F230006
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 158 | 117 | 151 | 322 |
Family's Representative Sequence
| Representative Sequence | 3300031251|Ga0265327_10000549|Ga0265327_100005492 |
| Length | 387 |
| Sequence | MRHPKRNQSDASQDECSGNILEYTHGGQSSDGTTGHSTKQSKNDCQMDGYILQAEDAVDTEIDCIASPAPLCLRTFKTPGEYAGMRLDQVLAKLLPEYSRARLQEWVTQDQVKVDGAAATVKQKVWGGENIEVMPQSNPAEQIHQAENIALDVMFEDDSILVINKPAGLVVHPGSGNWEGTLLNALLHHAPQLSEIPRAGIVHRLDKDTSGLLVVAKTITSQTALVRQLQARSVHREYFALAYGEVERSGIVDAPMGRHPTQRTKMAIVEDGKPAVTHYTVQERFPGCTLLRCKLETGRTHQIRVHLASIRHPLVGDSTYIKGAQKCALQLRALLESFPRQALHAAQLGLEHPESGEWMEWQAPLPEDMTRLLRCIREKIFSGTPTE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2511231003 | Herbaspirillum sp. CF444 | Isolate | Rhizosphere |
| 2 | 2721755523 | Delftia sp. HK171 | Isolate | Unclassified |
| 3 | 2839138175 | Delftia acidovorans B15 | Isolate | Rhizosphere |
| 4 | 2842718218 | Acidovorax sp. R-73343 | Isolate | Unclassified |
| 5 | 2857542790 | Achromobacter sp. R-72367 | Isolate | Unclassified |
| 6 | 2857576091 | Pigmentiphaga sp. R-72090 | Isolate | Unclassified |
| 7 | 3300002704 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB | Metagenome | Unclassified |
| 8 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 9 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 10 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 14 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 16 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 17 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 24 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 25 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 26 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 28 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 29 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 30 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 31 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 32 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 33 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 34 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 35 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 36 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 38 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 39 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 49 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 52 | 3300025206 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) | Metagenome | Unclassified |
| 53 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 54 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 55 | 3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 80 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 84 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 85 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 86 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 87 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 88 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 89 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 90 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 91 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 92 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 93 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 94 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 95 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 