F229533

General Info

Members Datasets Scaffolds Average Seq Length
158 113 316 347

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10160004|Ga0111539_101600042
Length 369
Sequence MTVGLRSDIHLGVSGEPAVALRIVQWTTGNVGRRSVRAIANNPALELVGCYAWSPDKVGRDVGELCGVAPVGVRATNDVGALLSLSPDCVVYNPMWPNTDEVVRILESGVNVVSTAAFINGKCNAADRERITAACQRGGVSMFGTGISPGLIELVGITVAGLCDRIDKFTIDESSDTTLYDSPATELPCGFGRPIDDPELAGMAARGTAVFGEAVAMVADALGVELDDIVCQAEYAKAIEDVVMESWTIPAGHVAGVYASWQGRVGDRTVVELNVRWRKGRKLDPDWAIREGHVIRVDGRPTVVTTLQYLPPPDFHATTFAEFMVLGMIMTAMPAVNAIPYVVAAPPGIVTYTDIALPLPRGWARGAHA

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
8 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
9 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
10 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
11 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
12 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
13 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
16 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
20 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
21 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
22 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
23 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
24 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
25 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
33 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
34 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
35 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
36 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
37 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
38 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
39 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
40 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
41 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
42 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
43 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
44 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
45 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
46 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
47 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
48 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
49 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
50 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
51 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
52 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
53 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
54 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
55 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
56 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
57 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
58 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
59 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
60 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
61 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
62 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
63 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
64 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
65 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
66 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
67 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
68 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
69 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
70 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
71 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
74 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
81 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
82 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
83 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
84 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
85 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
86 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
87 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
88 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
89 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
