F227233

General Info

Members Datasets Scaffolds Average Seq Length
157 129 314 459

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10023590|Ga0105239_100235903
Length 500
Sequence MLVTVVQVTERATMNRRAIARNAEQEETMTNLTYITLNGASADLEPLAVSQFAGHLKGKLITAADSDYDTARAVHNGMIDRRPALIAQCDGVDDVVACVNFARERSIRLSVRGGGHSAPGLGVCDGGLVIDLASFKSISVDPAGRTAWVGGGCTWGEVDQATHPHGLAVPCGIIASTGVGGLTLGGGHGYLTRKYGLTIDNLLAAKMVLADGSQVTASQEENPDLFWAIRGGGGNFGVVTSFQFRCHPVSTVVAGPTFWEMEKAGDVMRWYRDFIRTAPEELAGFFAFLVVPPGPPFPEALHLKQVCGVVWCYSGPEAQAEAIFKPVGEFMQPLLHGVGAMPLPAFQSAFDPLYPKGLQWYWKGDFFRELTDEAIAAHLRHGTKLPTMLSSMHLYPIDGAPNRVGSSETAFSHRDAAFSEVIIGVDPDPANTELVTNWARSYWEDLHPHSSGGAYVNFMIDEGQERVKATYRGNYDRLTQVKAKYDPDNLFRVNQNIAPK

