F224932
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 156 | 103 | 128 | 148 |
Family's Representative Sequence
| Representative Sequence | 3300020081|Ga0206354_10327087|Ga0206354_103270872 |
| Length | 170 |
| Sequence | VSPIPTPPTGWQAAAERAVAHGRTLDRFIPSILLDSPASGVGYAYGTAVGWIWGGLWSTGRVEKRGELWVFRGLPSWAFKRGGICVGGCYLTGDAVVTDRVLAHEAVHARQWRRYGLLMPLLYLFAGRDPLRNRFEIEAGLEDGNYVPRQKAARPTGAVSSARPSTAQSR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2585428157 | Microbacterium sp. CF335 | Isolate | Rhizosphere |
| 2 | 2643221542 | Microbacterium sp. Root1433D1 | Isolate | Unclassified |
| 3 | 2643221553 | Microbacterium sp. Root553 | Isolate | Unclassified |
| 4 | 2643221566 | Microbacterium sp. Root166 | Isolate | Unclassified |
| 5 | 2643221597 | Microbacterium sp. Root180 | Isolate | Unclassified |
| 6 | 2643221630 | Microbacterium sp. Root322 | Isolate | Unclassified |
| 7 | 2643221724 | Microbacterium sp. Root280D1 | Isolate | Unclassified |
| 8 | 2728369380 | Microbacterium sp. 1.5R | Isolate | Rhizosphere |
| 9 | 2747842429 | Microbacterium sp. WCS2014-259 | Isolate | Unclassified |
| 10 | 2757320536 | Microbacterium sp. NFIX05 | Isolate | Unclassified |
| 11 | 2808606306 | Microbacterium sp. SLBN-146 | Isolate | Unclassified |
| 12 | 2808606447 | Microbacterium sp. HAR-UPW-R2A-48 | Isolate | Unclassified |
| 13 | 2811994872 | Microbacterium sp. MU4Y-5-1 | Isolate | Unclassified |
| 14 | 2852632344 | Microbacterium sp. AK009 | Isolate | Rhizosphere |
| 15 | 2852646457 | Microbacterium sp. AK031 | Isolate | Rhizosphere |
| 16 | 2852663356 | Microbacterium sp. JAI119 | Isolate | Rhizosphere |
| 17 | 2857723135 | Microbacterium sp. R-72356 | Isolate | Unclassified |
| 18 | 2870628048 | Microbacterium thalassium DSM 12511 | Isolate | Rhizosphere |
| 19 | 2919395869 | Microbacterium resistens 2980 | Isolate | Unclassified |
| 20 | 2928090899 | Microbacterium sp. 1262 | Isolate | Rhizosphere |
| 21 | 2945968032 | Microbacterium murale W2I7 | Isolate | Rhizosphere |
| 22 | 2946033335 | Microbacterium sp. W4I4 | Isolate | Rhizosphere |
| 23 | 2946041624 | Microbacterium natoriense W4I9-1 | Isolate | Rhizosphere |
| 24 | 2946080515 | Microbacterium sp. W4I20 | Isolate | Rhizosphere |
| 25 | 3300001979 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 | Metagenome | Rhizosphere |
| 26 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 27 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 28 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 29 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 30 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 31 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 32 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 33 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 34 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 37 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300013250 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 | Metagenome | Rhizosphere |
| 39 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 42 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 43 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 47 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 48 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 49 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 50 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 51 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 52 | 3300041451 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG | Metagenome | Rhizoplane |
