F224481

General Info

Members Datasets Scaffolds Average Seq Length
156 113 156 994

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10001217|Ga0081539_1000121729
Length 1072
Sequence MHIKDTFPELYQIRRRPLSIEGVRASLKEKRGREFWQSLEELAGTREFEELLHREFPQHASEWDEGTDRRTFLKLMGASLALAGLTGCSYQPPETIVPYVRQPEEIVPGKPLFFATAMPWSGGCAPLLVRSNMGRPTKVEGNDLHPASMGAADVFAQASILGLYDPDRSETIINRGEVRTYTAFLGELATALEGQKPKQGAGLRILTETVMSPALAAQLRSVTDRFPGARWYQWEPAGANNARVGIQQALGSFATPIYNFAAADRVLSLDSNFLECGPSALRYARDFASRRRVSDGEQREVCRLYSIETTPTNTGFFADNRIPLRPSQFADFVRGIARAVGASEASLAGGASASDKETDAIAADLKAHAGACIVIAGDEQPPEIHALAHAMNVALGSLGKTVNYIEPVEERATDQLNDLRSLVADIDSGAVEVLVIVGGNPAYTTPADLRLDINRMKKAGLTVHLSLYDDETSELCQWHIPEAHYLEAWGDTRAYDGTVTITQPLIAPLYNGKSALELLAAFTEQPDRAGYEILRDYWTTQGRPWLMASGANAATATGGADFEKAWRKALHDGFVANTSRAATLISRHGELRSDSANQVQGVSAVAVQTTPFEIVFRADPSVYDGRFANNGWLQELPKPLTKLTWDNVAIISPATAEKLGVGVAPDGAVAWDSPKRVNRLTKKGGEIMAEVLTLTFKGRQVNAPVFILPGQVDDVVTVHFGYGRWRSGRVGGNEQNKTTFGFNAYNLRTSDALWFGQGLGVKVTGDEYQLASTQIHFQMEGREIVRHGTFADWQRDPTLAPERERKKEPPQPAGENRFDYSEHKEEGRRGYRWGMAIDISTCVGCNACIVACQAENNIPVVGKEQVSRSREMHWLRVDAYFRGAVEDPAGVYFMPVPCMHCENAPCEPVCPVHATVHSAEGLNDMVYNRCVGTRYCSNNCPYKVRRFNFLLFQDWDTPSLKMLRNPEVSVRSRGVMEKCTYCVQRIEYAKIEAEKEGRRVRDGEIVTACQATCPTEAIVFGDLNDTNSRVARLQAQKRRYDLLADLNTRPRTVYLASVRNPNEAIAGGEEKA

Samples

Sample ID Description Type Environment
1 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
2 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
3 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
4 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
52 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
54 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
55 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
56 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
57 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
58 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
59 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
60 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
61 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
62 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
63 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
64 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
65 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
66 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
67 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
68 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
69 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
70 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
71 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
72 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
73 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
75 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
76 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
77 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
78 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
79 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
80 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
81 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
82 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
83 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
84 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
85 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
86 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
87 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
88 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
89 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
90 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
95 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
96 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
97 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
98 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
99 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
100 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
101 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
102 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
103 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
106 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
107 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
108 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
109 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
110 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
111 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
112 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
113 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.28
Nodule 0
Rhizoplane 3.85
Rhizosphere 91.67
Stem 0
Stem Tuber 0
Unclassified 3.21

