F231191

General Info

Members Datasets Scaffolds Average Seq Length
159 110 318 408

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10026199|Ga0070658_100261993
Length 441
Sequence VPNIGRMSGARAGLPAGRRENIITGCDAIRSRTDSPQRESMKALLPALLLFAACTPAPGSSVVLPGIDVFIADIPAALRGRRVALITNQSGISRAGTSDIDLIAQSKDLKLVALMAAEHGIRGVEDAGAHVSTTTDAKTGLPIYSLYESEDRGPTPKMLENVDAIVYDLQEVGGRTWTYVSTMALAMQAAAKKGIPFVVLDRPDPIGGEIVEGALLDTAYRSFVGMYPIPARHGMTVGELATLFNRKYGIGADLIVIRAANWHRTQWMDDTGLPWVNPSPNLRSLAALNDYPGTVYFEGTNLTEGRGTDRPFEQIGASWLNAAAVASAMNAKQLPGIRFEPITMSVLKTAAKFPGQTIPAIRFVITDRETYRPVRTALILIDEIKRQQPNDFKWGGTIDRLTGSDKVRKAIDAGRLPELLVEWDREAAAFKRDREPYLLYR

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
24 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
29 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
30 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
31 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
32 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
33 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
41 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
42 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
71 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
73 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
74 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
79 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
80 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
81 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
84 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
85 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
86 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
87 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
88 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
89 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
90 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
98 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
99 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
100 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
101 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
102 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
103 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
104 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
105 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
106 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
107 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
108 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
109 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
110 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.81
Nodule 0
Rhizoplane 0
Rhizosphere 89.94
Stem 0
Stem Tuber 0
Unclassified 13.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10026199 3300005327 Bacteria 4677
2 Ga0070658_10030593 3300005327 Bacteria 4324
3 Ga0070658_10040888 3300005327 Bacteria 3740
4 Ga0070670_100006626 3300005331 Bacteria 9815
5 Ga0070680_100018276 3300005336 Bacteria 5538
6 Ga0070687_100022474 3300005343 Bacteria 2982
7 Ga0070661_100030768 3300005344 Bacteria 3879
8 Ga0070669_100006056 3300005353 Bacteria 8727
9 Ga0070675_100004714 3300005354 Bacteria 10410
10 Ga0070671_100031694 3300005355 Bacteria 4369
11 Ga0070674_100081771 3300005356 Bacteria 2309
12 Ga0070673_100115991 3300005364 Bacteria 2227
13 Ga0070688_100030033 3300005365 Bacteria 3259
14 Ga0070659_100088994 3300005366 Unclassified 2473
15 Ga0070681_10161548 3300005458 Bacteria 2164
16 Ga0070698_100007624 3300005471 Bacteria 11713
17 Ga0070679_100217113 3300005530 Bacteria 1874