| 53 | 3300041494 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG | Metagenome | Unclassified |
| 54 | 3300041498 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG | Metagenome | Unclassified |
| 55 | 3300041509 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG | Metagenome | Unclassified |
| 56 | 3300041511 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG | Metagenome | Unclassified |
| 57 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 58 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 59 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 60 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 61 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 62 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 63 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046515 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046519 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 68 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 69 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 70 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 71 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 72 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 73 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 74 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 75 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 76 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 77 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 78 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 79 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 80 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 81 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 82 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 83 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 84 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 85 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 86 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 87 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 88 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 89 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 90 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 91 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 92 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 93 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 94 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 95 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 96 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 97 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 98 | 3300053117 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere | Metagenome | Endosphere |
| 99 | 3300059477 | Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 100 | 8004182704 | Microbacterium paraoxydans ku-mp | Isolate | Unclassified |
| 101 | 8004212874 | Microbacterium sp. NC79 | Isolate | Rhizosphere |
| 102 | 8016254467 | Microbacterium sp. SLBN-111 (version 3) | Isolate | Rhizosphere |
| 103 | 8045830549 | Microbacterium yannicii DSM 23203 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 80.13 |
| Metatranscriptomes | 1.92 |
| Isolates | 17.95 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 12.18 |
| Nodule | 0 |
| Rhizoplane | 14.74 |
