F226740
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 157 | 106 | 314 | 430 |
Family's Representative Sequence
| Representative Sequence | 3300005530|Ga0070679_100178348|Ga0070679_1001783482 |
| Length | 465 |
| Sequence | METMTWQNWAGTASADPVRRAWPRSTEEIANAITAAATDGLTVRALGSGHSFTPAAATSGVALDLSGWAGVIAADLDSGLITVRSGTTIRDLNAVLDTLGLAMANLGDIDAQTLSGAISTGTHGTGAGLGGIATQVTGLELVLGDGSVVSCSAKERPDLFSAACVSVGALGVLSTVTLQCVPAFTLAADERPMPLGEVLDRFGEFAAGNDHFEFYWFPYGKNALVKRNNRLTAGDGPAGLRARWQKAPFYRARNPALSRGGLVSQYPPPMPGWRRFLEYEVMENAAFGALCRTGRAMPSTIKPLNRFAAATLSKRTYSAPSHEVFVTPRRVRFVESEYAVPRESLLDVLAELRTGVARLAHPVMFPVEVRVAAADNIWLSTAHGRDSAYVAIHQYVGLPYADYFKLFESIATSVGGRPHWGKMHTRDAAYLGQVYPRFADFLRVRDETDPGRRFANPYLTQVFGD |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 2 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 4 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 5 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 7 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 9 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 12 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 13 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 14 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 15 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 16 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 20 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 21 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 22 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 23 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 24 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 25 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 26 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 27 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 28 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 40 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 41 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 42 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 43 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 44 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 45 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 46 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 47 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 48 | 3300035119 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 | Metagenome | Rhizosphere |
| 49 | 3300035120 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 | Metagenome | Rhizosphere |
| 50 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 51 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 52 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 53 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 54 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 55 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 56 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 57 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 58 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 59 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 60 