90 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
91 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
92 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
95 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
96 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
97 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
98 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
99 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
100 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
101 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
102 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
103 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
104 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
105 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
106 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
107 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
108 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
109 2671180195 Frankia sp. CcI49 Isolate Nodule
110 2687453737 Frankia sp. BMG5.36 Isolate Nodule
111 2773857922 Frankia sp. CcI49 Isolate Nodule
112 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
113 8002784119 Frankia sp. AgB1.9 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 96.84
Metatranscriptomes 0
Isolates 3.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.33
Nodule 2.53
Rhizoplane 10.76
Rhizosphere 78.48
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10160004 3300009094 Bacteria 2634
2 JGI25407J50210_10000831 3300003373 Bacteria 6617
3 Ga0065715_10135324 3300005293 Bacteria 1940
4 Ga0070673_100253713 3300005364 Bacteria 1534
5 Ga0070708_100012480 3300005445 Bacteria 6935
6 Ga0070678_100052604 3300005456 Bacteria 2958
7 Ga0070678_100317141 3300005456 Bacteria 1330
8 Ga0070685_10156213 3300005466 Bacteria 1450
9 Ga0070704_100140834 3300005549 Bacteria 1883
10 Ga0068859_100472609 3300005617 Bacteria 1349
11 Ga0068863_100205194 3300005841 Bacteria 1897
12 Ga0068862_100196393 3300005844 Bacteria 1818
13 Ga0081455_10001130 3300005937 Bacteria 33386
14 Ga0081455_10057436 3300005937 Bacteria 3298
15 Ga0081538_10001336 3300005981 Bacteria 25371
16 Ga0081538_10029513 3300005981 Bacteria 3745
17 Ga0075363_100042834 3300006048 Bacteria 2393
18 Ga0075428_100018812 3300006844 Bacteria 7637
19 Ga0075428_100020155 3300006844 Bacteria 7386
20 Ga0075428_100044084 3300006844 Bacteria 4903
21 Ga0075428_100097855 3300006844 Bacteria 3199
22 Ga0075430_100112661 3300006846 Bacteria 2268
23 Ga0075431_100026788 3300006847 Bacteria 5913
24 Ga0075431_100129491 3300006847 Bacteria 2604
25 Ga0097620_100472627 3300006931 Bacteria 1349
26 Ga0111539_10001841 3300009094 Bacteria 28209
27 Ga0105242_10050627 3300009176 Bacteria 3382
28 Ga0105248_10031749 3300009177 Bacteria 5901
29 Ga0105249_10169821 3300009553 Bacteria 2114
30 Ga0163162_10386546 3300013306 Bacteria 1532
31 Ga0157375_10291296 3300013308 Bacteria 1796
32 Ga0157375_10367792 3300013308 Bacteria 1604
33 Ga0157375_10479359 3300013308 Bacteria 1409
34 Ga0213873_10001132 3300021358 Bacteria 4361
35 Ga0207706_10273715 3300025933 Bacteria 1473
36 Ga0207686_10018444 3300025934 Bacteria 3951
37 Ga0207711_10017815 3300025941 Bacteria 5901
38 Ga0207651_10252042 3300025960 Bacteria 1445
39 Ga0207651_10285117 3300025960 Bacteria 1367
40 Ga0207658_10184638 3300025986 Bacteria 1729
41 Ga0207641_10482741 3300026088 Bacteria 1201
42 Ga0207683_10078634 3300026121 Bacteria 2923
43 Ga0265334_10013127 3300028573 Bacteria 3473
44 Ga0265338_10000221 3300028800 Bacteria 105982
45 Ga0265325_10001081 3300031241 Bacteria 19617
46 Ga0265339_10006225 3300031249 Bacteria 7857
47 Ga0307513_10273290 3300031456 Bacteria 1472
48 Ga0265313_10001264 3300031595 Bacteria 24038
49 Ga0373953_0016981 3300035117 Bacteria 2668
50 Ga0373956_0082268 3300035119 Bacteria 1478
51 Ga0436365_1524447 3300039437 Bacteria 9175
52 Ga0436363_1507830 3300039450 Bacteria 2734
53 Ga0439460_0003361 3300042461 Bacteria 3874
54 Ga0439440_0016108 3300042993 Bacteria 1631
55 Ga0466963_0048350 3300044694 Bacteria 2810
56 Ga0466957_0144899 3300044842 Bacteria 1533
57 Ga0466967_0068729 3300045976 Bacteria 3164