| Rhizosphere | 33.97 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 39.1 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24740J21852_10017451 | 3300001979 | Bacteria | 2567 |
| 2 | JGI25154J39366_1001941 | 3300002738 | Bacteria | 6165 |
| 3 | rootH2_10104023 | 3300003320 | Bacteria | 1868 |
| 4 | Ga0006562J51391_1056185 | 3300003578 | Bacteria | 3320 |
| 5 | Ga0075365_10002202 | 3300006038 | Bacteria | 9402 |
| 6 | Ga0075363_100015615 | 3300006048 | Bacteria | 3736 |
| 7 | Ga0075363_100572879 | 3300006048 | Bacteria | 675 |
| 8 | Ga0075364_10016761 | 3300006051 | Bacteria | 4564 |
| 9 | Ga0075364_10056497 | 3300006051 | Bacteria | 2570 |
| 10 | Ga0075364_10218781 | 3300006051 | Bacteria | 1292 |
| 11 | Ga0075364_10275758 | 3300006051 | Bacteria | 1144 |
| 12 | Ga0075364_10299303 | 3300006051 | Bacteria | 1095 |
| 13 | Ga0075367_10009449 | 3300006178 | Bacteria | 5097 |
| 14 | Ga0075369_10080060 | 3300006186 | Bacteria | 1448 |
| 15 | Ga0105244_10162712 | 3300009036 | Bacteria | 1065 |
| 16 | Ga0105243_10031728 | 3300009148 | Bacteria | 4075 |
| 17 | Ga0105237_10067496 | 3300009545 | Bacteria | 3570 |
| 18 | Ga0157369_10214116 | 3300013105 | Bacteria | 2019 |
| 19 | Ga0171462_1001 | 3300013250 | Bacteria | 1135406 |
| 20 | Ga0163162_10028888 | 3300013306 | Bacteria | 5488 |
| 21 | Ga0157372_10243662 | 3300013307 | Bacteria | 2086 |
| 22 | Ga0206354_10327087 | 3300020081 | Bacteria | 1255 |
| 23 | Ga0209646_1000134 | 3300025246 | Bacteria | 124492 |
| 24 | Ga0207655_1047905 | 3300025728 | Bacteria | 1759 |
| 25 | Ga0207655_1090762 | 3300025728 | Bacteria | 1076 |
| 26 | Ga0207709_10015922 | 3300025935 | Bacteria | 4173 |
| 27 | Ga0207683_11585008 | 3300026121 | Bacteria | 604 |
| 28 | Ga0307413_10304059 | 3300031824 | Bacteria | 1211 |
| 29 | Ga0307406_10000025 | 3300031901 | Bacteria | 92128 |
| 30 | Ga0307406_10000955 | 3300031901 | Bacteria | 16163 |
| 31 | Ga0307406_10010693 | 3300031901 | Bacteria | 5183 |
| 32 | Ga0307406_10028886 | 3300031901 | Bacteria | 3354 |
| 33 | Ga0307406_10363888 | 3300031901 | Bacteria | 1135 |
| 34 | Ga0307406_11261022 | 3300031901 | Bacteria | 644 |
| 35 | Ga0307412_10139725 | 3300031911 | Bacteria | 1772 |
| 36 | Ga0307409_101011163 | 3300031995 | Bacteria | 850 |
| 37 | Ga0307416_100309625 | 3300032002 | Bacteria | 1575 |
| 38 | Ga0307414_10004620 | 3300032004 | Bacteria | 7491 |
| 39 | Ga0307414_10139509 | 3300032004 | Bacteria | 1896 |
| 40 | Ga0307414_10558651 | 3300032004 | Bacteria | 1021 |
| 41 | Ga0451791_0642209 | 3300041451 | Bacteria | 519 |
| 42 | Ga0451837_0271138 | 3300041494 | Bacteria | 1128 |
| 43 | Ga0451841_1278020 | 3300041498 | Bacteria | 1195 |
| 44 | Ga0451843_0777373 | 3300041509 | Bacteria | 561 |
| 45 | Ga0451855_1970166 | 3300041511 | Bacteria | 710 |
| 46 | Ga0451853_0838337 | 3300041512 | Bacteria | 1202 |
| 47 | Ga0451853_2361289 | 3300041512 | Bacteria | 632 |
| 48 | Ga0466965_0140756 | 3300044683 | Bacteria | 1256 |
| 49 | Ga0466970_0000835 | 3300044765 | Bacteria | 14806 |
| 50 | Ga0466957_0024556 | 3300044842 | Bacteria | 3567 |
| 51 | Ga0466960_0595029 | 3300044901 | Bacteria | 656 |
| 52 | Ga0466967_0084466 | 3300045976 | Bacteria | 2873 |
| 53 | Ga0495627_000588 | 3300046453 | Bacteria | 29097 |
| 54 | Ga0495620_0194727 | 3300046515 | Bacteria | 781 |
| 55 | Ga0495632_0346357 | 3300046519 | Bacteria | 654 |
| 56 | Ga0495648_0489416 | 3300046524 | Bacteria | 530 |
| 57 | Ga0496100_0004189 | 3300048903 | Bacteria | 7606 |
