F230570
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 158 | 134 | 316 | 503 |
Family's Representative Sequence
| Representative Sequence | 3300048914|Ga0496111_0020591|Ga0496111_0020591_1579_3417 |
| Length | 604 |
| Sequence | VLVVGPAPVPAGDVALVGAGTTSTTGADEAVPVGVGAAPARVGVAEWVVGATPPTAHAMPAEAXXXTVASTTTGPWLRAALCRPILEVFHGTAHPGARGSMGWVSEQQKQADNRARATTDEFRAFVREGWAPRGSEVSGPAPAAAHAAARRAVLSAAYPRQRLVVPAGGLKVRSNDTDYVFRPHTAFAWLTGLGADREPDAVLVLEPVTGDDGTASGHEAVLYFRPLGERDSDEFFADARYGEFWVGARPTLADVELELGITARHIDGFDAAVAKDAGEVTVRLVRDADLELTARLDAARVENGAAEEGLQESDDALAHDISHLRMRKDDHEVEQMRAAVAATHHGFEAMIAELQRAVEEGRGERWLEGTFGLHARHRGNGVGYDSICAAGDHANTLHWIKNTGEVRDGDLVLIDAGVEVDSLYTADITRTLPVSGTFTDAQREVYDAVYAAQEAGIAAVKPGAKFSDVHAAAIRVIAEQLHAWGLLPEGVSVEDTLDKEHGQYHRRWMVHGTSHHLGLDVHDCALATREEYMDAVLEPGMVLTVEPGLYFKADDLLAPERFRGIGVRIEDDVVVTEDGCENLSAAMPRSSADVEAWIARVQGA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 2 | 3300001989 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 | Metagenome | Rhizosphere |
| 3 | 3300003760 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 | Metagenome | Endosphere |
| 4 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 6 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 8 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 9 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 10 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 11 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 12 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 13 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 14 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 15 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 16 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 17 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 18 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 19 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 20 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 21 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 22 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 23 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 24 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 25 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 26 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 32 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 33 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 34 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 35 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 36 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 37 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 38 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 39 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 40 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 41 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 42 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 43 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 44 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 45 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 46 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 47 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 48 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 49 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 50 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 51 | 3300041456 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG | Metagenome | Rhizoplane |