58 Ga0466967_0466611 3300045976 Bacteria 1235
59 Ga0495651_0128522 3300046462 Bacteria 1853
60 Ga0495608_0005147 3300046511 Bacteria 9345
61 Ga0495630_0140634 3300046517 Bacteria 1835
62 Ga0495586_0024251 3300046535 Bacteria 3241
63 Ga0495667_0056983 3300046559 Bacteria 2569
64 Ga0495634_0008400 3300046642 Bacteria 7695
65 Ga0495658_0146631 3300046683 Bacteria 1447
66 Ga0495613_0000311 3300046689 Bacteria 44152
67 Ga0495613_0175725 3300046689 Bacteria 1518
68 Ga0495604_0184869 3300047317 Bacteria 1456
69 Ga0495680_0100299 3300047322 Bacteria 2158
70 Ga0495686_0002741 3300047472 Bacteria 16101
71 Ga0496100_0006932 3300048903 Bacteria 6211
72 Ga0496101_0023588 3300048904 Bacteria 4252
73 Ga0496101_0035316 3300048904 Bacteria 3535
74 Ga0496102_0034672 3300048905 Bacteria 4540
75 Ga0496104_0000946 3300048907 Bacteria 24980
76 Ga0496104_0002201 3300048907 Bacteria 16866
77 Ga0496105_0023585 3300048908 Bacteria 4992
78 Ga0496107_0003264 3300048910 Bacteria 10807
79 Ga0496107_0060897 3300048910 Bacteria 2732
80 Ga0496109_0279423 3300048912 Bacteria 1574
81 Ga0496110_0169323 3300048913 Bacteria 1982
82 Ga0496111_0144219 3300048914 Bacteria 1765
83 Ga0496112_0000758 3300048915 Bacteria 22643
84 Ga0496114_0000231 3300048917 Bacteria 40742
85 Ga0496114_0110466 3300048917 Bacteria 2355
86 Ga0496115_0000317 3300048918 Bacteria 41021
87 Ga0496115_0004057 3300048918 Bacteria 10572
88 Ga0501033_0001885 3300049570 Bacteria 18251
89 Ga0501033_0020446 3300049570 Bacteria 5001
90 Ga0501034_0000806 3300049571 Bacteria 46584
91 Ga0501034_0180606 3300049571 Bacteria 2075
92 Ga0501037_0064346 3300049573 Bacteria 2673
93 Ga0501039_0054029 3300049575 Bacteria 3109
94 Ga0501040_0009576 3300049576 Bacteria 6320
95 Ga0501040_0066994 3300049576 Bacteria 2474
96 Ga0501041_0002863 3300049577 Bacteria 9875
97 Ga0501042_0051527 3300049578 Bacteria 2936
98 Ga0501043_0070875 3300049579 Bacteria 2738
99 Ga0501046_0089221 3300049580 Bacteria 2373
100 Ga0501047_0177676 3300049581 Bacteria 1996
101 Ga0501068_0000859 3300049584 Bacteria 15816
102 Ga0501068_0011747 3300049584 Bacteria 4951
103 Ga0501068_0166484 3300049584 Bacteria 1390
104 Ga0501069_0005177 3300049585 Bacteria 6776
105 Ga0501069_0015360 3300049585 Bacteria 4103
106 Ga0501070_0001062 3300049586 Bacteria 24734
107 Ga0501070_0019078 3300049586 Bacteria 5753
108 Ga0501070_0090859 3300049586 Bacteria 2527
109 Ga0501071_0086362 3300049587 Bacteria 2301
110 Ga0501072_0037032 3300049588 Bacteria 3826
111 Ga0501072_0067537 3300049588 Bacteria 2821
112 Ga0501072_0069993 3300049588 Bacteria 2770
113 Ga0501073_0000790 3300049589 Bacteria 22536
114 Ga0501074_0021443 3300049590 Bacteria 4690
115 Ga0501074_0196031 3300049590 Bacteria 1440
116 Ga0501075_0018135 3300049591 Bacteria 5090
117 Ga0501077_0001979 3300049593 Bacteria 12382
118 Ga0501079_0007987 3300049741 Bacteria 8019
119 Ga0501079_0012256 3300049741 Bacteria 6543
120 Ga0501079_0255319 3300049741 Bacteria 1370
121 Ga0501080_0010168 3300049742 Bacteria 8603
122 Ga0501080_0138833 3300049742 Bacteria 2248
123 Ga0501080_0229632 3300049742 Bacteria 1696
124 Ga0501080_0357823 3300049742 Bacteria 1317
125 Ga0501083_0007339 3300049744 Bacteria 7819
126 Ga0501083_0007874 3300049744 Bacteria 7548
127 Ga0501035_0087189 3300049822 Bacteria 2751
128 Ga0501044_0001424 3300049823 Bacteria 28064
129 Ga0501045_0010094 3300049824 Bacteria 6607
130 Ga0501045_0199692 3300049824 Bacteria 1490
131 nmdc:mga0yw44_151047_c1 3300050492 Bacteria 1515
132 nmdc:mga05p37_382746_c1 3300050507 Bacteria 1648
133 nmdc:mga0qj67_103625_c1 3300050509 Bacteria 2295
134 nmdc:mga06r32_165778_c1 3300050510 Bacteria 2192
135 nmdc:mga06r32_22973_c1 3300050510 Bacteria 5769
136 nmdc:mga06r32_25227_c1 3300050510 Bacteria 5528
137 nmdc:mga08y16_24545_c1 3300050511 Bacteria 5605
138 Ga0495595_0099151 3300053084 Bacteria 1405
139 Ga0500654_083872 3300053099 Bacteria 1466
140 Ga0500652_000173 3300053131 Bacteria 24995
141 Ga0500568_0000023 3300053139 Bacteria 176763
142 Ga0500604_0006634 3300053151 Bacteria 3061
143 Ga0500616_0001688 3300053153 Bacteria 20330
144 Ga0500616_0011026 3300053153 Bacteria 5377
145 Ga0500616_0011391 3300053153 Bacteria 5255