| 58 | Ga0496101_0159687 | 3300048904 | Bacteria | 1728 |
| 59 | Ga0496102_0032638 | 3300048905 | Bacteria | 4678 |
| 60 | Ga0496103_0011344 | 3300048906 | Bacteria | 5278 |
| 61 | Ga0496103_0053759 | 3300048906 | Bacteria | 2496 |
| 62 | Ga0496104_0036857 | 3300048907 | Bacteria | 4572 |
| 63 | Ga0496104_0241629 | 3300048907 | Bacteria | 1718 |
| 64 | Ga0496104_0834106 | 3300048907 | Bacteria | 827 |
| 65 | Ga0496105_0123504 | 3300048908 | Bacteria | 2134 |
| 66 | Ga0496105_0374086 | 3300048908 | Bacteria | 1134 |
| 67 | Ga0496107_0004498 | 3300048910 | Bacteria | 9457 |
| 68 | Ga0496108_0701880 | 3300048911 | Bacteria | 877 |
| 69 | Ga0496109_0022888 | 3300048912 | Bacteria | 5538 |
| 70 | Ga0496110_0113464 | 3300048913 | Bacteria | 2437 |
| 71 | Ga0496111_0013028 | 3300048914 | Bacteria | 5645 |
| 72 | Ga0496112_0316458 | 3300048915 | Bacteria | 1505 |
| 73 | Ga0496113_0011890 | 3300048916 | Bacteria | 5833 |
| 74 | Ga0496113_0138722 | 3300048916 | Bacteria | 1912 |
| 75 | Ga0496114_0014564 | 3300048917 | Bacteria | 6317 |
| 76 | Ga0496114_0202533 | 3300048917 | Bacteria | 1739 |
| 77 | Ga0496115_0010422 | 3300048918 | Bacteria | 6944 |
| 78 | Ga0496115_0109527 | 3300048918 | Bacteria | 2268 |
| 79 | Ga0496117_0001188 | 3300048920 | Bacteria | 39155 |
| 80 | Ga0496117_0001743 | 3300048920 | Bacteria | 30010 |
| 81 | Ga0496117_0023259 | 3300048920 | Bacteria | 4945 |
| 82 | Ga0496117_0109895 | 3300048920 | Bacteria | 1720 |
| 83 | Ga0496118_0019713 | 3300048921 | Bacteria | 6016 |
| 84 | Ga0496118_0045833 | 3300048921 | Bacteria | 3407 |
| 85 | Ga0496118_0050005 | 3300048921 | Bacteria | 3213 |
| 86 | Ga0496119_0003102 | 3300048922 | Bacteria | 17539 |
| 87 | Ga0496119_0015395 | 3300048922 | Bacteria | 5893 |
| 88 | Ga0496119_0071169 | 3300048922 | Bacteria | 2037 |
| 89 | Ga0496120_0001547 | 3300048923 | Bacteria | 26928 |
| 90 | Ga0496120_0018361 | 3300048923 | Bacteria | 4511 |
| 91 | Ga0496122_0000948 | 3300048925 | Bacteria | 52491 |
| 92 | Ga0496122_0035782 | 3300048925 | Bacteria | 4031 |
| 93 | Ga0496122_0056788 | 3300048925 | Bacteria | 2914 |
| 94 | Ga0496122_0287957 | 3300048925 | Bacteria | 894 |
| 95 | Ga0496122_0427346 | 3300048925 | Bacteria | 664 |
| 96 | Ga0496123_0000169 | 3300048926 | Bacteria | 130983 |
| 97 | Ga0496123_0141809 | 3300048926 | Bacteria | 1312 |
| 98 | Ga0496123_0148607 | 3300048926 | Bacteria | 1268 |
| 99 | Ga0496124_0016125 | 3300048927 | Bacteria | 7127 |
| 100 | Ga0496124_0613760 | 3300048927 | Bacteria | 705 |
| 101 | Ga0496124_0757652 | 3300048927 | Bacteria | 607 |
| 102 | Ga0496125_0004022 | 3300048928 | Bacteria | 17256 |
| 103 | Ga0496125_0046258 | 3300048928 | Bacteria | 3652 |
| 104 | Ga0496125_0063948 | 3300048928 | Bacteria | 2929 |
| 105 | Ga0496125_0091205 | 3300048928 | Bacteria | 2284 |
| 106 | Ga0496125_0147325 | 3300048928 | Bacteria | 1624 |
| 107 | Ga0496125_0317383 | 3300048928 | Bacteria | 946 |
| 108 | Ga0496126_0011010 | 3300048929 | Bacteria | 9409 |
| 109 | Ga0496126_0093458 | 3300048929 | Bacteria | 2641 |
| 110 | Ga0496126_0100824 | 3300048929 | Bacteria | 2526 |
| 111 | Ga0496126_0102884 | 3300048929 | Bacteria | 2496 |
| 112 | Ga0496126_0160941 | 3300048929 | Bacteria | 1918 |
| 113 | Ga0496126_0247932 | 3300048929 | Bacteria | 1485 |
| 114 | Ga0496126_0493971 | 3300048929 | Bacteria | 979 |
| 115 | Ga0501034_0000909 | 3300049571 | Bacteria | 43164 |
| 116 | Ga0501038_0003027 | 3300049574 | Bacteria | 15678 |
