Ga0265338_10002456 3300028800 Bacteria 27727
56 Ga0265338_10009545 3300028800 Bacteria 11546
57 Ga0265338_10011083 3300028800 Bacteria 10457
58 Ga0265324_10002505 3300029957 Bacteria 9328
59 Ga0265324_10020180 3300029957 Bacteria 2396
60 Ga0265320_10000009 3300031240 Bacteria 255096
61 Ga0265320_10000301 3300031240 Bacteria 40337
62 Ga0265320_10000610 3300031240 Bacteria 27422
63 Ga0265320_10001363 3300031240 Bacteria 17819
64 Ga0265320_10002453 3300031240 Bacteria 12910
65 Ga0265320_10004685 3300031240 Bacteria 8926
66 Ga0265320_10006134 3300031240 Bacteria 7611
67 Ga0265320_10010196 3300031240 Bacteria 5612
68 Ga0265320_10019590 3300031240 Bacteria 3695
69 Ga0265320_10022131 3300031240 Bacteria 3406
70 Ga0265320_10025227 3300031240 Bacteria 3129
71 Ga0265320_10033369 3300031240 Bacteria 2628
72 Ga0265339_10021562 3300031249 Bacteria 3745
73 Ga0265331_10004724 3300031250 Bacteria 8429
74 Ga0265327_10000037 3300031251 Bacteria 293502
75 Ga0265327_10011175 3300031251 Bacteria 6220
76 Ga0265327_10016066 3300031251 Bacteria 4783
77 Ga0265327_10062784 3300031251 Bacteria 1889
78 Ga0265316_10002267 3300031344 Bacteria 20153
79 Ga0265316_10015511 3300031344 Bacteria 6658
80 Ga0265316_10021367 3300031344 Bacteria 5482
81 Ga0307408_100000033 3300031548 Bacteria 212574
82 Ga0265313_10001344 3300031595 Bacteria 23154
83 Ga0265313_10002083 3300031595 Bacteria 17876
84 Ga0265313_10002361 3300031595 Bacteria 16448
85 Ga0265313_10004080 3300031595 Bacteria 11376
86 Ga0307508_10001681 3300031616 Bacteria 24560
87 Ga0265314_10002491 3300031711 Bacteria 18812
88 Ga0265314_10002815 3300031711 Bacteria 17348
89 Ga0265314_10008945 3300031711 Bacteria 8529
90 Ga0265314_10017604 3300031711 Bacteria 5602
91 Ga0265314_10093123 3300031711 Bacteria 1957
92 Ga0316576_10013075 3300031727 Bacteria 5504
93 Ga0316576_10116275 3300031727 Bacteria 2007
94 Ga0307410_10000025 3300031852 Bacteria 58385
95 Ga0307412_10020294 3300031911 Bacteria 4042
96 Ga0307409_100000036 3300031995 Bacteria 47069
97 Ga0307409_100014289 3300031995 Bacteria 5156
98 Ga0307416_100000061 3300032002 Bacteria 99793
99 Ga0307416_100013418 3300032002 Bacteria 5568
100 Ga0307415_100001837 3300032126 Bacteria 10407
101 Ga0373942_0006542 3300035207 Bacteria 2694
102 Ga0395898_0177274 3300037466 Bacteria 2037
103 Ga0395905_0000015 3300037471 Bacteria 393880
104 Ga0395905_0017123 3300037471 Bacteria 6883
105 Ga0395905_0215482 3300037471 Bacteria 1798
106 Ga0436365_1028672 3300039437 Bacteria 4891
107 Ga0451577_0000150 3300042876 Bacteria 154181
108 Ga0451577_0002064 3300042876 Bacteria 24799
109 Ga0451577_0011518 3300042876 Bacteria 8358
110 Ga0453683_0000939 3300044673 Bacteria 27735
111 Ga0466963_0174672 3300044694 Bacteria 1498
112 Ga0453684_0028404 3300044712 Bacteria 7981
113 Ga0453684_0058965 3300044712 Bacteria 4954
114 Ga0453684_0079405 3300044712 Bacteria 4102
115 Ga0451576_0003519 3300045051 Bacteria 21390
116 Ga0451576_0003943 3300045051 Bacteria 19801
117 Ga0451576_0006199 3300045051 Bacteria 14723
118 Ga0451576_0006689 3300045051 Bacteria 14062
119 Ga0451576_0112122 3300045051 Bacteria 2838
120 Ga0495664_0051247 3300046477 Bacteria 2451
121 Ga0495628_0096057 3300046516 Bacteria 2290
122 Ga0495674_0047073 3300047319 Bacteria 3826
123 Ga0496116_0000089 3300048919 Bacteria 213129
124 Ga0496118_0003190 3300048921 Bacteria 20948
125 Ga0501032_0002151 3300049569 Bacteria 15516
126 Ga0501032_0004077 3300049569 Bacteria 11068
127 Ga0501033_0009875 3300049570 Bacteria 7324
128 Ga0501034_0057320 3300049571 Bacteria 3917
129 Ga0501036_0002056 3300049572 Bacteria 15684
130 Ga0501038_0001553 3300049574 Bacteria 21213
131 Ga0501039_0002004 3300049575 Bacteria 15069
132 Ga0501042_0002428 3300049578 Bacteria 11433
133 Ga0501046_0007705 3300049580 Bacteria 9440
134 Ga0501046_0034769 3300049580 Bacteria 4065
135 Ga0501046_0067294 3300049580 Bacteria 2789
136 Ga0501046_0079933 3300049580 Bacteria 2527
137 Ga0501047_0021328 3300049581 Bacteria 6218
138 Ga0501070_0103083 3300049586 Bacteria 2360
139 Ga0501071_0033595 3300049587 Bacteria 3644
140 Ga0501071_0059640 3300049587 Bacteria 2761
141 Ga0501072_0078522 3300049588 Bacteria 2613
142 Ga0501077_0107792 3300049593 Bacteria 1765
143 Ga0501243_000542 3300049675 Bacteria 5058
144 Ga0501080_0077622 3300049742 Bacteria 3089
145 Ga0501083_0130311 3300049744 Bacteria 1648
146 Ga0501035_0012152 3300049822 Bacteria 7961
147 Ga0501044_0001128 3300049823 Bacteria 31723
148 Ga0501044_0001263 3300049823 Bacteria 29893
149 nmdc:mga08y16_41144_c1 3300050511 Bacteria 4841
150 nmdc:mga0a205_15686_c1 3300050515 Bacteria 7079
151 Ga0500622_0015298 3300053156 Bacteria 4110
152 Ga0501084_0017185 3300054114 Bacteria 6010
153 Ga0530510_0036214 3300061734 Bacteria 3557
154 Ga0530510_0061922 3300061734 Bacteria 2709

