F225978

General Info

Members Datasets Scaffolds Average Seq Length
156 97 312 230

Family's Representative Sequence

Representative Sequence 3300053139|Ga0500568_0007675|Ga0500568_0007675_4312_5025
Length 237
Sequence MSTAPSIVILTGAGISAESGVPTFRDANGLWENHRIEDVASPDGFSRNPALVHRFYNMRRAALSTVHPNPAHQALARLQRDHQGWVTLITQNVDDLHERAGSPEVIHMHGELLKARCAKCDEVRTWRKDLDELMRCEYCRSVGQMRPHIVWFGEMPFHMEDILTALNQAEIFIAIGTSGHVYPAAGFVEVARQAGARTIEVNMDVTAMSDVFQEHRVGKAGEKVPALVEELLGNTRG

Samples

Sample ID Description Type Environment
1 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
4 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
5 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
6 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
7 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
8 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
9 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
10 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
11 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
12 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
13 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
15 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
16 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
17 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
18 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
19 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
20 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
26 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
27 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
28 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
29 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
30 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
31 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
32 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
33 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
34 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
35 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
36 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
37 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
38 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
39 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
40 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
41 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
42 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
43 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
44 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
45 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
46 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
47 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
48 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
49 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
50 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
51 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
52 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
53 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
54 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
55 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
56 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
57 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
58 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
62 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
64 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
65 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
66 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
67 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
68 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
69 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
70 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
71 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
72 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
73 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
74 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
75 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
76 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
77 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
78 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
79 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
80 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
81 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
82 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
83 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
84 2643221561 Nocardioides sp. Root151 Isolate Unclassified
85 2643221576 Nocardioides sp. Root614 Isolate Unclassified
86 2643221590 Nocardioides sp. Root682 Isolate Unclassified
87 2643221604 Nocardioides sp. Root190 Isolate Unclassified
88 2643221617 Nocardioides sp. Root79 Isolate Unclassified
89 2643221620 Nocardioides sp. Root240 Isolate Unclassified
90 2643221696 Nocardioides sp. Root140 Isolate Unclassified
91 2738541305 Nocardioides sp. CF167 Isolate Unclassified
92 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
93 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
94 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
95 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
96 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
97 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 89.74
Metatranscriptomes 1.28
Isolates 8.97