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 61 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 62 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 63 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 64 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 65 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 66 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 67 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 68 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 69 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 70 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 71 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 72 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300046642 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 85 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 88 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 89 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 90 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 91 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 92 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 93 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 94 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 95 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 96 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 97 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 99 | 2738543005 | Rhodococcus sp. OK519 | Isolate | Unclassified |
| 100 | 2738543011 | Rhodococcus sp. OK611 | Isolate | Unclassified |
| 101 | 2795385470 | Labedaea rhizosphaerae DSM 45361 | Isolate | Rhizosphere |
| 102 | 2866552031 | Saccharopolyspora rhizosphaerae H219 | Isolate | Unclassified |
| 103 | 2887478801 | Catellatospora paridis NEAU-CL2 | Isolate | Rhizosphere |
| 104 | 2889300758 | Rhodococcus sp. PvR099 | Isolate | Rhizosphere |
| 105 | 2939743619 | Rhodococcus sp. PvR044 | Isolate | Rhizosphere |
| 106 | 8002811521 | Leucobacter chinensis NC76-1 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 94.27 |
| Metatranscriptomes | 0.64 |
| Isolates | 5.1 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 0 |
| Nodule | 0 |
| Rhizoplane | 1.91 |
| Rhizosphere | 92.36 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070679_100178348 | 3300005530 | Bacteria | 2097 |
| 2 | Ga0070658_10028615 | 3300005327 | Bacteria | 4475 |
| 3 | Ga0070683_100017156 | 3300005329 | Bacteria | 6394 |
| 4 | Ga0070680_100019171 | 3300005336 | Bacteria | 5419 |
| 5 | Ga0070660_100150374 | 3300005339 | Bacteria | 1872 |
| 6 | Ga0070709_10042313 | 3300005434 | Bacteria | 2812 |
| 7 | Ga0070714_100000010 | 3300005435 | Bacteria | 262871 |
| 8 | Ga0070714_100003304 | 3300005435 | Bacteria | 12024 |
| 9 | Ga0070714_100125759 | 3300005435 | Bacteria | 2285 |
| 10 | Ga0070713_100012694 | 3300005436 | Bacteria | 6190 |
| 11 | Ga0070713_100032366 | 3300005436 | Bacteria | 4176 |
| 12 | Ga0070713_100066511 | 3300005436 | Bacteria | 3031 |
| 13 | Ga0070711_100143567 | 3300005439 | Bacteria | 1792 |
| 14 | Ga0070663_100016922 | 3300005455 | Bacteria | 4746 |