96 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 97 | 3300046501 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046665 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 104 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 105 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 106 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 107 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 108 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 109 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 110 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 113 | 3300049776 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought | Metagenome | Rhizosphere |
| 114 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 117 | 639633007 | Azoarcus olearius BH72 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.57 |
| Metatranscriptomes | 0 |
| Isolates | 4.43 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 2.53 |
| Nodule | 1.27 |
| Rhizoplane | 3.16 |
| Rhizosphere | 82.28 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 10.76 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25155J39150_1000513 | 3300002704 | Bacteria | 9230 |
| 2 | JGI25155J39150_1000858 | 3300002704 | Bacteria | 4449 |
| 3 | JGI25156J39149_1004173 | 3300002705 | Bacteria | 4478 |
| 4 | JGI25154J39366_1000326 | 3300002738 | Bacteria | 27616 |
| 5 | Ga0070658_10029116 | 3300005327 | Bacteria | 4436 |
| 6 | Ga0070658_10031499 | 3300005327 | Bacteria | 4259 |
| 7 | Ga0070676_10003185 | 3300005328 | Bacteria | 8505 |
| 8 | Ga0070683_100127154 | 3300005329 | Bacteria | 2409 |
| 9 | Ga0068869_100010666 | 3300005334 | Bacteria | 5997 |
| 10 | Ga0070666_10001481 | 3300005335 | Bacteria | 14260 |
| 11 | Ga0068868_100045431 | 3300005338 | Bacteria | 3436 |
| 12 | Ga0068868_100067945 | 3300005338 | Bacteria | 2837 |
| 13 | Ga0070689_100016314 | 3300005340 | Bacteria | 5435 |
| 14 | Ga0070661_100151363 | 3300005344 | Bacteria | 1754 |
| 15 | Ga0070669_100001889 | 3300005353 | Bacteria | 15109 |
| 16 | Ga0070673_100006894 | 3300005364 | Bacteria | 7431 |
| 17 | Ga0070714_100211076 | 3300005435 | Bacteria | 1779 |
| 18 | Ga0070708_100000218 | 3300005445 | Bacteria | 42697 |
| 19 | Ga0070678_100000443 | 3300005456 | Bacteria | 19607 |
| 20 | Ga0070681_10322635 | 3300005458 | Bacteria | 1454 |
| 21 | Ga0070679_100113651 | 3300005530 | Bacteria | 2693 |
| 22 | Ga0070684_100157500 | 3300005535 | Bacteria | 2059 |
| 23 | Ga0070665_100004030 | 3300005548 | Bacteria | 15466 |
| 24 | Ga0070665_100083446 | 3300005548 | Bacteria | 3200 |
| 25 | Ga0068855_100001244 | 3300005563 | Bacteria | 31623 |
| 26 | Ga0068852_100044429 | 3300005616 | Bacteria | 3773 |
| 27 | Ga0068864_100025807 | 3300005618 | Bacteria | 4952 |
| 28 | Ga0068866_10055392 | 3300005718 | Bacteria | 2036 |
| 29 | Ga0068851_10011114 | 3300005834 | Bacteria | 4216 |
| 30 | Ga0068858_100003984 | 3300005842 | Bacteria | 14574 |
| 31 | Ga0068858_100612510 | 3300005842 | Bacteria | 1057 |
| 32 | Ga0068862_100063105 | 3300005844 | Bacteria | 3188 |
| 33 | Ga0068862_100172151 | 3300005844 | Bacteria | 1939 |
| 34 | Ga0081539_10014013 | 3300005985 | Bacteria | 5973 |
| 35 | Ga0075366_10004503 | 3300006195 | Bacteria | 7477 |
| 36 | Ga0075366_10014082 | 3300006195 | Bacteria | 4563 |
| 37 | Ga0097621_100000222 | 3300006237 | Bacteria | 37946 |
