F228118

General Info

Members Datasets Scaffolds Average Seq Length
157 110 314 260

Family's Representative Sequence

Representative Sequence 3300047317|Ga0495604_0000047|Ga0495604_0000047_72247_73110
Length 287
Sequence MSVPEEAVATSLPAGSQGRLVICPTPIGNLGDVTLRALDALRGADVVACEDTRRTRVLLDRYQIAGALVSFHEHNEDTRASQLAERIDGGDVVVLVSDAGMPLVSDPGYALVRACLHAGLPVEVLPGPSSVTTAVVASALPAQRWRFVGFLPRRGAGSTRGELARLLADTPETLIAFESPGRLAATLALLAELDPERPAAVCRELTKLHEEVRRGSAAELAAHYREHSPRGEIVLVVGAASADAAGREDAIAALRELVDAGARPRAAAAVVAKLTGLGANELYRSLI

Samples

Sample ID Description Type Environment
1 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
37 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
40 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
65 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
68 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
69 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
70 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
71 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
72 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
73 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
74 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
75 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
76 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
77 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
78 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
79 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
80 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
81 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
82 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
83 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
84 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
85 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
86 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
87 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
88 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
89 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
90 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
91 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
92 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
93 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
94 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
101 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
102 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
103 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
104 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
105 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
106 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
107 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
108 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
109 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
110 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.64
Nodule 0
Rhizoplane 5.73
Rhizosphere 84.08
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495604_0000047 3300047317 Bacteria 109717
2 JGI25407J50210_10021160 3300003373 Bacteria 1692
3 Ga0070658_10225294 3300005327 Bacteria 1586
4 Ga0070658_10497408 3300005327 Bacteria 1053
5 Ga0068869_100046085 3300005334 Bacteria 3143
6 Ga0070682_100292574 3300005337 Bacteria 1192
7 Ga0070660_100092899 3300005339 Bacteria 2382
8 Ga0070674_100510327 3300005356 Bacteria 1003
9 Ga0070688_100185394 3300005365 Bacteria 1446
10 Ga0070659_100252564 3300005366 Bacteria 1462
11 Ga0070659_100667810 3300005366 Bacteria 897
