F225331
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 156 | 122 | 153 | 378 |
Family's Representative Sequence
| Representative Sequence | 3300037418|Ga0395900_0058028|Ga0395900_0058028_487_1773 |
| Length | 428 |
| Sequence | MKPAAAPSGESVLLTKAIQTVADTQPGGIATVEPAQGNGTPAPAAAVPAPPRLLDMGEIAPSFTAQALSGNPAYIFDSAAGRPIVMLFMGSGNWPPNQAALALLARNADLFDDMRAAFFGVTIDQKDAAEKRIAQRIPGIRWFLDYDRQVSRLYNALRGDGASIDYVPYWLLLDSTLRVVMRAPIDQGERIFAGLRGMIAAGEEQTNAPVLMVPRIFEPELCRELIRTYEARGGRETGFMRTQDGKTVGIVDYSFKRRSDCMIDDPALQGILLDRMRRRLLPQMQRAFNYLPTRIERWMVGCYEAEHGGFFRPHRDNTTAGTAHRVFACTINLNAEEFEGGELRFPEYGTRSYRAPTGGAVIFSCSLLHEAMPVTRGTRYAFLPFFYDEDKARLRERNQVHFADGRGGYRASLPDAPGAPAPAGDPQP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2600254954 | Pseudomonas sp. NFACC19-2 | Isolate | Rhizoplane |
| 2 | 2600255389 | Pseudomonas sp. NFPP33 | Isolate | Rhizoplane |
| 3 | 2830075706 | Sphingomonas jinjuensis DSM 21457 | Isolate | Rhizosphere |
| 4 | 3300003214 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL | Metagenome | Endosphere |
| 5 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 6 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 7 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 8 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 11 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 19 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 21 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 22 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 23 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 24 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 25 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 26 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 27 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 28 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 29 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 30 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 31 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 32 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 33 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 34 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 38 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 40 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300020082 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 54 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 55 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 56 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 57 | 3300025254 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025261 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025932 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300027665 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300028556 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG | Metagenome | Rhizosphere |
| 91 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 92 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 93 | 3300031249 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG | Metagenome | Rhizosphere |
| 94 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 95 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 96 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 97 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 98 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 99 | 3300037312 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 | Metagenome | Rhizosphere |