| 52 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 53 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 54 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 55 | 3300042128 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 | Metagenome | Rhizosphere |
| 56 | 3300042131 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 | Metagenome | Rhizosphere |
| 57 | 3300046492 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere | Metagenome | Rhizosphere |
| 58 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 59 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 60 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 61 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 63 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 64 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 65 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 66 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 67 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 68 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 69 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 70 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 71 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 72 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 73 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 74 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 75 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 76 | 3300049130 | Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 77 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 78 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 79 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 80 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 81 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 82 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 83 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 84 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 85 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 86 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 87 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 88 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 89 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 90 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 91 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 92 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 93 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 94 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 95 | 2515154088 | Salinispora arenicola CNT800 | Isolate | Rhizosphere |
| 96 | 2515154129 | Salinispora pacifica CNS103 | Isolate | Rhizosphere |
| 97 | 2515154137 | Salinispora arenicola CNX482 | Isolate | Rhizosphere |
| 98 | 2515154202 | Salinispora pacifica CNT084 | Isolate | Rhizosphere |
| 99 | 2515154203 | Salinispora arenicola CNR921 | Isolate | Rhizosphere |
| 100 | 2585428094 | Herbiconiux sp. YR403 | Isolate | Rhizosphere |
| 101 | 2643221567 | Phycicoccus sp. Root563 | Isolate | Unclassified |
| 102 | 2643221613 | Oerskovia sp. Root22 | Isolate | Unclassified |
| 103 | 2643221624 | Phycicoccus sp. Root101 | Isolate | Unclassified |
| 104 | 2643221649 | Leifsonia sp. Root4 | Isolate | Unclassified |
| 105 | 2643221690 | Cellulomonas sp. Root485 | Isolate | Unclassified |
| 106 | 2643221694 | Cellulomonas sp. Root137 | Isolate | Unclassified |
| 107 | 2643221721 | Oerskovia sp. Root918 | Isolate | Unclassified |
| 108 | 2643221722 | Cellulomonas sp. Root930 | Isolate | Unclassified |
| 109 | 2739367653 | Kocuria sp. OV113 | Isolate | Unclassified |
| 110 | 2808606365 | Phycicoccus sp. SLBN-51 | Isolate | Unclassified |
| 111 | 2808606372 | Agromyces sp. 23-23 | Isolate | Unclassified |
| 112 | 2808606700 | Arthrobacter agilis UMCV2 | Isolate | Rhizosphere |
| 113 | 2811994880 | Cellulomonas sp. SLBN-39 | Isolate | Unclassified |
| 114 | 2816332305 | Kocuria rhizophila FDAARGOS_302 | Isolate | Rhizosphere |
| 115 | 2839986021 | Cellulosimicrobium cellulans JZ5 | Isolate | Unclassified |
| 116 | 2852677369 | Pseudoclavibacter sp. JAI123 | Isolate | Rhizosphere |
| 117 | 2857479173 | Micrococcus sp. R-74225 | Isolate | Unclassified |
| 118 | 2857632687 | Micrococcus sp. R-73081 | Isolate | Unclassified |
| 119 | 2857727296 | Kocuria sp. R-72562 | Isolate | Unclassified |
| 120 | 2870801768 | Micrococcus endophyticus DSM 17945 | Isolate | Unclassified |
| 121 | 2870804320 | Micrococcus yunnanensis DSM 21948 | Isolate | Unclassified |
| 122 | 2884994152 | Cellulomonas sp. H30R-01 | Isolate | Rhizosphere |
| 123 | 2905926851 | Arthrobacter sedimenti MIC A30 | Isolate | Rhizosphere |
| 124 | 2919446982 | Phycicoccus sp. 3266 | Isolate | Rhizosphere |
| 125 | 2920879853 | Kocuria salina CV6 | Isolate | Unclassified |
| 126 | 2932431166 | Cellulosimicrobium sp. 4261 | Isolate | Rhizosphere |
| 127 | 2935890801 | Oerskovia enterophila 3230 | Isolate | Rhizosphere |
| 128 | 2946003308 | Arthrobacter agilis W3I6 | Isolate | Rhizosphere |
| 129 | 2966924647 | Frigoribacterium sp. 2355 | Isolate | Rhizosphere |
| 130 | 2997600082 | Streptomyces coffeae CA1R205 | Isolate | Unclassified |
| 131 | 3001889506 | Janibacter sp. YIM B02568 | Isolate | Unclassified |
| 132 | 3006321560 | Actinacidiphila epipremni PRB2-1 | Isolate | Unclassified |
| 133 | 8048127548 | Streptomyces samsunensis DSM 42010 | Isolate | Rhizosphere |
| 134 | 8056060235 | Nocardiopsis endophytica RSe5-2 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 74.05 |
| Metatranscriptomes | 0.63 |
| Isolates | 25.32 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.43 |
| Nodule | 0 |
| Rhizoplane | 5.7 |
| Rhizosphere | 63.92 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0496111_0020591 | 3300048914 | Bacteria | 4593 |
| 2 | JGI24739J22299_10011678 | 3300001989 | Bacteria | 3238 |
| 3 | Ga0055527_1000012 | 3300003760 | Bacteria | 348744 |
