F229728

General Info

Members Datasets Scaffolds Average Seq Length
158 112 316 306

Family's Representative Sequence

Representative Sequence 3300014326|Ga0157380_10000318|Ga0157380_100003185
Length 333
Sequence MHATGQAAAMRNKFPRSNEQQNVGRQSNRGLSDMSSAIHIGVDFGGTKIEAAALDTHGNFLARLRAPNPGTYDAAIREVHDLVTAVESQVGVRCSIGIGTPGSISPRTGVMRNANSTYLNGRRFREDLIAALGRDVRIANDANCLALSEVLDGAAVGSSVTFAVILGTGCGGGLVVNGQLVEGANGVGGEWGHTPLPWPEPDEIGTAHCWCGQHGCLEMWVSGTGLQRDYALTSGEQLDGPAIIRAARGSNPQARAAFDRYVNRLGRGLAVIVNILDPDTFVLGGGMSNVEELYERLPAVMRSHVFSDAWDAQIVRAKWGDSSGVRGAARLWR

Samples

Sample ID Description Type Environment
1 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
12 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
13 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
14 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
15 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
16 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
17 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
18 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
19 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
20 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
21 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
22 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
23 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
24 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
25 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
26 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
27 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
45 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
46 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
47 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
48 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
49 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
50 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
51 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
52 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
53 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
54 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
55 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
56 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
57 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
58 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
59 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
60 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
61 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
62 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
63 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
64 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
65 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
66 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
67 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
68 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
69 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
70 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
71 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
72 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
73 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
74 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
75 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
76 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
77 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
78 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
79 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
80 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
81 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
82 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
83 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
86 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
87 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
88 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
89 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
90 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
91 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
92 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
93 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
94 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
95 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
96 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
97 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
98 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
99 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
100 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
101 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
102 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
103 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
104 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
105 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
106 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
107 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
108 2849560528 Caulobacter zeae 410 Isolate Unclassified
109 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
110 2851153111 Caulobacter radicis 736 Isolate Unclassified
111 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
112 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.41
Metatranscriptomes 0
Isolates 7.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.72
Nodule 0
Rhizoplane 0.63
Rhizosphere 62.66
Stem 0
Stem Tuber 0
Unclassified 1.27