| 38 | Ga0097621_100013496 | 3300006237 | Bacteria | 6090 |
| 39 | Ga0068871_100001148 | 3300006358 | Bacteria | 17759 |
| 40 | Ga0079104_1000002 | 3300006946 | Bacteria | 514469 |
| 41 | Ga0105250_10002008 | 3300009092 | Bacteria | 10541 |
| 42 | Ga0105240_10007958 | 3300009093 | Bacteria | 15290 |
| 43 | Ga0105240_10168149 | 3300009093 | Bacteria | 2599 |
| 44 | Ga0111539_10000674 | 3300009094 | Bacteria | 44151 |
| 45 | Ga0105243_10000194 | 3300009148 | Bacteria | 71277 |
| 46 | Ga0105238_10009747 | 3300009551 | Bacteria | 9619 |
| 47 | Ga0157374_10001722 | 3300013296 | Bacteria | 18362 |
| 48 | Ga0163162_10006452 | 3300013306 | Bacteria | 11363 |
| 49 | Ga0157375_10018462 | 3300013308 | Bacteria | 6326 |
| 50 | Ga0157380_10021077 | 3300014326 | Bacteria | 4883 |
| 51 | Ga0182008_10010663 | 3300014497 | Bacteria | 4914 |
| 52 | Ga0157379_10003104 | 3300014968 | Bacteria | 14052 |
| 53 | Ga0163161_10021657 | 3300017792 | Bacteria | 4518 |
| 54 | Ga0163161_10311430 | 3300017792 | Bacteria | 1242 |
| 55 | Ga0213876_10038010 | 3300021384 | Bacteria | 2539 |
| 56 | Ga0209435_100442 | 3300025206 | Bacteria | 8419 |
| 57 | Ga0209646_1000073 | 3300025246 | Bacteria | 224301 |
| 58 | Ga0209759_1000064 | 3300025256 | Bacteria | 193120 |
| 59 | Ga0207697_10014348 | 3300025315 | Bacteria | 3286 |
| 60 | Ga0207656_10019563 | 3300025321 | Bacteria | 2679 |
| 61 | Ga0207705_10007583 | 3300025909 | Bacteria | 7975 |
| 62 | Ga0207705_10115841 | 3300025909 | Bacteria | 1984 |
| 63 | Ga0207707_10363018 | 3300025912 | Bacteria | 1247 |
| 64 | Ga0207695_10022341 | 3300025913 | Bacteria | 7184 |
| 65 | Ga0207695_10025809 | 3300025913 | Bacteria | 6568 |
| 66 | Ga0207662_10079102 | 3300025918 | Bacteria | 2002 |
| 67 | Ga0207652_10182701 | 3300025921 | Bacteria | 1885 |
| 68 | Ga0207694_10163196 | 3300025924 | Bacteria | 1801 |
| 69 | Ga0207650_10128747 | 3300025925 | Bacteria | 1979 |
| 70 | Ga0207659_10053557 | 3300025926 | Bacteria | 2878 |
| 71 | Ga0207644_10008150 | 3300025931 | Bacteria | 6865 |
| 72 | Ga0207709_10000015 | 3300025935 | Bacteria | 493221 |
| 73 | Ga0207704_10019625 | 3300025938 | Bacteria | 3554 |
| 74 | Ga0207691_10000316 | 3300025940 | Bacteria | 48235 |
| 75 | Ga0207691_10019912 | 3300025940 | Bacteria | 6347 |
| 76 | Ga0207689_10020154 | 3300025942 | Bacteria | 5617 |
| 77 | Ga0207661_10165770 | 3300025944 | Bacteria | 1920 |
| 78 | Ga0207667_10001234 | 3300025949 | Bacteria | 32069 |
| 79 | Ga0207651_10017102 | 3300025960 | Bacteria | 4273 |
| 80 | Ga0207658_10029555 | 3300025986 | Bacteria | 3871 |
| 81 | Ga0207658_10063093 | 3300025986 | Bacteria | 2776 |
| 82 | Ga0207677_10021862 | 3300026023 | Bacteria | 3919 |
| 83 | Ga0207677_10080066 | 3300026023 | Bacteria | 2339 |
| 84 | Ga0207703_10004214 | 3300026035 | Bacteria | 11854 |
| 85 | Ga0207703_10040397 | 3300026035 | Bacteria | 3733 |
| 86 | Ga0207648_10001366 | 3300026089 | Bacteria | 26971 |
| 87 | Ga0207683_10106238 | 3300026121 | Bacteria | 2510 |
| 88 | Ga0207683_10322750 | 3300026121 | Bacteria | 1415 |
| 89 | Ga0207698_10020149 | 3300026142 | Bacteria | 4585 |
| 90 | Ga0209281_1000007 | 3300027111 | Bacteria | 938265 |
| 91 | Ga0268266_10012509 | 3300028379 | Bacteria | 7335 |
| 92 | Ga0268265_10020564 | 3300028380 | Bacteria | 4608 |
| 93 | Ga0268264_10019162 | 3300028381 | Bacteria | 5592 |
| 94 | Ga0268264_10060018 | 3300028381 | Bacteria | 3188 |