| 117 | Ga0501038_0006708 | 3300049574 | Bacteria | 10640 |
| 118 | Ga0501070_0002782 | 3300049586 | Bacteria | 15266 |
| 119 | nmdc:mga03n38_37786_c1 | 3300050490 | Bacteria | 2085 |
| 120 | nmdc:mga00v17_100695_c1 | 3300050491 | Bacteria | 1823 |
| 121 | nmdc:mga00v17_135618_c1 | 3300050491 | Bacteria | 685 |
| 122 | nmdc:mga00v17_2907_c1 | 3300050491 | Bacteria | 8784 |
| 123 | nmdc:mga0yw44_11754_c1 | 3300050492 | Bacteria | 4537 |
| 124 | nmdc:mga0yw44_448073_c1 | 3300050492 | Bacteria | 875 |
| 125 | nmdc:mga0sz30_336375_c1 | 3300050516 | Bacteria | 674 |
| 126 | nmdc:mga0sz30_548574_c1 | 3300050516 | Bacteria | 521 |
| 127 | Ga0500593_172952 | 3300053117 | Bacteria | 811 |
| 128 | Ga0587084_042264 | 3300059477 | Bacteria | 779 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046515 | Ga0495620_0194727 | Ga0495620_0194727_75_491 | 129 |
| 2 | iso_pu_bacteria | 2808606447 | 2809226867 | 129 |
| 3 | iso_pu_bacteria | 2852632344 | 2852633087 | 129 |
| 4 | 3300048920 | Ga0496117_0001743 | Ga0496117_0001743_13003_13425 | 132 |
| 5 | 3300048922 | Ga0496119_0003102 | Ga0496119_0003102_3102_3524 | 132 |
| 6 | 3300048923 | Ga0496120_0018361 | Ga0496120_0018361_330_752 | 132 |
| 7 | 3300048925 | Ga0496122_0000948 | Ga0496122_0000948_23688_24110 | 132 |
| 8 | 3300048926 | Ga0496123_0000169 | Ga0496123_0000169_84056_84478 | 132 |
| 9 | 3300048927 | Ga0496124_0016125 | Ga0496124_0016125_5640_6062 | 132 |
| 10 | 3300048928 | Ga0496125_0063948 | Ga0496125_0063948_557_979 | 132 |
| 11 | 3300048929 | Ga0496126_0011010 | Ga0496126_0011010_5959_6381 | 132 |
| 12 | 3300031824 | Ga0307413_10304059 | Ga0307413_103040592 | 137 |
| 13 | 3300002738 | JGI25154J39366_1001941 | JGI25154J39366_10019417 | 139 |
| 14 | 3300025246 | Ga0209646_1000134 | Ga0209646_100013494 | 139 |
| 15 | 3300049574 | Ga0501038_0003027 | Ga0501038_0003027_828_1310 | 139 |
| 16 | 3300059477 | Ga0587084_042264 | Ga0587084_042264_99_581 | 139 |
| 17 | iso_pu_bacteria | 2643221553 | 2643785327 | 140 |
| 18 | iso_pu_bacteria | 2643221724 | 2644679664 | 140 |
| 19 | iso_pu_bacteria | 2728369380 | 2730229174 | 140 |
| 20 | iso_pu_bacteria | 2747842429 | 2747954219 | 140 |
| 21 | iso_pu_bacteria | 2852646457 | 2852646917 | 140 |
| 22 | iso_pu_bacteria | 2857723135 | 2857723363 | 140 |
| 23 | iso_pu_bacteria | 2945968032 | 2945971368 | 140 |
| 24 | iso_pu_bacteria | 2946033335 | 2946034228 | 140 |
| 25 | iso_pu_bacteria | 2946041624 | 2946043699 | 140 |
| 26 | iso_pu_bacteria | 2946080515 | 2946081386 | 140 |
| 27 | 3300009545 | Ga0105237_10067496 | Ga0105237_100674962 | 141 |
| 28 | 3300013105 | Ga0157369_10214116 | Ga0157369_102141163 | 141 |
| 29 | 3300013306 | Ga0163162_10028888 | Ga0163162_100288882 | 141 |
| 30 | 3300013307 | Ga0157372_10243662 | Ga0157372_102436623 | 141 |
| 31 | 3300048903 | Ga0496100_0004189 | Ga0496100_0004189_4684_5109 | 141 |
| 32 | 3300048905 | Ga0496102_0032638 | Ga0496102_0032638_1949_2374 | 141 |
| 33 | 3300048906 | Ga0496103_0011344 | Ga0496103_0011344_1404_1829 | 141 |
| 34 | 3300048907 | Ga0496104_0834106 | Ga0496104_0834106_299_724 | 141 |
| 35 | 3300048908 | Ga0496105_0374086 | Ga0496105_0374086_411_836 | 141 |
| 36 | 3300048910 | Ga0496107_0004498 | Ga0496107_0004498_4034_4459 | 141 |
| 37 | 3300048911 | Ga0496108_0701880 | Ga0496108_0701880_211_636 | 141 |
| 38 | 3300048912 | Ga0496109_0022888 | Ga0496109_0022888_5000_5425 | 141 |
| 39 | 3300048913 | Ga0496110_0113464 | Ga0496110_0113464_1832_2257 | 141 |