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
3 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
36 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
37 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
56 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
57 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
59 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
85 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
87 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
88 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
89 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
90 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
100 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
101 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
102 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
103 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
104 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
105 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
106 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
107 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
108 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
112 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
113 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
114 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
115 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
116 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
117 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
121 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
122 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
123 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
124 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
125 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
126 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
127 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
128 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
129 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.27
Metatranscriptomes 4.46
Isolates 1.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.27
Nodule 0
Rhizoplane 2.55
Rhizosphere 95.54
Stem 0
Stem Tuber 0
Unclassified 6.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10023590 3300010375 Bacteria 6775
2 Ga0006562J51391_1120663 3300003578 Bacteria 3327
3 Ga0058863_11648376 3300004799 Bacteria 1538
4 Ga0058862_12583942 3300004803 Bacteria 1668
5 Ga0070658_10002499 3300005327 Bacteria 15364
6 Ga0070658_10070290 3300005327 Bacteria 2865
7 Ga0070683_100078448 3300005329 Bacteria 3090
8 Ga0070670_100021294 3300005331 Bacteria 5578
9 Ga0070680_100045918 3300005336 Bacteria 3553
10 Ga0070682_100006776 3300005337 Bacteria 6427
11 Ga0070660_100004601 3300005339 Bacteria 9543
12 Ga0070661_100006985 3300005344 Bacteria 7793
13 Ga0070671_100008449 3300005355 Bacteria 8253
14 Ga0070674_100002002 3300005356 Bacteria 11153
15 Ga0070674_100099569 3300005356 Bacteria 2115
16 Ga0070714_100007557 3300005435 Bacteria 8461
17 Ga0070714_100029081 3300005435 Bacteria 4591
18 Ga0070710_10093744 3300005437 Bacteria 1775
19 Ga0070711_100011477 3300005439 Bacteria 5504
20 Ga0070708_100042644 3300005445 Bacteria 3984
21 Ga0070662_100067727 3300005457 Bacteria 2622
22 Ga0070681_10015713 3300005458 Bacteria 7544
23 Ga0070681_10036006 3300005458 Bacteria 4972
24 Ga0070706_100050301 3300005467 Bacteria 3845
25 Ga0070707_100115692 3300005468 Bacteria 2603
26 Ga0070698_100044370 3300005471 Bacteria 4553
27 Ga0070698_100071486 3300005471 Bacteria 3479
28 Ga0070699_100151912 3300005518 Bacteria 2048
29 Ga0070679_100064711 3300005530 Bacteria 3644
30 Ga0070697_100043737 3300005536 Unclassified 3627
31 Ga0068853_100100763 3300005539 Bacteria 2554
32 Ga0070704_100177943 3300005549 Bacteria 1699
33 Ga0068855_100030412 3300005563 Bacteria 6460
34 Ga0068855_100042784 3300005563 Bacteria 5366
35 Ga0070664_100095297 3300005564 Bacteria 2581
36 Ga0068857_100036634 3300005577 Bacteria 4347
37 Ga0070702_100000693 3300005615 Bacteria 12683
38 Ga0068852_100004142 3300005616 Bacteria 10215
39 Ga0068858_100056493 3300005842 Unclassified 3628
40 Ga0081538_10015447 3300005981 Bacteria 5906
41 Ga0070717_10008599 3300006028 Bacteria 7627
42 Ga0070717_10018736 3300006028 Bacteria 5413
43 Ga0070717_10134080 3300006028 Bacteria 2131
44 Ga0070715_10063058 3300006163 Bacteria 1633
45 Ga0070712_100004982 3300006175 Bacteria 8218
46 Ga0097621_100001475 3300006237 Bacteria 16109