| 95 | Ga0265324_10000006 | 3300029957 | Bacteria | 267048 |
| 96 | Ga0265325_10000639 | 3300031241 | Bacteria | 25487 |
| 97 | Ga0265331_10005427 | 3300031250 | Bacteria | 7697 |
| 98 | Ga0265331_10012429 | 3300031250 | Bacteria | 4612 |
| 99 | Ga0265331_10061096 | 3300031250 | Bacteria | 1779 |
| 100 | Ga0265327_10000549 | 3300031251 | Bacteria | 64188 |
| 101 | Ga0265327_10024351 | 3300031251 | Bacteria | 3560 |
| 102 | Ga0265327_10025790 | 3300031251 | Bacteria | 3418 |
| 103 | Ga0265327_10058550 | 3300031251 | Bacteria | 1977 |
| 104 | Ga0265314_10018253 | 3300031711 | Bacteria | 5475 |
| 105 | Ga0307410_10194965 | 3300031852 | Bacteria | 1543 |
| 106 | Ga0307416_100060230 | 3300032002 | Bacteria | 3090 |
| 107 | Ga0307414_10254866 | 3300032004 | Bacteria | 1461 |
| 108 | Ga0373925_0092989 | 3300037068 | Bacteria | 2308 |
| 109 | Ga0436365_0678804 | 3300039437 | Bacteria | 7212 |
| 110 | Ga0451577_0001268 | 3300042876 | Bacteria | 34860 |
| 111 | Ga0451577_0085049 | 3300042876 | Bacteria | 2822 |
| 112 | Ga0451577_0223616 | 3300042876 | Bacteria | 1702 |
| 113 | Ga0451577_0534888 | 3300042876 | Bacteria | 1064 |
| 114 | Ga0453683_0000049 | 3300044673 | Bacteria | 206697 |
| 115 | Ga0453684_0000005 | 3300044712 | Bacteria | 1431632 |
| 116 | Ga0453684_0000069 | 3300044712 | Bacteria | 456439 |
| 117 | Ga0453684_0000286 | 3300044712 | Bacteria | 218034 |
| 118 | Ga0453684_0001128 | 3300044712 | Bacteria | 83666 |
| 119 | Ga0453684_0050977 | 3300044712 | Bacteria | 5434 |
| 120 | Ga0453684_0235690 | 3300044712 | Bacteria | 2110 |
| 121 | Ga0453684_0716359 | 3300044712 | Bacteria | 1086 |
| 122 | Ga0451576_0000102 | 3300045051 | Bacteria | 218034 |
| 123 | Ga0451576_0001867 | 3300045051 | Bacteria | 34008 |
| 124 | Ga0451576_0004621 | 3300045051 | Bacteria | 17769 |
| 125 | Ga0451576_0006890 | 3300045051 | Bacteria | 13760 |
| 126 | Ga0451576_0143969 | 3300045051 | Bacteria | 2485 |
| 127 | Ga0451576_0317464 | 3300045051 | Bacteria | 1630 |
| 128 | Ga0451576_0460907 | 3300045051 | Bacteria | 1335 |
| 129 | Ga0495607_0000021 | 3300046501 | Bacteria | 164571 |
| 130 | Ga0495643_0007711 | 3300046522 | Bacteria | 6896 |
| 131 | Ga0495597_0011622 | 3300046542 | Bacteria | 4264 |
| 132 | Ga0495668_0152096 | 3300046616 | Bacteria | 1267 |
| 133 | Ga0495661_0005879 | 3300046665 | Bacteria | 8672 |
| 134 | Ga0495687_009406 | 3300047443 | Bacteria | 5465 |
| 135 | Ga0496102_0026597 | 3300048905 | Bacteria | 5163 |
| 136 | Ga0496110_0002611 | 3300048913 | Bacteria | 13559 |
| 137 | Ga0496111_0015395 | 3300048914 | Bacteria | 5248 |
| 138 | Ga0496111_0086796 | 3300048914 | Bacteria | 2290 |
| 139 | Ga0496114_0013604 | 3300048917 | Bacteria | 6526 |
| 140 | Ga0496121_0042936 | 3300048924 | Bacteria | 3923 |
| 141 | Ga0496122_0046273 | 3300048925 | Bacteria | 3372 |
| 142 | Ga0496124_0000046 | 3300048927 | Bacteria | 287043 |
| 143 | Ga0501032_0034891 | 3300049569 | Bacteria | 3440 |
| 144 | Ga0501032_0072999 | 3300049569 | Bacteria | 2286 |
| 145 | Ga0501036_0021594 | 3300049572 | Bacteria | 5412 |
| 146 | Ga0501038_0016214 | 3300049574 | Bacteria | 6757 |
| 147 | Ga0501280_000568 | 3300049776 | Bacteria | 8605 |
| 148 | Ga0501035_0000699 | 3300049822 | Bacteria | 36573 |
| 149 | Ga0501044_0066713 | 3300049823 | Bacteria | 3668 |
| 150 | nmdc:mga0k408_16995_c1 | 3300050493 | Bacteria | 4044 |