| 4 | Ga0070658_10068393 | 3300005327 | Bacteria | 2903 |
| 5 | Ga0068869_100082372 | 3300005334 | Bacteria | 2404 |
| 6 | Ga0070667_100027900 | 3300005367 | Bacteria | 4698 |
| 7 | Ga0068852_100017452 | 3300005616 | Bacteria | 5632 |
| 8 | Ga0068858_100000003 | 3300005842 | Bacteria | 349151 |
| 9 | Ga0081540_1028348 | 3300005983 | Bacteria | 3146 |
| 10 | Ga0081539_10000272 | 3300005985 | Bacteria | 118649 |
| 11 | Ga0081539_10005536 | 3300005985 | Bacteria | 12806 |
| 12 | Ga0081539_10016770 | 3300005985 | Bacteria | 5198 |
| 13 | Ga0105240_10001802 | 3300009093 | Bacteria | 36034 |
| 14 | Ga0105247_10002968 | 3300009101 | Bacteria | 11254 |
| 15 | Ga0105241_10004155 | 3300009174 | Bacteria | 10691 |
| 16 | Ga0105248_10007333 | 3300009177 | Bacteria | 12102 |
| 17 | Ga0105237_10006498 | 3300009545 | Bacteria | 12955 |
| 18 | Ga0157370_10159941 | 3300013104 | Bacteria | 2096 |
| 19 | Ga0157369_10103274 | 3300013105 | Bacteria | 3036 |
| 20 | Ga0163162_10189274 | 3300013306 | Bacteria | 2185 |
| 21 | Ga0157372_10262879 | 3300013307 | Bacteria | 2004 |
| 22 | Ga0157380_10049719 | 3300014326 | Bacteria | 3308 |
| 23 | Ga0157380_10071737 | 3300014326 | Bacteria | 2802 |
| 24 | Ga0157379_10000053 | 3300014968 | Bacteria | 72623 |
| 25 | Ga0163161_10102158 | 3300017792 | Bacteria | 2135 |
| 26 | Ga0209148_1000865 | 3300025254 | Bacteria | 21201 |
| 27 | Ga0207710_10000020 | 3300025900 | Bacteria | 338425 |
| 28 | Ga0207654_10000003 | 3300025911 | Bacteria | 1030378 |
| 29 | Ga0207711_10001282 | 3300025941 | Bacteria | 23831 |
| 30 | Ga0207658_10010403 | 3300025986 | Bacteria | 6319 |
| 31 | Ga0207703_10000006 | 3300026035 | Bacteria | 502351 |
| 32 | Ga0207702_10167628 | 3300026078 | Bacteria | 2011 |
| 33 | Ga0207698_10006922 | 3300026142 | Bacteria | 7096 |
| 34 | Ga0265340_10002006 | 3300031247 | Bacteria | 11645 |
| 35 | Ga0307513_10000392 | 3300031456 | Bacteria | 63905 |
| 36 | Ga0307408_100134990 | 3300031548 | Bacteria | 1930 |
| 37 | Ga0307508_10032993 | 3300031616 | Bacteria | 4675 |
| 38 | Ga0316579_10001073 | 3300031691 | Bacteria | 9668 |
| 39 | Ga0316579_10008764 | 3300031691 | Bacteria | 4230 |
| 40 | Ga0316576_10008701 | 3300031727 | Bacteria | 6497 |
| 41 | Ga0316578_10008028 | 3300031728 | Bacteria | 5338 |
| 42 | Ga0307405_10073220 | 3300031731 | Bacteria | 2211 |
| 43 | Ga0307410_10052918 | 3300031852 | Bacteria | 2745 |
| 44 | Ga0307407_10007055 | 3300031903 | Bacteria | 5058 |
| 45 | Ga0307409_100053446 | 3300031995 | Bacteria | 3103 |
| 46 | Ga0307409_100229091 | 3300031995 | Bacteria | 1683 |
| 47 | Ga0307415_100057243 | 3300032126 | Bacteria | 2678 |
| 48 | Ga0316583_10017364 | 3300032133 | Bacteria | 2589 |
| 49 | Ga0316574_0004775 | 3300035398 | Bacteria | 7161 |
| 50 | Ga0316574_0017738 | 3300035398 | Bacteria | 4172 |
| 51 | Ga0316582_0002584 | 3300036647 | Bacteria | 8578 |
| 52 | Ga0316582_0003537 | 3300036647 | Bacteria | 7680 |
| 53 | Ga0316584_0128771 | 3300036712 | Bacteria | 1890 |
| 54 | Ga0395899_0004848 | 3300037312 | Bacteria | 10478 |
| 55 | Ga0395900_0011167 | 3300037418 | Bacteria | 9182 |
| 56 | Ga0439436_0000048 | 3300041404 | Bacteria | 36210 |
