F228340

General Info

Members Datasets Scaffolds Average Seq Length
157 93 314 405

Family's Representative Sequence

Representative Sequence 3300049591|Ga0501075_0008694|Ga0501075_0008694_331_1743
Length 470
Sequence MGFWTQLSLTTLAKMNIALAHTSAGTFRCRVSQFMRSNEDESKLPRPNLIVAHAGSTRFESREKIATASLIEDGAHMKLLEKCRNFTEADIAREQGYYPYFKVVESQQGPEAIVDGRQMVMLGSNNYLGLTDHPKVKEATINAVKVFGTGCTGSRYLNGTLSLHEEAELRLAKFMQREGALLFSTGYQTNLGTISALVGKGEFVITDRQDHASIVDGCRLSFGKTLKFRHNDAPDLERILQHLGPDTGKLVVVDGVFSMEGSLTRLPEIVQLCKTHQAVLMVDDAHSLGVLGENGRGTAEHFALEHSVDIVMGTFSKSFASMGGFIATDLQTIDYIKHHARPLIFSASMAPATVATVLAALDIVEHEPERRERLWHNAEYWRHGLQELGFNTGQSETPIVPVILGDDILTFQFWKALFDQGIFTNAAVSPAVAPGSALLRTSVIATHTQVHLDRALDTFWQVGQALQVIS