18 Ga0070672_100034097 3300005543 Bacteria 3861
19 Ga0070665_100104318 3300005548 Bacteria 2837
20 Ga0070665_100183014 3300005548 Unclassified 2096
21 Ga0070665_100210116 3300005548 Bacteria 1947
22 Ga0070665_100230149 3300005548 Bacteria 1853
23 Ga0068857_100046827 3300005577 Bacteria 3838
24 Ga0068857_100162550 3300005577 Bacteria 2026
25 Ga0068859_100172754 3300005617 Bacteria 2243
26 Ga0068859_100328204 3300005617 Bacteria 1624
27 Ga0068864_100285790 3300005618 Bacteria 1541
28 Ga0068870_10009003 3300005840 Bacteria 4517
29 Ga0068862_100004865 3300005844 Bacteria 11308
30 Ga0068862_100115447 3300005844 Bacteria 2361
31 Ga0075365_10008002 3300006038 Bacteria 5966
32 Ga0075368_10006652 3300006042 Bacteria 4052
33 Ga0075368_10008264 3300006042 Bacteria 3700
34 Ga0075363_100067660 3300006048 Unclassified 1936
35 Ga0075364_10020940 3300006051 Bacteria 4118
36 Ga0075367_10008748 3300006178 Bacteria 5261
37 Ga0075367_10022279 3300006178 Bacteria 3551
38 Ga0075366_10026192 3300006195 Bacteria 3415
39 Ga0075428_100001091 3300006844 Bacteria 28871
40 Ga0075428_100016829 3300006844 Bacteria 8075
41 Ga0075428_100408151 3300006844 Unclassified 1456
42 Ga0075430_100001928 3300006846 Bacteria 17023
43 Ga0075430_100002315 3300006846 Bacteria 15820
44 Ga0075430_100011704 3300006846 Bacteria 7467
45 Ga0075430_100046328 3300006846 Bacteria 3672
46 Ga0075431_100068057 3300006847 Bacteria 3675
47 Ga0075431_100115691 3300006847 Bacteria 2769
48 Ga0075433_10075007 3300006852 Bacteria 2976
49 Ga0075429_100000529 3300006880 Bacteria 28983
50 Ga0075429_100236137 3300006880 Bacteria 1601
51 Ga0097620_100172756 3300006931 Bacteria 2243
52 Ga0097620_100328182 3300006931 Bacteria 1624
53 Ga0111539_10000868 3300009094 Bacteria 39485
54 Ga0111539_10063688 3300009094 Bacteria 4363
55 Ga0111539_10103108 3300009094 Bacteria 3348
56 Ga0111539_10421413 3300009094 Unclassified 1555
57 Ga0114129_10138393 3300009147 Bacteria 3340
58 Ga0114129_10329839 3300009147 Bacteria 2026
59 Ga0105242_10102855 3300009176 Bacteria 2423
60 Ga0105248_10103057 3300009177 Unclassified 3216
61 Ga0105249_10000970 3300009553 Bacteria 25417
62 Ga0105249_10059522 3300009553 Bacteria 3503
63 Ga0157373_10023063 3300013100 Bacteria 4513
64 Ga0157373_10229168 3300013100 Bacteria 1312
65 Ga0157374_10124074 3300013296 Bacteria 2495
66 Ga0157378_10130763 3300013297 Unclassified 2323
67 Ga0157372_10047270 3300013307 Bacteria 4781
68 Ga0157372_10438464 3300013307 Bacteria 1523
69 Ga0157375_10014696 3300013308 Bacteria 6994
70 Ga0157375_10049631 3300013308 Bacteria 4113
71 Ga0157380_10101041 3300014326 Bacteria 2402
72 Ga0157376_10387925 3300014969 Unclassified 1347
73 Ga0213876_10017024 3300021384 Bacteria 3839
74 Ga0207688_10011235 3300025901 Bacteria 4872
75 Ga0207643_10008413 3300025908 Bacteria 5536
76 Ga0207705_10208197 3300025909 Bacteria 1483
77 Ga0207707_10125876 3300025912 Bacteria 2241
78 Ga0207662_10028652 3300025918 Bacteria 3222
79 Ga0207657_10020605 3300025919 Bacteria 6227
80 Ga0207649_10026065 3300025920 Bacteria 3416
81 Ga0207652_10116140 3300025921 Bacteria 2377
82 Ga0207681_10022282 3300025923 Bacteria 4039
83 Ga0207650_10108034 3300025925 Unclassified 2150
84 Ga0207659_10003354 3300025926 Bacteria 9606
85 Ga0207659_10067877 3300025926 Bacteria 2592
86 Ga0207706_10158227 3300025933 Unclassified 1992
87 Ga0207686_10094701 3300025934 Bacteria 1980
88 Ga0207670_10019153 3300025936 Bacteria 4173
89 Ga0207669_10210876 3300025937 Unclassified 1418
90 Ga0207691_10004690 3300025940 Bacteria 13237