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039437 Ga0436365_1028672 Ga0436365_1028672_21_1370 439
2 3300050515 nmdc:mga0a205_15686_c1 nmdc:mga0a205_15686_c1_144_1493 445
3 3300044694 Ga0466963_0174672 Ga0466963_0174672_20_1387 453
4 3300005468 Ga0070707_100156448 Ga0070707_1001564481 476
5 3300028800 Ga0265338_10011083 Ga0265338_100110836 480
6 3300028666 Ga0265336_10002502 Ga0265336_100025026 481
7 3300028800 Ga0265338_10002456 Ga0265338_100024563 481
8 3300029957 Ga0265324_10020180 Ga0265324_100201802 481
9 3300046516 Ga0495628_0096057 Ga0495628_0096057_634_2094 481
10 3300028800 Ga0265338_10009545 Ga0265338_100095453 486
11 3300005435 Ga0070714_100002904 Ga0070714_1000029044 489
12 3300037466 Ga0395898_0177274 Ga0395898_0177274_253_1737 489
13 3300037471 Ga0395905_0017123 Ga0395905_0017123_1714_3198 489
14 3300049744 Ga0501083_0130311 Ga0501083_0130311_22_1491 489
15 3300031995 Ga0307409_100014289 Ga0307409_1000142894 490
16 3300032002 Ga0307416_100013418 Ga0307416_1000134183 490
17 3300032126 Ga0307415_100001837 Ga0307415_1000018374 490
18 3300048919 Ga0496116_0000089 Ga0496116_0000089_165833_167338 497
19 3300048921 Ga0496118_0003190 Ga0496118_0003190_2407_3912 497
20 3300005535 Ga0070684_100067489 Ga0070684_1000674892 498
21 3300005614 Ga0068856_100008797 Ga0068856_1000087975 498
22 3300026078 Ga0207702_10014255 Ga0207702_100142555 498
23 3300031251 Ga0265327_10011175 Ga0265327_100111754 498
24 3300031711 Ga0265314_10093123 Ga0265314_100931232 498
25 iso_pu_bacteria 2896384573 2896385793 500
26 iso_pu_bacteria 2920760137 2920766464 500
27 3300037471 Ga0395905_0215482 Ga0395905_0215482_234_1748 501
28 iso_pu_bacteria 2838074704 2838079074 502
29 3300045051 Ga0451576_0006199 Ga0451576_0006199_7494_9077 503
30 3300045051 Ga0451576_0006689 Ga0451576_0006689_1559_3127 503
31 3300009094 Ga0111539_10255498 Ga0111539_102554981 504
32 iso_pu_bacteria 2996310559 2996314906 505
33 3300049587 Ga0501071_0059640 Ga0501071_0059640_246_1778 506
34 3300049588 Ga0501072_0078522 Ga0501072_0078522_398_1930 506
35 3300049593 Ga0501077_0107792 Ga0501077_0107792_76_1608 506
36 3300061734 Ga0530510_0061922 Ga0530510_0061922_625_2157 506
37 3300005842 Ga0068858_100015912 Ga0068858_1000159122 507
38 3300009177 Ga0105248_10022321 Ga0105248_100223216 507
39 3300025910 Ga0207684_10094630 Ga0207684_100946302 507
40 3300031249 Ga0265339_10021562 Ga0265339_100215622 507
41 3300049587 Ga0501071_0033595 Ga0501071_0033595_296_1843 507
42 3300049742 Ga0501080_0077622 Ga0501080_0077622_397_1944 507
43 3300054114 Ga0501084_0017185 Ga0501084_0017185_437_1984 507
44 3300061734 Ga0530510_0036214 Ga0530510_0036214_1747_3294 507
45 3300035207 Ga0373942_0006542 Ga0373942_0006542_909_2489 508
46 3300025922 Ga0207646_10086094 Ga0207646_100860942 509
47 3300009176 Ga0105242_10124723 Ga0105242_101247232 510
48 3300025917 Ga0207660_10148514 Ga0207660_101485142 510
49 3300025921 Ga0207652_10085916 Ga0207652_100859162 510
50 3300028563 Ga0265319_1010402 Ga0265319_10104024 510
51 3300028577 Ga0265318_10001187 Ga0265318_100011878 510
52 3300031240 Ga0265320_10025227 Ga0265320_100252273 510
53 3300031344 Ga0265316_10015511 Ga0265316_100155112 510