Samples

Sample ID Description Type Environment
1 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
17 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
18 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
19 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
20 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
21 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
41 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
42 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
43 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
44 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
45 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
46 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
47 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
48 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
49 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
50 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
51 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
52 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
53 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
54 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
55 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
56 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
57 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
58 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
59 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
60 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
61 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
62 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
63 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
66 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
67 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
68 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
69 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
70 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
71 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
72 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
73 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
74 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
78 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
79 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
80 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
81 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
82 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
83 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
84 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
85 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
86 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
87 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
88 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
89 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
90 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
91 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
92 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
93 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.36
Metatranscriptomes 0.64
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 97.45
Stem 0
Stem Tuber 0
Unclassified 7.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501075_0008694 3300049591 Bacteria 7082
2 rootH1_10070837 3300003316 Bacteria 8513
3 rootH1_10036917 3300003323 Bacteria 4755
4 Ga0058860_12177298 3300004801 Bacteria 1669
5 Ga0070683_100144181 3300005329 Bacteria 2257
6 Ga0070666_10000426 3300005335 Bacteria 26024
7 Ga0070689_100008255 3300005340 Bacteria 7327
8 Ga0070687_100033897 3300005343 Bacteria 2524
9 Ga0070705_100084320 3300005440 Bacteria 1960
10 Ga0070708_100288784 3300005445 Bacteria 1544
11 Ga0070681_10214153 3300005458 Bacteria 1843
12 Ga0070706_100049621 3300005467 Unclassified 3873
13 Ga0070706_100116586 3300005467 Unclassified 2487
14 Ga0070684_100015578 3300005535 Bacteria 6197
15 Ga0070664_100057777 3300005564 Bacteria 3298
16 Ga0068856_100013934 3300005614 Bacteria 7775
17 Ga0068856_100271092 3300005614 Bacteria 1713
18 Ga0068852_100049373 3300005616 Bacteria 3600
19 Ga0068858_100058470 3300005842 Bacteria 3565
20 Ga0081538_10011766 3300005981 Bacteria 7062
21 Ga0081538_10021040 3300005981 Unclassified 4781
22 Ga0075428_100000661 3300006844 Bacteria 35429
23 Ga0075428_100045966 3300006844 Bacteria 4796
24 Ga0075430_100013036 3300006846 Bacteria 7086
25 Ga0075430_100021021 3300006846 Bacteria 5548
26 Ga0075430_100242213 3300006846 Bacteria 1494
27 Ga0075431_100085238 3300006847 Bacteria 3261
28 Ga0075431_100182200 3300006847 Bacteria 2155
29 Ga0075433_10000722 3300006852 Bacteria 22607
30 Ga0075433_10053209 3300006852 Bacteria 3529
31 Ga0075434_100023935 3300006871 Bacteria 5962
32 Ga0075429_100102919 3300006880 Bacteria 2493