12 Ga0070714_100002463 3300005435 Bacteria 13653
13 Ga0070713_100035172 3300005436 Bacteria 4030
14 Ga0070713_100042111 3300005436 Bacteria 3725
15 Ga0070713_100043514 3300005436 Bacteria 3671
16 Ga0070711_100002289 3300005439 Bacteria 10862
17 Ga0070700_100168700 3300005441 Bacteria 1514
18 Ga0070707_100424754 3300005468 Bacteria 1289
19 Ga0070679_100046537 3300005530 Bacteria 4324
20 Ga0070684_100596235 3300005535 Bacteria 1027
21 Ga0070672_100325651 3300005543 Bacteria 1307
22 Ga0070696_100055787 3300005546 Bacteria 2755
23 Ga0070664_100111429 3300005564 Bacteria 2389
24 Ga0070664_100335776 3300005564 Bacteria 1372
25 Ga0068852_100250148 3300005616 Bacteria 1698
26 Ga0068859_100308884 3300005617 Bacteria 1675
27 Ga0068861_100150979 3300005719 Bacteria 1906
28 Ga0068870_10228406 3300005840 Bacteria 1143
29 Ga0081455_10080622 3300005937 Bacteria 2667
30 Ga0081538_10000935 3300005981 Bacteria 31514
31 Ga0081538_10006025 3300005981 Bacteria 10776
32 Ga0081538_10006292 3300005981 Bacteria 10491
33 Ga0081538_10039067 3300005981 Bacteria 3049
34 Ga0081538_10053360 3300005981 Bacteria 2403
35 Ga0070717_10049666 3300006028 Bacteria 3444
36 Ga0075363_100006398 3300006048 Bacteria 5344
37 Ga0070712_100000009 3300006175 Bacteria 143615
38 Ga0070712_100049205 3300006175 Bacteria 2926
39 Ga0075434_100295967 3300006871 Bacteria 1638
40 Ga0097620_100308857 3300006931 Bacteria 1675
41 Ga0105240_10007080 3300009093 Bacteria 16353
42 Ga0105240_10297884 3300009093 Bacteria 1846
43 Ga0111539_10335336 3300009094 Bacteria 1760
44 Ga0105245_10266783 3300009098 Bacteria 1668
45 Ga0114129_11167847 3300009147 Bacteria 960
46 Ga0105242_10353529 3300009176 Bacteria 1358
47 Ga0105246_10063454 3300011119 Bacteria 2577
48 Ga0157371_10298216 3300013102 Bacteria 1167
49 Ga0163163_10838496 3300014325 Bacteria 983
50 Ga0157377_10055993 3300014745 Bacteria 2238
51 Ga0213874_10034071 3300021377 Bacteria 1489
52 Ga0213876_10006917 3300021384 Bacteria 6181
53 Ga0213876_10031841 3300021384 Bacteria 2782
54 Ga0213875_10001672 3300021388 Bacteria 13961
55 Ga0213875_10016199 3300021388 Bacteria 3616
56 Ga0207705_10274975 3300025909 Bacteria 1288
57 Ga0207705_10365099 3300025909 Bacteria 1114
58 Ga0207695_10013143 3300025913 Bacteria 9882
59 Ga0207695_10343586 3300025913 Bacteria 1380
60 Ga0207693_10000036 3300025915 Bacteria 109562
61 Ga0207693_10013541 3300025915 Bacteria 6573
62 Ga0207693_10072672 3300025915 Bacteria 2693
63 Ga0207663_10307356 3300025916 Bacteria 1187
64 Ga0207657_10052315 3300025919 Bacteria 3545
65 Ga0207657_10127989 3300025919 Bacteria 2084
66 Ga0207649_10084365 3300025920 Bacteria 2065
67 Ga0207652_10191753 3300025921 Bacteria 1838
68 Ga0207646_10357144 3300025922 Bacteria 1320
69 Ga0207700_10069781 3300025928 Bacteria 2699
70 Ga0207700_10243331 3300025928 Bacteria 1534
71 Ga0207664_10003031 3300025929 Bacteria 11172
72 Ga0207664_10173836 3300025929 Bacteria 1845
73 Ga0207690_10134956 3300025932 Bacteria 1811
74 Ga0207690_10462215 3300025932 Bacteria 1021
75 Ga0207665_10095898 3300025939 Bacteria 2062
76 Ga0207691_10472926 3300025940 Bacteria 1065
77 Ga0207679_10083141 3300025945 Bacteria 2453
78 Ga0207677_10117396 3300026023 Bacteria 1994
79 Ga0207708_10218474 3300026075 Bacteria 1526
80 Ga0207698_10137317 3300026142 Bacteria 2100
81 Ga0207428_10211131 3300027907 Bacteria 1458
82 Ga0268264_10758769 3300028381 Bacteria 967
83 Ga0265319_1000447 3300028563 Bacteria 29401
84 Ga0265338_10061174 3300028800 Bacteria 3302