54 3300031595 Ga0265313_10002361 Ga0265313_100023614 510
55 3300031727 Ga0316576_10013075 Ga0316576_100130754 510
56 3300031727 Ga0316576_10116275 Ga0316576_101162751 510
57 3300046477 Ga0495664_0051247 Ga0495664_0051247_697_2283 510
58 3300047319 Ga0495674_0047073 Ga0495674_0047073_627_2213 510
59 3300005334 Ga0068869_100000086 Ga0068869_10000008628 511
60 3300005459 Ga0068867_100027131 Ga0068867_1000271313 511
61 3300005718 Ga0068866_10012107 Ga0068866_100121073 511
62 3300006358 Ga0068871_100009884 Ga0068871_1000098845 511
63 3300006881 Ga0068865_100032234 Ga0068865_1000322343 511
64 3300025942 Ga0207689_10000023 Ga0207689_1000002397 511
65 3300026089 Ga0207648_10001277 Ga0207648_1000127716 511
66 3300044712 Ga0453684_0058965 Ga0453684_0058965_2818_4398 511
67 3300031251 Ga0265327_10016066 Ga0265327_100160663 512
68 3300003323 rootH1_10045609 rootH1_100456093 513
69 3300044712 Ga0453684_0079405 Ga0453684_0079405_1184_2839 515
70 3300028556 Ga0265337_1012691 Ga0265337_10126912 516
71 3300028577 Ga0265318_10002302 Ga0265318_100023028 516
72 3300029957 Ga0265324_10002505 Ga0265324_100025054 516
73 3300031240 Ga0265320_10033369 Ga0265320_100333693 516
74 3300031344 Ga0265316_10002267 Ga0265316_100022674 516
75 3300045051 Ga0451576_0003943 Ga0451576_0003943_3117_4697 516
76 3300005329 Ga0070683_100004314 Ga0070683_1000043144 518
77 3300025944 Ga0207661_10021565 Ga0207661_100215654 518
78 3300026078 Ga0207702_10161986 Ga0207702_101619862 518
79 3300042876 Ga0451577_0000150 Ga0451577_0000150_50617_52200 518
80 3300044673 Ga0453683_0000939 Ga0453683_0000939_685_2268 518
81 3300045051 Ga0451576_0003519 Ga0451576_0003519_2888_4468 518
82 3300045051 Ga0451576_0112122 Ga0451576_0112122_641_2224 518
83 3300028556 Ga0265337_1002293 Ga0265337_10022932 519
84 3300031548 Ga0307408_100000033 Ga0307408_10000003353 519
85 3300031852 Ga0307410_10000025 Ga0307410_1000002535 519
86 3300031911 Ga0307412_10020294 Ga0307412_100202943 519
87 3300031995 Ga0307409_100000036 Ga0307409_10000003635 519
88 3300032002 Ga0307416_100000061 Ga0307416_10000006166 519
89 3300028563 Ga0265319_1001484 Ga0265319_10014842 521
90 3300031240 Ga0265320_10002453 Ga0265320_100024532 521
91 3300031240 Ga0265320_10000009 Ga0265320_10000009141 523
92 iso_pu_bacteria 2786546940 2788435971 523
93 3300009094 Ga0111539_10006213 Ga0111539_100062133 524
94 3300050511 nmdc:mga08y16_41144_c1 nmdc:mga08y16_41144_c1_1216_2883 524
95 3300028556 Ga0265337_1013995 Ga0265337_10139952 525
96 3300042876 Ga0451577_0002064 Ga0451577_0002064_4315_6147 525
97 3300028563 Ga0265319_1009767 Ga0265319_10097672 526
98 3300031344 Ga0265316_10021367 Ga0265316_100213674 526
99 3300006028 Ga0070717_10000125 Ga0070717_1000012537 527
100 3300028563 Ga0265319_1006806 Ga0265319_10068064 527
101 3300042876 Ga0451577_0011518 Ga0451577_0011518_2725_4308 527
102 3300049569 Ga0501032_0004077 Ga0501032_0004077_8347_9930 527
103 3300049570 Ga0501033_0009875 Ga0501033_0009875_4684_6267 527
104 3300049572 Ga0501036_0002056 Ga0501036_0002056_7210_8793 527
105 3300049574 Ga0501038_0001553 Ga0501038_0001553_18917_20500 527
106 3300049575 Ga0501039_0002004 Ga0501039_0002004_6265_7848 527