| 100 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 101 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 102 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 103 | 3300042012 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 | Metagenome | Rhizosphere |
| 104 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 105 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 106 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 107 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 108 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 111 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 112 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 113 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 114 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 115 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 118 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 119 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 120 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 121 | 3300053151 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere | Metagenome | Endosphere |
| 122 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.44 |
| Metatranscriptomes | 0.64 |
| Isolates | 1.92 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 10.26 |
| Nodule | 0 |
| Rhizoplane | 1.28 |
| Rhizosphere | 80.77 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 7.69 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25165J46597_1000295 | 3300003214 | Bacteria | 62952 |
| 2 | rootH1_10037571 | 3300003316 | Bacteria | 3524 |
| 3 | rootH2_10178659 | 3300003320 | Bacteria | 3205 |
| 4 | Ga0055529_1003297 | 3300003763 | Bacteria | 2720 |
| 5 | Ga0070658_10000001 | 3300005327 | Bacteria | 856789 |
| 6 | Ga0070658_10003309 | 3300005327 | Bacteria | 13294 |
| 7 | Ga0070658_10007118 | 3300005327 | Bacteria | 9030 |
| 8 | Ga0070658_10085628 | 3300005327 | Bacteria | 2592 |
| 9 | Ga0070658_10103775 | 3300005327 | Bacteria | 2351 |
| 10 | Ga0070677_10001581 | 3300005333 | Bacteria | 7206 |
| 11 | Ga0070680_100029103 | 3300005336 | Bacteria | 4436 |
| 12 | Ga0070680_100213077 | 3300005336 | Unclassified | 1630 |
| 13 | Ga0070660_100001215 | 3300005339 | Bacteria | 17493 |
| 14 | Ga0070660_100283694 | 3300005339 | Bacteria | 1355 |
| 15 | Ga0070692_10000242 | 3300005345 | Bacteria | 15019 |
| 16 | Ga0070668_100064671 | 3300005347 | Bacteria | 2836 |
| 17 | Ga0070674_100162217 | 3300005356 | Bacteria | 1697 |
| 18 | Ga0070659_100001698 | 3300005366 | Bacteria | 15823 |
| 19 | Ga0070659_100018007 | 3300005366 | Bacteria | 5326 |
| 20 | Ga0070663_100125616 | 3300005455 | Unclassified | 1943 |
| 21 | Ga0070681_10099520 | 3300005458 | Bacteria | 2853 |
| 22 | Ga0070681_10176478 | 3300005458 | Bacteria | 2058 |
| 23 | Ga0070679_100003391 | 3300005530 | Bacteria | 14602 |
| 24 | Ga0070679_100014486 | 3300005530 | Bacteria | 7574 |
| 25 | Ga0070665_100006904 | 3300005548 | Bacteria | 11539 |
| 26 | Ga0068855_100000007 | 3300005563 | Bacteria | 273676 |
| 27 | Ga0068855_100056463 | 3300005563 | Bacteria | 4607 |
| 28 | Ga0068855_100174227 | 3300005563 | Bacteria | 2435 |
| 29 | Ga0068857_100005280 | 3300005577 | Bacteria | 11000 |
| 30 | Ga0068857_100007510 | 3300005577 | Bacteria | 9380 |
| 31 | Ga0068854_100000317 | 3300005578 | Bacteria | 31715 |