Biome Distribution

Category Percentage (%)
Aerial Root 1.28
Bulb 0
Endosphere 35.9
Nodule 0
Rhizoplane 6.41
Rhizosphere 48.08
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500568_0007675 3300053139 Bacteria 5268
2 LJQas_1002502 3300000549 Bacteria 2543
3 Ga0070667_100013435 3300005367 Bacteria 6769
4 Ga0070707_100056645 3300005468 Bacteria 3760
5 Ga0070698_100010232 3300005471 Bacteria 10016
6 Ga0075365_10003575 3300006038 Bacteria 8039
7 Ga0075365_10071125 3300006038 Bacteria 2341
8 Ga0075365_10126535 3300006038 Bacteria 1766
9 Ga0075365_10193845 3300006038 Bacteria 1422
10 Ga0075365_10232940 3300006038 Bacteria 1293
11 Ga0075365_10392625 3300006038 Bacteria 979
12 Ga0075365_10460128 3300006038 Bacteria 899
13 Ga0075368_10002353 3300006042 Bacteria 6147
14 Ga0075363_100003393 3300006048 Bacteria 6769
15 Ga0075363_100018943 3300006048 Bacteria 3435
16 Ga0075363_100018955 3300006048 Bacteria 3434
17 Ga0075363_100075492 3300006048 Bacteria 1837
18 Ga0075363_100128961 3300006048 Bacteria 1417
19 Ga0075364_10015094 3300006051 Bacteria 4783
20 Ga0075364_10098986 3300006051 Bacteria 1940
21 Ga0075364_10107859 3300006051 Bacteria 1857
22 Ga0075364_10189468 3300006051 Bacteria 1393
23 Ga0075362_10148718 3300006177 Bacteria 1123
24 Ga0075367_10011903 3300006178 Bacteria 4620
25 Ga0075367_10035259 3300006178 Bacteria 2895
26 Ga0075367_10111802 3300006178 Bacteria 1677
27 Ga0075370_10004867 3300006353 Bacteria 6587
28 Ga0075370_10048831 3300006353 Bacteria 2398
29 Ga0075370_10093816 3300006353 Bacteria 1733
30 Ga0111539_10411208 3300009094 Bacteria 1576
31 Ga0157375_10278161 3300013308 Bacteria 1837
32 Ga0157375_10982675 3300013308 Bacteria 985
33 Ga0163163_10592539 3300014325 Bacteria 1172
34 Ga0157380_10294390 3300014326 Bacteria 1492
35 Ga0157377_10390288 3300014745 Bacteria 945
36 Ga0163161_10062459 3300017792 Bacteria 2714
37 Ga0206353_10254089 3300020082 Bacteria 5304
38 Ga0206353_10762955 3300020082 Bacteria 11360
39 Ga0207646_10298444 3300025922 Bacteria 1456
40 Ga0207658_10005925 3300025986 Bacteria 8348
41 Ga0207708_10009775 3300026075 Bacteria 7118
42 Ga0207648_10684938 3300026089 Bacteria 949
43 Ga0207675_100026043 3300026118 Bacteria 5444
44 Ga0207675_100359841 3300026118 Bacteria 1427
45 Ga0209813_10011940 3300027866 Bacteria 2282
46 Ga0307405_10376382 3300031731 Bacteria 1104
47 Ga0307410_10087798 3300031852 Bacteria 2201
48 Ga0307410_10120860 3300031852 Bacteria 1910
49 Ga0307410_10212435 3300031852 Bacteria 1483
50 Ga0307407_10501212 3300031903 Bacteria 890
51 Ga0307409_100065307 3300031995 Bacteria 2863
52 Ga0307409_100603017 3300031995 Bacteria 1085
53 Ga0307411_10493800 3300032005 Bacteria 1033
54 Ga0307415_100419932 3300032126 Bacteria 1147
55 Ga0307415_100568843 3300032126 Bacteria 1003
56 Ga0395900_0011384 3300037418 Bacteria 9104
57 Ga0395900_0073428 3300037418 Bacteria 3517
58 Ga0395900_0108297 3300037418 Bacteria 2855
59 Ga0395898_0992381 3300037466 Bacteria 776
60 Ga0395905_0289424 3300037471 Bacteria 1525
61 Ga0395901_0073630 3300038443 Bacteria 3563
62 Ga0451837_0585478 3300041494 Bacteria 2104
63 Ga0439434_0000731 3300042435 Bacteria 9400
64 Ga0466965_0018040 3300044683 Bacteria 3378
65 Ga0466965_0020241 3300044683 Bacteria 3196
66 Ga0466965_0030793 3300044683 Bacteria 2615
67 Ga0466966_0249124 3300044684 Bacteria 1070
68 Ga0466961_0023543 3300044693 Bacteria 3962
69 Ga0466961_0366906 3300044693 Bacteria 875
70 Ga0466963_0219725 3300044694 Bacteria 1331
71 Ga0466971_0043403 3300044719 Bacteria 2020
72 Ga0466970_0011877 3300044765 Bacteria 4442
73 Ga0466970_0016456 3300044765 Bacteria 3814
74 Ga0466970_0064003 3300044765 Bacteria 1972
75 Ga0466957_0008760 3300044842 Bacteria 5759
76 Ga0466960_0019586 3300044901 Bacteria 2985