91 Ga0207691_10013865 3300025940 Bacteria 7692
92 Ga0207691_10152974 3300025940 Bacteria 2027
93 Ga0207691_10193251 3300025940 Bacteria 1774
94 Ga0207712_10102273 3300025961 Bacteria 2133
95 Ga0207708_10063881 3300026075 Bacteria 2812
96 Ga0207708_10224117 3300026075 Bacteria 1507
97 Ga0207676_10255942 3300026095 Bacteria 1578
98 Ga0207674_10134445 3300026116 Bacteria 2435
99 Ga0209999_1001038 3300027543 Bacteria 4717
100 Ga0209971_1014356 3300027682 Unclassified 1877
101 Ga0209966_1001219 3300027695 Bacteria 4582
102 Ga0209998_10001491 3300027717 Bacteria 5640
103 Ga0209813_10010950 3300027866 Bacteria 2358
104 Ga0207428_10004338 3300027907 Bacteria 13547
105 Ga0207428_10180340 3300027907 Bacteria 1596
106 Ga0268266_10126999 3300028379 Bacteria 2277
107 Ga0268266_10172087 3300028379 Bacteria 1966
108 Ga0268266_10206581 3300028379 Unclassified 1800
109 Ga0268265_10160957 3300028380 Bacteria 1906
110 Ga0307408_100111993 3300031548 Bacteria 2098
111 Ga0307405_10001763 3300031731 Bacteria 9256
112 Ga0307405_10004451 3300031731 Bacteria 6624
113 Ga0307413_10006241 3300031824 Bacteria 5413
114 Ga0307413_10043807 3300031824 Bacteria 2640
115 Ga0307410_10008117 3300031852 Bacteria 5798
116 Ga0307410_10039112 3300031852 Bacteria 3112
117 Ga0307407_10077965 3300031903 Bacteria 1994
118 Ga0307412_10006395 3300031911 Bacteria 6660
119 Ga0307412_10035521 3300031911 Bacteria 3185
120 Ga0307409_100033704 3300031995 Bacteria 3729
121 Ga0307414_10039169 3300032004 Bacteria 3190
122 Ga0307414_10126011 3300032004 Bacteria 1979
123 Ga0307411_10009279 3300032005 Bacteria 5161
124 Ga0307415_100014392 3300032126 Bacteria 4649
125 Ga0436365_1091753 3300039437 Bacteria 5391
126 Ga0451576_0128142 3300045051 Bacteria 2645
127 Ga0495638_0002574 3300046460 Bacteria 14676
128 Ga0495672_0009475 3300047320 Bacteria 7053
129 Ga0495672_0026775 3300047320 Unclassified 3674
130 Ga0501031_0070355 3300049568 Unclassified 2279
131 Ga0501034_0310745 3300049571 Unclassified 1511
132 Ga0501037_0061143 3300049573 Bacteria 2747
133 Ga0501038_0157717 3300049574 Unclassified 1847
134 Ga0501040_0073074 3300049576 Unclassified 2369
135 Ga0501041_0093962 3300049577 Bacteria 1852
136 Ga0501047_0008361 3300049581 Bacteria 9768
137 Ga0501070_0087069 3300049586 Bacteria 2586
138 Ga0501071_0110526 3300049587 Bacteria 2031
139 Ga0501076_0053071 3300049592 Bacteria 3212
140 Ga0501076_0066472 3300049592 Bacteria 2878
141 Ga0501217_002906 3300049661 Bacteria 3428
142 Ga0501079_0139872 3300049741 Bacteria 1886
143 Ga0501045_0039707 3300049824 Bacteria 3425
144 Ga0501045_0054584 3300049824 Bacteria 2921
145 Ga0501045_0208369 3300049824 Bacteria 1456
146 nmdc:mga06z11_107814_c1 3300050494 Bacteria 1538
147 nmdc:mga06z11_13995_c1 3300050494 Bacteria 3539
148 nmdc:mga06z11_35554_c1 3300050494 Unclassified 2453
149 nmdc:mga04h51_2280_c1 3300050495 Bacteria 4529
150 nmdc:mga05p37_49509_c1 3300050507 Bacteria 5169
151 nmdc:mga09592_137761_c1 3300050508 Unclassified 2103
152 nmdc:mga09592_96203_c1 3300050508 Bacteria 2533
153 nmdc:mga06r32_182195_c1 3300050510 Unclassified 2086
154 nmdc:mga06r32_36549_c1 3300050510 Bacteria 4642
155 nmdc:mga08y16_222255_c1 3300050511 Bacteria 1955
156 nmdc:mga08y16_339143_c1 3300050511 Unclassified 1545
157 nmdc:mga08y16_38225_c1 3300050511 Bacteria 5041
158 Ga0500568_0037872 3300053139 Bacteria 1954
159 Ga0501084_0037196 3300054114 Bacteria 4067
160 Ga0070658_10026199
161 Ga0070658_10030593
162 Ga0070658_10040888
163 Ga0070670_100006626
164 Ga0070680_100018276
165 Ga0070687_100022474
166 Ga0070661_100030768
167 Ga0070669_100006056