| 57 | Ga0439439_0000115 | 3300041406 | Bacteria | 10994 |
| 58 | Ga0451795_0485458 | 3300041456 | Bacteria | 1429 |
| 59 | Ga0451853_0297251 | 3300041512 | Bacteria | 5530 |
| 60 | Ga0439433_0001638 | 3300041999 | Bacteria | 4662 |
| 61 | Ga0439457_000006 | 3300042014 | Bacteria | 47136 |
| 62 | Ga0450897_000237 | 3300042128 | Bacteria | 2815 |
| 63 | Ga0450894_005512 | 3300042131 | Bacteria | 1637 |
| 64 | Ga0495585_0005630 | 3300046492 | Bacteria | 7868 |
| 65 | Ga0495640_0008195 | 3300046533 | Bacteria | 8204 |
| 66 | Ga0495667_0059210 | 3300046559 | Bacteria | 2514 |
| 67 | Ga0495604_0003136 | 3300047317 | Bacteria | 13216 |
| 68 | Ga0495680_0107559 | 3300047322 | Bacteria | 2071 |
| 69 | Ga0496101_0099199 | 3300048904 | Bacteria | 2177 |
| 70 | Ga0496103_0060469 | 3300048906 | Bacteria | 2355 |
| 71 | Ga0496105_0011228 | 3300048908 | Bacteria | 7067 |
| 72 | Ga0496105_0171214 | 3300048908 | Bacteria | 1780 |
| 73 | Ga0496111_0027247 | 3300048914 | Bacteria | 4041 |
| 74 | Ga0496114_0043020 | 3300048917 | Bacteria | 3745 |
| 75 | Ga0496114_0142377 | 3300048917 | Bacteria | 2077 |
| 76 | Ga0496117_0104609 | 3300048920 | Bacteria | 1781 |
| 77 | Ga0496118_0044539 | 3300048921 | Bacteria | 3474 |
| 78 | Ga0496119_0007924 | 3300048922 | Bacteria | 9452 |
| 79 | Ga0496119_0043586 | 3300048922 | Bacteria | 2833 |
| 80 | Ga0496120_0000503 | 3300048923 | Bacteria | 61033 |
| 81 | Ga0496120_0009981 | 3300048923 | Bacteria | 6675 |
| 82 | Ga0496121_0008645 | 3300048924 | Bacteria | 11910 |
| 83 | Ga0496122_0001647 | 3300048925 | Bacteria | 34658 |
| 84 | Ga0496122_0009229 | 3300048925 | Bacteria | 10439 |
| 85 | Ga0496123_0000951 | 3300048926 | Bacteria | 45055 |
| 86 | Ga0496124_0001612 | 3300048927 | Bacteria | 32318 |
| 87 | Ga0496125_0000128 | 3300048928 | Bacteria | 163865 |
| 88 | Ga0496125_0000859 | 3300048928 | Bacteria | 48719 |
| 89 | Ga0496126_0021907 | 3300048929 | Bacteria | 6232 |
| 90 | Ga0496126_0056960 | 3300048929 | Bacteria | 3531 |
| 91 | Ga0501310_000045 | 3300049130 | Bacteria | 12690 |
| 92 | Ga0501031_0002470 | 3300049568 | Bacteria | 11790 |
| 93 | Ga0501032_0003095 | 3300049569 | Bacteria | 12824 |
| 94 | Ga0501032_0009070 | 3300049569 | Bacteria | 7224 |
| 95 | Ga0501032_0115929 | 3300049569 | Bacteria | 1771 |
| 96 | Ga0501033_0105705 | 3300049570 | Bacteria | 2051 |
| 97 | Ga0501036_0012110 | 3300049572 | Bacteria | 7148 |
| 98 | Ga0501037_0061986 | 3300049573 | Bacteria | 2727 |
| 99 | Ga0501038_0015148 | 3300049574 | Bacteria | 7015 |
| 100 | Ga0501038_0184962 | 3300049574 | Bacteria | 1679 |
| 101 | Ga0501043_0019308 | 3300049579 | Bacteria | 5350 |
| 102 | Ga0501043_0160871 | 3300049579 | Bacteria | 1754 |
| 103 | Ga0501046_0006705 | 3300049580 | Bacteria | 10169 |
| 104 | Ga0501047_0002248 | 3300049581 | Bacteria | 18480 |
| 105 | Ga0501047_0012311 | 3300049581 | Bacteria | 8096 |
| 106 | Ga0501067_0013007 | 3300049583 | Bacteria | 4608 |
| 107 | Ga0501070_0031450 | 3300049586 | Bacteria | 4447 |
| 108 | Ga0501035_0076623 | 3300049822 | Bacteria | 2957 |
| 109 | Ga0501035_0126845 | 3300049822 | Bacteria | 2227 |
| 110 | Ga0501035_0139847 | 3300049822 | Bacteria | 2105 |