| 32 | Ga0068856_100008196 | 3300005614 | Bacteria | 10188 |
| 33 | Ga0068852_100000838 | 3300005616 | Bacteria | 20374 |
| 34 | Ga0068852_100153417 | 3300005616 | Bacteria | 2144 |
| 35 | Ga0068859_100169309 | 3300005617 | Bacteria | 2265 |
| 36 | Ga0068863_100065063 | 3300005841 | Bacteria | 3449 |
| 37 | Ga0068858_100127864 | 3300005842 | Bacteria | 2381 |
| 38 | Ga0068858_100131869 | 3300005842 | Bacteria | 2344 |
| 39 | Ga0068860_100002023 | 3300005843 | Bacteria | 21398 |
| 40 | Ga0068862_100000148 | 3300005844 | Bacteria | 79789 |
| 41 | Ga0075369_10031485 | 3300006186 | Bacteria | 2240 |
| 42 | Ga0075370_10024637 | 3300006353 | Bacteria | 3325 |
| 43 | Ga0068871_100026516 | 3300006358 | Unclassified | 4523 |
| 44 | Ga0068865_100000028 | 3300006881 | Bacteria | 91655 |
| 45 | Ga0097620_100169309 | 3300006931 | Bacteria | 2265 |
| 46 | Ga0105240_10130708 | 3300009093 | Bacteria | 3012 |
| 47 | Ga0105240_10168059 | 3300009093 | Bacteria | 2600 |
| 48 | Ga0105245_10000542 | 3300009098 | Bacteria | 34584 |
| 49 | Ga0105247_10003389 | 3300009101 | Bacteria | 10420 |
| 50 | Ga0105243_10000262 | 3300009148 | Bacteria | 59130 |
| 51 | Ga0105242_10001788 | 3300009176 | Bacteria | 16973 |
| 52 | Ga0105237_10107923 | 3300009545 | Bacteria | 2776 |
| 53 | Ga0105238_10069197 | 3300009551 | Bacteria | 3530 |
| 54 | Ga0105249_10000196 | 3300009553 | Bacteria | 69134 |
| 55 | Ga0105239_10008787 | 3300010375 | Bacteria | 11431 |
| 56 | Ga0105246_10001121 | 3300011119 | Bacteria | 15573 |
| 57 | Ga0105246_10035992 | 3300011119 | Unclassified | 3313 |
| 58 | Ga0157373_10008658 | 3300013100 | Bacteria | 7550 |
| 59 | Ga0157370_10000017 | 3300013104 | Bacteria | 169971 |
| 60 | Ga0157374_10006712 | 3300013296 | Bacteria | 9780 |
| 61 | Ga0157374_10016161 | 3300013296 | Bacteria | 6558 |
| 62 | Ga0157378_10001861 | 3300013297 | Bacteria | 18954 |
| 63 | Ga0157372_10154288 | 3300013307 | Unclassified | 2652 |
| 64 | Ga0157375_10000394 | 3300013308 | Bacteria | 39744 |
| 65 | Ga0157376_10000674 | 3300014969 | Bacteria | 22078 |
| 66 | Ga0163161_10110910 | 3300017792 | Unclassified | 2051 |
| 67 | Ga0206353_10134963 | 3300020082 | Bacteria | 4085 |
| 68 | Ga0213876_10001365 | 3300021384 | Bacteria | 15275 |
| 69 | Ga0207427_100486 | 3300025231 | Bacteria | 21377 |
| 70 | Ga0209026_1002845 | 3300025250 | Bacteria | 6115 |
| 71 | Ga0209148_1002249 | 3300025254 | Bacteria | 7009 |
| 72 | Ga0209233_1000003 | 3300025261 | Bacteria | 1607366 |
| 73 | Ga0209455_1000891 | 3300025272 | Bacteria | 15654 |
| 74 | Ga0207682_10001181 | 3300025893 | Bacteria | 12118 |
| 75 | Ga0207645_10001384 | 3300025907 | Bacteria | 19917 |
| 76 | Ga0207705_10000002 | 3300025909 | Bacteria | 2046852 |
| 77 | Ga0207705_10000178 | 3300025909 | Bacteria | 67084 |
| 78 | Ga0207705_10000265 | 3300025909 | Bacteria | 50412 |
| 79 | Ga0207705_10004832 | 3300025909 | Bacteria | 10140 |
| 80 | Ga0207705_10163264 | 3300025909 | Bacteria | 1674 |
| 81 | Ga0207707_10290424 | 3300025912 | Bacteria | 1415 |
| 82 | Ga0207695_10003225 | 3300025913 | Bacteria | 23212 |
| 83 | Ga0207695_10055751 | 3300025913 | Bacteria | 4116 |
| 84 | Ga0207671_10058473 | 3300025914 | Bacteria | 2858 |
| 85 | Ga0207660_10071704 | 3300025917 | Bacteria | 2521 |
| 86 | Ga0207657_10002242 | 3300025919 | Bacteria | 20957 |
| 87 | Ga0207657_10003631 | 3300025919 | Bacteria | 16431 |