33 Ga0075429_100163440 3300006880 Bacteria 1950
34 Ga0075435_100276185 3300007076 Bacteria 1434
35 Ga0105240_10315017 3300009093 Bacteria 1785
36 Ga0111539_10000048 3300009094 Bacteria 119733
37 Ga0111539_10071539 3300009094 Bacteria 4092
38 Ga0111539_10500105 3300009094 Bacteria 1416
39 Ga0114129_10004446 3300009147 Bacteria 19780
40 Ga0114129_10022348 3300009147 Bacteria 8978
41 Ga0114129_10515950 3300009147 Bacteria 1559
42 Ga0105239_10044904 3300010375 Bacteria 4843
43 Ga0163163_10000040 3300014325 Bacteria 147484
44 Ga0163163_10209582 3300014325 Bacteria 1998
45 Ga0207680_10008787 3300025903 Bacteria 4979
46 Ga0207684_10062718 3300025910 Unclassified 3156
47 Ga0207671_10160261 3300025914 Bacteria 1742
48 Ga0207693_10057552 3300025915 Bacteria 3047
49 Ga0207662_10109914 3300025918 Bacteria 1718
50 Ga0207711_10067683 3300025941 Bacteria 3092
51 Ga0207661_10024623 3300025944 Bacteria 4564
52 Ga0207679_10031491 3300025945 Bacteria 3712
53 Ga0207679_10031619 3300025945 Bacteria 3706
54 Ga0207703_10066094 3300026035 Bacteria 2974
55 Ga0207428_10003811 3300027907 Bacteria 14463
56 Ga0207428_10221982 3300027907 Bacteria 1416
57 Ga0265322_10006726 3300028654 Unclassified 3377
58 Ga0265338_10008239 3300028800 Bacteria 12695
59 Ga0265338_10027401 3300028800 Bacteria 5717
60 Ga0265332_10018247 3300031238 Bacteria 3095
61 Ga0265320_10024087 3300031240 Bacteria 3227
62 Ga0265320_10050181 3300031240 Bacteria 2029
63 Ga0265329_10047779 3300031242 Bacteria 1365
64 Ga0265339_10011862 3300031249 Bacteria 5346
65 Ga0265316_10002369 3300031344 Bacteria 19617
66 Ga0265316_10018859 3300031344 Bacteria 5923
67 Ga0265316_10024915 3300031344 Bacteria 5001
68 Ga0265316_10030937 3300031344 Bacteria 4382
69 Ga0265313_10003246 3300031595 Bacteria 13360
70 Ga0265313_10012066 3300031595 Bacteria 5322
71 Ga0316579_10029397 3300031691 Bacteria 2508
72 Ga0265342_10000241 3300031712 Bacteria 61465
73 Ga0265342_10000470 3300031712 Bacteria 43734
74 Ga0316576_10000473 3300031727 Bacteria 18863
75 Ga0316576_10004813 3300031727 Bacteria 8158
76 Ga0316576_10028808 3300031727 Unclassified 3919
77 Ga0316578_10000277 3300031728 Bacteria 15506
78 Ga0316577_10000307 3300031733 Bacteria 17909
79 Ga0316577_10000393 3300031733 Bacteria 16730
80 Ga0316577_10002329 3300031733 Bacteria 9376
81 Ga0316577_10004645 3300031733 Bacteria 7123
82 Ga0316577_10054761 3300031733 Bacteria 2226
83 Ga0316577_10065423 3300031733 Bacteria 2029
84 Ga0316577_10109630 3300031733 Bacteria 1549
85 Ga0316577_10112028 3300031733 Bacteria 1531
86 Ga0373955_0093841 3300035172 Bacteria 1714
87 Ga0373933_0007117 3300035724 Bacteria 6091
88 Ga0373937_0007650 3300036401 Bacteria 9362
89 Ga0316582_0000064 3300036647 Bacteria 26472
90 Ga0316582_0016343 3300036647 Bacteria 4266
91 Ga0316582_0049518 3300036647 Unclassified 2658
92 Ga0316584_0000625 3300036712 Bacteria 19191
93 Ga0316584_0019911 3300036712 Bacteria 4856
94 Ga0316584_0028162 3300036712 Bacteria 4140
95 Ga0316584_0032777 3300036712 Unclassified 3845
96 Ga0316584_0035121 3300036712 Unclassified 3719
97 Ga0316584_0084506 3300036712 Bacteria 2377
98 Ga0316584_0102279 3300036712 Bacteria 2146
99 Ga0316584_0131894 3300036712 Bacteria 1866
100 Ga0395900_0000358 3300037418 Bacteria 66350
101 Ga0395905_0143212 3300037471 Bacteria 2249
102 Ga0316581_0000152 3300037588 Bacteria 10799
103 Ga0316581_0011509 3300037588 Bacteria 2476
104 Ga0400489_38386 3300039093 Bacteria 5305
105 Ga0451577_0005872 3300042876 Bacteria 12411
106 Ga0451577_0017997 3300042876 Bacteria 6515
107 Ga0451577_0079918 3300042876 Bacteria 2915
108 Ga0453684_0000010 3300044712 Bacteria 1133422
109 Ga0453684_0000036 3300044712 Bacteria 711481
110 Ga0453684_0000653 3300044712 Bacteria 124620
111 Ga0453684_0009041 3300044712 Bacteria 17582
112 Ga0453684_0011303 3300044712 Bacteria 15011
113 Ga0453684_0022333 3300044712 Bacteria 9392
114 Ga0453684_0032619 3300044712 Bacteria 7283
115 Ga0453684_0093934 3300044712 Bacteria 3692
116 Ga0453684_0166537 3300044712 Unclassified 2601
117 Ga0451576_0045697 3300045051 Bacteria 4611
118 Ga0451576_0081103 3300045051 Bacteria 3374
119 Ga0495653_0003778 3300046463 Bacteria 12254
120 Ga0495606_0030352 3300046507 Bacteria 3778
121 Ga0495618_0027012 3300046514 Bacteria 3573
122 Ga0495666_0042496 3300046526 Bacteria 2198
123 Ga0495665_0116956 3300046531 Bacteria 1397
124 Ga0495640_0057553 3300046533 Bacteria 2653
125 Ga0495586_0004454 3300046535 Bacteria 7482
126 Ga0495647_0030582 3300046681 Bacteria 1999
127 Ga0501031_0104244 3300049568 Bacteria 1851
128 Ga0501040_0111873 3300049576 Bacteria 1910
129 Ga0501040_0125660 3300049576 Bacteria 1802
130 Ga0501042_0083013 3300049578 Bacteria 2297
131 Ga0501071_0022517 3300049587 Bacteria 4393
132 Ga0501072_0043086 3300049588 Bacteria 3547
133 Ga0501074_0035723 3300049590 Bacteria 3601
