F224765

General Info

Members Datasets Scaffolds Average Seq Length
156 120 312 192

Family's Representative Sequence

Representative Sequence 3300009174|Ga0105241_10245127|Ga0105241_102451272
Length 220
Sequence MSEQKRKRITESAVELHGSLGPARTSMSAVAERAGVRRSTLYRHFPDEAALFGACSVHWAERNPPPDISRWEQIEDPAERLAVALGEMYAYYRGAGGMIDKLLRDEQTVPVVAEKFAPYHQFLTIAGEILIRGRGLRGNAAKRTRAAIGHALAFRTWQDLTEVQGLSDSQAVELMSRSVASAGWKDEWLQALASSAGCAPYLKDGADFVEDLRRAEAGRS

Samples

Sample ID Description Type Environment
1 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
29 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
38 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
39 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
41 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
46 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
75 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
76 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
79 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
82 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
83 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
84 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
85 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
86 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
87 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
88 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
89 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
90 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
93 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
94 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
95 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
96 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
97 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
98 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
99 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
104 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
105 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
106 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
107 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
108 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
112 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
113 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
114 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
115 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
116 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
117 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
118 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
119 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
120 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 8.33
Rhizosphere 91.67
Stem 0
Stem Tuber 0
Unclassified 14.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105241_10245127 3300009174 Bacteria 1517
2 Ga0070658_10032020 3300005327 Bacteria 4227
3 Ga0070683_100010025 3300005329 Bacteria 8125
4 Ga0070670_100837508 3300005331 Unclassified 832
5 Ga0070666_10032011 3300005335 Bacteria 3473
6 Ga0070682_100000057 3300005337 Bacteria 108832
7 Ga0068868_100000864 3300005338 Bacteria 20513
8 Ga0068868_100033095 3300005338 Bacteria 3983
9 Ga0070689_100313257 3300005340 Bacteria 1309
10 Ga0070661_100000031 3300005344 Bacteria 113816
11 Ga0070692_10404313 3300005345 Unclassified 863
12 Ga0070675_100000015 3300005354 Bacteria 201080
13 Ga0070688_100000117 3300005365 Bacteria 41642
14 Ga0070709_10246685 3300005434 Bacteria 1285
15 Ga0070711_100071085 3300005439 Bacteria 2451
16 Ga0070711_100247477 3300005439 Unclassified 1397
17 Ga0070711_100525390 3300005439 Bacteria 979
18 Ga0070678_100089804 3300005456 Bacteria 2353
19 Ga0070662_100000005 3300005457 Bacteria 183056
20 Ga0070685_10003357 3300005466 Bacteria 8146
21 Ga0070685_10116756 3300005466 Bacteria 1652
22 Ga0070699_100047425 3300005518 Bacteria 3718
23 Ga0070684_100873152 3300005535 Unclassified 842
24 Ga0070672_100000007 3300005543 Bacteria 104699
25 Ga0070686_100422276 3300005544 Unclassified 1019
26 Ga0070665_100027201 3300005548 Bacteria 5760
27 Ga0068855_100180080 3300005563 Unclassified 2390
28 Ga0070664_100025408 3300005564 Bacteria 4909
29 Ga0070664_100044549 3300005564 Bacteria 3747
30 Ga0068857_101065004 3300005577 Bacteria 780
31 Ga0068854_100019755 3300005578 Bacteria 4547
32 Ga0068856_100209938 3300005614 Bacteria 1962
33 Ga0068852_100136893 3300005616 Unclassified 2262
34 Ga0068866_10640733 3300005718 Bacteria 722
35 Ga0068861_100283669 3300005719 Bacteria 1427
36 Ga0068851_10005544 3300005834 Bacteria 5720
37 Ga0068870_10181495 3300005840 Bacteria 1264
38 Ga0068858_100043666 3300005842 Bacteria 4156