| 40 | 3300048914 | Ga0496111_0013028 | Ga0496111_0013028_4985_5410 | 141 |
| 41 | 3300048915 | Ga0496112_0316458 | Ga0496112_0316458_209_634 | 141 |
| 42 | 3300048916 | Ga0496113_0011890 | Ga0496113_0011890_2141_2566 | 141 |
| 43 | 3300048917 | Ga0496114_0014564 | Ga0496114_0014564_618_1043 | 141 |
| 44 | 3300048917 | Ga0496114_0202533 | Ga0496114_0202533_176_601 | 141 |
| 45 | 3300048918 | Ga0496115_0010422 | Ga0496115_0010422_5345_5770 | 141 |
| 46 | 3300048904 | Ga0496101_0159687 | Ga0496101_0159687_893_1342 | 142 |
| 47 | 3300048906 | Ga0496103_0053759 | Ga0496103_0053759_601_1050 | 142 |
| 48 | 3300048907 | Ga0496104_0036857 | Ga0496104_0036857_1034_1483 | 142 |
| 49 | 3300048922 | Ga0496119_0071169 | Ga0496119_0071169_1543_2010 | 142 |
| 50 | iso_pu_bacteria | 2643221542 | 2643734140 | 142 |
| 51 | iso_pu_bacteria | 2643221630 | 2644170726 | 142 |
| 52 | iso_pu_bacteria | 2852663356 | 2852664747 | 142 |
| 53 | iso_pu_bacteria | 8004182704 | 8004185591 | 142 |
| 54 | 3300003320 | rootH2_10104023 | rootH2_101040233 | 144 |
| 55 | 3300006048 | Ga0075363_100572879 | Ga0075363_1005728792 | 144 |
| 56 | 3300006051 | Ga0075364_10016761 | Ga0075364_100167616 | 144 |
| 57 | 3300006051 | Ga0075364_10056497 | Ga0075364_100564973 | 144 |
| 58 | 3300006051 | Ga0075364_10218781 | Ga0075364_102187813 | 144 |
| 59 | 3300006051 | Ga0075364_10275758 | Ga0075364_102757582 | 144 |
| 60 | 3300031901 | Ga0307406_10000955 | Ga0307406_1000095512 | 144 |
| 61 | 3300031901 | Ga0307406_10010693 | Ga0307406_100106933 | 144 |
| 62 | 3300031901 | Ga0307406_10363888 | Ga0307406_103638881 | 144 |
| 63 | 3300031911 | Ga0307412_10139725 | Ga0307412_101397252 | 144 |
| 64 | 3300032004 | Ga0307414_10004620 | Ga0307414_100046202 | 144 |
| 65 | 3300032004 | Ga0307414_10139509 | Ga0307414_101395093 | 144 |
| 66 | 3300041451 | Ga0451791_0642209 | Ga0451791_0642209_28_483 | 144 |
| 67 | 3300041494 | Ga0451837_0271138 | Ga0451837_0271138_165_608 | 144 |
| 68 | 3300041498 | Ga0451841_1278020 | Ga0451841_1278020_70_507 | 144 |
| 69 | 3300041509 | Ga0451843_0777373 | Ga0451843_0777373_85_522 | 144 |
| 70 | 3300041511 | Ga0451855_1970166 | Ga0451855_1970166_255_692 | 144 |
| 71 | 3300041512 | Ga0451853_0838337 | Ga0451853_0838337_112_570 | 144 |
| 72 | 3300048920 | Ga0496117_0001188 | Ga0496117_0001188_31606_32043 | 144 |
| 73 | 3300048920 | Ga0496117_0109895 | Ga0496117_0109895_601_1038 | 144 |
| 74 | 3300048921 | Ga0496118_0045833 | Ga0496118_0045833_1471_1908 | 144 |
| 75 | 3300048925 | Ga0496122_0035782 | Ga0496122_0035782_3201_3638 | 144 |
| 76 | 3300048925 | Ga0496122_0427346 | Ga0496122_0427346_112_549 | 144 |
| 77 | 3300048926 | Ga0496123_0148607 | Ga0496123_0148607_220_657 | 144 |
| 78 | 3300048927 | Ga0496124_0613760 | Ga0496124_0613760_188_625 | 144 |
| 79 | 3300048928 | Ga0496125_0004022 | Ga0496125_0004022_13779_14216 | 144 |
| 80 | 3300048928 | Ga0496125_0046258 | Ga0496125_0046258_2357_2794 | 144 |
| 81 | 3300048928 | Ga0496125_0147325 | Ga0496125_0147325_974_1411 | 144 |
| 82 | 3300048929 | Ga0496126_0100824 | Ga0496126_0100824_411_848 | 144 |
| 83 | 3300048929 | Ga0496126_0102884 | Ga0496126_0102884_1228_1665 | 144 |
| 84 | 3300048929 | Ga0496126_0160941 | Ga0496126_0160941_640_1077 | 144 |
| 85 | 3300048929 | Ga0496126_0247932 | Ga0496126_0247932_836_1315 | 144 |
| 86 | 3300049571 | Ga0501034_0000909 | Ga0501034_0000909_7733_8194 | 144 |
| 87 | 3300049574 | Ga0501038_0006708 | Ga0501038_0006708_3493_3933 | 144 |