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157380_10000318 3300014326 Bacteria 29048
2 rootH1_10214052 3300003323 Bacteria 2553
3 Ga0055530_10001510 3300003791 Bacteria 16838
4 Ga0065704_10102365 3300005289 Bacteria 2208
5 Ga0065707_10081844 3300005295 Bacteria 34337
6 Ga0070666_10023264 3300005335 Bacteria 4033
7 Ga0070667_100365834 3300005367 Bacteria 1308
8 Ga0070709_10034079 3300005434 Bacteria 3084
9 Ga0070679_100015885 3300005530 Bacteria 7247
10 Ga0070665_100009841 3300005548 Bacteria 9663
11 Ga0068861_100013966 3300005719 Bacteria 5630
12 Ga0068858_100396399 3300005842 Bacteria 1326
13 Ga0068860_100203708 3300005843 Bacteria 1918
14 Ga0105241_10094245 3300009174 Unclassified 2368
15 Ga0105248_10005506 3300009177 Bacteria 13905
16 Ga0105237_10009630 3300009545 Bacteria 10342
17 Ga0105238_10173912 3300009551 Bacteria 2130
18 Ga0105249_10005148 3300009553 Bacteria 11285
19 Ga0099796_10013146 3300010159 Bacteria 2357
20 Ga0105239_10029061 3300010375 Bacteria 6077
21 Ga0157371_10329266 3300013102 Unclassified 1109
22 Ga0157369_10197270 3300013105 Bacteria 2113
23 Ga0157379_10141785 3300014968 Bacteria 2166
24 Ga0213872_10000015 3300021361 Bacteria 180923
25 Ga0213872_10000730 3300021361 Bacteria 24554
26 Ga0213872_10004650 3300021361 Bacteria 7228
27 Ga0213872_10011138 3300021361 Bacteria 4261
28 Ga0213872_10018914 3300021361 Bacteria 3174
29 Ga0213872_10061507 3300021361 Bacteria 1698
30 Ga0213875_10000053 3300021388 Bacteria 141791
31 Ga0213875_10010752 3300021388 Bacteria 4577
32 Ga0209676_1000908 3300025292 Bacteria 37192
33 Ga0209050_1000935 3300025298 Bacteria 38200
34 Ga0209257_1014889 3300025304 Bacteria 3292
35 Ga0207680_10062931 3300025903 Bacteria 2269
36 Ga0207647_10003134 3300025904 Bacteria 12419
37 Ga0207654_10098076 3300025911 Bacteria 1800
38 Ga0207695_10000138 3300025913 Bacteria 217045
39 Ga0207671_10026335 3300025914 Bacteria 4360
40 Ga0207652_10065248 3300025921 Bacteria 3152
41 Ga0207711_10039726 3300025941 Bacteria 4002
42 Ga0207712_10021919 3300025961 Bacteria 4199
43 Ga0207658_10277060 3300025986 Bacteria 1436
44 Ga0207641_10043016 3300026088 Bacteria 3791
45 Ga0207675_100004658 3300026118 Bacteria 13212
46 Ga0207675_100044946 3300026118 Bacteria 4126
47 Ga0268266_10012323 3300028379 Bacteria 7395
48 Ga0268264_10388791 3300028381 Bacteria 1338
49 Ga0307515_10006740 3300028794 Bacteria 22865
50 Ga0307515_10017692 3300028794 Bacteria 12962
51 Ga0307515_10023777 3300028794 Bacteria 10717
52 Ga0307515_10034407 3300028794 Bacteria 8296
53 Ga0307515_10075987 3300028794 Bacteria 4465
54 Ga0307515_10102157 3300028794 Bacteria 3452
55 Ga0265338_10001183 3300028800 Bacteria 43061
56 Ga0316576_10257282 3300031727 Bacteria 1310
57 Ga0316578_10018919 3300031728 Plasmid 3783
58 Ga0316574_0003415 3300035398 Bacteria 8182
59 Ga0316584_0278656 3300036712 Bacteria 1215
60 Ga0395899_0000004 3300037312 Bacteria 874267
61 Ga0436364_0153639 3300037853 Bacteria 3651
62 Ga0436364_0644625 3300037853 Bacteria 28470
63 Ga0436364_0722076 3300037853 Bacteria 8194
64 Ga0400483_260290 3300039062 Bacteria 14163
65 Ga0436365_0439703 3300039437 Bacteria 1203
66 Ga0436365_1658810 3300039437 Bacteria 1318
67 Ga0436360_1260179 3300039438 Bacteria 1042
68 Ga0436361_0103428 3300039447 Bacteria 6025
69 Ga0436361_0403204 3300039447 Bacteria 5996
70 Ga0436361_0447485 3300039447 Bacteria 4055
71 Ga0436361_0495351 3300039447 Bacteria 1268
72 Ga0436361_0579210 3300039447 Bacteria 42493
73 Ga0436361_0743631 3300039447 Bacteria 4419
74 Ga0436361_0785248 3300039447 Bacteria 2107
75 Ga0436361_1070757 3300039447 Bacteria 27556
76 Ga0436361_1151571 3300039447 Bacteria 3756