107 3300049578 Ga0501042_0002428 Ga0501042_0002428_362_1945 527
108 3300049580 Ga0501046_0067294 Ga0501046_0067294_776_2359 527
109 3300049586 Ga0501070_0103083 Ga0501070_0103083_15_1598 527
110 3300049822 Ga0501035_0012152 Ga0501035_0012152_5948_7531 527
111 3300005436 Ga0070713_100032438 Ga0070713_1000324381 528
112 3300025928 Ga0207700_10005047 Ga0207700_100050473 528
113 3300031251 Ga0265327_10000037 Ga0265327_1000003713 528
114 3300028556 Ga0265337_1006860 Ga0265337_10068602 529
115 3300028563 Ga0265319_1000206 Ga0265319_100020613 529
116 3300028563 Ga0265319_1002551 Ga0265319_100255111 529
117 3300028563 Ga0265319_1013649 Ga0265319_10136492 529
118 3300028577 Ga0265318_10000528 Ga0265318_1000052817 529
119 3300028577 Ga0265318_10002852 Ga0265318_100028524 529
120 3300028800 Ga0265338_10001187 Ga0265338_1000118729 529
121 3300031240 Ga0265320_10000301 Ga0265320_1000030111 529
122 3300031240 Ga0265320_10000610 Ga0265320_1000061011 529
123 3300031240 Ga0265320_10006134 Ga0265320_100061342 529
124 3300031240 Ga0265320_10010196 Ga0265320_100101964 529
125 3300031240 Ga0265320_10019590 Ga0265320_100195901 529
126 3300031240 Ga0265320_10022131 Ga0265320_100221313 529
127 3300031251 Ga0265327_10062784 Ga0265327_100627841 529
128 3300031595 Ga0265313_10001344 Ga0265313_100013442 529
129 3300031595 Ga0265313_10002083 Ga0265313_100020833 529
130 3300031711 Ga0265314_10008945 Ga0265314_100089452 529
131 3300049571 Ga0501034_0057320 Ga0501034_0057320_1944_3533 529
132 3300053156 Ga0500622_0015298 Ga0500622_0015298_1233_2822 529
133 3300003320 rootH2_10005815 rootH2_100058156 530
134 3300005329 Ga0070683_100026044 Ga0070683_1000260443 530
135 3300005530 Ga0070679_100006764 Ga0070679_1000067647 530
136 3300025944 Ga0207661_10038201 Ga0207661_100382013 530
137 3300028563 Ga0265319_1000032 Ga0265319_100003222 530
138 3300028573 Ga0265334_10010008 Ga0265334_100100083 530
139 3300028577 Ga0265318_10000075 Ga0265318_1000007534 530
140 3300028577 Ga0265318_10001519 Ga0265318_100015195 530
141 3300028666 Ga0265336_10009859 Ga0265336_100098593 530
142 3300031240 Ga0265320_10001363 Ga0265320_1000136310 530
143 3300031240 Ga0265320_10004685 Ga0265320_100046854 530
144 3300031250 Ga0265331_10004724 Ga0265331_100047245 530
145 3300031595 Ga0265313_10004080 Ga0265313_100040805 530
146 3300031616 Ga0307508_10001681 Ga0307508_1000168115 530
147 3300031711 Ga0265314_10002491 Ga0265314_1000249110 530
148 3300031711 Ga0265314_10002815 Ga0265314_100028156 530
149 3300031711 Ga0265314_10017604 Ga0265314_100176044 530
150 3300037471 Ga0395905_0000015 Ga0395905_0000015_285595_287187 530
151 3300044712 Ga0453684_0028404 Ga0453684_0028404_2625_4217 530
152 3300049569 Ga0501032_0002151 Ga0501032_0002151_10085_11677 530
153 3300049580 Ga0501046_0007705 Ga0501046_0007705_680_2272 530
154 3300049580 Ga0501046_0034769 Ga0501046_0034769_1276_2868 530
155 3300049580 Ga0501046_0079933 Ga0501046_0079933_807_2399 530
156 3300049581 Ga0501047_0021328 Ga0501047_0021328_3926_5518 530
157 3300049675 Ga0501243_000542 Ga0501243_000542_2057_3676 530
158 3300049823 Ga0501044_0001128 Ga0501044_0001128_430_2022 530
159 3300049823 Ga0501044_0001263 Ga0501044_0001263_19056_20648 530