| 151 | nmdc:mga0k408_18522_c1 | 3300050493 | Bacteria | 3887 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005834 | Ga0068851_10011114 | Ga0068851_100111144 | 287 |
| 2 | 3300006237 | Ga0097621_100013496 | Ga0097621_1000134963 | 287 |
| 3 | 3300009093 | Ga0105240_10168149 | Ga0105240_101681493 | 287 |
| 4 | 3300021384 | Ga0213876_10038010 | Ga0213876_100380102 | 287 |
| 5 | 3300025321 | Ga0207656_10019563 | Ga0207656_100195633 | 287 |
| 6 | 3300025909 | Ga0207705_10115841 | Ga0207705_101158412 | 287 |
| 7 | 3300025913 | Ga0207695_10022341 | Ga0207695_100223415 | 287 |
| 8 | 3300026142 | Ga0207698_10020149 | Ga0207698_100201493 | 287 |
| 9 | 3300037068 | Ga0373925_0092989 | Ga0373925_0092989_1101_1964 | 287 |
| 10 | 3300048913 | Ga0496110_0002611 | Ga0496110_0002611_1992_2855 | 287 |
| 11 | 3300048914 | Ga0496111_0086796 | Ga0496111_0086796_618_1481 | 287 |
| 12 | 3300005329 | Ga0070683_100127154 | Ga0070683_1001271542 | 288 |
| 13 | 3300005344 | Ga0070661_100151363 | Ga0070661_1001513632 | 288 |
| 14 | 3300005458 | Ga0070681_10322635 | Ga0070681_103226352 | 288 |
| 15 | 3300005535 | Ga0070684_100157500 | Ga0070684_1001575002 | 288 |
| 16 | 3300025912 | Ga0207707_10363018 | Ga0207707_103630182 | 288 |
| 17 | 3300025924 | Ga0207694_10163196 | Ga0207694_101631962 | 288 |
| 18 | 3300025944 | Ga0207661_10165770 | Ga0207661_101657702 | 288 |
| 19 | 3300013306 | Ga0163162_10006452 | Ga0163162_100064528 | 289 |
| 20 | 3300013308 | Ga0157375_10018462 | Ga0157375_100184623 | 289 |
| 21 | 3300014968 | Ga0157379_10003104 | Ga0157379_1000310410 | 289 |
| 22 | 3300032002 | Ga0307416_100060230 | Ga0307416_1000602303 | 293 |
| 23 | 3300009094 | Ga0111539_10000674 | Ga0111539_1000067427 | 294 |
| 24 | 3300005435 | Ga0070714_100211076 | Ga0070714_1002110761 | 296 |
| 25 | 3300005563 | Ga0068855_100001244 | Ga0068855_10000124421 | 296 |
| 26 | 3300025913 | Ga0207695_10025809 | Ga0207695_100258093 | 296 |
| 27 | 3300025949 | Ga0207667_10001234 | Ga0207667_100012343 | 296 |
| 28 | 3300039437 | Ga0436365_0678804 | Ga0436365_0678804_793_1683 | 296 |
| 29 | 3300045051 | Ga0451576_0460907 | Ga0451576_0460907_126_1094 | 298 |
| 30 | 3300005338 | Ga0068868_100067945 | Ga0068868_1000679453 | 299 |
| 31 | 3300005340 | Ga0070689_100016314 | Ga0070689_1000163144 | 299 |
| 32 | 3300005842 | Ga0068858_100612510 | Ga0068858_1006125101 | 299 |
| 33 | 3300005844 | Ga0068862_100063105 | Ga0068862_1000631052 | 299 |
| 34 | 3300025918 | Ga0207662_10079102 | Ga0207662_100791021 | 299 |
| 35 | 3300025926 | Ga0207659_10053557 | Ga0207659_100535573 | 299 |
| 36 | 3300025940 | Ga0207691_10019912 | Ga0207691_100199124 | 299 |
| 37 | 3300025986 | Ga0207658_10063093 | Ga0207658_100630931 | 299 |
| 38 | 3300026023 | Ga0207677_10080066 | Ga0207677_100800662 | 299 |
| 39 | 3300026035 | Ga0207703_10040397 | Ga0207703_100403972 | 299 |
| 40 | 3300026121 | Ga0207683_10106238 | Ga0207683_101062382 | 299 |
| 41 | 3300028380 | Ga0268265_10020564 | Ga0268265_100205644 | 299 |
| 42 | 3300028381 | Ga0268264_10060018 | Ga0268264_100600182 | 299 |
| 43 | 3300049572 | Ga0501036_0021594 | Ga0501036_0021594_1392_2348 | 299 |
| 44 | 3300026121 | Ga0207683_10322750 | Ga0207683_103227502 | 300 |
| 45 | 3300031852 | Ga0307410_10194965 | Ga0307410_101949652 | 300 |
| 46 | 3300032004 | Ga0307414_10254866 | Ga0307414_102548662 | 300 |
| 47 | 3300005327 | Ga0070658_10029116 | Ga0070658_100291163 | 302 |
| 48 | 3300005530 | Ga0070679_100113651 | Ga0070679_1001136512 | 302 |