77 Ga0466971_0128769 3300044719 Bacteria 1174
78 Ga0466970_0056747 3300044765 Bacteria 2093
79 Ga0466957_0002020 3300044842 Bacteria 10811
80 Ga0466958_0008500 3300045836 Bacteria 5701
81 Ga0495627_001835 3300046453 Bacteria 11293
82 Ga0495638_0000137 3300046460 Bacteria 116065
83 Ga0495638_0000771 3300046460 Bacteria 34027
84 Ga0495638_0004244 3300046460 Bacteria 10906
85 Ga0495638_0009530 3300046460 Bacteria 6807
86 Ga0495650_0000045 3300046471 Bacteria 346204
87 Ga0495650_0016883 3300046471 Bacteria 3676
88 Ga0495650_0036233 3300046471 Bacteria 2161
89 Ga0495610_0003547 3300046512 Bacteria 12082
90 Ga0495616_0087574 3300046513 Bacteria 1479
91 Ga0495631_0021346 3300046518 Bacteria 3016
92 Ga0495632_0014821 3300046519 Bacteria 4396
93 Ga0495637_0062548 3300046520 Bacteria 1523
94 Ga0495648_0026244 3300046524 Bacteria 3925
95 Ga0495648_0094060 3300046524 Bacteria 1670
96 Ga0495654_0000010 3300046530 Bacteria 378481
97 Ga0495609_0012224 3300046538 Bacteria 4072
98 Ga0495621_0002858 3300046539 Bacteria 4701
99 Ga0495668_0004855 3300046616 Bacteria 9344
100 Ga0495668_0011941 3300046616 Bacteria 5173
101 Ga0495625_0000162 3300046660 Bacteria 103961
102 Ga0495625_0005966 3300046660 Bacteria 10951
103 Ga0495625_0023990 3300046660 Bacteria 4650
104 Ga0495625_0045340 3300046660 Bacteria 3178
105 Ga0495589_0013097 3300046794 Bacteria 4283
106 Ga0495673_0000039 3300047469 Bacteria 301943
107 Ga0495673_0000115 3300047469 Bacteria 154414
108 Ga0495686_0000617 3300047472 Bacteria 49100
109 Ga0495686_0001459 3300047472 Bacteria 25765
110 Ga0496115_0000169 3300048918 Bacteria 60622
111 Ga0496117_0226904 3300048920 Bacteria 1035
112 Ga0496118_0236104 3300048921 Bacteria 1050
113 Ga0496121_0035409 3300048924 Bacteria 4476
114 Ga0496122_0045037 3300048925 Bacteria 3434
115 Ga0496123_0024085 3300048926 Bacteria 4637
116 Ga0496124_0008963 3300048927 Bacteria 10356
117 Ga0496124_0025287 3300048927 Bacteria 5380
118 Ga0495678_000685 3300049459 Bacteria 31121
119 Ga0501043_0043626 3300049579 Bacteria 3525
120 Ga0501035_0204343 3300049822 Bacteria 1693
121 Ga0501044_0219209 3300049823 Bacteria 1854
122 Ga0501044_0467481 3300049823 Bacteria 1166
123 Ga0500578_0000005 3300053086 Bacteria 243789
124 Ga0500578_0000385 3300053086 Bacteria 54183
125 Ga0500643_010662 3300053087 Bacteria 3404
126 Ga0500643_028314 3300053087 Bacteria 1735
127 Ga0500644_0001166 3300053088 Bacteria 7607
128 Ga0500583_0058594 3300053092 Bacteria 1811
129 Ga0500641_0065959 3300053096 Bacteria 1515
130 Ga0500556_0000414 3300053104 Bacteria 30953
131 Ga0500556_0024024 3300053104 Bacteria 1998
132 Ga0500562_003915 3300053108 Bacteria 3753
133 Ga0500562_005333 3300053108 Bacteria 3227
134 Ga0500594_0000041 3300053118 Bacteria 42069
135 Ga0500594_0001120 3300053118 Bacteria 5757
136 Ga0500608_000004 3300053122 Bacteria 108109
137 Ga0500617_028372 3300053124 Bacteria 2493
138 Ga0500642_0000001 3300053130 Bacteria 1468402
139 Ga0500559_0013760 3300053136 Bacteria 3422
140 Ga0500588_0003444 3300053146 Bacteria 3339
141 Ga0500588_0005179 3300053146 Bacteria 2877
142 Ga0500622_0000153 3300053156 Bacteria 72168
143 Ga0500622_0006457 3300053156 Bacteria 6788
144 Ga0500622_0021824 3300053156 Bacteria 3397
145 Ga0500627_0076600 3300053158 Bacteria 1487
146 Ga0500645_002950 3300053730 Bacteria 7224
147 2511124347 2510917020 Bacteria 5657507
148 2524613563 2524023250 Bacteria 5457705
149 2585147967 2582581279 Bacteria 4980720
150 2739790714 2739367756 Bacteria 4553612
151 2792461946 2791355048 Bacteria 5832535
152 2843747534 2843744320 Bacteria 5659202
153 2843748808 2843744320 Bacteria 5659202
154 2849562174 2849560528 Bacteria 5393480