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01676

Metalloenzyme

Metalloenzyme superfamily

3

543

0.97

PF06415

iPGM_N

BPG-independent PGAM N-terminus (iPGM_N)

84

333

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ify-assembly1.cif.gz_A structure of bacillus anthracis cofactor-independent phosphoglucerate mutase 0.9366 5 529
2ify-assembly1.cif.gz_A structure of bacillus anthracis cofactor-independent phosphoglucerate mutase 0.9349 5 529
7knf-assembly2.cif.gz_B 1.80a resolution structure of independent phosphoglycerate mutase from c. elegans in complex with a macrocyclic peptide inhibitor (ce-1 nhoh) 0.9127 4 529
7knf-assembly1.cif.gz_A 1.80a resolution structure of independent phosphoglycerate mutase from c. elegans in complex with a macrocyclic peptide inhibitor (ce-1 nhoh) 0.9085 4 529
7knf-assembly2.cif.gz_B 1.80a resolution structure of independent phosphoglycerate mutase from c. elegans in complex with a macrocyclic peptide inhibitor (ce-1 nhoh) 0.9078 4 529
ID Description Score Start End Superfamily
af_Q2G029_311_465_3.40.720.10 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.9703 331 483 3.40.720.10
1ejjA02 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.97 5 529 3.40.720.10
1ejjA02 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.9665 5 529 3.40.720.10
4qaxA02 Alpha Beta;3-Layer(aba) Sandwich;2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain;BPG-independent phosphoglycerate mutase, domain B 0.9465 82 324 3.40.1450.10
af_Q2G029_311_465_3.40.720.10 Alpha Beta;3-Layer(aba) Sandwich;Alkaline Phosphatase, subunit A;Alkaline Phosphatase, subunit A 0.9459 331 483 3.40.720.10
ID Description Score Start End GO Terms
AF-A0A3C0JHN7-F1-model_v4 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.9919 383 488 GO:0005829
GO:0006007
GO:0030145
GO:0046537
AF-A0A6N6X6J0-F1-model_v4 deleted 0.9914 365 487
AF-A0A2A2Q9B5-F1-model_v4 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.12) 0.9902 1 530 GO:0005829
GO:0006007
GO:0006096
GO:0030145
GO:0046537
AF-A0A2A2Q9B5-F1-model_v4 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (iPGM) (EC 5.4.2.12) 0.9883 1 530 GO:0005829
GO:0006007
GO:0006096
GO:0030145
GO:0046537
AF-A0A3C1B4X6-F1-model_v4 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.9789 352 529 GO:0006007
GO:0030145
GO:0046537

Feature Viewer

pLDDT pTM Quality
94.52 0.88 High
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Predicted Structure (AlphaFold2)

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