47 Ga0097621_100041315 3300006237 Bacteria 3712
48 Ga0068871_100046438 3300006358 Unclassified 3498
49 Ga0075433_10002365 3300006852 Bacteria 14336
50 Ga0075434_100000516 3300006871 Bacteria 29363
51 Ga0075436_100010242 3300006914 Bacteria 6419
52 Ga0075435_100013799 3300007076 Bacteria 6022
53 Ga0105240_10026059 3300009093 Bacteria 7676
54 Ga0105245_10003783 3300009098 Bacteria 13463
55 Ga0105243_10017581 3300009148 Bacteria 5408
56 Ga0105243_10098802 3300009148 Bacteria 2419
57 Ga0105248_10066829 3300009177 Bacteria 4036
58 Ga0105248_10067361 3300009177 Bacteria 4020
59 Ga0105237_10000913 3300009545 Bacteria 39690
60 Ga0105238_10016116 3300009551 Bacteria 7559
61 Ga0105239_10000026 3300010375 Bacteria 248302
62 Ga0157373_10073847 3300013100 Bacteria 2406
63 Ga0157369_10019126 3300013105 Bacteria 7667
64 Ga0157378_10002256 3300013297 Bacteria 17126
65 Ga0157378_10004153 3300013297 Bacteria 12792
66 Ga0163162_10000052 3300013306 Bacteria 112651
67 Ga0163162_10094020 3300013306 Unclassified 3084
68 Ga0157375_10109734 3300013308 Bacteria 2855
69 Ga0157379_10047431 3300014968 Bacteria 3833
70 Ga0197907_11035783 3300020069 Bacteria 1865
71 Ga0206356_11107297 3300020070 Bacteria 1766
72 Ga0206355_1018773 3300020076 Bacteria 1804
73 Ga0206352_10857506 3300020078 Bacteria 1763
74 Ga0207688_10041711 3300025901 Bacteria 2554
75 Ga0207705_10005204 3300025909 Bacteria 9752
76 Ga0207705_10160531 3300025909 Bacteria 1688
77 Ga0207684_10223811 3300025910 Unclassified 1624
78 Ga0207707_10011223 3300025912 Bacteria 7795
79 Ga0207707_10031319 3300025912 Unclassified 4654
80 Ga0207707_10050134 3300025912 Bacteria 3637
81 Ga0207695_10020448 3300025913 Bacteria 7580
82 Ga0207671_10000134 3300025914 Bacteria 113822
83 Ga0207693_10008960 3300025915 Bacteria 8165
84 Ga0207663_10001710 3300025916 Bacteria 10308
85 Ga0207663_10066161 3300025916 Bacteria 2313
86 Ga0207657_10001080 3300025919 Bacteria 28910
87 Ga0207652_10174844 3300025921 Bacteria 1928
88 Ga0207687_10070081 3300025927 Bacteria 2502
89 Ga0207687_10131888 3300025927 Unclassified 1885
90 Ga0207700_10041798 3300025928 Unclassified 3356
91 Ga0207700_10234512 3300025928 Bacteria 1562
92 Ga0207664_10006349 3300025929 Bacteria 8124
93 Ga0207644_10072648 3300025931 Bacteria 2520
94 Ga0207706_10001412 3300025933 Bacteria 24037
95 Ga0207709_10012033 3300025935 Bacteria 4772
96 Ga0207709_10101566 3300025935 Bacteria 1902
97 Ga0207669_10003029 3300025937 Bacteria 7233
98 Ga0207669_10150859 3300025937 Bacteria 1628
99 Ga0207665_10051380 3300025939 Plasmid 2774
100 Ga0207691_10183725 3300025940 Bacteria 1826
101 Ga0207711_10213320 3300025941 Bacteria 1764
102 Ga0207667_10037663 3300025949 Bacteria 5169
103 Ga0207648_10186126 3300026089 Unclassified 1839
104 Ga0207674_10019817 3300026116 Bacteria 7279
105 Ga0207683_10124885 3300026121 Bacteria 2312
106 Ga0207428_10002949 3300027907 Bacteria 16836
107 Ga0268266_10000030 3300028379 Bacteria 417120
108 Ga0265320_10056407 3300031240 Bacteria 1887
109 Ga0265316_10000520 3300031344 Bacteria 43462
110 Ga0265314_10045119 3300031711 Bacteria 3118
111 Ga0265314_10087397 3300031711 Bacteria 2038
112 Ga0265342_10015826 3300031712 Bacteria 4950
113 Ga0316576_10074553 3300031727 Bacteria 2509
114 Ga0307413_10112882 3300031824 Bacteria 1823
115 Ga0307416_100065454 3300032002 Bacteria 2987
116 Ga0307416_100082186 3300032002 Bacteria 2728
117 Ga0373953_0068877 3300035117 Bacteria 1457
118 Ga0373937_0007584 3300036401 Bacteria 9397
119 Ga0316584_0003623 3300036712 Bacteria 10110
120 Ga0395900_0119505 3300037418 Bacteria 2705
121 Ga0395898_0002672 3300037466 Bacteria 20661
122 Ga0395901_0191563 3300038443 Bacteria 2144
123 Ga0466972_0060182 3300044658 Bacteria 1822
124 Ga0466961_0164403 3300044693 Bacteria 1382
125 Ga0466963_0002701 3300044694 Bacteria 9998
126 Ga0466963_0010477 3300044694 Bacteria 5612
127 Ga0466963_0053392 3300044694 Bacteria 2683
128 Ga0466959_0006286 3300045049 Bacteria 8209
129 Ga0466958_0013098 3300045836 Bacteria 4713
130 Ga0466958_0086420 3300045836 Bacteria 1935
131 Ga0466967_0019032 3300045976 Bacteria 5511
132 Ga0466967_0049785 3300045976 Bacteria 3666
133 Ga0495596_0014953 3300046500 Bacteria 3261
134 Ga0495672_0058548 3300047320 Bacteria 2233
135 Ga0496102_0121484 3300048905 Bacteria 2440
136 Ga0496104_0185947 3300048907 Bacteria 1988
137 Ga0496108_0110335 3300048911 Bacteria 2352
138 Ga0496115_0000430 3300048918 Bacteria 33998
139 Ga0501067_0098785 3300049583 Bacteria 1621