| 49 | 3300025909 | Ga0207705_10007583 | Ga0207705_100075837 | 302 |
| 50 | 3300025921 | Ga0207652_10182701 | Ga0207652_101827012 | 302 |
| 51 | 3300049823 | Ga0501044_0066713 | Ga0501044_0066713_1229_2200 | 305 |
| 52 | iso_pu_bacteria | 639633007 | 639786141 | 305 |
| 53 | 3300005548 | Ga0070665_100083446 | Ga0070665_1000834462 | 306 |
| 54 | 3300006195 | Ga0075366_10014082 | Ga0075366_100140823 | 306 |
| 55 | 3300014326 | Ga0157380_10021077 | Ga0157380_100210772 | 306 |
| 56 | 3300042876 | Ga0451577_0534888 | Ga0451577_0534888_43_1035 | 306 |
| 57 | 3300006195 | Ga0075366_10004503 | Ga0075366_100045035 | 307 |
| 58 | 3300009551 | Ga0105238_10009747 | Ga0105238_100097472 | 307 |
| 59 | 3300042876 | Ga0451577_0001268 | Ga0451577_0001268_4616_5572 | 307 |
| 60 | 3300044712 | Ga0453684_0000005 | Ga0453684_0000005_700389_701345 | 307 |
| 61 | 3300044712 | Ga0453684_0001128 | Ga0453684_0001128_56791_57747 | 307 |
| 62 | 3300050493 | nmdc:mga0k408_18522_c1 | nmdc:mga0k408_18522_c1_1649_2599 | 307 |
| 63 | 3300017792 | Ga0163161_10311430 | Ga0163161_103114301 | 308 |
| 64 | 3300042876 | Ga0451577_0223616 | Ga0451577_0223616_608_1564 | 308 |
| 65 | 3300044712 | Ga0453684_0716359 | Ga0453684_0716359_68_1027 | 308 |
| 66 | 3300048925 | Ga0496122_0046273 | Ga0496122_0046273_2379_3344 | 308 |
| 67 | 3300048927 | Ga0496124_0000046 | Ga0496124_0000046_139902_140867 | 308 |
| 68 | iso_pu_bacteria | 2857542790 | 2857546654 | 308 |
| 69 | 3300005328 | Ga0070676_10003185 | Ga0070676_100031854 | 309 |
| 70 | 3300005334 | Ga0068869_100010666 | Ga0068869_1000106663 | 309 |
| 71 | 3300005335 | Ga0070666_10001481 | Ga0070666_100014814 | 309 |
| 72 | 3300005338 | Ga0068868_100045431 | Ga0068868_1000454313 | 309 |
| 73 | 3300005353 | Ga0070669_100001889 | Ga0070669_1000018894 | 309 |
| 74 | 3300005364 | Ga0070673_100006894 | Ga0070673_1000068942 | 309 |
| 75 | 3300005445 | Ga0070708_100000218 | Ga0070708_10000021833 | 309 |
| 76 | 3300005456 | Ga0070678_100000443 | Ga0070678_1000004434 | 309 |
| 77 | 3300005548 | Ga0070665_100004030 | Ga0070665_10000403012 | 309 |
| 78 | 3300005618 | Ga0068864_100025807 | Ga0068864_1000258074 | 309 |
| 79 | 3300005718 | Ga0068866_10055392 | Ga0068866_100553922 | 309 |
| 80 | 3300005842 | Ga0068858_100003984 | Ga0068858_10000398411 | 309 |
| 81 | 3300005844 | Ga0068862_100172151 | Ga0068862_1001721512 | 309 |
| 82 | 3300006237 | Ga0097621_100000222 | Ga0097621_10000022222 | 309 |
| 83 | 3300006358 | Ga0068871_100001148 | Ga0068871_10000114813 | 309 |
| 84 | 3300013296 | Ga0157374_10001722 | Ga0157374_100017223 | 309 |
| 85 | 3300017792 | Ga0163161_10021657 | Ga0163161_100216573 | 309 |
| 86 | 3300025315 | Ga0207697_10014348 | Ga0207697_100143483 | 309 |
| 87 | 3300025925 | Ga0207650_10128747 | Ga0207650_101287472 | 309 |
| 88 | 3300025931 | Ga0207644_10008150 | Ga0207644_100081503 | 309 |
| 89 | 3300025938 | Ga0207704_10019625 | Ga0207704_100196253 | 309 |
| 90 | 3300025940 | Ga0207691_10000316 | Ga0207691_1000031630 | 309 |
| 91 | 3300025942 | Ga0207689_10020154 | Ga0207689_100201544 | 309 |
| 92 | 3300025960 | Ga0207651_10017102 | Ga0207651_100171024 | 309 |
| 93 | 3300025986 | Ga0207658_10029555 | Ga0207658_100295552 | 309 |
| 94 | 3300026023 | Ga0207677_10021862 | Ga0207677_100218622 | 309 |
| 95 | 3300026035 | Ga0207703_10004214 | Ga0207703_100042147 | 309 |
| 96 | 3300026089 | Ga0207648_10001366 | Ga0207648_1000136611 | 309 |