146 Ga0500616_0012601 3300053153 Bacteria 4946
147 Ga0501084_0000240 3300054114 Bacteria 41460
148 Ga0501084_0005034 3300054114 Bacteria 10813
149 Ga0501084_0076990 3300054114 Bacteria 2796
150 Ga0501082_0002776 3300060353 Bacteria 15293
151 Ga0501082_0073019 3300060353 Bacteria 2955
152 Ga0530510_0002528 3300061734 Bacteria 12566
153 Ga0530510_0056351 3300061734 Bacteria 2839
154 2671833944 2671180195 Bacteria 9757215
155 2689956425 2687453737 Bacteria 11203906
156 2774852100 2773857922 Bacteria 9757215
157 2939586469 2939582691 Bacteria 7088898
158 8002786506 8002784119 Bacteria 9788632
159 Ga0111539_10160004
160 JGI25407J50210_10000831
161 Ga0065715_10135324
162 Ga0070673_100253713
163 Ga0070708_100012480
164 Ga0070678_100052604
165 Ga0070678_100317141
166 Ga0070685_10156213
167 Ga0070704_100140834
168 Ga0068859_100472609
169 Ga0068863_100205194
170 Ga0068862_100196393
171 Ga0081455_10001130
172 Ga0081455_10057436
173 Ga0081538_10001336
174 Ga0081538_10029513
175 Ga0075363_100042834
176 Ga0075428_100018812
177 Ga0075428_100020155
178 Ga0075428_100044084
179 Ga0075428_100097855
180 Ga0075430_100112661
181 Ga0075431_100026788
182 Ga0075431_100129491
183 Ga0097620_100472627
184 Ga0111539_10001841
185 Ga0105242_10050627
186 Ga0105248_10031749
187 Ga0105249_10169821
188 Ga0163162_10386546
189 Ga0157375_10291296
190 Ga0157375_10367792
191 Ga0157375_10479359
192 Ga0213873_10001132
193 Ga0207706_10273715
194 Ga0207686_10018444
195 Ga0207711_10017815
196 Ga0207651_10252042
197 Ga0207651_10285117
198 Ga0207658_10184638
199 Ga0207641_10482741
200 Ga0207683_10078634
201 Ga0265334_10013127
202 Ga0265338_10000221
203 Ga0265325_10001081
204 Ga0265339_10006225
205 Ga0307513_10273290
206 Ga0265313_10001264
207 Ga0373953_0016981
208 Ga0373956_0082268
209 Ga0436365_1524447
210 Ga0436363_1507830
211 Ga0439460_0003361
212 Ga0439440_0016108
213 Ga0466963_0048350
214 Ga0466957_0144899
215 Ga0466967_0068729
216 Ga0466967_0466611
217 Ga0495651_0128522
218 Ga0495608_0005147
219 Ga0495630_0140634
220 Ga0495586_0024251
221 Ga0495667_0056983
222 Ga0495634_0008400
223 Ga0495658_0146631
224 Ga0495613_0000311
225 Ga0495613_0175725
226 Ga0495604_0184869
227 Ga0495680_0100299
228 Ga0495686_0002741
229 Ga0496100_0006932
230 Ga0496101_0023588
231 Ga0496101_0035316
232 Ga0496102_0034672
233 Ga0496104_0000946
234 Ga0496104_0002201
235 Ga0496105_0023585
236 Ga0496107_0003264
237 Ga0496107_0060897
238 Ga0496109_0279423
239 Ga0496110_0169323
240 Ga0496111_0144219
241 Ga0496112_0000758
242 Ga0496114_0000231
243 Ga0496114_0110466
244 Ga0496115_0000317
245 Ga0496115_0004057
246 Ga0501033_0001885
247 Ga0501033_0020446
248 Ga0501034_0000806
249 Ga0501034_0180606
250 Ga0501037_0064346
251 Ga0501039_0054029
252 Ga0501040_0009576
253 Ga0501040_0066994
254 Ga0501041_0002863
255 Ga0501042_0051527
256 Ga0501043_0070875
257 Ga0501046_0089221
258 Ga0501047_0177676
259 Ga0501068_0000859
260 Ga0501068_0011747
261 Ga0501068_0166484
262 Ga0501069_0005177
263 Ga0501069_0015360
264 Ga0501070_0001062
265 Ga0501070_0019078
266 Ga0501070_0090859
267 Ga0501071_0086362
268 Ga0501072_0037032
269 Ga0501072_0067537
270 Ga0501072_0069993
271 Ga0501073_0000790
272 Ga0501074_0021443
273 Ga0501074_0196031
274 Ga0501075_0018135
275 Ga0501077_0001979
276 Ga0501079_0007987
277 Ga0501079_0012256
278 Ga0501079_0255319
279 Ga0501080_0010168
280 Ga0501080_0138833
281 Ga0501080_0229632
282 Ga0501080_0357823
283 Ga0501083_0007339
284 Ga0501083_0007874
285 Ga0501035_0087189
286 Ga0501044_0001424
287 Ga0501045_0010094
288 Ga0501045_0199692
289 nmdc:mga0yw44_151047_c1
290 nmdc:mga05p37_382746_c1
291 nmdc:mga0qj67_103625_c1
292 nmdc:mga06r32_165778_c1
293 nmdc:mga06r32_22973_c1
294 nmdc:mga06r32_25227_c1
295 nmdc:mga08y16_24545_c1
296 Ga0495595_0099151
297 Ga0500654_083872
298 Ga0500652_000173
299 Ga0500568_0000023
300 Ga0500604_0006634
301 Ga0500616_0001688
302 Ga0500616_0011026
303 Ga0500616_0011391
304 Ga0500616_0012601
305 Ga0501084_0000240
306 Ga0501084_0005034
307 Ga0501084_0076990
308 Ga0501082_0002776
309 Ga0501082_0073019
310 Ga0530510_0002528
311 Ga0530510_0056351
312 2671833944
313 2689956425
314 2774852100
315 2939586469
316 8002786506