140 Ga0501071_0005909 3300049587 Bacteria 7917
141 Ga0501072_0102654 3300049588 Bacteria 2273
142 Ga0501073_0009525 3300049589 Bacteria 7169
143 Ga0501074_0006634 3300049590 Bacteria 8366
144 Ga0501080_0055479 3300049742 Bacteria 3690
145 Ga0501081_0095323 3300049743 Bacteria 2098
146 Ga0501035_0030436 3300049822 Bacteria 4921
147 Ga0501044_0012888 3300049823 Bacteria 9050
148 Ga0501045_0093807 3300049824 Unclassified 2220
149 nmdc:mga09592_76701_c1 3300050508 Bacteria 2843
150 nmdc:mga08y16_6027_c1 3300050511 Bacteria 12706
151 nmdc:mga0rr50_64177_c1 3300050513 Bacteria 2777
152 nmdc:mga08x19_8087_c1 3300050514 Bacteria 6250
153 nmdc:mga0a205_17742_c1 3300050515 Bacteria 6680
154 Ga0500556_0000061 3300053104 Bacteria 111417
155 Ga0500616_0000611 3300053153 Bacteria 43306
156 2910249513 2910245624 Bacteria 6935613
157 8056830710 8056829672 Bacteria 9045328
158 Ga0105239_10023590
159 Ga0006562J51391_1120663
160 Ga0058863_11648376
161 Ga0058862_12583942
162 Ga0070658_10002499
163 Ga0070658_10070290
164 Ga0070683_100078448
165 Ga0070670_100021294
166 Ga0070680_100045918
167 Ga0070682_100006776
168 Ga0070660_100004601
169 Ga0070661_100006985
170 Ga0070671_100008449
171 Ga0070674_100002002
172 Ga0070674_100099569
173 Ga0070714_100007557
174 Ga0070714_100029081
175 Ga0070710_10093744
176 Ga0070711_100011477
177 Ga0070708_100042644
178 Ga0070662_100067727
179 Ga0070681_10015713
180 Ga0070681_10036006
181 Ga0070706_100050301
182 Ga0070707_100115692
183 Ga0070698_100044370
184 Ga0070698_100071486
185 Ga0070699_100151912
186 Ga0070679_100064711
187 Ga0070697_100043737
188 Ga0068853_100100763
189 Ga0070704_100177943
190 Ga0068855_100030412
191 Ga0068855_100042784
192 Ga0070664_100095297
193 Ga0068857_100036634
194 Ga0070702_100000693
195 Ga0068852_100004142
196 Ga0068858_100056493
197 Ga0081538_10015447
198 Ga0070717_10008599
199 Ga0070717_10018736
200 Ga0070717_10134080
201 Ga0070715_10063058
202 Ga0070712_100004982
203 Ga0097621_100001475
204 Ga0097621_100041315
205 Ga0068871_100046438
206 Ga0075433_10002365
207 Ga0075434_100000516
208 Ga0075436_100010242
209 Ga0075435_100013799
210 Ga0105240_10026059
211 Ga0105245_10003783
212 Ga0105243_10017581
213 Ga0105243_10098802
214 Ga0105248_10066829
215 Ga0105248_10067361
216 Ga0105237_10000913
217 Ga0105238_10016116
218 Ga0105239_10000026
219 Ga0157373_10073847
220 Ga0157369_10019126
221 Ga0157378_10002256
222 Ga0157378_10004153
223 Ga0163162_10000052
224 Ga0163162_10094020
225 Ga0157375_10109734
226 Ga0157379_10047431
227 Ga0197907_11035783
228 Ga0206356_11107297
229 Ga0206355_1018773
230 Ga0206352_10857506
231 Ga0207688_10041711
232 Ga0207705_10005204
233 Ga0207705_10160531
234 Ga0207684_10223811
235 Ga0207707_10011223
236 Ga0207707_10031319
237 Ga0207707_10050134
238 Ga0207695_10020448
239 Ga0207671_10000134
240 Ga0207693_10008960
241 Ga0207663_10001710
242 Ga0207663_10066161
243 Ga0207657_10001080
244 Ga0207652_10174844
245 Ga0207687_10070081
246 Ga0207687_10131888
247 Ga0207700_10041798
248 Ga0207700_10234512
249 Ga0207664_10006349
250 Ga0207644_10072648
251 Ga0207706_10001412
252 Ga0207709_10012033
253 Ga0207709_10101566
254 Ga0207669_10003029
255 Ga0207669_10150859
256 Ga0207665_10051380
257 Ga0207691_10183725
258 Ga0207711_10213320
259 Ga0207667_10037663
260 Ga0207648_10186126
261 Ga0207674_10019817
262 Ga0207683_10124885
263 Ga0207428_10002949
264 Ga0268266_10000030
265 Ga0265320_10056407
266 Ga0265316_10000520
267 Ga0265314_10045119
268 Ga0265314_10087397
269 Ga0265342_10015826
270 Ga0316576_10074553
271 Ga0307413_10112882
272 Ga0307416_100065454
273 Ga0307416_100082186
274 Ga0373953_0068877
275 Ga0373937_0007584
276 Ga0316584_0003623
277 Ga0395900_0119505
278 Ga0395898_0002672
279 Ga0395901_0191563
280 Ga0466972_0060182
281 Ga0466961_0164403
282 Ga0466963_0002701
283 Ga0466963_0010477
284 Ga0466963_0053392
285 Ga0466959_0006286
286 Ga0466958_0013098
287 Ga0466958_0086420
288 Ga0466967_0019032
289 Ga0466967_0049785
290 Ga0495596_0014953
291 Ga0495672_0058548
292 Ga0496102_0121484
293 Ga0496104_0185947
294 Ga0496108_0110335
295 Ga0496115_0000430
296 Ga0501067_0098785
297 Ga0501071_0005909
298 Ga0501072_0102654
299 Ga0501073_0009525
300 Ga0501074_0006634
301 Ga0501080_0055479
302 Ga0501081_0095323
303 Ga0501035_0030436
304 Ga0501044_0012888
305 Ga0501045_0093807
306 nmdc:mga09592_76701_c1
307 nmdc:mga08y16_6027_c1
308 nmdc:mga0rr50_64177_c1
309 nmdc:mga08x19_8087_c1
310 nmdc:mga0a205_17742_c1
311 Ga0500556_0000061
312 Ga0500616_0000611
313 2910249513
314 8056830710