| 15 | Ga0070681_10012834 | 3300005458 | Bacteria | 8317 |
| 16 | Ga0070679_100017588 | 3300005530 | Bacteria | 6920 |
| 17 | Ga0070684_100002641 | 3300005535 | Bacteria | 13236 |
| 18 | Ga0068857_100113386 | 3300005577 | Bacteria | 2437 |
| 19 | Ga0068856_100017828 | 3300005614 | Bacteria | 6886 |
| 20 | Ga0081455_10003863 | 3300005937 | Bacteria | 17077 |
| 21 | Ga0070717_10004394 | 3300006028 | Bacteria | 10174 |
| 22 | Ga0105245_10046006 | 3300009098 | Bacteria | 3899 |
| 23 | Ga0105245_10271256 | 3300009098 | Bacteria | 1655 |
| 24 | Ga0105243_10005534 | 3300009148 | Bacteria | 9846 |
| 25 | Ga0105237_10304208 | 3300009545 | Bacteria | 1597 |
| 26 | Ga0105238_10114201 | 3300009551 | Bacteria | 2680 |
| 27 | Ga0105238_10143321 | 3300009551 | Bacteria | 2366 |
| 28 | Ga0157370_10023707 | 3300013104 | Bacteria | 6090 |
| 29 | Ga0157369_10035692 | 3300013105 | Bacteria | 5450 |
| 30 | Ga0157369_10064688 | 3300013105 | Bacteria | 3938 |
| 31 | Ga0157372_10000043 | 3300013307 | Bacteria | 153958 |
| 32 | Ga0213875_10000158 | 3300021388 | Bacteria | 71389 |
| 33 | Ga0213875_10000555 | 3300021388 | Bacteria | 30558 |
| 34 | Ga0224712_10023751 | 3300022467 | Bacteria | 2132 |
| 35 | Ga0207699_10064661 | 3300025906 | Bacteria | 2214 |
| 36 | Ga0207707_10004192 | 3300025912 | Bacteria | 12769 |
| 37 | Ga0207693_10036172 | 3300025915 | Bacteria | 3892 |
| 38 | Ga0207693_10071968 | 3300025915 | Bacteria | 2707 |
| 39 | Ga0207657_10039845 | 3300025919 | Bacteria | 4169 |
| 40 | Ga0207657_10185135 | 3300025919 | Bacteria | 1682 |
| 41 | Ga0207652_10035539 | 3300025921 | Bacteria | 4206 |
| 42 | Ga0207694_10013288 | 3300025924 | Bacteria | 6200 |
| 43 | Ga0207687_10010020 | 3300025927 | Bacteria | 6199 |
| 44 | Ga0207687_10077661 | 3300025927 | Bacteria | 2388 |
| 45 | Ga0207700_10000549 | 3300025928 | Bacteria | 22010 |
| 46 | Ga0207664_10000009 | 3300025929 | Bacteria | 299246 |
| 47 | Ga0207664_10001387 | 3300025929 | Bacteria | 15911 |
| 48 | Ga0207664_10137224 | 3300025929 | Bacteria | 2065 |
| 49 | Ga0207661_10047574 | 3300025944 | Bacteria | 3406 |
| 50 | Ga0207667_10018939 | 3300025949 | Bacteria | 7699 |
| 51 | Ga0207678_10019925 | 3300026067 | Bacteria | 5895 |
| 52 | Ga0207674_10041931 | 3300026116 | Bacteria | 4730 |
| 53 | Ga0265338_10019137 | 3300028800 | Bacteria | 7287 |
| 54 | Ga0307513_10002659 | 3300031456 | Bacteria | 24628 |
| 55 | Ga0316575_10000339 | 3300031665 | Bacteria | 13160 |
| 56 | Ga0316579_10000580 | 3300031691 | Bacteria | 12249 |
| 57 | Ga0316576_10040005 | 3300031727 | Bacteria | 3367 |
| 58 | Ga0307413_10133311 | 3300031824 | Bacteria | 1704 |
| 59 | Ga0307409_100017444 | 3300031995 | Bacteria | 4786 |
| 60 | Ga0373934_0003632 | 3300035086 | Bacteria | 5668 |
| 61 | Ga0373936_0011290 | 3300035113 | Bacteria | 3379 |
| 62 | Ga0373956_0038512 | 3300035119 | Bacteria | 2115 |
| 63 | Ga0373957_0006985 | 3300035120 | Bacteria | 3588 |
| 64 | Ga0373955_0021275 | 3300035172 | Bacteria | 3272 |
| 65 | Ga0373955_0025643 | 3300035172 | Bacteria | 3030 |