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19328

DAP_DH_C

2,4-diaminopentanoate dehydrogenase C-terminal domain

153

367

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
6g1h-assembly1.cif.gz_A-2 amine dehydrogenase from petrotoga mobilis; open form 0.8319 2 341
7xdu-assembly1.cif.gz_A ttheramdh-nad+ 0.8207 2 341
7qzl-assembly1.cif.gz_A amine dehydrogenase from cystobacter fuscus (cfusamdh) w145a mutant with nadp+ and pentylamine 0.8185 2 335
6iau-assembly1.cif.gz_B amine dehydrogenase from cystobacter fuscus in complex with nadp+ and cyclohexylamine 0.8131 2 347
6iaq-assembly2.cif.gz_B structure of amine dehydrogenase from mycobacterium smegmatis 0.8068 1 338
ID Description Score Start End Superfamily
af_I6WZS8_1_105_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9524 1 96 3.40.50.720
af_O53407_4_153_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9308 2 144 3.40.50.720
af_Q10SL7_36_116_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8946 2 68 3.40.50.720
af_O53407_4_153_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8776 2 144 3.40.50.720
af_I6WZS8_1_105_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8652 1 96 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A1A2PND8-F1-model_v4 Uncharacterized protein 1.002 1 64
AF-A0A2S9FJU8-F1-model_v4 Dihydrodipicolinate reductase 0.9932 1 117 GO:0008839
GO:0009089
AF-A0A4Q3IZA5-F1-model_v4 deleted 0.9929 3 72
AF-A0A1X2LTL0-F1-model_v4 Dihydrodipicolinate reductase 0.9913 3 344
AF-A0A1S1K6I1-F1-model_v4 Dihydrodipicolinate reductase N-terminal domain-containing protein 0.9899 1 72

Map