39 Ga0070717_10046887 3300006028 Bacteria 3538
40 Ga0075433_10316139 3300006852 Bacteria 1382
41 Ga0075433_10367741 3300006852 Bacteria 1270
42 Ga0075434_100020776 3300006871 Bacteria 6373
43 Ga0075434_101164979 3300006871 Bacteria 783
44 Ga0075436_100273832 3300006914 Unclassified 1206
45 Ga0075435_100031092 3300007076 Bacteria 4203
46 Ga0075435_100275868 3300007076 Bacteria 1435
47 Ga0111539_10666230 3300009094 Bacteria 1212
48 Ga0105245_10000340 3300009098 Bacteria 44025
49 Ga0105245_10001556 3300009098 Bacteria 20821
50 Ga0114129_10609269 3300009147 Bacteria 1414
51 Ga0114129_10646367 3300009147 Unclassified 1366
52 Ga0105241_10175827 3300009174 Bacteria 1772
53 Ga0105241_10450422 3300009174 Bacteria 1138
54 Ga0105246_10181409 3300011119 Bacteria 1621
55 Ga0157378_10014750 3300013297 Bacteria 6847
56 Ga0157378_10061765 3300013297 Bacteria 3345
57 Ga0157378_10331982 3300013297 Bacteria 1480
58 Ga0157375_10174159 3300013308 Bacteria 2301
59 Ga0157380_10578452 3300014326 Unclassified 1107
60 Ga0157380_10717929 3300014326 Bacteria 1007
61 Ga0207656_10001292 3300025321 Bacteria 8231
62 Ga0207656_10005577 3300025321 Bacteria 4461
63 Ga0207692_10575033 3300025898 Unclassified 722
64 Ga0207642_10078756 3300025899 Bacteria 1594
65 Ga0207680_10022953 3300025903 Bacteria 3400
66 Ga0207643_10165099 3300025908 Bacteria 1334
67 Ga0207705_10050875 3300025909 Bacteria 2983
68 Ga0207663_10085805 3300025916 Unclassified 2074
69 Ga0207649_10000021 3300025920 Bacteria 209660
70 Ga0207650_10739619 3300025925 Unclassified 832
71 Ga0207659_10000094 3300025926 Bacteria 51695
72 Ga0207687_10000012 3300025927 Bacteria 370729
73 Ga0207687_10000352 3300025927 Bacteria 30585
74 Ga0207706_10000006 3300025933 Bacteria 216994
75 Ga0207704_10000012 3300025938 Bacteria 178319
76 Ga0207665_10020203 3300025939 Bacteria 4376
77 Ga0207691_10000140 3300025940 Bacteria 66462
78 Ga0207711_10092125 3300025941 Bacteria 2667
79 Ga0207711_10183459 3300025941 Bacteria 1904
80 Ga0207661_10010815 3300025944 Bacteria 6582
81 Ga0207679_10013139 3300025945 Bacteria 5423
82 Ga0207679_10028244 3300025945 Bacteria 3890
83 Ga0207712_10368316 3300025961 Bacteria 1199
84 Ga0207640_10029594 3300025981 Bacteria 3364
85 Ga0207677_10000540 3300026023 Bacteria 23890
86 Ga0207677_10000760 3300026023 Bacteria 18586
87 Ga0207703_10103364 3300026035 Bacteria 2418
88 Ga0207702_10005392 3300026078 Bacteria 11203
89 Ga0207674_11059429 3300026116 Bacteria 780
90 Ga0207675_100204328 3300026118 Unclassified 1898
91 Ga0207683_10028957 3300026121 Bacteria 4793
92 Ga0207698_10059109 3300026142 Bacteria 2975
93 Ga0268266_10003445 3300028379 Bacteria 15772
94 Ga0268266_10484079 3300028379 Unclassified 1180
95 Ga0307415_100010374 3300032126 Bacteria 5274
96 Ga0395900_0051857 3300037418 Bacteria 4225
97 Ga0395905_0239149 3300037471 Unclassified 1697
98 Ga0395901_0015447 3300038443 Bacteria 7775
99 Ga0395901_1141806 3300038443 Bacteria 748
100 Ga0466965_0545548 3300044683 Bacteria 654
101 Ga0466958_0051748 3300045836 Bacteria 2487
102 Ga0466958_0296725 3300045836 Bacteria 1037
103 Ga0466967_0132218 3300045976 Bacteria 2317
104 Ga0495603_0045943 3300046455 Bacteria 2603
105 Ga0495638_0076502 3300046460 Bacteria 2039
106 Ga0495641_0020744 3300046461 Bacteria 3322
107 Ga0495641_0026748 3300046461 Bacteria 2812
108 Ga0495639_0165197 3300046475 Unclassified 1073
109 Ga0495610_0039653 3300046512 Unclassified 2380
110 Ga0495628_0321046 3300046516 Bacteria 1143
111 Ga0495628_0604559 3300046516 Bacteria 783
112 Ga0495630_0000007 3300046517 Bacteria 376915
113 Ga0495630_0401837 3300046517 Bacteria 1050
114 Ga0495630_0405333 3300046517 Bacteria 1045
115 Ga0495630_0434107 3300046517 Bacteria 1006
116 Ga0495652_0001430 3300046529 Bacteria 26465
117 Ga0495587_0015796 3300046536 Bacteria 4706
118 Ga0495645_0009131 3300046543 Bacteria 6926
119 Ga0495634_0278739 3300046642 Bacteria 1016
120 Ga0495588_0000602 3300046674 Bacteria 16922
121 Ga0495599_0086456 3300046678 Bacteria 1958
122 Ga0495647_0000343 3300046681 Bacteria 13108
123 Ga0495658_0192997 3300046683 Bacteria 1267
124 Ga0495600_0004895 3300046809 Bacteria 8045
125 Ga0495674_0031008 3300047319 Bacteria 4859
126 Ga0495674_0207179 3300047319 Bacteria 1625
127 Ga0495676_0056755 3300047321 Bacteria 3094
128 Ga0495593_0091915 3300047673 Bacteria 1562
129 Ga0496102_0049945 3300048905 Bacteria 3807
130 Ga0496104_0495363 3300048907 Bacteria 1133
131 Ga0496105_0712536 3300048908 Unclassified 769
132 Ga0496108_0742478 3300048911 Bacteria 849
133 Ga0496109_0003437 3300048912 Bacteria 13226
134 Ga0496110_0259682 3300048913 Bacteria 1581
135 Ga0496110_0356398 3300048913 Bacteria 1333