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070666_10001930 3300005335 Bacteria 12615
2 Ga0068868_100016346 3300005338 Bacteria 5511
3 Ga0070687_100004071 3300005343 Bacteria 5776
4 Ga0070671_100002245 3300005355 Bacteria 14916
5 Ga0070673_100035736 3300005364 Bacteria 3770
6 Ga0070714_100003941 3300005435 Bacteria 11160
7 Ga0070714_100025664 3300005435 Bacteria 4865
8 Ga0070711_100000079 3300005439 Bacteria 53822
9 Ga0070694_100026606 3300005444 Bacteria 3751
10 Ga0070708_100000957 3300005445 Bacteria 21911
11 Ga0070708_100024270 3300005445 Bacteria 5170
12 Ga0070708_100027777 3300005445 Bacteria 4859
13 Ga0070685_10008275 3300005466 Bacteria 5339
14 Ga0070706_100000479 3300005467 Bacteria 47131
15 Ga0070706_100009097 3300005467 Bacteria 9250
16 Ga0070707_100004004 3300005468 Bacteria 13864
17 Ga0070698_100000012 3300005471 Bacteria 116260
18 Ga0070699_100011694 3300005518 Bacteria 7579
19 Ga0070699_100040355 3300005518 Bacteria 4041
20 Ga0070697_100001672 3300005536 Bacteria 16933
21 Ga0070697_100002228 3300005536 Bacteria 14869
22 Ga0070697_100034412 3300005536 Bacteria 4085
23 Ga0068863_100000654 3300005841 Bacteria 35100
24 Ga0068860_100047579 3300005843 Bacteria 4087
25 Ga0081539_10000514 3300005985 Bacteria 80510
26 Ga0081539_10001217 3300005985 Bacteria 45977
27 Ga0070712_100000044 3300006175 Bacteria 66245
28 Ga0075366_10001682 3300006195 Bacteria 11105
29 Ga0097621_100027262 3300006237 Bacteria 4491
30 Ga0075428_100017644 3300006844 Bacteria 7886
31 Ga0075431_100004864 3300006847 Bacteria 13228
32 Ga0075431_100015965 3300006847 Bacteria 7619
33 Ga0075433_10007752 3300006852 Bacteria 8530
34 Ga0075434_100003759 3300006871 Bacteria 13555
35 Ga0075434_100008868 3300006871 Bacteria 9363
36 Ga0075436_100019017 3300006914 Bacteria 4705
37 Ga0075435_100003302 3300007076 Bacteria 10938
38 Ga0075435_100013823 3300007076 Bacteria 6018
39 Ga0105240_10028085 3300009093 Bacteria 7356
40 Ga0105240_10039030 3300009093 Bacteria 6084
41 Ga0111539_10000070 3300009094 Bacteria 103017
42 Ga0111539_10011030 3300009094 Bacteria 11369
43 Ga0111539_10015487 3300009094 Bacteria 9479
44 Ga0111539_10046203 3300009094 Bacteria 5209
45 Ga0114129_10000418 3300009147 Bacteria 50300
46 Ga0114129_10002092 3300009147 Bacteria 27445
47 Ga0114129_10002491 3300009147 Bacteria 25558
48 Ga0114129_10003254 3300009147 Bacteria 22796
49 Ga0114129_10035016 3300009147 Bacteria 7093
50 Ga0114129_10043231 3300009147 Bacteria 6339
51 Ga0114129_10072734 3300009147 Bacteria 4792
52 Ga0105243_10018426 3300009148 Bacteria 5288
53 Ga0105248_10058425 3300009177 Bacteria 4332
54 Ga0105239_10021400 3300010375 Bacteria 7130
55 Ga0163162_10023787 3300013306 Bacteria 6047
56 Ga0157372_10053677 3300013307 Bacteria 4493
57 Ga0163163_10000036 3300014325 Bacteria 156659
58 Ga0157379_10003760 3300014968 Bacteria 12913
59 Ga0213876_10000083 3300021384 Bacteria 107933
60 Ga0213876_10000280 3300021384 Bacteria 46817