134 Ga0501075_0206569 3300049591 Bacteria 1498
135 Ga0501076_0029711 3300049592 Bacteria 4252
136 Ga0501076_0211887 3300049592 Bacteria 1583
137 Ga0501077_0038821 3300049593 Bacteria 3032
138 Ga0501079_0059642 3300049741 Bacteria 2943
139 Ga0501081_0154194 3300049743 Bacteria 1652
140 Ga0501081_0181136 3300049743 Bacteria 1524
141 nmdc:mga05p37_120599_c1 3300050507 Bacteria 3222
142 nmdc:mga05p37_3264_c1 3300050507 Bacteria 18895
143 nmdc:mga05p37_43404_c1 3300050507 Bacteria 5532
144 nmdc:mga09592_229361_c1 3300050508 Bacteria 1609
145 nmdc:mga0qj67_115686_c1 3300050509 Bacteria 2167
146 nmdc:mga0qj67_270988_c1 3300050509 Bacteria 1376
147 nmdc:mga0qj67_6103_c1 3300050509 Bacteria 8830
148 nmdc:mga06r32_233151_c1 3300050510 Bacteria 1829
149 nmdc:mga08y16_2905_c1 3300050511 Bacteria 17624
150 nmdc:mga0n895_16868_c1 3300050512 Bacteria 6714
151 nmdc:mga0rr50_34182_c1 3300050513 Bacteria 3639
152 nmdc:mga0a205_125_c1 3300050515 Bacteria 39543
153 nmdc:mga0a205_42085_c1 3300050515 Bacteria 4401
154 Ga0501082_0040922 3300060353 Bacteria 3996
155 Ga0501082_0080343 3300060353 Unclassified 2814
156 Ga0501082_0095026 3300060353 Bacteria 2576
157 Ga0530510_0037535 3300061734 Bacteria 3495
158 Ga0501075_0008694
159 rootH1_10070837
160 rootH1_10036917
161 Ga0058860_12177298
162 Ga0070683_100144181
163 Ga0070666_10000426
164 Ga0070689_100008255
165 Ga0070687_100033897
166 Ga0070705_100084320
167 Ga0070708_100288784
168 Ga0070681_10214153
169 Ga0070706_100049621
170 Ga0070706_100116586
171 Ga0070684_100015578
172 Ga0070664_100057777
173 Ga0068856_100013934
174 Ga0068856_100271092
175 Ga0068852_100049373
176 Ga0068858_100058470
177 Ga0081538_10011766
178 Ga0081538_10021040
179 Ga0075428_100000661
180 Ga0075428_100045966
181 Ga0075430_100013036
182 Ga0075430_100021021
183 Ga0075430_100242213
184 Ga0075431_100085238
185 Ga0075431_100182200
186 Ga0075433_10000722
187 Ga0075433_10053209
188 Ga0075434_100023935
189 Ga0075429_100102919
190 Ga0075429_100163440
191 Ga0075435_100276185
192 Ga0105240_10315017
193 Ga0111539_10000048
194 Ga0111539_10071539
195 Ga0111539_10500105
196 Ga0114129_10004446
197 Ga0114129_10022348
198 Ga0114129_10515950
199 Ga0105239_10044904
200 Ga0163163_10000040
201 Ga0163163_10209582
202 Ga0207680_10008787
203 Ga0207684_10062718
204 Ga0207671_10160261
205 Ga0207693_10057552
206 Ga0207662_10109914
207 Ga0207711_10067683
208 Ga0207661_10024623
209 Ga0207679_10031491
210 Ga0207679_10031619
211 Ga0207703_10066094
212 Ga0207428_10003811
213 Ga0207428_10221982
214 Ga0265322_10006726
215 Ga0265338_10008239
216 Ga0265338_10027401
217 Ga0265332_10018247
218 Ga0265320_10024087
219 Ga0265320_10050181
220 Ga0265329_10047779
221 Ga0265339_10011862
222 Ga0265316_10002369
223 Ga0265316_10018859
224 Ga0265316_10024915
225 Ga0265316_10030937
226 Ga0265313_10003246
227 Ga0265313_10012066
228 Ga0316579_10029397
229 Ga0265342_10000241
230 Ga0265342_10000470
231 Ga0316576_10000473
232 Ga0316576_10004813
233 Ga0316576_10028808
234 Ga0316578_10000277
235 Ga0316577_10000307
236 Ga0316577_10000393
237 Ga0316577_10002329
238 Ga0316577_10004645
239 Ga0316577_10054761
240 Ga0316577_10065423
241 Ga0316577_10109630
242 Ga0316577_10112028
243 Ga0373955_0093841
244 Ga0373933_0007117
245 Ga0373937_0007650
246 Ga0316582_0000064
247 Ga0316582_0016343
248 Ga0316582_0049518
249 Ga0316584_0000625
250 Ga0316584_0019911
251 Ga0316584_0028162
252 Ga0316584_0032777
253 Ga0316584_0035121
254 Ga0316584_0084506
255 Ga0316584_0102279
256 Ga0316584_0131894
257 Ga0395900_0000358
258 Ga0395905_0143212
259 Ga0316581_0000152
260 Ga0316581_0011509
261 Ga0400489_38386
262 Ga0451577_0005872
263 Ga0451577_0017997
264 Ga0451577_0079918
265 Ga0453684_0000010
266 Ga0453684_0000036
267 Ga0453684_0000653
268 Ga0453684_0009041
269 Ga0453684_0011303
270 Ga0453684_0022333
271 Ga0453684_0032619
272 Ga0453684_0093934
273 Ga0453684_0166537
274 Ga0451576_0045697
275 Ga0451576_0081103
276 Ga0495653_0003778
277 Ga0495606_0030352
278 Ga0495618_0027012
279 Ga0495666_0042496
280 Ga0495665_0116956
281 Ga0495640_0057553
282 Ga0495586_0004454
283 Ga0495647_0030582
284 Ga0501031_0104244
285 Ga0501040_0111873
286 Ga0501040_0125660
287 Ga0501042_0083013
288 Ga0501071_0022517
289 Ga0501072_0043086
290 Ga0501074_0035723
291 Ga0501075_0206569
292 Ga0501076_0029711
293 Ga0501076_0211887
294 Ga0501077_0038821
295 Ga0501079_0059642
296 Ga0501081_0154194
297 Ga0501081_0181136
298 nmdc:mga05p37_120599_c1
299 nmdc:mga05p37_3264_c1
300 nmdc:mga05p37_43404_c1
301 nmdc:mga09592_229361_c1
302 nmdc:mga0qj67_115686_c1
303 nmdc:mga0qj67_270988_c1
304 nmdc:mga0qj67_6103_c1
305 nmdc:mga06r32_233151_c1
306 nmdc:mga08y16_2905_c1
307 nmdc:mga0n895_16868_c1
308 nmdc:mga0rr50_34182_c1
309 nmdc:mga0a205_125_c1
310 nmdc:mga0a205_42085_c1
311 Ga0501082_0040922
312 Ga0501082_0080343
313 Ga0501082_0095026
314 Ga0530510_0037535