155 2849576204 2849573788 Bacteria 5421256
156 2851156612 2851153111 Bacteria 5542585
157 2857507819 2857504554 Bacteria 5369913
158 2941486770 2941485952 Bacteria 3591484
159 Ga0157380_10000318
160 rootH1_10214052
161 Ga0055530_10001510
162 Ga0065704_10102365
163 Ga0065707_10081844
164 Ga0070666_10023264
165 Ga0070667_100365834
166 Ga0070709_10034079
167 Ga0070679_100015885
168 Ga0070665_100009841
169 Ga0068861_100013966
170 Ga0068858_100396399
171 Ga0068860_100203708
172 Ga0105241_10094245
173 Ga0105248_10005506
174 Ga0105237_10009630
175 Ga0105238_10173912
176 Ga0105249_10005148
177 Ga0099796_10013146
178 Ga0105239_10029061
179 Ga0157371_10329266
180 Ga0157369_10197270
181 Ga0157379_10141785
182 Ga0213872_10000015
183 Ga0213872_10000730
184 Ga0213872_10004650
185 Ga0213872_10011138
186 Ga0213872_10018914
187 Ga0213872_10061507
188 Ga0213875_10000053
189 Ga0213875_10010752
190 Ga0209676_1000908
191 Ga0209050_1000935
192 Ga0209257_1014889
193 Ga0207680_10062931
194 Ga0207647_10003134
195 Ga0207654_10098076
196 Ga0207695_10000138
197 Ga0207671_10026335
198 Ga0207652_10065248
199 Ga0207711_10039726
200 Ga0207712_10021919
201 Ga0207658_10277060
202 Ga0207641_10043016
203 Ga0207675_100004658
204 Ga0207675_100044946
205 Ga0268266_10012323
206 Ga0268264_10388791
207 Ga0307515_10006740
208 Ga0307515_10017692
209 Ga0307515_10023777
210 Ga0307515_10034407
211 Ga0307515_10075987
212 Ga0307515_10102157
213 Ga0265338_10001183
214 Ga0316576_10257282
215 Ga0316578_10018919
216 Ga0316574_0003415
217 Ga0316584_0278656
218 Ga0395899_0000004
219 Ga0436364_0153639
220 Ga0436364_0644625
221 Ga0436364_0722076
222 Ga0400483_260290
223 Ga0436365_0439703
224 Ga0436365_1658810
225 Ga0436360_1260179
226 Ga0436361_0103428
227 Ga0436361_0403204
228 Ga0436361_0447485
229 Ga0436361_0495351
230 Ga0436361_0579210
231 Ga0436361_0743631
232 Ga0436361_0785248
233 Ga0436361_1070757
234 Ga0436361_1151571
235 Ga0466971_0128769
236 Ga0466970_0056747
237 Ga0466957_0002020
238 Ga0466958_0008500
239 Ga0495627_001835
240 Ga0495638_0000137
241 Ga0495638_0000771
242 Ga0495638_0004244
243 Ga0495638_0009530
244 Ga0495650_0000045
245 Ga0495650_0016883
246 Ga0495650_0036233
247 Ga0495610_0003547
248 Ga0495616_0087574
249 Ga0495631_0021346
250 Ga0495632_0014821
251 Ga0495637_0062548
252 Ga0495648_0026244
253 Ga0495648_0094060
254 Ga0495654_0000010
255 Ga0495609_0012224
256 Ga0495621_0002858
257 Ga0495668_0004855
258 Ga0495668_0011941
259 Ga0495625_0000162
260 Ga0495625_0005966
261 Ga0495625_0023990
262 Ga0495625_0045340
263 Ga0495589_0013097
264 Ga0495673_0000039
265 Ga0495673_0000115
266 Ga0495686_0000617
267 Ga0495686_0001459
268 Ga0496115_0000169
269 Ga0496117_0226904
270 Ga0496118_0236104
271 Ga0496121_0035409
272 Ga0496122_0045037
273 Ga0496123_0024085
274 Ga0496124_0008963
275 Ga0496124_0025287
276 Ga0495678_000685
277 Ga0501043_0043626
278 Ga0501035_0204343
279 Ga0501044_0219209
280 Ga0501044_0467481
281 Ga0500578_0000005
282 Ga0500578_0000385
283 Ga0500643_010662
284 Ga0500643_028314
285 Ga0500644_0001166
286 Ga0500583_0058594
287 Ga0500641_0065959
288 Ga0500556_0000414
289 Ga0500556_0024024
290 Ga0500562_003915
291 Ga0500562_005333
292 Ga0500594_0000041
293 Ga0500594_0001120
294 Ga0500608_000004
295 Ga0500617_028372
296 Ga0500642_0000001
297 Ga0500559_0013760
298 Ga0500588_0003444
299 Ga0500588_0005179
300 Ga0500622_0000153
301 Ga0500622_0006457
302 Ga0500622_0021824
303 Ga0500627_0076600
304 Ga0500645_002950
305 2511124347
306 2524613563
307 2585147967
308 2739790714
309 2792461946
310 2843747534
311 2843748808
312 2849562174
313 2849576204
314 2851156612
315 2857507819
316 2941486770