| 97 | 3300028379 | Ga0268266_10012509 | Ga0268266_100125094 | 309 |
| 98 | 3300028381 | Ga0268264_10019162 | Ga0268264_100191623 | 309 |
| 99 | 3300044712 | Ga0453684_0000069 | Ga0453684_0000069_29880_30845 | 309 |
| 100 | 3300045051 | Ga0451576_0001867 | Ga0451576_0001867_22154_23119 | 309 |
| 101 | 3300045051 | Ga0451576_0317464 | Ga0451576_0317464_383_1426 | 309 |
| 102 | 3300049776 | Ga0501280_000568 | Ga0501280_000568_4869_5849 | 311 |
| 103 | 3300031251 | Ga0265327_10058550 | Ga0265327_100585502 | 313 |
| 104 | 3300044673 | Ga0453683_0000049 | Ga0453683_0000049_169826_170821 | 313 |
| 105 | 3300044712 | Ga0453684_0000286 | Ga0453684_0000286_47214_48209 | 313 |
| 106 | 3300045051 | Ga0451576_0000102 | Ga0451576_0000102_169826_170821 | 313 |
| 107 | 3300049569 | Ga0501032_0034891 | Ga0501032_0034891_156_1181 | 314 |
| 108 | 3300049574 | Ga0501038_0016214 | Ga0501038_0016214_1369_2394 | 314 |
| 109 | 3300050493 | nmdc:mga0k408_16995_c1 | nmdc:mga0k408_16995_c1_2195_3172 | 314 |
| 110 | 3300005327 | Ga0070658_10031499 | Ga0070658_100314993 | 315 |
| 111 | 3300045051 | Ga0451576_0004621 | Ga0451576_0004621_4626_5705 | 315 |
| 112 | 3300031251 | Ga0265327_10025790 | Ga0265327_100257903 | 317 |
| 113 | 3300005985 | Ga0081539_10014013 | Ga0081539_100140132 | 318 |
| 114 | 3300031250 | Ga0265331_10005427 | Ga0265331_100054273 | 318 |
| 115 | 3300031250 | Ga0265331_10061096 | Ga0265331_100610963 | 318 |
| 116 | 3300031251 | Ga0265327_10000549 | Ga0265327_100005492 | 318 |
| 117 | 3300031251 | Ga0265327_10024351 | Ga0265327_100243514 | 318 |
| 118 | 3300044712 | Ga0453684_0050977 | Ga0453684_0050977_176_1243 | 318 |
| 119 | 3300044712 | Ga0453684_0235690 | Ga0453684_0235690_391_1458 | 318 |
| 120 | 3300045051 | Ga0451576_0143969 | Ga0451576_0143969_1244_2311 | 318 |
| 121 | 3300049569 | Ga0501032_0072999 | Ga0501032_0072999_1239_2270 | 318 |
| 122 | 3300049822 | Ga0501035_0000699 | Ga0501035_0000699_32605_33645 | 318 |
| 123 | iso_pu_bacteria | 2842718218 | 2842721255 | 318 |
| 124 | iso_pu_bacteria | 2857576091 | 2857576769 | 318 |
| 125 | 3300031250 | Ga0265331_10012429 | Ga0265331_100124295 | 319 |
| 126 | 3300045051 | Ga0451576_0006890 | Ga0451576_0006890_5179_6249 | 319 |
| 127 | 3300046542 | Ga0495597_0011622 | Ga0495597_0011622_1194_2213 | 320 |
| 128 | 3300042876 | Ga0451577_0085049 | Ga0451577_0085049_1214_2263 | 322 |
| 129 | 3300046501 | Ga0495607_0000021 | Ga0495607_0000021_133854_134879 | 322 |
| 130 | 3300029957 | Ga0265324_10000006 | Ga0265324_1000000693 | 326 |
| 131 | 3300031241 | Ga0265325_10000639 | Ga0265325_100006399 | 326 |
| 132 | 3300031711 | Ga0265314_10018253 | Ga0265314_100182535 | 326 |
| 133 | iso_pu_bacteria | 2721755523 | 2722882465 | 327 |
| 134 | iso_pu_bacteria | 2839138175 | 2839141280 | 327 |
| 135 | 3300046522 | Ga0495643_0007711 | Ga0495643_0007711_187_1233 | 328 |
| 136 | 3300046616 | Ga0495668_0152096 | Ga0495668_0152096_133_1179 | 328 |
| 137 | 3300046665 | Ga0495661_0005879 | Ga0495661_0005879_7440_8486 | 328 |
| 138 | 3300047443 | Ga0495687_009406 | Ga0495687_009406_3092_4132 | 328 |
| 139 | 3300048905 | Ga0496102_0026597 | Ga0496102_0026597_3244_4284 | 328 |
| 140 | 3300048914 | Ga0496111_0015395 | Ga0496111_0015395_922_1962 | 328 |
| 141 | 3300048917 | Ga0496114_0013604 | Ga0496114_0013604_2488_3528 | 328 |
| 142 | 3300006946 | Ga0079104_1000002 | Ga0079104_100000279 | 331 |