77 Ga0466960_0031309 3300044901 Bacteria 2454
78 Ga0466960_0175082 3300044901 Bacteria 1160
79 Ga0466960_0451807 3300044901 Bacteria 747
80 Ga0466958_0004065 3300045836 Bacteria 7675
81 Ga0466967_0162140 3300045976 Bacteria 2099
82 Ga0495674_0382367 3300047319 Bacteria 1139
83 Ga0496101_0020217 3300048904 Bacteria 4553
84 Ga0496101_0283755 3300048904 Bacteria 1294
85 Ga0496102_0115958 3300048905 Bacteria 2499
86 Ga0496104_0016251 3300048907 Bacteria 6756
87 Ga0496105_0002380 3300048908 Bacteria 13627
88 Ga0496106_0057940 3300048909 Bacteria 2931
89 Ga0496106_0395406 3300048909 Bacteria 1111
90 Ga0496107_0046868 3300048910 Bacteria 3111
91 Ga0496110_0269843 3300048913 Bacteria 1549
92 Ga0496114_0009105 3300048917 Bacteria 7870
93 Ga0496124_0047763 3300048927 Bacteria 3660
94 Ga0501031_0015429 3300049568 Bacteria 4961
95 Ga0501031_0249315 3300049568 Bacteria 1154
96 Ga0501033_0341763 3300049570 Bacteria 1049
97 Ga0501039_0018136 3300049575 Bacteria 5402
98 Ga0501041_0135707 3300049577 Bacteria 1533
99 Ga0501042_0200592 3300049578 Bacteria 1439
100 Ga0501068_0283546 3300049584 Bacteria 1059
101 Ga0501071_0026591 3300049587 Bacteria 4063
102 Ga0501072_0092330 3300049588 Bacteria 2404
103 Ga0501072_0241908 3300049588 Bacteria 1437
104 Ga0501075_0182524 3300049591 Bacteria 1601
105 Ga0501077_0245924 3300049593 Bacteria 1137
106 Ga0501079_0242536 3300049741 Bacteria 1408
107 Ga0501080_0358356 3300049742 Bacteria 1316
108 Ga0501045_0051303 3300049824 Bacteria 3011
109 nmdc:mga03n38_150668_c1 3300050490 Bacteria 1170
110 nmdc:mga03n38_203502_c1 3300050490 Bacteria 1026
111 nmdc:mga03n38_237585_c1 3300050490 Bacteria 958
112 nmdc:mga03n38_37167_c1 3300050490 Bacteria 2099
113 nmdc:mga03n38_82568_c1 3300050490 Bacteria 1513
114 nmdc:mga00v17_168232_c1 3300050491 Bacteria 1413
115 nmdc:mga00v17_169878_c1 3300050491 Bacteria 1406
116 nmdc:mga00v17_217969_c1 3300050491 Bacteria 1235
117 nmdc:mga00v17_303499_c1 3300050491 Bacteria 1037
118 nmdc:mga00v17_56653_c1 3300050491 Bacteria 2397
119 nmdc:mga0yw44_1019_c1 3300050492 Bacteria 10726
120 nmdc:mga0yw44_15559_c1 3300050492 Bacteria 4079
121 nmdc:mga0yw44_168417_c1 3300050492 Bacteria 1437
122 nmdc:mga0yw44_169365_c1 3300050492 Bacteria 1433
123 nmdc:mga0yw44_18171_c1 3300050492 Bacteria 3845
124 nmdc:mga0yw44_360593_c1 3300050492 Bacteria 979
125 nmdc:mga0yw44_40928_c1 3300050492 Bacteria 2756
126 nmdc:mga0yw44_81006_c1 3300050492 Bacteria 2035
127 nmdc:mga0yw44_96195_c1 3300050492 Bacteria 1880
128 nmdc:mga0yw44_99595_c1 3300050492 Bacteria 1849
129 nmdc:mga06z11_6338_c1 3300050494 Bacteria 4804
130 nmdc:mga06z11_9571_c1 3300050494 Bacteria 4089
131 nmdc:mga04h51_16285_c1 3300050495 Bacteria 2156
132 nmdc:mga07m45_71661_c1 3300050496 Bacteria 1971
133 nmdc:mga07m45_80521_c1 3300050496 Bacteria 1859
134 nmdc:mga07m45_81270_c1 3300050496 Bacteria 1850
135 nmdc:mga07m45_9799_c1 3300050496 Bacteria 2590
136 nmdc:mga08y16_271344_c1 3300050511 Bacteria 1751
137 Ga0500644_0000113 3300053088 Bacteria 51111
138 Ga0500593_001748 3300053117 Bacteria 7827
139 Ga0500573_0005933 3300053140 Bacteria 6572
140 Ga0501084_0372047 3300054114 Bacteria 1207
141 Ga0466962_0022806 3300061719 Bacteria 3008
142 Ga0530510_0279063 3300061734 Bacteria 1248
143 2643826841 2643221561 Bacteria 4984412
144 2643890719 2643221576 Bacteria 5214352
145 2643959775 2643221590 Bacteria 5214697
146 2644032779 2643221604 Bacteria 5014917
147 2644100754 2643221617 Bacteria 5139111
148 2644117162 2643221620 Bacteria 5134593
149 2644534190 2643221696 Bacteria 5431823
150 2738869633 2738541305 Bacteria 4910150
151 2809227898 2808606447 Bacteria 3572005
152 2812330794 2811994874 Bacteria 5367947