| 88 | 3300050491 | nmdc:mga00v17_100695_c1 | nmdc:mga00v17_100695_c1_1206_1643 | 144 |
| 89 | 3300050491 | nmdc:mga00v17_135618_c1 | nmdc:mga00v17_135618_c1_226_663 | 144 |
| 90 | 3300050491 | nmdc:mga00v17_2907_c1 | nmdc:mga00v17_2907_c1_7924_8361 | 144 |
| 91 | iso_pu_bacteria | 2870628048 | 2870629769 | 144 |
| 92 | iso_pu_bacteria | 2919395869 | 2919396876 | 144 |
| 93 | iso_pu_bacteria | 8004212874 | 8004214632 | 144 |
| 94 | iso_pu_bacteria | 2585428157 | 2588106704 | 145 |
| 95 | 3300046453 | Ga0495627_000588 | Ga0495627_000588_16012_16455 | 146 |
| 96 | 3300048928 | Ga0496125_0317383 | Ga0496125_0317383_270_713 | 146 |
| 97 | 3300048929 | Ga0496126_0493971 | Ga0496126_0493971_238_681 | 146 |
| 98 | iso_pu_bacteria | 2643221566 | 2643849416 | 146 |
| 99 | iso_pu_bacteria | 2643221597 | 2643996404 | 146 |
| 100 | iso_pu_bacteria | 2757320536 | 2758224393 | 146 |
| 101 | iso_pu_bacteria | 2808606306 | 2808631704 | 146 |
| 102 | iso_pu_bacteria | 2811994872 | 2812322484 | 146 |
| 103 | iso_pu_bacteria | 2928090899 | 2928091231 | 146 |
| 104 | iso_pu_bacteria | 8016254467 | 8016254666 | 146 |
| 105 | iso_pu_bacteria | 8045830549 | 8045832680 | 146 |
| 106 | 3300003578 | Ga0006562J51391_1056185 | Ga0006562J51391_10561855 | 148 |
| 107 | 3300006038 | Ga0075365_10002202 | Ga0075365_100022024 | 148 |
| 108 | 3300006048 | Ga0075363_100015615 | Ga0075363_1000156154 | 148 |
| 109 | 3300006051 | Ga0075364_10299303 | Ga0075364_102993031 | 148 |
| 110 | 3300006178 | Ga0075367_10009449 | Ga0075367_100094495 | 148 |
| 111 | 3300009036 | Ga0105244_10162712 | Ga0105244_101627122 | 148 |
| 112 | 3300009148 | Ga0105243_10031728 | Ga0105243_100317283 | 148 |
| 113 | 3300025728 | Ga0207655_1047905 | Ga0207655_10479053 | 148 |
| 114 | 3300025728 | Ga0207655_1090762 | Ga0207655_10907622 | 148 |
| 115 | 3300025935 | Ga0207709_10015922 | Ga0207709_100159225 | 148 |
| 116 | 3300031901 | Ga0307406_10000025 | Ga0307406_1000002548 | 148 |
| 117 | 3300046519 | Ga0495632_0346357 | Ga0495632_0346357_133_585 | 148 |
| 118 | 3300046524 | Ga0495648_0489416 | Ga0495648_0489416_35_493 | 148 |
| 119 | 3300050490 | nmdc:mga03n38_37786_c1 | nmdc:mga03n38_37786_c1_52_516 | 148 |
| 120 | 3300050492 | nmdc:mga0yw44_11754_c1 | nmdc:mga0yw44_11754_c1_3141_3605 | 148 |
| 121 | 3300050516 | nmdc:mga0sz30_548574_c1 | nmdc:mga0sz30_548574_c1_27_491 | 148 |
| 122 | 3300053117 | Ga0500593_172952 | Ga0500593_172952_80_568 | 148 |
| 123 | 3300006186 | Ga0075369_10080060 | Ga0075369_100800603 | 149 |
| 124 | 3300048921 | Ga0496118_0050005 | Ga0496118_0050005_479_952 | 149 |
| 125 | 3300050492 | nmdc:mga0yw44_448073_c1 | nmdc:mga0yw44_448073_c1_347_802 | 149 |
| 126 | 3300050516 | nmdc:mga0sz30_336375_c1 | nmdc:mga0sz30_336375_c1_178_633 | 149 |
| 127 | 3300013250 | Ga0171462_1001 | Ga0171462_1001222 | 150 |
| 128 | 3300020081 | Ga0206354_10327087 | Ga0206354_103270872 | 150 |
| 129 | 3300026121 | Ga0207683_11585008 | Ga0207683_115850082 | 150 |
| 130 | 3300031901 | Ga0307406_10028886 | Ga0307406_100288864 | 150 |
| 131 | 3300031901 | Ga0307406_11261022 | Ga0307406_112610221 | 150 |
| 132 | 3300031995 | Ga0307409_101011163 | Ga0307409_1010111632 | 150 |
| 133 | 3300032002 | Ga0307416_100309625 | Ga0307416_1003096252 | 150 |
| 134 | 3300032004 | Ga0307414_10558651 | Ga0307414_105586511 | 150 |
| 135 | 3300041512 | Ga0451853_2361289 | Ga0451853_2361289_27_530 | 150 |
| 136 | 3300044683 | Ga0466965_0140756 | Ga0466965_0140756_513_971 | 150 |