| 111 | Ga0501044_0005395 | 3300049823 | Bacteria | 14201 |
| 112 | Ga0501044_0038626 | 3300049823 | Bacteria | 4985 |
| 113 | Ga0500651_0000211 | 3300053093 | Bacteria | 36797 |
| 114 | Ga0500568_0000079 | 3300053139 | Bacteria | 92754 |
| 115 | Ga0500573_0051596 | 3300053140 | Bacteria | 2365 |
| 116 | Ga0500616_0000406 | 3300053153 | Bacteria | 58774 |
| 117 | Ga0500616_0004528 | 3300053153 | Bacteria | 9859 |
| 118 | Ga0501082_0197795 | 3300060353 | Bacteria | 1749 |
| 119 | 2515494042 | 2515154088 | Bacteria | 5526283 |
| 120 | 2515721413 | 2515154129 | Bacteria | 5584369 |
| 121 | 2515755849 | 2515154137 | Bacteria | 5711575 |
| 122 | 2516085456 | 2515154202 | Bacteria | 5471270 |
| 123 | 2516089818 | 2515154203 | Bacteria | 5458536 |
| 124 | 2587863061 | 2585428094 | Bacteria | 3604039 |
| 125 | 2643851058 | 2643221567 | Bacteria | 4163945 |
| 126 | 2644082218 | 2643221613 | Bacteria | 4622396 |
| 127 | 2644134811 | 2643221624 | Bacteria | 4384879 |
| 128 | 2644277418 | 2643221649 | Bacteria | 3867359 |
| 129 | 2644503045 | 2643221690 | Bacteria | 4654705 |
| 130 | 2644525379 | 2643221694 | Bacteria | 4392972 |
| 131 | 2644664681 | 2643221721 | Bacteria | 4486924 |
| 132 | 2644669463 | 2643221722 | Bacteria | 4247614 |
| 133 | 2739602772 | 2739367653 | Bacteria | 2780952 |
| 134 | 2808873139 | 2808606365 | Bacteria | 4301966 |
| 135 | 2808901521 | 2808606372 | Bacteria | 4649509 |
| 136 | 2810364262 | 2808606700 | Bacteria | 3482157 |
| 137 | 2812364513 | 2811994880 | Bacteria | 4147780 |
| 138 | 2817508728 | 2816332305 | Bacteria | 2697803 |
| 139 | 2839986940 | 2839986021 | Bacteria | 3685650 |
| 140 | 2852678972 | 2852677369 | Bacteria | 3768884 |
| 141 | 2857481349 | 2857479173 | Bacteria | 2469263 |
| 142 | 2857634792 | 2857632687 | Bacteria | 2448521 |
| 143 | 2857727701 | 2857727296 | Bacteria | 2745552 |
| 144 | 2870802118 | 2870801768 | Bacteria | 2710986 |
| 145 | 2870806490 | 2870804320 | Bacteria | 2552467 |
| 146 | 2884996293 | 2884994152 | Bacteria | 4492978 |
| 147 | 2905927797 | 2905926851 | Bacteria | 4423176 |
| 148 | 2919449454 | 2919446982 | Bacteria | 3994487 |
| 149 | 2920882300 | 2920879853 | Bacteria | 4216831 |
| 150 | 2932432337 | 2932431166 | Bacteria | 4215299 |
| 151 | 2935894010 | 2935890801 | Bacteria | 4593001 |
| 152 | 2946005412 | 2946003308 | Bacteria | 3857229 |
| 153 | 2966925774 | 2966924647 | Bacteria | 3268643 |
| 154 | 2997604741 | 2997600082 | Bacteria | 9896405 |
| 155 | 3001890726 | 3001889506 | Bacteria | 2975194 |
| 156 | 3006325670 | 3006321560 | Bacteria | 8247479 |
| 157 | 8048129681 | 8048127548 | Bacteria | 11053136 |
| 158 | 8056065004 | 8056060235 | Bacteria | 7259403 |
| 159 | Ga0496111_0020591 | |||
| 160 | JGI24739J22299_10011678 | |||
| 161 | Ga0055527_1000012 | |||
| 162 | Ga0070658_10068393 | |||
| 163 | Ga0068869_100082372 | |||
| 164 | Ga0070667_100027900 | |||
| 165 | Ga0068852_100017452 | |||
| 166 | Ga0068858_100000003 | |||
| 167 | Ga0081540_1028348 | |||
| 168 | Ga0081539_10000272 | |||
| 169 | Ga0081539_10005536 | |||
| 170 | Ga0081539_10016770 | |||
| 171 | Ga0105240_10001802 | |||
