F227443

General Info

Members Datasets Scaffolds Average Seq Length
157 73 314 287

Family's Representative Sequence

Representative Sequence 3300025929|Ga0207664_10130395|Ga0207664_101303952
Length 297
Sequence MTRGPILHRVSAELGAILTAMVTPFDAHGRVDEEAAVRVMHHLVEHSSDGLVMCGTTGEASTLTDEEHLGVIRLAVEEMRGRCTIVAGVGSNDTRHAVELTERATELRPDALLSVNPYYNRPSRRGLIRHYEEIDRATDLPILLYNIPQRTGADLSNDLLAELGQIEHVVGVKQANHSNLAKIDGLQIYAGNDDMLADVLDLGEAGGICTSTHILGDEFHRMVDEPERRRDIHESLSDVYRDMAIAPAAVTNKAALQLIGVLDAGAPRLPYVELDEAELQTIRALLERHGLLETARA

Samples

Sample ID Description Type Environment
1 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
8 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
9 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
10 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
11 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
12 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
13 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
14 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
15 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
16 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
23 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
24 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
25 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
26 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
27 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
28 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
29 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
30 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
31 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
32 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
33 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
34 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
35 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
36 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
37 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
38 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
39 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
40 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
41 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
42 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
43 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
44 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
45 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
46 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
47 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
48 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
49 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
50 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
51 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
52 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
53 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
54 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
55 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
56 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
57 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
58 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
59 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
60 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
61 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
62 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
63 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
64 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
65 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
66 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
67 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
68 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
69 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
70 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
71 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
72 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
73 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.46
Rhizosphere 73.89
Stem 0
Stem Tuber 0
Unclassified 0.64