| 66 | Ga0373955_0026067 | 3300035172 | Bacteria | 3007 |
| 67 | Ga0316574_0053939 | 3300035398 | Bacteria | 2510 |
| 68 | Ga0373931_0132755 | 3300035691 | Bacteria | 1435 |
| 69 | Ga0373933_0059300 | 3300035724 | Bacteria | 2304 |
| 70 | Ga0373933_0079217 | 3300035724 | Bacteria | 2011 |
| 71 | Ga0373937_0225891 | 3300036401 | Bacteria | 1762 |
| 72 | Ga0316582_0000977 | 3300036647 | Bacteria | 11882 |
| 73 | Ga0316584_0000908 | 3300036712 | Bacteria | 16880 |
| 74 | Ga0373925_0000319 | 3300037068 | Bacteria | 50232 |
| 75 | Ga0395898_0092335 | 3300037466 | Bacteria | 2911 |
| 76 | Ga0436364_0447270 | 3300037853 | Bacteria | 2024 |
| 77 | Ga0436364_0667270 | 3300037853 | Bacteria | 158868 |
| 78 | Ga0436364_0908146 | 3300037853 | Bacteria | 44433 |
| 79 | Ga0466966_0013205 | 3300044684 | Bacteria | 5470 |
| 80 | Ga0466966_0043946 | 3300044684 | Bacteria | 2862 |
| 81 | Ga0466966_0073102 | 3300044684 | Bacteria | 2145 |
| 82 | Ga0466966_0089364 | 3300044684 | Bacteria | 1914 |
| 83 | Ga0466961_0002704 | 3300044693 | Bacteria | 11012 |
| 84 | Ga0466961_0018467 | 3300044693 | Bacteria | 4485 |
| 85 | Ga0466961_0064102 | 3300044693 | Bacteria | 2335 |
| 86 | Ga0466961_0072078 | 3300044693 | Bacteria | 2191 |
| 87 | Ga0466961_0122917 | 3300044693 | Bacteria | 1629 |
| 88 | Ga0466963_0005443 | 3300044694 | Bacteria | 7457 |
| 89 | Ga0466963_0014513 | 3300044694 | Bacteria | 4859 |
| 90 | Ga0466963_0026009 | 3300044694 | Bacteria | 3740 |
| 91 | Ga0466963_0033762 | 3300044694 | Bacteria | 3325 |
| 92 | Ga0466963_0038832 | 3300044694 | Bacteria | 3115 |
| 93 | Ga0466963_0043274 | 3300044694 | Bacteria | 2960 |
| 94 | Ga0466963_0059482 | 3300044694 | Bacteria | 2550 |
| 95 | Ga0466964_0025627 | 3300044706 | Bacteria | 2304 |
| 96 | Ga0466971_0005104 | 3300044719 | Bacteria | 5685 |
| 97 | Ga0466971_0021181 | 3300044719 | Bacteria | 2892 |
| 98 | Ga0466971_0073002 | 3300044719 | Bacteria | 1559 |
| 99 | Ga0466968_0020610 | 3300044735 | Bacteria | 2663 |
| 100 | Ga0466970_0028832 | 3300044765 | Bacteria | 2919 |
| 101 | Ga0466970_0079824 | 3300044765 | Bacteria | 1767 |
| 102 | Ga0466957_0041145 | 3300044842 | Bacteria | 2794 |
| 103 | Ga0466957_0082680 | 3300044842 | Bacteria | 2002 |
| 104 | Ga0466957_0113935 | 3300044842 | Bacteria | 1717 |
| 105 | Ga0466960_0046957 | 3300044901 | Bacteria | 2069 |
| 106 | Ga0466960_0094220 | 3300044901 | Bacteria | 1531 |
| 107 | Ga0466959_0099568 | 3300045049 | Bacteria | 2081 |
| 108 | Ga0466958_0007526 | 3300045836 | Bacteria | 5994 |
| 109 | Ga0466967_0000558 | 3300045976 | Bacteria | 18195 |
| 110 | Ga0466967_0003873 | 3300045976 | Bacteria | 9918 |
| 111 | Ga0466967_0018224 | 3300045976 | Bacteria | 5603 |
| 112 | Ga0466967_0056461 | 3300045976 | Bacteria | 3462 |
| 113 | Ga0466967_0079763 | 3300045976 | Bacteria | 2952 |
| 114 | Ga0466967_0085002 | 3300045976 | Bacteria | 2864 |
| 115 | Ga0466967_0116571 | 3300045976 | Bacteria | 2461 |
| 116 | Ga0495653_0046260 | 3300046463 | Bacteria | 3370 |
| 117 | Ga0495664_0039447 | 3300046477 | Bacteria | 2790 |
| 118 | Ga0495630_0207522 | 3300046517 | Bacteria | 1495 |