168 Ga0070675_100004714
169 Ga0070671_100031694
170 Ga0070674_100081771
171 Ga0070673_100115991
172 Ga0070688_100030033
173 Ga0070659_100088994
174 Ga0070681_10161548
175 Ga0070698_100007624
176 Ga0070679_100217113
177 Ga0070672_100034097
178 Ga0070665_100104318
179 Ga0070665_100183014
180 Ga0070665_100210116
181 Ga0070665_100230149
182 Ga0068857_100046827
183 Ga0068857_100162550
184 Ga0068859_100172754
185 Ga0068859_100328204
186 Ga0068864_100285790
187 Ga0068870_10009003
188 Ga0068862_100004865
189 Ga0068862_100115447
190 Ga0075365_10008002
191 Ga0075368_10006652
192 Ga0075368_10008264
193 Ga0075363_100067660
194 Ga0075364_10020940
195 Ga0075367_10008748
196 Ga0075367_10022279
197 Ga0075366_10026192
198 Ga0075428_100001091
199 Ga0075428_100016829
200 Ga0075428_100408151
201 Ga0075430_100001928
202 Ga0075430_100002315
203 Ga0075430_100011704
204 Ga0075430_100046328
205 Ga0075431_100068057
206 Ga0075431_100115691
207 Ga0075433_10075007
208 Ga0075429_100000529
209 Ga0075429_100236137
210 Ga0097620_100172756
211 Ga0097620_100328182
212 Ga0111539_10000868
213 Ga0111539_10063688
214 Ga0111539_10103108
215 Ga0111539_10421413
216 Ga0114129_10138393
217 Ga0114129_10329839
218 Ga0105242_10102855
219 Ga0105248_10103057
220 Ga0105249_10000970
221 Ga0105249_10059522
222 Ga0157373_10023063
223 Ga0157373_10229168
224 Ga0157374_10124074
225 Ga0157378_10130763
226 Ga0157372_10047270
227 Ga0157372_10438464
228 Ga0157375_10014696
229 Ga0157375_10049631
230 Ga0157380_10101041
231 Ga0157376_10387925
232 Ga0213876_10017024
233 Ga0207688_10011235
234 Ga0207643_10008413
235 Ga0207705_10208197
236 Ga0207707_10125876
237 Ga0207662_10028652
238 Ga0207657_10020605
239 Ga0207649_10026065
240 Ga0207652_10116140
241 Ga0207681_10022282
242 Ga0207650_10108034
243 Ga0207659_10003354
244 Ga0207659_10067877
245 Ga0207706_10158227
246 Ga0207686_10094701
247 Ga0207670_10019153
248 Ga0207669_10210876
249 Ga0207691_10004690
250 Ga0207691_10013865
251 Ga0207691_10152974
252 Ga0207691_10193251
253 Ga0207712_10102273
254 Ga0207708_10063881
255 Ga0207708_10224117
256 Ga0207676_10255942
257 Ga0207674_10134445
258 Ga0209999_1001038
259 Ga0209971_1014356
260 Ga0209966_1001219
261 Ga0209998_10001491
262 Ga0209813_10010950
263 Ga0207428_10004338
264 Ga0207428_10180340
265 Ga0268266_10126999
266 Ga0268266_10172087
267 Ga0268266_10206581
268 Ga0268265_10160957
269 Ga0307408_100111993
270 Ga0307405_10001763
271 Ga0307405_10004451
272 Ga0307413_10006241
273 Ga0307413_10043807
274 Ga0307410_10008117
275 Ga0307410_10039112
276 Ga0307407_10077965
277 Ga0307412_10006395
278 Ga0307412_10035521
279 Ga0307409_100033704
280 Ga0307414_10039169
281 Ga0307414_10126011
282 Ga0307411_10009279
283 Ga0307415_100014392
284 Ga0436365_1091753
285 Ga0451576_0128142
286 Ga0495638_0002574
287 Ga0495672_0009475
288 Ga0495672_0026775
289 Ga0501031_0070355
290 Ga0501034_0310745
291 Ga0501037_0061143
292 Ga0501038_0157717
293 Ga0501040_0073074
294 Ga0501041_0093962
295 Ga0501047_0008361
296 Ga0501070_0087069
297 Ga0501071_0110526
298 Ga0501076_0053071
299 Ga0501076_0066472
300 Ga0501217_002906
301 Ga0501079_0139872
302 Ga0501045_0039707
303 Ga0501045_0054584
304 Ga0501045_0208369
305 nmdc:mga06z11_107814_c1
306 nmdc:mga06z11_13995_c1
307 nmdc:mga06z11_35554_c1
308 nmdc:mga04h51_2280_c1
309 nmdc:mga05p37_49509_c1
310 nmdc:mga09592_137761_c1
311 nmdc:mga09592_96203_c1
312 nmdc:mga06r32_182195_c1
313 nmdc:mga06r32_36549_c1
314 nmdc:mga08y16_222255_c1
315 nmdc:mga08y16_339143_c1
316 nmdc:mga08y16_38225_c1
317 Ga0500568_0037872
318 Ga0501084_0037196