| 88 | Ga0207657_10081159 | 3300025919 | Unclassified | 2725 |
| 89 | Ga0207652_10014866 | 3300025921 | Bacteria | 6311 |
| 90 | Ga0207652_10087418 | 3300025921 | Bacteria | 2733 |
| 91 | Ga0207694_10058990 | 3300025924 | Bacteria | 2985 |
| 92 | Ga0207690_10009305 | 3300025932 | Bacteria | 5836 |
| 93 | Ga0207690_10010071 | 3300025932 | Bacteria | 5615 |
| 94 | Ga0207709_10000100 | 3300025935 | Bacteria | 135080 |
| 95 | Ga0207704_10000038 | 3300025938 | Bacteria | 93892 |
| 96 | Ga0207689_10001233 | 3300025942 | Bacteria | 24630 |
| 97 | Ga0207667_10000038 | 3300025949 | Bacteria | 280720 |
| 98 | Ga0207667_10017722 | 3300025949 | Bacteria | 8010 |
| 99 | Ga0207651_10000018 | 3300025960 | Bacteria | 93906 |
| 100 | Ga0207712_10000015 | 3300025961 | Bacteria | 346689 |
| 101 | Ga0207640_10000109 | 3300025981 | Bacteria | 62407 |
| 102 | Ga0207677_10000408 | 3300026023 | Bacteria | 29631 |
| 103 | Ga0207639_10024334 | 3300026041 | Unclassified | 4381 |
| 104 | Ga0207678_10002666 | 3300026067 | Bacteria | 16205 |
| 105 | Ga0207702_10000824 | 3300026078 | Bacteria | 32722 |
| 106 | Ga0207702_10005980 | 3300026078 | Bacteria | 10566 |
| 107 | Ga0207641_10003566 | 3300026088 | Bacteria | 13753 |
| 108 | Ga0207648_10000074 | 3300026089 | Bacteria | 93851 |
| 109 | Ga0207674_10020756 | 3300026116 | Bacteria | 7090 |
| 110 | Ga0207674_10037284 | 3300026116 | Bacteria | 5058 |
| 111 | Ga0207698_10000841 | 3300026142 | Bacteria | 17794 |
| 112 | Ga0209983_1002616 | 3300027665 | Bacteria | 3919 |
| 113 | Ga0268266_10001257 | 3300028379 | Bacteria | 30973 |
| 114 | Ga0268265_10000168 | 3300028380 | Bacteria | 79798 |
| 115 | Ga0268264_10002990 | 3300028381 | Bacteria | 14672 |
| 116 | Ga0265337_1004714 | 3300028556 | Bacteria | 5602 |
| 117 | Ga0265334_10000828 | 3300028573 | Bacteria | 15466 |
| 118 | Ga0265338_10009491 | 3300028800 | Bacteria | 11592 |
| 119 | Ga0265339_10000358 | 3300031249 | Bacteria | 36170 |
| 120 | Ga0307513_10075627 | 3300031456 | Bacteria | 3496 |
| 121 | Ga0265313_10064661 | 3300031595 | Bacteria | 1701 |
| 122 | Ga0265314_10000011 | 3300031711 | Bacteria | 445050 |
| 123 | Ga0307412_10037320 | 3300031911 | Bacteria | 3121 |
| 124 | Ga0373937_0137156 | 3300036401 | Bacteria | 2288 |
| 125 | Ga0395899_0003812 | 3300037312 | Bacteria | 11908 |
| 126 | Ga0395900_0058028 | 3300037418 | Bacteria | 3985 |
| 127 | Ga0395900_0209753 | 3300037418 | Bacteria | 1967 |
| 128 | Ga0395905_0138070 | 3300037471 | Bacteria | 2294 |
| 129 | Ga0436365_1104251 | 3300039437 | Bacteria | 95104 |
| 130 | Ga0439455_0005941 | 3300042012 | Bacteria | 2507 |
| 131 | Ga0466966_0193191 | 3300044684 | Bacteria | 1233 |
| 132 | Ga0466970_0111801 | 3300044765 | Bacteria | 1492 |
| 133 | Ga0466959_0090707 | 3300045049 | Bacteria | 2195 |
| 134 | Ga0466967_0322932 | 3300045976 | Bacteria | 1489 |
| 135 | Ga0495625_0026875 | 3300046660 | Bacteria | 4341 |
| 136 | Ga0495686_0000132 | 3300047472 | Bacteria | 151609 |
| 137 | Ga0495686_0064758 | 3300047472 | Bacteria | 2262 |
| 138 | Ga0496118_0107871 | 3300048921 | Bacteria | 1858 |
| 139 | Ga0496119_0042278 | 3300048922 | Unclassified | 2892 |
| 140 | Ga0496120_0015304 | 3300048923 | Bacteria | 5069 |
| 141 | Ga0496120_0070690 | 3300048923 | Unclassified | 1919 |
| 142 | Ga0496121_0010154 | 3300048924 | Bacteria | 10664 |
| 143 | Ga0496125_0001943 | 3300048928 | Bacteria | 28219 |
| 144 | Ga0501034_0150177 | 3300049571 | Bacteria | 2306 |