| 119 | Ga0495652_0120594 | 3300046529 | Bacteria | 2092 |
| 120 | Ga0495640_0038159 | 3300046533 | Bacteria | 3380 |
| 121 | Ga0495586_0024142 | 3300046535 | Bacteria | 3248 |
| 122 | Ga0495587_0110105 | 3300046536 | Bacteria | 1582 |
| 123 | Ga0495667_0015028 | 3300046559 | Bacteria | 5226 |
| 124 | Ga0495667_0016367 | 3300046559 | Bacteria | 5011 |
| 125 | Ga0495634_0065311 | 3300046642 | Bacteria | 2412 |
| 126 | Ga0495635_0039672 | 3300046663 | Bacteria | 3256 |
| 127 | Ga0495657_0033640 | 3300046675 | Bacteria | 3567 |
| 128 | Ga0495600_0036046 | 3300046809 | Bacteria | 3214 |
| 129 | Ga0495600_0044779 | 3300046809 | Bacteria | 2886 |
| 130 | Ga0495680_0013495 | 3300047322 | Bacteria | 7126 |
| 131 | Ga0495680_0109572 | 3300047322 | Bacteria | 2047 |
| 132 | Ga0495684_0013589 | 3300047471 | Bacteria | 6269 |
| 133 | Ga0495684_0048490 | 3300047471 | Bacteria | 3247 |
| 134 | Ga0495602_0033736 | 3300048088 | Bacteria | 4797 |
| 135 | Ga0496102_0000958 | 3300048905 | Bacteria | 27169 |
| 136 | Ga0496109_0148096 | 3300048912 | Bacteria | 2197 |
| 137 | Ga0496109_0151772 | 3300048912 | Bacteria | 2169 |
| 138 | Ga0501032_0025041 | 3300049569 | Bacteria | 4115 |
| 139 | Ga0501033_0041966 | 3300049570 | Bacteria | 3412 |
| 140 | Ga0501038_0002761 | 3300049574 | Bacteria | 16352 |
| 141 | Ga0501047_0002285 | 3300049581 | Bacteria | 18329 |
| 142 | Ga0501048_0000055 | 3300049582 | Bacteria | 56696 |
| 143 | Ga0501070_0130981 | 3300049586 | Bacteria | 2072 |
| 144 | Ga0501035_0041319 | 3300049822 | Bacteria | 4164 |
| 145 | Ga0501035_0155522 | 3300049822 | Bacteria | 1982 |
| 146 | Ga0501044_0032423 | 3300049823 | Bacteria | 5493 |
| 147 | Ga0495619_0159655 | 3300053085 | Bacteria | 1557 |
| 148 | Ga0466962_0015523 | 3300061719 | Bacteria | 3673 |
| 149 | Ga0466962_0017345 | 3300061719 | Bacteria | 3467 |
| 150 | 2739203864 | 2738543005 | Bacteria | 5278128 |
| 151 | 2739238486 | 2738543011 | Bacteria | 5731169 |
| 152 | 2795780818 | 2795385470 | Bacteria | 8317180 |
| 153 | 2866554878 | 2866552031 | Bacteria | 5824618 |
| 154 | 2887482958 | 2887478801 | Bacteria | 8972725 |
| 155 | 2889302923 | 2889300758 | Bacteria | 5690814 |
| 156 | 2939746199 | 2939743619 | Bacteria | 5762299 |
| 157 | 8002813787 | 8002811521 | Bacteria | 2942897 |
| 158 | Ga0070679_100178348 | |||
| 159 | Ga0070658_10028615 | |||
| 160 | Ga0070683_100017156 | |||
| 161 | Ga0070680_100019171 | |||
| 162 | Ga0070660_100150374 | |||
| 163 | Ga0070709_10042313 | |||
| 164 | Ga0070714_100000010 | |||
| 165 | Ga0070714_100003304 | |||
| 166 | Ga0070714_100125759 | |||
| 167 | Ga0070713_100012694 | |||
| 168 | Ga0070713_100032366 | |||
| 169 | Ga0070713_100066511 | |||
| 170 | Ga0070711_100143567 | |||
| 171 | Ga0070663_100016922 | |||
| 172 | Ga0070681_10012834 | |||
| 173 | Ga0070679_100017588 | |||
| 174 | Ga0070684_100002641 | |||
| 175 | Ga0068857_100113386 | |||
| 176 | Ga0068856_100017828 | |||
| 177 | Ga0081455_10003863 | |||
| 178 | Ga0070717_10004394 | |||
| 179 | Ga0105245_10046006 | |||
| 180 | Ga0105245_10271256 | |||