| 172 | Ga0105247_10002968 | |||
| 173 | Ga0105241_10004155 | |||
| 174 | Ga0105248_10007333 | |||
| 175 | Ga0105237_10006498 | |||
| 176 | Ga0157370_10159941 | |||
| 177 | Ga0157369_10103274 | |||
| 178 | Ga0163162_10189274 | |||
| 179 | Ga0157372_10262879 | |||
| 180 | Ga0157380_10049719 | |||
| 181 | Ga0157380_10071737 | |||
| 182 | Ga0157379_10000053 | |||
| 183 | Ga0163161_10102158 | |||
| 184 | Ga0209148_1000865 | |||
| 185 | Ga0207710_10000020 | |||
| 186 | Ga0207654_10000003 | |||
| 187 | Ga0207711_10001282 | |||
| 188 | Ga0207658_10010403 | |||
| 189 | Ga0207703_10000006 | |||
| 190 | Ga0207702_10167628 | |||
| 191 | Ga0207698_10006922 | |||
| 192 | Ga0265340_10002006 | |||
| 193 | Ga0307513_10000392 | |||
| 194 | Ga0307408_100134990 | |||
| 195 | Ga0307508_10032993 | |||
| 196 | Ga0316579_10001073 | |||
| 197 | Ga0316579_10008764 | |||
| 198 | Ga0316576_10008701 | |||
| 199 | Ga0316578_10008028 | |||
| 200 | Ga0307405_10073220 | |||
| 201 | Ga0307410_10052918 | |||
| 202 | Ga0307407_10007055 | |||
| 203 | Ga0307409_100053446 | |||
| 204 | Ga0307409_100229091 | |||
| 205 | Ga0307415_100057243 | |||
| 206 | Ga0316583_10017364 | |||
| 207 | Ga0316574_0004775 | |||
| 208 | Ga0316574_0017738 | |||
| 209 | Ga0316582_0002584 | |||
| 210 | Ga0316582_0003537 | |||
| 211 | Ga0316584_0128771 | |||
| 212 | Ga0395899_0004848 | |||
| 213 | Ga0395900_0011167 | |||
| 214 | Ga0439436_0000048 | |||
| 215 | Ga0439439_0000115 | |||
| 216 | Ga0451795_0485458 | |||
| 217 | Ga0451853_0297251 | |||
| 218 | Ga0439433_0001638 | |||
| 219 | Ga0439457_000006 | |||
| 220 | Ga0450897_000237 | |||
| 221 | Ga0450894_005512 | |||
| 222 | Ga0495585_0005630 | |||
| 223 | Ga0495640_0008195 | |||
| 224 | Ga0495667_0059210 | |||
| 225 | Ga0495604_0003136 | |||
| 226 | Ga0495680_0107559 | |||
| 227 | Ga0496101_0099199 | |||
| 228 | Ga0496103_0060469 | |||
| 229 | Ga0496105_0011228 | |||
| 230 | Ga0496105_0171214 | |||
| 231 | Ga0496111_0027247 | |||
| 232 | Ga0496114_0043020 | |||
| 233 | Ga0496114_0142377 | |||
| 234 | Ga0496117_0104609 | |||
| 235 | Ga0496118_0044539 | |||
| 236 | Ga0496119_0007924 | |||
| 237 | Ga0496119_0043586 | |||
| 238 | Ga0496120_0000503 | |||
| 239 | Ga0496120_0009981 | |||
| 240 | Ga0496121_0008645 | |||
| 241 | Ga0496122_0001647 | |||
| 242 | Ga0496122_0009229 | |||
| 243 | Ga0496123_0000951 | |||
| 244 | Ga0496124_0001612 | |||
| 245 | Ga0496125_0000128 | |||
| 246 | Ga0496125_0000859 | |||
| 247 | Ga0496126_0021907 | |||
| 248 | Ga0496126_0056960 | |||
| 249 | Ga0501310_000045 | |||
| 250 | Ga0501031_0002470 | |||
| 251 | Ga0501032_0003095 | |||
| 252 | Ga0501032_0009070 | |||
| 253 | Ga0501032_0115929 | |||
| 254 | Ga0501033_0105705 | |||
| 255 | Ga0501036_0012110 | |||
| 256 | Ga0501037_0061986 | |||
| 257 | Ga0501038_0015148 | |||
| 258 | Ga0501038_0184962 | |||
| 259 | Ga0501043_0019308 | |||
| 260 | Ga0501043_0160871 | |||
| 261 | Ga0501046_0006705 | |||
| 262 | Ga0501047_0002248 | |||
| 263 | Ga0501047_0012311 | |||
| 264 | Ga0501067_0013007 | |||
| 265 | Ga0501070_0031450 | |||
| 266 | Ga0501035_0076623 | |||
| 267 | Ga0501035_0126845 | |||
| 268 | Ga0501035_0139847 | |||