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00480

ROK

ROK family

39

333

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7p9l-assembly1.cif.gz_BBB n-acetylglucosamine kinase from plesiomonas shigelloides compexed with alpha-n-acetylglucosamine-6-phosphate 0.9442 4 300
7p9l-assembly1.cif.gz_BBB n-acetylglucosamine kinase from plesiomonas shigelloides compexed with alpha-n-acetylglucosamine-6-phosphate 0.9204 4 300
3vov-assembly1.cif.gz_B crystal structure of rok hexokinase from thermus thermophilus 0.8848 6 298
2aa4-assembly1.cif.gz_B crystal structure of escherichia coli putative n-acetylmannosamine kinase, new york structural genomics consortium 0.8846 6 300
3vov-assembly1.cif.gz_C crystal structure of rok hexokinase from thermus thermophilus 0.8831 6 298
ID Description Score Start End Superfamily
af_P23917_104_294_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9837 109 295 3.30.420.40
af_P23917_1_103_1.10.520.10 Mainly Alpha;Orthogonal Bundle;Peroxidase; domain 1; 0.9821 9 108 1.10.520.10
af_P23917_121_283_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9807 126 284 3.30.420.40
af_P23917_104_294_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9584 109 295 3.30.420.40
af_P23917_121_283_3.30.420.40 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9512 126 284 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A418H6M2-F1-model_v4 deleted 0.9817 121 304
AF-A0A1H9JG10-F1-model_v4 Fructokinase 0.969 1 302 GO:0004396
AF-A0A0U1HI58-F1-model_v4 deleted 0.9627 144 300
AF-A0A379WDQ8-F1-model_v4 Fructokinase (EC 2.7.1.4) 0.9613 9 141 GO:0005524
GO:0008865
GO:0046872
AF-A0A1H9JG10-F1-model_v4 Fructokinase 0.9596 1 302 GO:0004396

Map