| 145 | Ga0501047_0034396 | 3300049581 | Bacteria | 4892 |
| 146 | nmdc:mga0sz30_15687_c1 | 3300050516 | Bacteria | 2996 |
| 147 | Ga0500608_000037 | 3300053122 | Bacteria | 60499 |
| 148 | Ga0500559_0001365 | 3300053136 | Bacteria | 13991 |
| 149 | Ga0500568_0002321 | 3300053139 | Bacteria | 11284 |
| 150 | Ga0500604_0000058 | 3300053151 | Bacteria | 40241 |
| 151 | Ga0500604_0001202 | 3300053151 | Bacteria | 7211 |
| 152 | Ga0500616_0000087 | 3300053153 | Bacteria | 192225 |
| 153 | Ga0500616_0032848 | 3300053153 | Bacteria | 2836 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005366 | Ga0070659_100018007 | Ga0070659_1000180072 | 344 |
| 2 | 3300025932 | Ga0207690_10010071 | Ga0207690_100100712 | 344 |
| 3 | 3300049581 | Ga0501047_0034396 | Ga0501047_0034396_1139_2185 | 345 |
| 4 | 3300005336 | Ga0070680_100213077 | Ga0070680_1002130772 | 350 |
| 5 | 3300049571 | Ga0501034_0150177 | Ga0501034_0150177_436_1506 | 350 |
| 6 | 3300006353 | Ga0075370_10024637 | Ga0075370_100246372 | 351 |
| 7 | 3300027665 | Ga0209983_1002616 | Ga0209983_10026163 | 351 |
| 8 | 3300036401 | Ga0373937_0137156 | Ga0373937_0137156_906_1982 | 351 |
| 9 | 3300053122 | Ga0500608_000037 | Ga0500608_000037_35564_36628 | 351 |
| 10 | 3300053136 | Ga0500559_0001365 | Ga0500559_0001365_367_1431 | 351 |
| 11 | 3300005327 | Ga0070658_10085628 | Ga0070658_100856282 | 352 |
| 12 | 3300025909 | Ga0207705_10163264 | Ga0207705_101632642 | 352 |
| 13 | 3300044684 | Ga0466966_0193191 | Ga0466966_0193191_32_1102 | 353 |
| 14 | 3300045049 | Ga0466959_0090707 | Ga0466959_0090707_1055_2125 | 353 |
| 15 | 3300053153 | Ga0500616_0032848 | Ga0500616_0032848_1662_2786 | 355 |
| 16 | 3300046660 | Ga0495625_0026875 | Ga0495625_0026875_554_1672 | 356 |
| 17 | 3300048922 | Ga0496119_0042278 | Ga0496119_0042278_1036_2121 | 356 |
| 18 | 3300048923 | Ga0496120_0070690 | Ga0496120_0070690_536_1621 | 356 |
| 19 | 3300053151 | Ga0500604_0001202 | Ga0500604_0001202_3098_4192 | 357 |
| 20 | 3300031249 | Ga0265339_10000358 | Ga0265339_1000035830 | 359 |
| 21 | 3300031711 | Ga0265314_10000011 | Ga0265314_1000001140 | 359 |
| 22 | iso_pu_bacteria | 2830075706 | 2830076952 | 359 |
| 23 | 3300005327 | Ga0070658_10000001 | Ga0070658_10000001112 | 362 |
| 24 | 3300005339 | Ga0070660_100283694 | Ga0070660_1002836941 | 362 |
| 25 | 3300005345 | Ga0070692_10000242 | Ga0070692_100002429 | 362 |
| 26 | 3300005366 | Ga0070659_100001698 | Ga0070659_1000016984 | 362 |
| 27 | 3300021384 | Ga0213876_10001365 | Ga0213876_100013659 | 362 |
| 28 | 3300025909 | Ga0207705_10000002 | Ga0207705_100000021767 | 362 |
| 29 | 3300025919 | Ga0207657_10003631 | Ga0207657_100036312 | 362 |
| 30 | 3300025932 | Ga0207690_10009305 | Ga0207690_100093052 | 362 |
| 31 | 3300039437 | Ga0436365_1104251 | Ga0436365_1104251_49988_51076 | 362 |
| 32 | 3300003316 | rootH1_10037571 | rootH1_100375712 | 363 |
| 33 | 3300005339 | Ga0070660_100001215 | Ga0070660_1000012152 | 363 |
| 34 | 3300005455 | Ga0070663_100125616 | Ga0070663_1001256162 | 363 |
| 35 | 3300005563 | Ga0068855_100000007 | Ga0068855_10000000768 | 363 |
| 36 | 3300005577 | Ga0068857_100007510 | Ga0068857_1000075105 | 363 |
| 37 | 3300005616 | Ga0068852_100000838 | Ga0068852_10000083810 | 363 |
| 38 | 3300009545 | Ga0105237_10107923 | Ga0105237_101079232 | 363 |
| 39 | 3300010375 | Ga0105239_10008787 | Ga0105239_100087875 | 363 |