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07075

NamZ_N

Exo-beta-N-acetylmuramidase NamZ, N-terminal

83

286

0.99

PF20732

NamZ_C

Exo-beta-N-acetylmuramidase NamZ, C-terminal

289

440

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4k05-assembly1.cif.gz_A crystal structure of a duf1343 family protein (bf0371) from bacteroides fragilis nctc 9343 at 1.65 a resolution 0.926 63 441
4k05-assembly1.cif.gz_A crystal structure of a duf1343 family protein (bf0371) from bacteroides fragilis nctc 9343 at 1.65 a resolution 0.9119 63 441
4jja-assembly1.cif.gz_A crystal structure of a duf1343 family protein (bf0379) from bacteroides fragilis nctc 9343 at 1.30 a resolution 0.8244 61 441
4jja-assembly1.cif.gz_A crystal structure of a duf1343 family protein (bf0379) from bacteroides fragilis nctc 9343 at 1.30 a resolution 0.8178 61 441
6gpa-assembly2.cif.gz_B beta-1,4-galactanase from bacteroides thetaiotaomicron with galactose 0.6036 148 199
ID Description Score Start End Superfamily
4k05B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Uncharacterised protein PF07075, DUF1343 0.9133 63 278 3.40.50.12170
4k05B02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1; 0.8635 279 412 3.90.1150.140
4k05B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Uncharacterised protein PF07075, DUF1343 0.8315 63 278 3.40.50.12170
4k05B02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1; 0.7773 279 412 3.90.1150.140
2g0tA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.5841 79 199 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2V7TQV1-F1-model_v4 DUF1343 domain-containing protein 0.9794 235 396 GO:0033922
AF-A0A2V7XMA2-F1-model_v4 DUF1343 domain-containing protein 0.9716 184 357 GO:0033922
AF-A0A101XDN9-F1-model_v4 DUF1343 domain-containing protein 0.9708 201 440 GO:0033922
AF-A0A838QGK9-F1-model_v4 DUF1343 domain-containing protein 0.9704 201 441 GO:0033922
AF-A0A383ERJ8-F1-model_v4 DUF1343 domain-containing protein 0.9702 170 396 GO:0033922

Map