85 Ga0265320_10021125 3300031240 Bacteria 3510
86 Ga0265327_10001367 3300031251 Bacteria 31397
87 Ga0395898_0087517 3300037466 Bacteria 3001
88 Ga0395898_0808229 3300037466 Bacteria 878
89 Ga0436364_0632249 3300037853 Bacteria 14129
90 Ga0436364_0692693 3300037853 Bacteria 11398
91 Ga0436364_1239756 3300037853 Bacteria 2033
92 Ga0436365_1145541 3300039437 Bacteria 28071
93 Ga0436365_1186307 3300039437 Bacteria 2478
94 Ga0436365_1199158 3300039437 Bacteria 3684
95 Ga0436360_0498276 3300039438 Bacteria 3265
96 Ga0436361_0654813 3300039447 Bacteria 2594
97 Ga0436363_0364566 3300039450 Bacteria 6492
98 Ga0436363_0637610 3300039450 Bacteria 3156
99 Ga0436363_1067272 3300039450 Bacteria 1993
100 Ga0436363_1714897 3300039450 Bacteria 1381
101 Ga0436362_0057626 3300039453 Bacteria 3355
102 Ga0436362_1004358 3300039453 Bacteria 1698
103 Ga0466969_0089158 3300044656 Bacteria 1463
104 Ga0466966_0027948 3300044684 Bacteria 3677
105 Ga0466966_0115517 3300044684 Bacteria 1652
106 Ga0466966_0182901 3300044684 Bacteria 1272
107 Ga0466961_0003705 3300044693 Bacteria 9549
108 Ga0466961_0032833 3300044693 Bacteria 3335
109 Ga0466963_0004642 3300044694 Bacteria 8013
110 Ga0466963_0008240 3300044694 Bacteria 6246
111 Ga0466963_0012916 3300044694 Bacteria 5118
112 Ga0466963_0015639 3300044694 Bacteria 4705
113 Ga0466963_0033444 3300044694 Bacteria 3338
114 Ga0466971_0001332 3300044719 Bacteria 10319
115 Ga0466971_0034801 3300044719 Bacteria 2258
116 Ga0466968_0074763 3300044735 Bacteria 1480
117 Ga0466970_0239555 3300044765 Bacteria 1015
118 Ga0466970_0273902 3300044765 Bacteria 948
119 Ga0466957_0012468 3300044842 Bacteria 4920
120 Ga0466957_0086861 3300044842 Bacteria 1955
121 Ga0466959_0001077 3300045049 Bacteria 16317
122 Ga0466959_0037957 3300045049 Bacteria 3560
123 Ga0466959_0070778 3300045049 Bacteria 2527
124 Ga0466959_0281567 3300045049 Bacteria 1141
125 Ga0466958_0028141 3300045836 Bacteria 3330
126 Ga0466958_0053674 3300045836 Bacteria 2444
127 Ga0466967_0003529 3300045976 Bacteria 10232
128 Ga0466967_0007403 3300045976 Bacteria 7915
129 Ga0466967_0548884 3300045976 Bacteria 1137
130 Ga0495664_0000007 3300046477 Bacteria 386710
131 Ga0495645_0000879 3300046543 Bacteria 20478
132 Ga0496102_0117526 3300048905 Bacteria 2482
133 Ga0496104_0097410 3300048907 Bacteria 2815
134 Ga0496105_0124720 3300048908 Bacteria 2123
135 Ga0496110_0585301 3300048913 Bacteria 1013
136 Ga0496112_0000280 3300048915 Bacteria 33010
137 Ga0496113_0470920 3300048916 Bacteria 1009
138 Ga0496114_0382089 3300048917 Bacteria 1247
139 Ga0496115_0000329 3300048918 Bacteria 40480
140 Ga0496115_0006480 3300048918 Bacteria 8580
141 Ga0501031_0051179 3300049568 Bacteria 2690
142 Ga0501036_0347566 3300049572 Bacteria 1238
143 Ga0501039_0067631 3300049575 Bacteria 2774
144 Ga0501042_0077547 3300049578 Bacteria 2379
145 Ga0501046_0040699 3300049580 Bacteria 3712
146 Ga0501048_0251196 3300049582 Bacteria 1255
147 Ga0501068_0159841 3300049584 Bacteria 1420
148 Ga0501071_0070056 3300049587 Bacteria 2554
149 Ga0501074_0038444 3300049590 Bacteria 3468
150 Ga0501076_0124630 3300049592 Bacteria 2087
151 Ga0501077_0042535 3300049593 Bacteria 2888
152 nmdc:mga05p37_336875_c1 3300050507 Bacteria 1780
153 nmdc:mga08y16_310438_c1 3300050511 Bacteria 1624
154 Ga0495601_0041235 3300053077 Bacteria 2893
155 Ga0501084_0137560 3300054114 Bacteria 2056
156 Ga0501082_0119162 3300060353 Bacteria 2287
157 Ga0466962_0002263 3300061719 Bacteria 9123
158 Ga0495604_0000047
159 JGI25407J50210_10021160
160 Ga0070658_10225294