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207664_10130395 3300025929 Bacteria 2116
2 Ga0070709_10144850 3300005434 Bacteria 1636
3 Ga0070714_100045171 3300005435 Bacteria 3732
4 Ga0070714_100051716 3300005435 Bacteria 3504
5 Ga0070714_100091242 3300005435 Bacteria 2669
6 Ga0070714_100463781 3300005435 Bacteria 1205
7 Ga0070713_100140316 3300005436 Bacteria 2140
8 Ga0070713_100161767 3300005436 Bacteria 1999
9 Ga0070710_10003003 3300005437 Bacteria 8023
10 Ga0070711_100013536 3300005439 Bacteria 5122
11 Ga0068856_100099732 3300005614 Bacteria 2896
12 Ga0068856_100252930 3300005614 Bacteria 1777
13 Ga0070717_10003572 3300006028 Bacteria 11150
14 Ga0070717_10079655 3300006028 Bacteria 2747
15 Ga0070717_10288040 3300006028 Bacteria 1458
16 Ga0070717_10337309 3300006028 Bacteria 1345
17 Ga0070716_100048929 3300006173 Bacteria 2393
18 Ga0070712_100019306 3300006175 Bacteria 4444
19 Ga0075433_10557592 3300006852 Bacteria 1007
20 Ga0213873_10026781 3300021358 Bacteria 1402
21 Ga0213873_10032157 3300021358 Bacteria 1309
22 Ga0213874_10006673 3300021377 Bacteria 2739
23 Ga0213876_10007528 3300021384 Bacteria 5915
24 Ga0213876_10017391 3300021384 Bacteria 3796
25 Ga0213876_10024882 3300021384 Bacteria 3161
26 Ga0213876_10031637 3300021384 Bacteria 2791
27 Ga0213876_10032359 3300021384 Bacteria 2758
28 Ga0213876_10038565 3300021384 Bacteria 2522
29 Ga0213876_10038919 3300021384 Bacteria 2511
30 Ga0213875_10000080 3300021388 Bacteria 114342
31 Ga0213875_10012144 3300021388 Bacteria 4260
32 Ga0213875_10046620 3300021388 Bacteria 2033
33 Ga0213875_10064747 3300021388 Bacteria 1708
34 Ga0207699_10151046 3300025906 Bacteria 1537
35 Ga0207693_10034163 3300025915 Bacteria 4011
36 Ga0207663_10024718 3300025916 Bacteria 3463
37 Ga0207700_10419486 3300025928 Bacteria 1175
38 Ga0207664_10001003 3300025929 Bacteria 18920
39 Ga0207664_10015004 3300025929 Bacteria 5611
40 Ga0207664_10101101 3300025929 Bacteria 2382
41 Ga0207664_10442099 3300025929 Unclassified 1160
42 Ga0207665_10024071 3300025939 Bacteria 4012
43 Ga0207702_10076779 3300026078 Bacteria 2888
44 Ga0307405_10258224 3300031731 Bacteria 1300
45 Ga0373953_0029593 3300035117 Bacteria 2119
46 Ga0373933_0102938 3300035724 Bacteria 1773
47 Ga0373937_0005346 3300036401 Bacteria 10980
48 Ga0395900_0013524 3300037418 Bacteria 8338
49 Ga0395898_0065148 3300037466 Bacteria 3533
50 Ga0436364_0140777 3300037853 Bacteria 47350
51 Ga0436364_0154509 3300037853 Bacteria 2463
52 Ga0436364_0162340 3300037853 Bacteria 5199
53 Ga0436364_0202893 3300037853 Bacteria 2255
54 Ga0436364_0373661 3300037853 Bacteria 4476
55 Ga0436364_0779465 3300037853 Bacteria 2986
56 Ga0436364_0816068 3300037853 Bacteria 21185
57 Ga0436364_0870467 3300037853 Bacteria 13498
58 Ga0436364_1095852 3300037853 Bacteria 2502
59 Ga0436364_1240557 3300037853 Bacteria 4675
60 Ga0436364_1545413 3300037853 Bacteria 3425
61 Ga0436365_0058997 3300039437 Bacteria 4750
62 Ga0436365_0274434 3300039437 Bacteria 5377
63 Ga0436365_0481543 3300039437 Bacteria 11895
64 Ga0436365_0797984 3300039437 Bacteria 12669
65 Ga0436365_1023513 3300039437 Bacteria 4929
66 Ga0436365_1168763 3300039437 Bacteria 90017
67 Ga0436365_1857003 3300039437 Bacteria 3863
68 Ga0436365_1910566 3300039437 Bacteria 5212
69 Ga0436360_0819551 3300039438 Bacteria 2668
70 Ga0436361_0836849 3300039447 Bacteria 1209
71 Ga0436363_1202405 3300039450 Bacteria 1646
72 Ga0436363_1434733 3300039450 Bacteria 4309
73 Ga0436363_1551084 3300039450 Bacteria 3124
74 Ga0436362_0336121 3300039453 Bacteria 2190
75 Ga0436362_0628540 3300039453 Bacteria 1488
76 Ga0436362_1038999 3300039453 Bacteria 1287
77 Ga0436362_1158762 3300039453 Bacteria 3395
78 Ga0466969_0013701 3300044656 Bacteria 4268
79 Ga0466969_0021556 3300044656 Bacteria 3330
80 Ga0466965_0263075 3300044683 Bacteria 928
81 Ga0466966_0011079 3300044684 Bacteria 5986
82 Ga0466966_0088868 3300044684 Bacteria 1920
83 Ga0466966_0146388 3300044684 Bacteria 1442
84 Ga0466961_0011372 3300044693 Bacteria 5691
85 Ga0466961_0014780 3300044693 Bacteria 5016
86 Ga0466961_0069317 3300044693 Bacteria 2239
87 Ga0466961_0120597 3300044693 Bacteria 1647
88 Ga0466961_0164537 3300044693 Bacteria 1382
89 Ga0466961_0294917 3300044693 Bacteria 991
90 Ga0466963_0002836 3300044694 Bacteria 9771
91 Ga0466963_0004479 3300044694 Bacteria 8127
92 Ga0466963_0009804 3300044694 Bacteria 5781
93 Ga0466963_0016874 3300044694 Bacteria 4547
94 Ga0466963_0056554 3300044694 Bacteria 2610
95 Ga0466963_0104412 3300044694 Bacteria 1941
96 Ga0466963_0223274 3300044694 Bacteria 1320
97 Ga0466963_0288955 3300044694 Bacteria 1153
98 Ga0466971_0067007 3300044719 Bacteria 1627
99 Ga0466968_0005436 3300044735 Bacteria 4767
100 Ga0466968_0029389 3300044735 Bacteria 2273
101 Ga0466968_0029847 3300044735 Bacteria 2257
102 Ga0466968_0033658 3300044735 Bacteria 2136
103 Ga0466968_0046183 3300044735 Bacteria 1850
104 Ga0466968_0115058 3300044735 Bacteria 1212
105 Ga0466970_0207256 3300044765 Bacteria 1092
106 Ga0466957_0008619 3300044842 Bacteria 5803
107 Ga0466957_0024643 3300044842 Bacteria 3562
108 Ga0466957_0215695 3300044842 Bacteria 1265
109 Ga0466959_0003050 3300045049 Bacteria 10831
110 Ga0466959_0003369 3300045049 Bacteria 10443
111 Ga0466959_0011415 3300045049 Bacteria 6383
112 Ga0466959_0045034 3300045049 Bacteria 3250
113 Ga0466959_0061619 3300045049 Bacteria 2727
114 Ga0466959_0350892 3300045049 Bacteria 1006
115 Ga0466958_0000815 3300045836 Bacteria 13769
116 Ga0466958_0004803 3300045836 Bacteria 7193