| 40 | 3300013100 | Ga0157373_10008658 | Ga0157373_100086585 | 363 |
| 41 | 3300013296 | Ga0157374_10016161 | Ga0157374_100161616 | 363 |
| 42 | 3300013307 | Ga0157372_10154288 | Ga0157372_101542882 | 363 |
| 43 | 3300025909 | Ga0207705_10000265 | Ga0207705_1000026539 | 363 |
| 44 | 3300025914 | Ga0207671_10058473 | Ga0207671_100584732 | 363 |
| 45 | 3300025919 | Ga0207657_10002242 | Ga0207657_100022424 | 363 |
| 46 | 3300025949 | Ga0207667_10000038 | Ga0207667_1000003866 | 363 |
| 47 | 3300026078 | Ga0207702_10000824 | Ga0207702_100008243 | 363 |
| 48 | 3300026116 | Ga0207674_10020756 | Ga0207674_100207565 | 363 |
| 49 | 3300026142 | Ga0207698_10000841 | Ga0207698_100008414 | 363 |
| 50 | 3300037471 | Ga0395905_0138070 | Ga0395905_0138070_1146_2240 | 363 |
| 51 | iso_pu_bacteria | 2600254954 | 2600443199 | 363 |
| 52 | iso_pu_bacteria | 2600255389 | 2602009312 | 363 |
| 53 | 3300028556 | Ga0265337_1004714 | Ga0265337_10047141 | 364 |
| 54 | 3300028573 | Ga0265334_10000828 | Ga0265334_1000082811 | 364 |
| 55 | 3300028800 | Ga0265338_10009491 | Ga0265338_100094913 | 364 |
| 56 | 3300031595 | Ga0265313_10064661 | Ga0265313_100646612 | 364 |
| 57 | 3300005336 | Ga0070680_100029103 | Ga0070680_1000291033 | 365 |
| 58 | 3300005458 | Ga0070681_10099520 | Ga0070681_100995203 | 365 |
| 59 | 3300005530 | Ga0070679_100014486 | Ga0070679_1000144862 | 365 |
| 60 | 3300005563 | Ga0068855_100056463 | Ga0068855_1000564632 | 365 |
| 61 | 3300005616 | Ga0068852_100153417 | Ga0068852_1001534171 | 365 |
| 62 | 3300009093 | Ga0105240_10130708 | Ga0105240_101307081 | 365 |
| 63 | 3300009551 | Ga0105238_10069197 | Ga0105238_100691972 | 365 |
| 64 | 3300025913 | Ga0207695_10003225 | Ga0207695_1000322519 | 365 |
| 65 | 3300025917 | Ga0207660_10071704 | Ga0207660_100717042 | 365 |
| 66 | 3300025921 | Ga0207652_10087418 | Ga0207652_100874182 | 365 |
| 67 | 3300025924 | Ga0207694_10058990 | Ga0207694_100589903 | 365 |
| 68 | 3300025949 | Ga0207667_10017722 | Ga0207667_100177225 | 365 |
| 69 | 3300005333 | Ga0070677_10001581 | Ga0070677_100015815 | 367 |
| 70 | 3300005356 | Ga0070674_100162217 | Ga0070674_1001622172 | 367 |
| 71 | 3300025893 | Ga0207682_10001181 | Ga0207682_1000118110 | 367 |
| 72 | 3300005617 | Ga0068859_100169309 | Ga0068859_1001693092 | 369 |
| 73 | 3300005841 | Ga0068863_100065063 | Ga0068863_1000650633 | 369 |
| 74 | 3300005843 | Ga0068860_100002023 | Ga0068860_1000020237 | 369 |
| 75 | 3300005844 | Ga0068862_100000148 | Ga0068862_10000014829 | 369 |
| 76 | 3300006186 | Ga0075369_10031485 | Ga0075369_100314851 | 369 |
| 77 | 3300006931 | Ga0097620_100169309 | Ga0097620_1001693091 | 369 |
| 78 | 3300009101 | Ga0105247_10003389 | Ga0105247_100033898 | 369 |
| 79 | 3300009553 | Ga0105249_10000196 | Ga0105249_1000019670 | 369 |
| 80 | 3300025961 | Ga0207712_10000015 | Ga0207712_10000015295 | 369 |
| 81 | 3300026088 | Ga0207641_10003566 | Ga0207641_100035662 | 369 |
| 82 | 3300028380 | Ga0268265_10000168 | Ga0268265_1000016851 | 369 |
| 83 | 3300028381 | Ga0268264_10002990 | Ga0268264_100029902 | 369 |
| 84 | 3300031456 | Ga0307513_10075627 | Ga0307513_100756273 | 369 |
| 85 | 3300050516 | nmdc:mga0sz30_15687_c1 | nmdc:mga0sz30_15687_c1_1660_2778 | 369 |
| 86 | 3300005327 | Ga0070658_10103775 | Ga0070658_101037752 | 370 |
| 87 | 3300005548 | Ga0070665_100006904 | Ga0070665_1000069049 | 370 |
| 88 | 3300028379 | Ga0268266_10001257 | Ga0268266_100012573 | 370 |