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

117

459

0.94

PF01053

Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

136

344

0.85

PF00266

Aminotran_5

Aminotransferase class-V

143

291

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
8guh-assembly1.cif.gz_A serine palmitoyltransferase from sphingobacterium multivorum complexed with tris 0.9854 1 395
8guh-assembly1.cif.gz_A serine palmitoyltransferase from sphingobacterium multivorum complexed with tris 0.983 1 395
2jg2-assembly1.cif.gz_A high resolution structure of spt with plp internal aldimine 0.9654 3 396
4bmk-assembly1.cif.gz_A serine palmitoyltransferase k265a from s. paucimobilis with bound plp- myriocin aldimine 0.9647 3 396
2w8t-assembly1.cif.gz_A-2 spt with plp, n100c 0.9646 3 396
ID Description Score Start End Superfamily
3a2bA01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 1 295 392 3.90.1150.10
3a2bA02 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.985 61 291 3.40.640.10
af_P0AB77_58_296_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9697 59 293 3.40.640.10
af_I1JW06_395_456_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9663 324 384 3.90.1150.10
af_O94069_405_493_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9655 302 381 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A7Y6UBQ4-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9961 302 395 GO:0008483
GO:0009058
GO:0030170
AF-A0A4R8DTN7-F1-model_v4 Serine palmitoyltransferase 0.9905 1 400 GO:0009058
GO:0016740
GO:0030170
AF-A0A3C0S474-F1-model_v4 8-amino-7-oxononanoate synthase 0.9891 272 398 GO:0009058
GO:0030170
AF-A0A1F5UL79-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.989 2 352 GO:0009058
GO:0016740
GO:0030170
AF-A0A1F9Z323-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9858 16 395 GO:0009058
GO:0016740
GO:0030170

Map