136 Ga0496111_0165679 3300048914 Bacteria 1641
137 Ga0496112_0007885 3300048915 Bacteria 9485
138 Ga0496112_0340990 3300048915 Bacteria 1442
139 Ga0496113_0003935 3300048916 Bacteria 9012
140 Ga0496114_0223247 3300048917 Unclassified 1654
141 Ga0496115_0000209 3300048918 Bacteria 54079
142 Ga0501069_0016578 3300049585 Bacteria 3959
143 nmdc:mga05p37_140459_c1 3300050507 Bacteria 2959
144 nmdc:mga05p37_8821_c1 3300050507 Bacteria 11913
145 nmdc:mga08y16_1149450_c1 3300050511 Bacteria 749
146 nmdc:mga0n895_18977_c1 3300050512 Bacteria 6379
147 nmdc:mga0n895_833295_c1 3300050512 Bacteria 911
148 nmdc:mga0rr50_5913_c1 3300050513 Bacteria 7363
149 nmdc:mga08x19_30032_c1 3300050514 Unclassified 3412
150 nmdc:mga08x19_414901_c1 3300050514 Unclassified 945
151 nmdc:mga0a205_315815_c1 3300050515 Bacteria 1434
152 nmdc:mga0a205_611185_c1 3300050515 Bacteria 943
153 Ga0495601_0019676 3300053077 Bacteria 4119
154 Ga0495619_0000479 3300053085 Bacteria 26801
155 Ga0495619_0542456 3300053085 Bacteria 798
156 Ga0530510_0359415 3300061734 Bacteria 1094
157 Ga0105241_10245127
158 Ga0070658_10032020
159 Ga0070683_100010025
160 Ga0070670_100837508
161 Ga0070666_10032011
162 Ga0070682_100000057
163 Ga0068868_100000864
164 Ga0068868_100033095
165 Ga0070689_100313257
166 Ga0070661_100000031
167 Ga0070692_10404313
168 Ga0070675_100000015
169 Ga0070688_100000117
170 Ga0070709_10246685
171 Ga0070711_100071085
172 Ga0070711_100247477
173 Ga0070711_100525390
174 Ga0070678_100089804
175 Ga0070662_100000005
176 Ga0070685_10003357
177 Ga0070685_10116756
178 Ga0070699_100047425
179 Ga0070684_100873152
180 Ga0070672_100000007
181 Ga0070686_100422276
182 Ga0070665_100027201
183 Ga0068855_100180080
184 Ga0070664_100025408
185 Ga0070664_100044549
186 Ga0068857_101065004
187 Ga0068854_100019755
188 Ga0068856_100209938
189 Ga0068852_100136893
190 Ga0068866_10640733
191 Ga0068861_100283669
192 Ga0068851_10005544
193 Ga0068870_10181495
194 Ga0068858_100043666
195 Ga0070717_10046887
196 Ga0075433_10316139
197 Ga0075433_10367741
198 Ga0075434_100020776
199 Ga0075434_101164979
200 Ga0075436_100273832
201 Ga0075435_100031092
202 Ga0075435_100275868
203 Ga0111539_10666230
204 Ga0105245_10000340
205 Ga0105245_10001556
206 Ga0114129_10609269
207 Ga0114129_10646367
208 Ga0105241_10175827
209 Ga0105241_10450422
210 Ga0105246_10181409
211 Ga0157378_10014750
212 Ga0157378_10061765
213 Ga0157378_10331982
214 Ga0157375_10174159
215 Ga0157380_10578452
216 Ga0157380_10717929
217 Ga0207656_10001292
218 Ga0207656_10005577
219 Ga0207692_10575033
220 Ga0207642_10078756
221 Ga0207680_10022953
222 Ga0207643_10165099
223 Ga0207705_10050875
224 Ga0207663_10085805
225 Ga0207649_10000021
226 Ga0207650_10739619
227 Ga0207659_10000094
228 Ga0207687_10000012
229 Ga0207687_10000352
230 Ga0207706_10000006
231 Ga0207704_10000012
232 Ga0207665_10020203
233 Ga0207691_10000140
234 Ga0207711_10092125
235 Ga0207711_10183459
236 Ga0207661_10010815
237 Ga0207679_10013139
238 Ga0207679_10028244
239 Ga0207712_10368316
240 Ga0207640_10029594
241 Ga0207677_10000540
242 Ga0207677_10000760
243 Ga0207703_10103364
244 Ga0207702_10005392
245 Ga0207674_11059429
246 Ga0207675_100204328
247 Ga0207683_10028957
248 Ga0207698_10059109
249 Ga0268266_10003445
250 Ga0268266_10484079
251 Ga0307415_100010374
252 Ga0395900_0051857
253 Ga0395905_0239149
254 Ga0395901_0015447
255 Ga0395901_1141806
256 Ga0466965_0545548
257 Ga0466958_0051748
258 Ga0466958_0296725
259 Ga0466967_0132218
260 Ga0495603_0045943
261 Ga0495638_0076502
262 Ga0495641_0020744
263 Ga0495641_0026748
264 Ga0495639_0165197
265 Ga0495610_0039653
266 Ga0495628_0321046
267 Ga0495628_0604559
268 Ga0495630_0000007
269 Ga0495630_0401837
270 Ga0495630_0405333
271 Ga0495630_0434107
272 Ga0495652_0001430
273 Ga0495587_0015796
274 Ga0495645_0009131
275 Ga0495634_0278739
276 Ga0495588_0000602
277 Ga0495599_0086456
278 Ga0495647_0000343
279 Ga0495658_0192997
280 Ga0495600_0004895
281 Ga0495674_0031008
282 Ga0495674_0207179
283 Ga0495676_0056755
284 Ga0495593_0091915
285 Ga0496102_0049945
286 Ga0496104_0495363
287 Ga0496105_0712536
288 Ga0496108_0742478
289 Ga0496109_0003437
290 Ga0496110_0259682
291 Ga0496110_0356398
292 Ga0496111_0165679
293 Ga0496112_0007885
294 Ga0496112_0340990
295 Ga0496113_0003935
296 Ga0496114_0223247
297 Ga0496115_0000209
298 Ga0501069_0016578
299 nmdc:mga05p37_140459_c1
300 nmdc:mga05p37_8821_c1
301 nmdc:mga08y16_1149450_c1
302 nmdc:mga0n895_18977_c1
303 nmdc:mga0n895_833295_c1
304 nmdc:mga0rr50_5913_c1
305 nmdc:mga08x19_30032_c1
306 nmdc:mga08x19_414901_c1
307 nmdc:mga0a205_315815_c1
308 nmdc:mga0a205_611185_c1
309 Ga0495601_0019676
310 Ga0495619_0000479
311 Ga0495619_0542456
312 Ga0530510_0359415