117 Ga0466958_0013587 3300045836 Bacteria 4639
118 Ga0466958_0051365 3300045836 Bacteria 2496
119 Ga0466958_0062754 3300045836 Bacteria 2266
120 Ga0466958_0070625 3300045836 Bacteria 2137
121 Ga0466958_0074925 3300045836 Bacteria 2075
122 Ga0466958_0098900 3300045836 Bacteria 1812
123 Ga0466958_0119803 3300045836 Bacteria 1647
124 Ga0466958_0211396 3300045836 Bacteria 1236
125 Ga0466967_0003042 3300045976 Bacteria 10763
126 Ga0466967_0057003 3300045976 Bacteria 3447
127 Ga0466967_0086919 3300045976 Bacteria 2834
128 Ga0495592_0019765 3300046454 Bacteria 5123
129 Ga0495629_0048646 3300046459 Bacteria 2973
130 Ga0495653_0005339 3300046463 Bacteria 10458
131 Ga0495618_0061439 3300046514 Bacteria 2383
132 Ga0495628_0081696 3300046516 Bacteria 2510
133 Ga0495652_0048863 3300046529 Bacteria 3624
134 Ga0495587_0118163 3300046536 Bacteria 1519
135 Ga0495667_0027162 3300046559 Bacteria 3858
136 Ga0495657_0016877 3300046675 Bacteria 5308
137 Ga0495657_0246534 3300046675 Bacteria 1077
138 Ga0495623_0207110 3300046679 Bacteria 1124
139 Ga0495646_0015218 3300046680 Bacteria 4886
140 Ga0495581_0031225 3300047315 Bacteria 3087
141 Ga0495604_0016593 3300047317 Bacteria 5888
142 Ga0495674_0109433 3300047319 Bacteria 2344
143 Ga0495676_0193645 3300047321 Bacteria 1417
144 Ga0495680_0060751 3300047322 Bacteria 2911
145 Ga0495684_0062135 3300047471 Bacteria 2841
146 Ga0495602_0036598 3300048088 Bacteria 4566
147 Ga0496104_0030380 3300048907 Bacteria 5021
148 Ga0496107_0405505 3300048910 Bacteria 1014
149 Ga0496108_0409802 3300048911 Bacteria 1184
150 Ga0496109_0475957 3300048912 Bacteria 1179
151 Ga0496110_0297475 3300048913 Bacteria 1470
152 Ga0496112_0015802 3300048915 Bacteria 7052
153 Ga0496113_0036537 3300048916 Bacteria 3600
154 Ga0495595_0027792 3300053084 Bacteria 2522
155 Ga0495619_0030269 3300053085 Bacteria 3503
156 Ga0466962_0005395 3300061719 Bacteria 6148
157 Ga0466962_0087406 3300061719 Bacteria 1493
158 Ga0207664_10130395
159 Ga0070709_10144850
160 Ga0070714_100045171
161 Ga0070714_100051716
162 Ga0070714_100091242
163 Ga0070714_100463781
164 Ga0070713_100140316
165 Ga0070713_100161767
166 Ga0070710_10003003
167 Ga0070711_100013536
168 Ga0068856_100099732
169 Ga0068856_100252930
170 Ga0070717_10003572
171 Ga0070717_10079655
172 Ga0070717_10288040
173 Ga0070717_10337309
174 Ga0070716_100048929
175 Ga0070712_100019306
176 Ga0075433_10557592
177 Ga0213873_10026781
178 Ga0213873_10032157
179 Ga0213874_10006673
180 Ga0213876_10007528
181 Ga0213876_10017391
182 Ga0213876_10024882
183 Ga0213876_10031637
184 Ga0213876_10032359
185 Ga0213876_10038565
186 Ga0213876_10038919
187 Ga0213875_10000080
188 Ga0213875_10012144
189 Ga0213875_10046620
190 Ga0213875_10064747
191 Ga0207699_10151046
192 Ga0207693_10034163
193 Ga0207663_10024718
194 Ga0207700_10419486
195 Ga0207664_10001003
196 Ga0207664_10015004
197 Ga0207664_10101101
198 Ga0207664_10442099
199 Ga0207665_10024071
200 Ga0207702_10076779
201 Ga0307405_10258224
202 Ga0373953_0029593
203 Ga0373933_0102938
204 Ga0373937_0005346
205 Ga0395900_0013524
206 Ga0395898_0065148
207 Ga0436364_0140777
208 Ga0436364_0154509
209 Ga0436364_0162340
210 Ga0436364_0202893
211 Ga0436364_0373661
212 Ga0436364_0779465
213 Ga0436364_0816068
214 Ga0436364_0870467
215 Ga0436364_1095852
216 Ga0436364_1240557
217 Ga0436364_1545413
218 Ga0436365_0058997
219 Ga0436365_0274434
220 Ga0436365_0481543
221 Ga0436365_0797984
222 Ga0436365_1023513
223 Ga0436365_1168763
224 Ga0436365_1857003
225 Ga0436365_1910566
226 Ga0436360_0819551
227 Ga0436361_0836849
228 Ga0436363_1202405
229 Ga0436363_1434733
230 Ga0436363_1551084
231 Ga0436362_0336121
232 Ga0436362_0628540
233 Ga0436362_1038999
234 Ga0436362_1158762
235 Ga0466969_0013701
236 Ga0466969_0021556
237 Ga0466965_0263075
238 Ga0466966_0011079
239 Ga0466966_0088868
240 Ga0466966_0146388
241 Ga0466961_0011372
242 Ga0466961_0014780
243 Ga0466961_0069317
244 Ga0466961_0120597
245 Ga0466961_0164537
246 Ga0466961_0294917
247 Ga0466963_0002836
248 Ga0466963_0004479
249 Ga0466963_0009804
250 Ga0466963_0016874
251 Ga0466963_0056554
252 Ga0466963_0104412
253 Ga0466963_0223274
254 Ga0466963_0288955
255 Ga0466971_0067007
256 Ga0466968_0005436
257 Ga0466968_0029389
258 Ga0466968_0029847
259 Ga0466968_0033658
260 Ga0466968_0046183
261 Ga0466968_0115058
262 Ga0466970_0207256
263 Ga0466957_0008619
264 Ga0466957_0024643
265 Ga0466957_0215695
266 Ga0466959_0003050
267 Ga0466959_0003369
268 Ga0466959_0011415
269 Ga0466959_0045034
270 Ga0466959_0061619
271 Ga0466959_0350892
272 Ga0466958_0000815
273 Ga0466958_0004803
274 Ga0466958_0013587
275 Ga0466958_0051365
276 Ga0466958_0062754
277 Ga0466958_0070625
278 Ga0466958_0074925
279 Ga0466958_0098900
280 Ga0466958_0119803
281 Ga0466958_0211396
282 Ga0466967_0003042
283 Ga0466967_0057003
284 Ga0466967_0086919
285 Ga0495592_0019765
286 Ga0495629_0048646
287 Ga0495653_0005339
288 Ga0495618_0061439
289 Ga0495628_0081696
290 Ga0495652_0048863
291 Ga0495587_0118163
292 Ga0495667_0027162
293 Ga0495657_0016877
294 Ga0495657_0246534
295 Ga0495623_0207110
296 Ga0495646_0015218
297 Ga0495581_0031225
298 Ga0495604_0016593
299 Ga0495674_0109433
300 Ga0495676_0193645
301 Ga0495680_0060751
302 Ga0495684_0062135
303 Ga0495602_0036598
304 Ga0496104_0030380
305 Ga0496107_0405505
306 Ga0496108_0409802
307 Ga0496109_0475957
308 Ga0496110_0297475
309 Ga0496112_0015802
310 Ga0496113_0036537
311 Ga0495595_0027792
312 Ga0495619_0030269
313 Ga0466962_0005395
314 Ga0466962_0087406