| 89 | 3300053139 | Ga0500568_0002321 | Ga0500568_0002321_1035_2153 | 370 |
| 90 | 3300053153 | Ga0500616_0000087 | Ga0500616_0000087_41327_42445 | 370 |
| 91 | 3300005563 | Ga0068855_100174227 | Ga0068855_1001742272 | 371 |
| 92 | 3300020082 | Ga0206353_10134963 | Ga0206353_101349635 | 371 |
| 93 | 3300047472 | Ga0495686_0064758 | Ga0495686_0064758_584_1726 | 371 |
| 94 | 3300003320 | rootH2_10178659 | rootH2_101786593 | 373 |
| 95 | 3300037312 | Ga0395899_0003812 | Ga0395899_0003812_7354_8475 | 373 |
| 96 | 3300037418 | Ga0395900_0209753 | Ga0395900_0209753_604_1725 | 373 |
| 97 | 3300005458 | Ga0070681_10176478 | Ga0070681_101764781 | 374 |
| 98 | 3300005530 | Ga0070679_100003391 | Ga0070679_10000339113 | 374 |
| 99 | 3300025921 | Ga0207652_10014866 | Ga0207652_100148661 | 374 |
| 100 | 3300005347 | Ga0070668_100064671 | Ga0070668_1000646712 | 375 |
| 101 | 3300005842 | Ga0068858_100127864 | Ga0068858_1001278642 | 375 |
| 102 | 3300045976 | Ga0466967_0322932 | Ga0466967_0322932_250_1476 | 375 |
| 103 | 3300005577 | Ga0068857_100005280 | Ga0068857_1000052807 | 376 |
| 104 | 3300009098 | Ga0105245_10000542 | Ga0105245_1000054231 | 376 |
| 105 | 3300009148 | Ga0105243_10000262 | Ga0105243_1000026238 | 376 |
| 106 | 3300009176 | Ga0105242_10001788 | Ga0105242_1000178810 | 376 |
| 107 | 3300011119 | Ga0105246_10001121 | Ga0105246_1000112112 | 376 |
| 108 | 3300011119 | Ga0105246_10035992 | Ga0105246_100359924 | 376 |
| 109 | 3300013296 | Ga0157374_10006712 | Ga0157374_100067126 | 376 |
| 110 | 3300013297 | Ga0157378_10001861 | Ga0157378_1000186112 | 376 |
| 111 | 3300013308 | Ga0157375_10000394 | Ga0157375_1000039439 | 376 |
| 112 | 3300014969 | Ga0157376_10000674 | Ga0157376_1000067412 | 376 |
| 113 | 3300017792 | Ga0163161_10110910 | Ga0163161_101109101 | 376 |
| 114 | 3300026116 | Ga0207674_10037284 | Ga0207674_100372847 | 376 |
| 115 | 3300042012 | Ga0439455_0005941 | Ga0439455_0005941_1103_2284 | 376 |
| 116 | 3300031911 | Ga0307412_10037320 | Ga0307412_100373203 | 383 |
| 117 | 3300006881 | Ga0068865_100000028 | Ga0068865_100000028108 | 384 |
| 118 | 3300025907 | Ga0207645_10001384 | Ga0207645_1000138429 | 384 |
| 119 | 3300025935 | Ga0207709_10000100 | Ga0207709_10000100101 | 384 |
| 120 | 3300025938 | Ga0207704_10000038 | Ga0207704_1000003812 | 384 |
| 121 | 3300025942 | Ga0207689_10001233 | Ga0207689_1000123323 | 384 |
| 122 | 3300025960 | Ga0207651_10000018 | Ga0207651_10000018101 | 384 |
| 123 | 3300026023 | Ga0207677_10000408 | Ga0207677_1000040812 | 384 |
| 124 | 3300026089 | Ga0207648_10000074 | Ga0207648_10000074101 | 384 |
| 125 | 3300048921 | Ga0496118_0107871 | Ga0496118_0107871_133_1290 | 384 |
| 126 | 3300025912 | Ga0207707_10290424 | Ga0207707_102904241 | 388 |
| 127 | 3300053151 | Ga0500604_0000058 | Ga0500604_0000058_2670_3842 | 388 |
| 128 | 3300005578 | Ga0068854_100000317 | Ga0068854_10000031718 | 389 |
| 129 | 3300005842 | Ga0068858_100131869 | Ga0068858_1001318691 | 389 |
| 130 | 3300006358 | Ga0068871_100026516 | Ga0068871_1000265164 | 389 |
| 131 | 3300025981 | Ga0207640_10000109 | Ga0207640_100001099 | 389 |
| 132 | 3300026041 | Ga0207639_10024334 | Ga0207639_100243344 | 389 |
| 133 | 3300026067 | Ga0207678_10002666 | Ga0207678_100026662 | 389 |
| 134 | 3300048923 | Ga0496120_0015304 | Ga0496120_0015304_2080_3297 | 392 |
| 135 | 3300048924 | Ga0496121_0010154 | Ga0496121_0010154_1612_2829 | 392 |