| 181 | Ga0105243_10005534 | |||
| 182 | Ga0105237_10304208 | |||
| 183 | Ga0105238_10114201 | |||
| 184 | Ga0105238_10143321 | |||
| 185 | Ga0157370_10023707 | |||
| 186 | Ga0157369_10035692 | |||
| 187 | Ga0157369_10064688 | |||
| 188 | Ga0157372_10000043 | |||
| 189 | Ga0213875_10000158 | |||
| 190 | Ga0213875_10000555 | |||
| 191 | Ga0224712_10023751 | |||
| 192 | Ga0207699_10064661 | |||
| 193 | Ga0207707_10004192 | |||
| 194 | Ga0207693_10036172 | |||
| 195 | Ga0207693_10071968 | |||
| 196 | Ga0207657_10039845 | |||
| 197 | Ga0207657_10185135 | |||
| 198 | Ga0207652_10035539 | |||
| 199 | Ga0207694_10013288 | |||
| 200 | Ga0207687_10010020 | |||
| 201 | Ga0207687_10077661 | |||
| 202 | Ga0207700_10000549 | |||
| 203 | Ga0207664_10000009 | |||
| 204 | Ga0207664_10001387 | |||
| 205 | Ga0207664_10137224 | |||
| 206 | Ga0207661_10047574 | |||
| 207 | Ga0207667_10018939 | |||
| 208 | Ga0207678_10019925 | |||
| 209 | Ga0207674_10041931 | |||
| 210 | Ga0265338_10019137 | |||
| 211 | Ga0307513_10002659 | |||
| 212 | Ga0316575_10000339 | |||
| 213 | Ga0316579_10000580 | |||
| 214 | Ga0316576_10040005 | |||
| 215 | Ga0307413_10133311 | |||
| 216 | Ga0307409_100017444 | |||
| 217 | Ga0373934_0003632 | |||
| 218 | Ga0373936_0011290 | |||
| 219 | Ga0373956_0038512 | |||
| 220 | Ga0373957_0006985 | |||
| 221 | Ga0373955_0021275 | |||
| 222 | Ga0373955_0025643 | |||
| 223 | Ga0373955_0026067 | |||
| 224 | Ga0316574_0053939 | |||
| 225 | Ga0373931_0132755 | |||
| 226 | Ga0373933_0059300 | |||
| 227 | Ga0373933_0079217 | |||
| 228 | Ga0373937_0225891 | |||
| 229 | Ga0316582_0000977 | |||
| 230 | Ga0316584_0000908 | |||
| 231 | Ga0373925_0000319 | |||
| 232 | Ga0395898_0092335 | |||
| 233 | Ga0436364_0447270 | |||
| 234 | Ga0436364_0667270 | |||
| 235 | Ga0436364_0908146 | |||
| 236 | Ga0466966_0013205 | |||
| 237 | Ga0466966_0043946 | |||
| 238 | Ga0466966_0073102 | |||
| 239 | Ga0466966_0089364 | |||
| 240 | Ga0466961_0002704 | |||
| 241 | Ga0466961_0018467 | |||
| 242 | Ga0466961_0064102 | |||
| 243 | Ga0466961_0072078 | |||
| 244 | Ga0466961_0122917 | |||
| 245 | Ga0466963_0005443 | |||
| 246 | Ga0466963_0014513 | |||
| 247 | Ga0466963_0026009 | |||
| 248 | Ga0466963_0033762 | |||
| 249 | Ga0466963_0038832 | |||
| 250 | Ga0466963_0043274 | |||
| 251 | Ga0466963_0059482 | |||
| 252 | Ga0466964_0025627 | |||
| 253 | Ga0466971_0005104 | |||
| 254 | Ga0466971_0021181 | |||
| 255 | Ga0466971_0073002 | |||
| 256 | Ga0466968_0020610 | |||
| 257 | Ga0466970_0028832 | |||
| 258 | Ga0466970_0079824 | |||
| 259 | Ga0466957_0041145 | |||
| 260 | Ga0466957_0082680 | |||
| 261 | Ga0466957_0113935 | |||
| 262 | Ga0466960_0046957 | |||
| 263 | Ga0466960_0094220 | |||
| 264 | Ga0466959_0099568 | |||
| 265 | Ga0466958_0007526 | |||
| 266 | Ga0466967_0000558 | |||
| 267 | Ga0466967_0003873 | |||
| 268 | Ga0466967_0018224 | |||
| 269 | Ga0466967_0056461 | |||
| 270 | Ga0466967_0079763 | |||
| 271 | Ga0466967_0085002 | |||
| 272 | Ga0466967_0116571 | |||
| 273 | Ga0495653_0046260 | |||
| 274 | Ga0495664_0039447 | |||
| 275 | Ga0495630_0207522 | |||