153 2852634655 2852632344 Bacteria 3463163
154 2857482393 2857481737 Bacteria 4761446
155 2984577827 2984576629 Bacteria 4248407
156 2990260202 2990256926 Bacteria 4252839
157 Ga0500568_0007675
158 LJQas_1002502
159 Ga0070667_100013435
160 Ga0070707_100056645
161 Ga0070698_100010232
162 Ga0075365_10003575
163 Ga0075365_10071125
164 Ga0075365_10126535
165 Ga0075365_10193845
166 Ga0075365_10232940
167 Ga0075365_10392625
168 Ga0075365_10460128
169 Ga0075368_10002353
170 Ga0075363_100003393
171 Ga0075363_100018943
172 Ga0075363_100018955
173 Ga0075363_100075492
174 Ga0075363_100128961
175 Ga0075364_10015094
176 Ga0075364_10098986
177 Ga0075364_10107859
178 Ga0075364_10189468
179 Ga0075362_10148718
180 Ga0075367_10011903
181 Ga0075367_10035259
182 Ga0075367_10111802
183 Ga0075370_10004867
184 Ga0075370_10048831
185 Ga0075370_10093816
186 Ga0111539_10411208
187 Ga0157375_10278161
188 Ga0157375_10982675
189 Ga0163163_10592539
190 Ga0157380_10294390
191 Ga0157377_10390288
192 Ga0163161_10062459
193 Ga0206353_10254089
194 Ga0206353_10762955
195 Ga0207646_10298444
196 Ga0207658_10005925
197 Ga0207708_10009775
198 Ga0207648_10684938
199 Ga0207675_100026043
200 Ga0207675_100359841
201 Ga0209813_10011940
202 Ga0307405_10376382
203 Ga0307410_10087798
204 Ga0307410_10120860
205 Ga0307410_10212435
206 Ga0307407_10501212
207 Ga0307409_100065307
208 Ga0307409_100603017
209 Ga0307411_10493800
210 Ga0307415_100419932
211 Ga0307415_100568843
212 Ga0395900_0011384
213 Ga0395900_0073428
214 Ga0395900_0108297
215 Ga0395898_0992381
216 Ga0395905_0289424
217 Ga0395901_0073630
218 Ga0451837_0585478
219 Ga0439434_0000731
220 Ga0466965_0018040
221 Ga0466965_0020241
222 Ga0466965_0030793
223 Ga0466966_0249124
224 Ga0466961_0023543
225 Ga0466961_0366906
226 Ga0466963_0219725
227 Ga0466971_0043403
228 Ga0466970_0011877
229 Ga0466970_0016456
230 Ga0466970_0064003
231 Ga0466957_0008760
232 Ga0466960_0019586
233 Ga0466960_0031309
234 Ga0466960_0175082
235 Ga0466960_0451807
236 Ga0466958_0004065
237 Ga0466967_0162140
238 Ga0495674_0382367
239 Ga0496101_0020217
240 Ga0496101_0283755
241 Ga0496102_0115958
242 Ga0496104_0016251
243 Ga0496105_0002380
244 Ga0496106_0057940
245 Ga0496106_0395406
246 Ga0496107_0046868
247 Ga0496110_0269843
248 Ga0496114_0009105
249 Ga0496124_0047763
250 Ga0501031_0015429
251 Ga0501031_0249315
252 Ga0501033_0341763
253 Ga0501039_0018136
254 Ga0501041_0135707
255 Ga0501042_0200592
256 Ga0501068_0283546
257 Ga0501071_0026591
258 Ga0501072_0092330
259 Ga0501072_0241908
260 Ga0501075_0182524
261 Ga0501077_0245924
262 Ga0501079_0242536
263 Ga0501080_0358356
264 Ga0501045_0051303
265 nmdc:mga03n38_150668_c1
266 nmdc:mga03n38_203502_c1
267 nmdc:mga03n38_237585_c1
268 nmdc:mga03n38_37167_c1
269 nmdc:mga03n38_82568_c1
270 nmdc:mga00v17_168232_c1
271 nmdc:mga00v17_169878_c1
272 nmdc:mga00v17_217969_c1
273 nmdc:mga00v17_303499_c1
274 nmdc:mga00v17_56653_c1
275 nmdc:mga0yw44_1019_c1
276 nmdc:mga0yw44_15559_c1
277 nmdc:mga0yw44_168417_c1
278 nmdc:mga0yw44_169365_c1
279 nmdc:mga0yw44_18171_c1
280 nmdc:mga0yw44_360593_c1
281 nmdc:mga0yw44_40928_c1
282 nmdc:mga0yw44_81006_c1
283 nmdc:mga0yw44_96195_c1
284 nmdc:mga0yw44_99595_c1
285 nmdc:mga06z11_6338_c1
286 nmdc:mga06z11_9571_c1
287 nmdc:mga04h51_16285_c1
288 nmdc:mga07m45_71661_c1
289 nmdc:mga07m45_80521_c1
290 nmdc:mga07m45_81270_c1
291 nmdc:mga07m45_9799_c1
292 nmdc:mga08y16_271344_c1
293 Ga0500644_0000113
294 Ga0500593_001748
295 Ga0500573_0005933
296 Ga0501084_0372047
297 Ga0466962_0022806
298 Ga0530510_0279063
299 2643826841
300 2643890719
301 2643959775
302 2644032779
303 2644100754
304 2644117162
305 2644534190
306 2738869633
307 2809227898
308 2812330794
309 2852634655
310 2857482393
311 2984577827
312 2990260202