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00701

DHDPS

Dihydrodipicolinate synthetase family

13

289

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5j5d-assembly1.cif.gz_A crystal structure of dihydrodipicolinate synthase from mycobacterium tuberculosis in complex with alpha-ketopimelic acid 0.9635 5 282
3ird-assembly1.cif.gz_A structure of dihydrodipicolinate synthase from clostridium botulinum 0.9586 5 281
3qze-assembly2.cif.gz_D crystal structure of dapa (pa1010) at 1.6 a resolution 0.9586 6 282
3cpr-assembly1.cif.gz_A the crystal structure of corynebacterium glutamicum dihydrodipicolinate synthase to 2.2 a resolution 0.9564 4 282
5ktl-assembly1.cif.gz_A dihydrodipicolinate synthase from the industrial and evolutionarily important cyanobacteria anabaena variabilis. 0.9553 4 281
ID Description Score Start End Superfamily
3cprA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9564 4 282 3.20.20.70
1xl9D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9548 3 277 3.20.20.70
2yxgD00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9547 5 281 3.20.20.70
3pb2D00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9534 5 282 3.20.20.70
3a5fA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9532 5 281 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A838ACU4-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7) 0.9863 5 282 GO:0005829
GO:0008840
GO:0009089
GO:0019877
AF-A0A6H1R647-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7) 0.9856 3 280 GO:0005829
GO:0008840
GO:0009089
GO:0019877
AF-A0A841NQ62-F1-model_v4 deleted 0.9855 3 282
AF-A0A2H6B5G3-F1-model_v4 4-hydroxy-tetrahydrodipicolinate synthase (HTPA synthase) (EC 4.3.3.7) 0.9844 3 283 GO:0005829
GO:0008840
GO:0009089
GO:0019877
AF-A0A841NQ62-F1-model_v4 deleted 0.982 3 282

Map