161 Ga0070658_10497408
162 Ga0068869_100046085
163 Ga0070682_100292574
164 Ga0070660_100092899
165 Ga0070674_100510327
166 Ga0070688_100185394
167 Ga0070659_100252564
168 Ga0070659_100667810
169 Ga0070714_100002463
170 Ga0070713_100035172
171 Ga0070713_100042111
172 Ga0070713_100043514
173 Ga0070711_100002289
174 Ga0070700_100168700
175 Ga0070707_100424754
176 Ga0070679_100046537
177 Ga0070684_100596235
178 Ga0070672_100325651
179 Ga0070696_100055787
180 Ga0070664_100111429
181 Ga0070664_100335776
182 Ga0068852_100250148
183 Ga0068859_100308884
184 Ga0068861_100150979
185 Ga0068870_10228406
186 Ga0081455_10080622
187 Ga0081538_10000935
188 Ga0081538_10006025
189 Ga0081538_10006292
190 Ga0081538_10039067
191 Ga0081538_10053360
192 Ga0070717_10049666
193 Ga0075363_100006398
194 Ga0070712_100000009
195 Ga0070712_100049205
196 Ga0075434_100295967
197 Ga0097620_100308857
198 Ga0105240_10007080
199 Ga0105240_10297884
200 Ga0111539_10335336
201 Ga0105245_10266783
202 Ga0114129_11167847
203 Ga0105242_10353529
204 Ga0105246_10063454
205 Ga0157371_10298216
206 Ga0163163_10838496
207 Ga0157377_10055993
208 Ga0213874_10034071
209 Ga0213876_10006917
210 Ga0213876_10031841
211 Ga0213875_10001672
212 Ga0213875_10016199
213 Ga0207705_10274975
214 Ga0207705_10365099
215 Ga0207695_10013143
216 Ga0207695_10343586
217 Ga0207693_10000036
218 Ga0207693_10013541
219 Ga0207693_10072672
220 Ga0207663_10307356
221 Ga0207657_10052315
222 Ga0207657_10127989
223 Ga0207649_10084365
224 Ga0207652_10191753
225 Ga0207646_10357144
226 Ga0207700_10069781
227 Ga0207700_10243331
228 Ga0207664_10003031
229 Ga0207664_10173836
230 Ga0207690_10134956
231 Ga0207690_10462215
232 Ga0207665_10095898
233 Ga0207691_10472926
234 Ga0207679_10083141
235 Ga0207677_10117396
236 Ga0207708_10218474
237 Ga0207698_10137317
238 Ga0207428_10211131
239 Ga0268264_10758769
240 Ga0265319_1000447
241 Ga0265338_10061174
242 Ga0265320_10021125
243 Ga0265327_10001367
244 Ga0395898_0087517
245 Ga0395898_0808229
246 Ga0436364_0632249
247 Ga0436364_0692693
248 Ga0436364_1239756
249 Ga0436365_1145541
250 Ga0436365_1186307
251 Ga0436365_1199158
252 Ga0436360_0498276
253 Ga0436361_0654813
254 Ga0436363_0364566
255 Ga0436363_0637610
256 Ga0436363_1067272
257 Ga0436363_1714897
258 Ga0436362_0057626
259 Ga0436362_1004358
260 Ga0466969_0089158
261 Ga0466966_0027948
262 Ga0466966_0115517
263 Ga0466966_0182901
264 Ga0466961_0003705
265 Ga0466961_0032833
266 Ga0466963_0004642
267 Ga0466963_0008240
268 Ga0466963_0012916
269 Ga0466963_0015639
270 Ga0466963_0033444
271 Ga0466971_0001332
272 Ga0466971_0034801
273 Ga0466968_0074763
274 Ga0466970_0239555
275 Ga0466970_0273902
276 Ga0466957_0012468
277 Ga0466957_0086861
278 Ga0466959_0001077
279 Ga0466959_0037957
280 Ga0466959_0070778
281 Ga0466959_0281567
282 Ga0466958_0028141
283 Ga0466958_0053674
284 Ga0466967_0003529
285 Ga0466967_0007403
286 Ga0466967_0548884
287 Ga0495664_0000007
288 Ga0495645_0000879
289 Ga0496102_0117526
290 Ga0496104_0097410
291 Ga0496105_0124720
292 Ga0496110_0585301
293 Ga0496112_0000280
294 Ga0496113_0470920
295 Ga0496114_0382089
296 Ga0496115_0000329
297 Ga0496115_0006480
298 Ga0501031_0051179
299 Ga0501036_0347566
300 Ga0501039_0067631
301 Ga0501042_0077547
302 Ga0501046_0040699
303 Ga0501048_0251196
304 Ga0501068_0159841
305 Ga0501071_0070056
306 Ga0501074_0038444
307 Ga0501076_0124630
308 Ga0501077_0042535
309 nmdc:mga05p37_336875_c1
310 nmdc:mga08y16_310438_c1
311 Ga0495601_0041235
312 Ga0501084_0137560
313 Ga0501082_0119162
314 Ga0466962_0002263