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02146

SIR2

Sir2 family

12

183

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6rxl-assembly1.cif.gz_A crystal structure of cobb wt in complex with h4k16-crotonyl peptide 0.9724 2 227
6rxm-assembly1.cif.gz_A crystal structure of cobb ac2 (a76g, i131c, v162g) in complex with h4k16-acetyl peptide 0.9602 2 227
6rxm-assembly4.cif.gz_D crystal structure of cobb ac2 (a76g, i131c, v162g) in complex with h4k16-acetyl peptide 0.9602 2 227
6rxl-assembly1.cif.gz_A crystal structure of cobb wt in complex with h4k16-crotonyl peptide 0.9598 2 227
6rxr-assembly1.cif.gz_A crystal structure of cobb ac2 (a76g, i131c, v162g) in complex with h4k16cr-2'oh-adpr peptide intermediate after co-crystallisation 0.9588 2 227
ID Description Score Start End Superfamily
1s5pA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9814 2 227 3.40.50.1220
af_A4IAM7_70_238_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9698 64 228 3.40.50.1220
af_P75960_40_271_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9696 2 228 3.40.50.1220
af_P75960_40_271_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9613 2 228 3.40.50.1220
af_A4IAM7_70_238_3.40.50.1220 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;TPP-binding domain 0.9418 64 228 3.40.50.1220
ID Description Score Start End GO Terms
AF-A0A3N0DIK5-F1-model_v4 NAD-dependent protein deacylase 0.9881 1 133 GO:0017136
GO:0070403
AF-A0A417XZ81-F1-model_v4 NAD-dependent protein deacylase (EC 2.3.1.286) (Regulatory protein SIR2 homolog) 0.9879 2 227 GO:0005737
GO:0008270
GO:0032041
GO:0036054
GO:0036055
GO:0046969
GO:0046970
GO:0070403
GO:0097372
GO:0140765
GO:0141222
AF-A0A6I3MD29-F1-model_v4 NAD-dependent protein deacylase (EC 2.3.1.286) (Regulatory protein SIR2 homolog) 0.9869 2 228 GO:0005737
GO:0008270
GO:0032041
GO:0036054
GO:0036055
GO:0046969
GO:0046970
GO:0070403
GO:0097372
GO:0140765
GO:0141222
AF-A0A1S1HEA0-F1-model_v4 NAD-dependent protein deacylase (EC 2.3.1.286) (Regulatory protein SIR2 homolog) 0.9842 2 227 GO:0005737
GO:0008270
GO:0032041
GO:0036054
GO:0036055
GO:0046969
GO:0046970
GO:0070403
GO:0097372
GO:0140765
GO:0141222
AF-A0A316TVB7-F1-model_v4 NAD-dependent protein deacylase (EC 2.3.1.286) (Regulatory protein SIR2 homolog) 0.9839 1 226 GO:0005737
GO:0008270
GO:0032041
GO:0036054
GO:0036055
GO:0046969
GO:0046970
GO:0070403
GO:0097372
GO:0140765
GO:0141222

Map