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

9

55

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
4jl3-assembly1.cif.gz_D crystal structure of ms6564-dna complex 0.7274 10 186
3dew-assembly1.cif.gz_A-2 the structure of a putative tetr family transcriptional regulator from geobacter sulfurreducens pca. 0.7219 10 187
3mvp-assembly1.cif.gz_A the crystal structure of a tetr/acrr transcriptional regulator from streptococcus mutans to 1.85a 0.7218 1 189
3f1b-assembly1.cif.gz_A-2 the crystal structure of a tetr-like transcriptional regulator from rhodococcus sp. rha1. 0.7136 10 191
3mvp-assembly1.cif.gz_A the crystal structure of a tetr/acrr transcriptional regulator from streptococcus mutans to 1.85a 0.7063 1 189
ID Description Score Start End Superfamily
3mvpB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9952 8 50 1.10.10.60
3mvpA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9929 6 50 1.10.10.60
2raeA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9759 10 51 1.10.10.60
2eh3A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9728 10 56 1.10.10.60
5k7fA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9687 11 50 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A7W1M1Q9-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9901 7 188 GO:0000976
GO:0003700
AF-A0A1Q7ULC1-F1-model_v4 HTH tetR-type domain-containing protein 0.9805 5 188 GO:0000976
GO:0003700
AF-A0A537YR10-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9802 1 187 GO:0000976
GO:0003700
AF-A0A535JEE2-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9762 5 190 GO:0000976
GO:0003700
GO:0016020
AF-A0A2V7Z643-F1-model_v4 HTH tetR-type domain-containing protein 0.9756 5 188 GO:0000976
GO:0003700

Map