| 143 | 3300009092 | Ga0105250_10002008 | Ga0105250_100020085 | 331 |
| 144 | 3300009148 | Ga0105243_10000194 | Ga0105243_1000019428 | 331 |
| 145 | 3300025935 | Ga0207709_10000015 | Ga0207709_1000001577 | 331 |
| 146 | 3300027111 | Ga0209281_1000007 | Ga0209281_1000007297 | 331 |
| 147 | iso_pu_bacteria | 2511231003 | 2511248056 | 337 |
| 148 | 3300002704 | JGI25155J39150_1000513 | JGI25155J39150_100051310 | 341 |
| 149 | 3300002704 | JGI25155J39150_1000858 | JGI25155J39150_10008581 | 341 |
| 150 | 3300002705 | JGI25156J39149_1004173 | JGI25156J39149_10041731 | 341 |
| 151 | 3300002738 | JGI25154J39366_1000326 | JGI25154J39366_10003261 | 341 |
| 152 | 3300005616 | Ga0068852_100044429 | Ga0068852_1000444294 | 341 |
| 153 | 3300009093 | Ga0105240_10007958 | Ga0105240_1000795812 | 341 |
| 154 | 3300014497 | Ga0182008_10010663 | Ga0182008_100106634 | 341 |
| 155 | 3300025206 | Ga0209435_100442 | Ga0209435_1004422 | 341 |
| 156 | 3300025246 | Ga0209646_1000073 | Ga0209646_1000073194 | 341 |
| 157 | 3300025256 | Ga0209759_1000064 | Ga0209759_1000064165 | 341 |
| 158 | 3300048924 | Ga0496121_0042936 | Ga0496121_0042936_2767_3825 | 341 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1v9f-assembly1.cif.gz_A | crystal structure of catalytic domain of pseudouridine synthase rlud from escherichia coli | 0.8885 | 100 | 339 |
| 1prz-assembly1.cif.gz_A | crystal structure of pseudouridine synthase rlud catalytic module | 0.8792 | 99 | 341 |
| 2i82-assembly2.cif.gz_B | crystal structure of pseudouridine synthase rlua: indirect sequence readout through protein-induced rna structure | 0.8767 | 103 | 317 |
| 1xpi-assembly2.cif.gz_B | crystal structure of the catalytic domain of e. coli pseudouridine synthase rluc | 0.8595 | 109 | 330 |
| 2i82-assembly2.cif.gz_B | crystal structure of pseudouridine synthase rlua: indirect sequence readout through protein-induced rna structure | 0.8574 | 103 | 317 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q2FZ78_3_70_3.10.290.10 | Alpha Beta;Roll;Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A;RNA-binding S4 domain | 0.9534 | 30 | 93 | 3.10.290.10 |
| af_Q2FZ78_82_304_3.30.2350.10 | Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase | 0.9448 | 108 | 330 | 3.30.2350.10 |
| 1v9fA01 | Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase | 0.942 | 107 | 317 | 3.30.2350.10 |
| 1v9fA01 | Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase | 0.9372 | 107 | 317 | 3.30.2350.10 |
| af_I1JSZ4_76_138_3.10.290.10 | Alpha Beta;Roll;Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A;RNA-binding S4 domain | 0.9339 | 40 | 94 | 3.10.290.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A0F9UZH7-F1-model_v4 | Pseudouridine synthase RsuA/RluA-like domain-containing protein | 0.9629 | 105 | 330 |
GO:0000455
GO:0003723 GO:0009982 |
| AF-A0A0G0PPM9-F1-model_v4 | Pseudouridine synthase (EC 5.4.99.-) | 0.9546 | 106 | 328 |
GO:0000455
GO:0003723 GO:0009982 GO:0140098 |
| AF-A0A848Q9A2-F1-model_v4 | deleted | 0.9462 | 97 | 330 |
|
| AF-A0A1B2M1V5-F1-model_v4 | RNA pseudouridine synthase | 0.9443 | 108 | 319 |
GO:0000455
GO:0003723 GO:0009982 GO:0140098 |
| AF-A0A0G0UJI2-F1-model_v4 | Pseudouridine synthase (EC 5.4.99.-) | 0.9422 | 103 | 330 |
GO:0000455
GO:0003723 GO:0009982 GO:0140098 |
Predicted Structure (AlphaFold2)
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