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00590

TP_methylase

Tetrapyrrole (Corrin/Porphyrin) Methylases

19

221

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3hh1-assembly2.cif.gz_C the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.8976 1 105
3hh1-assembly2.cif.gz_C the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.8895 1 105
3fq6-assembly1.cif.gz_A the crystal structure of a methyltransferase domain from bacteroides thetaiotaomicron vpi 0.8781 106 213
3hh1-assembly1.cif.gz_B the structure of a tetrapyrrole methylase family protein domain from chlorobium tepidum tls 0.8698 1 106
3ffy-assembly1.cif.gz_A-2 putative tetrapyrrole (corrin/porphyrin) methyltransferase from bacteroides fragilis. 0.8593 106 213
ID Description Score Start End Superfamily
af_Q338C6_169_282_3.30.950.10 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9386 107 213 3.30.950.10
af_P9WGW7_115_230_3.30.950.10 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9137 106 216 3.30.950.10
3kwpA02 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9099 106 215 3.30.950.10
af_Q2G1S1_111_230_3.30.950.10 Alpha Beta;2-Layer Sandwich;Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2;Tetrapyrrole methylase, C-terminal domain 0.9056 106 219 3.30.950.10
3hh1C00 Alpha Beta;3-Layer(aba) Sandwich;Cobalt-precorrin-4 Transmethylase; domain 1;Tetrapyrrole methylase, N-terminal domain 0.8949 1 105 3.40.1010.10
ID Description Score Start End GO Terms
AF-A0A3C1WV85-F1-model_v4 16S rRNA (Cytidine(1402)-2'-O)-methyltransferase 0.9401 2 82 GO:0008168
GO:0032259
AF-A0A7C6TVT8-F1-model_v4 16S rRNA (Cytidine(1402)-2'-O)-methyltransferase 0.9349 5 83 GO:0008168
GO:0032259
AF-A0A7C0X1S4-F1-model_v4 16S rRNA (Cytidine(1402)-2'-O)-methyltransferase 0.9316 2 108 GO:0008168
AF-A0A7Y4XYD7-F1-model_v4 16S rRNA (Cytidine(1402)-2'-O)-methyltransferase 0.9274 2 84 GO:0008168
GO:0032259
AF-A0A1Q6V7A8-F1-model_v4 Tetrapyrrole methylase domain-containing protein 0.9253 113 213 GO:0008168

Map