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08031

BBE

Berberine and berberine like

454

498

0.98

PF01565

FAD_binding_4

FAD binding domain

83

218

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fye-assembly1.cif.gz_B-2 the crystal structure of encm h138t mutant 0.9198 5 438
6fyb-assembly1.cif.gz_A the crystal structure of encm l144m mutant 0.9198 5 438
6fyf-assembly3.cif.gz_C the crystal structure of encm v135m mutant 0.9196 5 437
6fyd-assembly1.cif.gz_D the crystal structure of encm t139v mutant 0.9179 5 437
6fyc-assembly1.cif.gz_B-2 the crystal structure of encm l144m mutant complex with dioxygen under 15 bars o2 pressure 0.9127 5 438
ID Description Score Start End Superfamily
3w8xA02 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9458 97 183 3.30.465.10
2bvfB02 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9379 97 184 3.30.465.10
af_Q869M2_98_203_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9334 105 184 3.30.465.10
3w8wB01 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 0.9105 18 96 3.30.43.10
af_P58710_75_198_3.30.465.10 Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; 0.9054 99 183 3.30.465.10
ID Description Score Start End GO Terms
AF-A0A1Q5KUC5-F1-model_v4 Oxidoreductase 0.9755 4 439 GO:0016491
GO:0071949
AF-A0A1Q5KUC5-F1-model_v4 Oxidoreductase 0.9667 4 439 GO:0016491
GO:0071949
AF-A0A1B9DCG8-F1-model_v4 Oxidoreductase 0.957 7 439 GO:0016491
GO:0071949
AF-A0A2V6JXD4-F1-model_v4 Oxidoreductase 0.9566 216 438 GO:0016491
GO:0050660
AF-A0A3A0ACT7-F1-model_v4 Oxidoreductase 0.9542 156 437 GO:0016491
GO:0050660

Map