| 269 | Ga0501044_0005395 | |||
| 270 | Ga0501044_0038626 | |||
| 271 | Ga0500651_0000211 | |||
| 272 | Ga0500568_0000079 | |||
| 273 | Ga0500573_0051596 | |||
| 274 | Ga0500616_0000406 | |||
| 275 | Ga0500616_0004528 | |||
| 276 | Ga0501082_0197795 | |||
| 277 | 2515494042 | |||
| 278 | 2515721413 | |||
| 279 | 2515755849 | |||
| 280 | 2516085456 | |||
| 281 | 2516089818 | |||
| 282 | 2587863061 | |||
| 283 | 2643851058 | |||
| 284 | 2644082218 | |||
| 285 | 2644134811 | |||
| 286 | 2644277418 | |||
| 287 | 2644503045 | |||
| 288 | 2644525379 | |||
| 289 | 2644664681 | |||
| 290 | 2644669463 | |||
| 291 | 2739602772 | |||
| 292 | 2808873139 | |||
| 293 | 2808901521 | |||
| 294 | 2810364262 | |||
| 295 | 2812364513 | |||
| 296 | 2817508728 | |||
| 297 | 2839986940 | |||
| 298 | 2852678972 | |||
| 299 | 2857481349 | |||
| 300 | 2857634792 | |||
| 301 | 2857727701 | |||
| 302 | 2870802118 | |||
| 303 | 2870806490 | |||
| 304 | 2884996293 | |||
| 305 | 2905927797 | |||
| 306 | 2919449454 | |||
| 307 | 2920882300 | |||
| 308 | 2932432337 | |||
| 309 | 2935894010 | |||
| 310 | 2946005412 | |||
| 311 | 2966925774 | |||
| 312 | 2997604741 | |||
| 313 | 3001890726 | |||
| 314 | 3006325670 | |||
| 315 | 8048129681 | |||
| 316 | 8056065004 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1jaw-assembly1.cif.gz_A | aminopeptidase p from e. coli low ph form | 0.8917 | 43 | 498 |
| 2bwt-assembly1.cif.gz_A | asp260ala escherichia coli aminopeptidase p | 0.888 | 37 | 498 |
| 2bh3-assembly1.cif.gz_A | zn substituted e. coli aminopeptidase p in complex with product | 0.8879 | 37 | 498 |
| 2bww-assembly1.cif.gz_A | his350ala escherichia coli aminopeptidase p | 0.887 | 37 | 498 |
| 2bwt-assembly1.cif.gz_A | asp260ala escherichia coli aminopeptidase p | 0.8861 | 37 | 498 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A1D6KDB2_217_431_3.90.230.10 | Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily | 0.9256 | 221 | 435 | 3.90.230.10 |
| 4pv4A02 | Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily | 0.9232 | 221 | 494 | 3.90.230.10 |
| af_I1NEY0_212_471_3.90.230.10 | Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily | 0.9219 | 221 | 494 | 3.90.230.10 |
| af_Q9NQH7_247_507_3.90.230.10 | Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily | 0.9199 | 222 | 495 | 3.90.230.10 |
| 3ig4F02 | Alpha Beta;Alpha-Beta Complex;Creatine Amidinohydrolase;Creatinase/methionine aminopeptidase superfamily | 0.9144 | 222 | 494 | 3.90.230.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A3B9W1E6-F1-model_v4 | Xaa-Pro aminopeptidase (EC 3.4.11.9) | 0.9922 | 230 | 497 |
GO:0004177
GO:0005829 GO:0006508 GO:0008237 GO:0046872 |
| AF-A0A359INA5-F1-model_v4 | deleted | 0.9904 | 351 | 483 |
|
| AF-A0A6B3HAF8-F1-model_v4 | Xaa-Pro aminopeptidase (EC 3.4.11.9) | 0.9896 | 221 | 378 |
GO:0004177
GO:0005829 GO:0006508 |
| AF-A0A519GK00-F1-model_v4 | Xaa-Pro aminopeptidase (EC 3.4.11.9) | 0.9894 | 214 | 496 |
GO:0004177
GO:0005829 GO:0006508 GO:0008237 GO:0046872 |
| AF-A0A6J7PP23-F1-model_v4 | Unannotated protein | 0.986 | 220 | 495 |
GO:0004177
GO:0005829 GO:0006508 GO:0008237 GO:0046872 |