| 137 | 3300044901 | Ga0466960_0595029 | Ga0466960_0595029_117_581 | 150 |
| 138 | 3300048907 | Ga0496104_0241629 | Ga0496104_0241629_1135_1611 | 150 |
| 139 | 3300048908 | Ga0496105_0123504 | Ga0496105_0123504_901_1377 | 150 |
| 140 | 3300048916 | Ga0496113_0138722 | Ga0496113_0138722_553_1029 | 150 |
| 141 | 3300048918 | Ga0496115_0109527 | Ga0496115_0109527_542_1018 | 150 |
| 142 | 3300048920 | Ga0496117_0023259 | Ga0496117_0023259_637_1092 | 150 |
| 143 | 3300048921 | Ga0496118_0019713 | Ga0496118_0019713_157_612 | 150 |
| 144 | 3300048922 | Ga0496119_0015395 | Ga0496119_0015395_3317_3775 | 150 |
| 145 | 3300048923 | Ga0496120_0001547 | Ga0496120_0001547_17596_18051 | 150 |
| 146 | 3300048925 | Ga0496122_0056788 | Ga0496122_0056788_1095_1550 | 150 |
| 147 | 3300048925 | Ga0496122_0287957 | Ga0496122_0287957_375_833 | 150 |
| 148 | 3300048926 | Ga0496123_0141809 | Ga0496123_0141809_746_1201 | 150 |
| 149 | 3300048927 | Ga0496124_0757652 | Ga0496124_0757652_67_522 | 150 |
| 150 | 3300048928 | Ga0496125_0091205 | Ga0496125_0091205_189_644 | 150 |
| 151 | 3300048929 | Ga0496126_0093458 | Ga0496126_0093458_2148_2603 | 150 |
| 152 | 3300049586 | Ga0501070_0002782 | Ga0501070_0002782_13374_13832 | 150 |
| 153 | 3300001979 | JGI24740J21852_10017451 | JGI24740J21852_100174514 | 151 |
| 154 | 3300044765 | Ga0466970_0000835 | Ga0466970_0000835_3639_4094 | 151 |
| 155 | 3300044842 | Ga0466957_0024556 | Ga0466957_0024556_640_1095 | 151 |
| 156 | 3300045976 | Ga0466967_0084466 | Ga0466967_0084466_1726_2181 | 151 |
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5fsx-assembly2.cif.gz_B | crystal structure of trypanosoma brucei macrodomain in complex with adp | 0.5071 | 90 | 114 |
| 3ejg-assembly1.cif.gz_A | crystal structure of hcov-229e x-domain | 0.4418 | 84 | 111 |
| 3dti-assembly1.cif.gz_A | crystal structure of the irre protein, a central regulator of dna damage repair in deinococcaceae | 0.4127 | 43 | 143 |
| 7xyo-assembly1.cif.gz_A | crystal structure of a m61 aminopeptidase family member from myxococcus fulvus | 0.307 | 42 | 149 |
| 3dti-assembly1.cif.gz_A | crystal structure of the irre protein, a central regulator of dna damage repair in deinococcaceae | 0.3012 | 43 | 143 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 5fsxB00 | Alpha Beta;3-Layer(aba) Sandwich;Leucine Aminopeptidase, subunit E; domain 1;Leucine Aminopeptidase, subunit E, domain 1 | 0.5071 | 90 | 114 | 3.40.220.10 |
| af_A0A1D6MR53_300_613_3.90.550.10 | Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.5047 | 89 | 113 | 3.90.550.10 |
| 3dtiA01 | Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; | 0.4422 | 43 | 148 | 1.10.10.2910 |
| 3ejgA00 | Alpha Beta;3-Layer(aba) Sandwich;Leucine Aminopeptidase, subunit E; domain 1;Leucine Aminopeptidase, subunit E, domain 1 | 0.4418 | 84 | 111 | 3.40.220.10 |
| af_A0A1Q0XTP9_219_321_3.30.2010.30 | Alpha Beta;2-Layer Sandwich;Zincin-like; | 0.4041 | 71 | 114 | 3.30.2010.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A7D8AA05-F1-model_v4 | Fe-S oxidoreductase | 0.9499 | 12 | 150 |
|
| AF-A0A0B2AB96-F1-model_v4 | Fe-S oxidoreductase | 0.947 | 27 | 148 |
|
| AF-A0A653MW37-F1-model_v4 | Fe-S oxidoreductase | 0.9465 | 1 | 151 |
|
| AF-A0A259SH14-F1-model_v4 | Fe-S oxidoreductase | 0.9448 | 20 | 151 |
|
| AF-A0A368L2M0-F1-model_v4 | Fe-S oxidoreductase | 0.9448 | 16 | 149 |
|
Predicted Structure (AlphaFold2)
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