| 136 | 3300048928 | Ga0496125_0001943 | Ga0496125_0001943_25454_26671 | 392 |
| 137 | 3300005327 | Ga0070658_10007118 | Ga0070658_100071182 | 402 |
| 138 | 3300025909 | Ga0207705_10004832 | Ga0207705_100048322 | 402 |
| 139 | 3300047472 | Ga0495686_0000132 | Ga0495686_0000132_47965_49179 | 403 |
| 140 | 3300009093 | Ga0105240_10168059 | Ga0105240_101680594 | 406 |
| 141 | 3300025913 | Ga0207695_10055751 | Ga0207695_100557514 | 406 |
| 142 | 3300044765 | Ga0466970_0111801 | Ga0466970_0111801_247_1482 | 411 |
| 143 | 3300005327 | Ga0070658_10003309 | Ga0070658_1000330910 | 413 |
| 144 | 3300025909 | Ga0207705_10000178 | Ga0207705_1000017869 | 413 |
| 145 | 3300003763 | Ga0055529_1003297 | Ga0055529_10032971 | 415 |
| 146 | 3300025254 | Ga0209148_1002249 | Ga0209148_10022498 | 415 |
| 147 | 3300025272 | Ga0209455_1000891 | Ga0209455_100089123 | 415 |
| 148 | 3300025919 | Ga0207657_10081159 | Ga0207657_100811594 | 415 |
| 149 | 3300037418 | Ga0395900_0058028 | Ga0395900_0058028_487_1773 | 415 |
| 150 | 3300003214 | JGI25165J46597_1000295 | JGI25165J46597_100029513 | 416 |
| 151 | 3300005614 | Ga0068856_100008196 | Ga0068856_1000081969 | 416 |
| 152 | 3300013104 | Ga0157370_10000017 | Ga0157370_10000017113 | 416 |
| 153 | 3300025231 | Ga0207427_100486 | Ga0207427_10048612 | 416 |
| 154 | 3300025250 | Ga0209026_1002845 | Ga0209026_10028453 | 416 |
| 155 | 3300025261 | Ga0209233_1000003 | Ga0209233_1000003828 | 416 |
| 156 | 3300026078 | Ga0207702_10005980 | Ga0207702_100059809 | 416 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6ax6-assembly1.cif.gz_A | the crystal structure of a lysyl hydroxylase from acanthamoeba polyphaga mimivirus | 0.8234 | 197 | 374 |
| 6ax7-assembly1.cif.gz_A | the crystal structure of a lysyl hydroxylase from acanthamoeba polyphaga mimivirus | 0.8172 | 197 | 374 |
| 3hjp-assembly2.cif.gz_D | the crystal structure of bcp4 from sulfolobus solfataricus | 0.8124 | 41 | 188 |
| 2h1b-assembly2.cif.gz_B | resa e80q | 0.8091 | 45 | 187 |
| 1st9-assembly2.cif.gz_B | crystal structure of a soluble domain of resa in the oxidised form | 0.8085 | 46 | 187 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A1D8PPZ7_421_512_2.60.120.10 | Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls | 0.8186 | 285 | 376 | 2.60.120.10 |
| 1st9A00 | Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin | 0.7959 | 45 | 187 | 3.40.30.10 |
| af_Q7G959_1_155_3.40.30.10 | Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin | 0.7942 | 41 | 186 | 3.40.30.10 |
| af_O94561_50_193_3.40.30.10 | Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin | 0.7857 | 46 | 185 | 3.40.30.10 |
| 2ls5A00 | Alpha Beta;3-Layer(aba) Sandwich;Glutaredoxin;Glutaredoxin | 0.7819 | 42 | 186 | 3.40.30.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1G5IDF8-F1-model_v4 | Predicted 2-oxoglutarate-and Fe(II)-dependent dioxygenase YbiX | 0.9874 | 195 | 383 |
GO:0005506
GO:0016705 GO:0031418 GO:0051213 |
| AF-A0A3D2RFE9-F1-model_v4 | Fe2OG dioxygenase domain-containing protein | 0.9803 | 268 | 378 |
|
| AF-A0A1E4ESU9-F1-model_v4 | Fe2OG dioxygenase domain-containing protein | 0.9786 | 193 | 388 |
GO:0005506
GO:0016705 GO:0031418 GO:0051213 |
| AF-A0A845ZN08-F1-model_v4 | 2OG-Fe(II) oxygenase | 0.9727 | 238 | 385 |
|
| AF-A0A6P0M7V9-F1-model_v4 | 2OG-Fe(II) oxygenase | 0.9717 | 258 | 385 |
|
Predicted Structure (AlphaFold2)
Powered by PDBe Molstar