| 276 | Ga0495652_0120594 | |||
| 277 | Ga0495640_0038159 | |||
| 278 | Ga0495586_0024142 | |||
| 279 | Ga0495587_0110105 | |||
| 280 | Ga0495667_0015028 | |||
| 281 | Ga0495667_0016367 | |||
| 282 | Ga0495634_0065311 | |||
| 283 | Ga0495635_0039672 | |||
| 284 | Ga0495657_0033640 | |||
| 285 | Ga0495600_0036046 | |||
| 286 | Ga0495600_0044779 | |||
| 287 | Ga0495680_0013495 | |||
| 288 | Ga0495680_0109572 | |||
| 289 | Ga0495684_0013589 | |||
| 290 | Ga0495684_0048490 | |||
| 291 | Ga0495602_0033736 | |||
| 292 | Ga0496102_0000958 | |||
| 293 | Ga0496109_0148096 | |||
| 294 | Ga0496109_0151772 | |||
| 295 | Ga0501032_0025041 | |||
| 296 | Ga0501033_0041966 | |||
| 297 | Ga0501038_0002761 | |||
| 298 | Ga0501047_0002285 | |||
| 299 | Ga0501048_0000055 | |||
| 300 | Ga0501070_0130981 | |||
| 301 | Ga0501035_0041319 | |||
| 302 | Ga0501035_0155522 | |||
| 303 | Ga0501044_0032423 | |||
| 304 | Ga0495619_0159655 | |||
| 305 | Ga0466962_0015523 | |||
| 306 | Ga0466962_0017345 | |||
| 307 | 2739203864 | |||
| 308 | 2739238486 | |||
| 309 | 2795780818 | |||
| 310 | 2866554878 | |||
| 311 | 2887482958 | |||
| 312 | 2889302923 | |||
| 313 | 2939746199 | |||
| 314 | 8002813787 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1i19-assembly2.cif.gz_B | crystal structure of cholesterol oxidase from b.sterolicum | 0.8663 | 2 | 430 |
| 2vfs-assembly1.cif.gz_A | alditol oxidase from streptomyces coelicolor a3(2): complex with xylitol | 0.8614 | 2 | 432 |
| 2vfs-assembly1.cif.gz_A | alditol oxidase from streptomyces coelicolor a3(2): complex with xylitol | 0.8595 | 2 | 432 |
| 1i19-assembly2.cif.gz_B | crystal structure of cholesterol oxidase from b.sterolicum | 0.8588 | 2 | 430 |
| 3js8-assembly1.cif.gz_A | solvent-stable cholesterol oxidase | 0.8475 | 2 | 427 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P58710_75_198_3.30.465.10 | Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; | 0.9899 | 68 | 181 | 3.30.465.10 |
| af_P9WIT3_70_193_3.30.465.10 | Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; | 0.9848 | 68 | 179 | 3.30.465.10 |
| af_Q9HDX8_82_207_3.30.465.10 | Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; | 0.9807 | 68 | 181 | 3.30.465.10 |
| af_Q2RAP0_154_280_3.30.465.10 | Alpha Beta;2-Layer Sandwich;Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3; | 0.9769 | 68 | 179 | 3.30.465.10 |
| af_P9WIT3_297_388_3.30.70.2520 | Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; | 0.9764 | 301 | 391 | 3.30.70.2520 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A543CRV4-F1-model_v4 | FAD-linked oxidoreductase | 0.9872 | 3 | 432 |
GO:0003885
GO:0016020 GO:0019853 GO:0071949 GO:0080049 |
| AF-A0A5J5KA71-F1-model_v4 | FAD-binding protein | 0.9856 | 1 | 432 |
GO:0003885
GO:0016020 GO:0019853 GO:0071949 GO:0080049 |
| AF-A0A6J6X8E0-F1-model_v4 | Unannotated protein | 0.9855 | 2 | 432 |
GO:0003885
GO:0016020 GO:0019853 GO:0071949 |
| AF-A0A7T9FMP4-F1-model_v4 | deleted | 0.9839 | 1 | 431 |
|
| AF-A0A6H1RF58-F1-model_v4 | FAD-binding protein | 0.9833 | 2 | 432 |
GO:0003885
GO:0016020 GO:0071949 |