61 Ga0207684_10002954 3300025910 Bacteria 16852
62 Ga0207684_10003678 3300025910 Bacteria 14869
63 Ga0207684_10017574 3300025910 Bacteria 6133
64 Ga0207693_10000230 3300025915 Bacteria 51238
65 Ga0207663_10002554 3300025916 Bacteria 8744
66 Ga0207662_10002294 3300025918 Bacteria 9578
67 Ga0207662_10006212 3300025918 Bacteria 6433
68 Ga0207646_10000287 3300025922 Bacteria 69461
69 Ga0207644_10004997 3300025931 Bacteria 8658
70 Ga0207691_10042281 3300025940 Bacteria 4201
71 Ga0207712_10025103 3300025961 Bacteria 3956
72 Ga0207678_10006704 3300026067 Bacteria 10213
73 Ga0207641_10000531 3300026088 Bacteria 42739
74 Ga0207683_10015288 3300026121 Bacteria 6533
75 Ga0209974_10000488 3300027876 Bacteria 13238
76 Ga0207428_10000093 3300027907 Bacteria 123740
77 Ga0207428_10000568 3300027907 Bacteria 43738
78 Ga0207428_10023443 3300027907 Bacteria 5190
79 Ga0268264_10017916 3300028381 Bacteria 5793
80 Ga0268264_10045734 3300028381 Bacteria 3635
81 Ga0265319_1000257 3300028563 Bacteria 40109
82 Ga0265318_10000410 3300028577 Bacteria 33167
83 Ga0265320_10001165 3300031240 Bacteria 19335
84 Ga0265329_10001114 3300031242 Bacteria 13211
85 Ga0265331_10000662 3300031250 Bacteria 29788
86 Ga0265313_10018049 3300031595 Bacteria 3978
87 Ga0265342_10001726 3300031712 Bacteria 19969
88 Ga0373930_0000860 3300034816 Bacteria 4328
89 Ga0373928_0002855 3300035084 Bacteria 3330
90 Ga0373929_0000205 3300035085 Bacteria 10612
91 Ga0373940_0000120 3300035088 Bacteria 9859
92 Ga0373949_0000817 3300035090 Bacteria 9928
93 Ga0373932_0000673 3300035112 Bacteria 10369
94 Ga0373939_0000418 3300035114 Bacteria 10661
95 Ga0373941_0000830 3300035115 Bacteria 6347
96 Ga0373957_0006236 3300035120 Bacteria 3748
97 Ga0373960_0000057 3300035121 Bacteria 15292
98 Ga0373942_0000027 3300035207 Bacteria 27511
99 Ga0373961_0000998 3300035241 Bacteria 9295
100 Ga0373931_0008765 3300035691 Bacteria 4813
101 Ga0373937_0000120 3300036401 Bacteria 74752
102 Ga0373925_0048220 3300037068 Bacteria 3173
103 Ga0436365_0563106 3300039437 Bacteria 187681
104 Ga0436365_0769295 3300039437 Bacteria 3056
105 Ga0436365_1700788 3300039437 Bacteria 98783
106 Ga0451576_0005274 3300045051 Bacteria 16262
107 Ga0466967_0005017 3300045976 Bacteria 9070
108 Ga0495580_0020124 3300046472 Bacteria 4946
109 Ga0495586_0002253 3300046535 Bacteria 10498
110 Ga0495587_0036240 3300046536 Bacteria 2968
111 Ga0495623_0014213 3300046679 Bacteria 5156
112 Ga0495646_0013858 3300046680 Bacteria 5125
113 Ga0495613_0035326 3300046689 Bacteria 3710
114 Ga0495684_0001113 3300047471 Bacteria 21640
115 Ga0496101_0004037 3300048904 Bacteria 9173
116 Ga0496102_0029726 3300048905 Bacteria 4890
117 Ga0496109_0024926 3300048912 Bacteria 5325
118 Ga0496110_0044721 3300048913 Bacteria 3868
119 Ga0496112_0082620 3300048915 Bacteria 3177
120 Ga0496114_0000455 3300048917 Bacteria 30109
121 Ga0501034_0012290 3300049571 Bacteria 8847
122 Ga0501036_0002352 3300049572 Bacteria 14792
123 Ga0501046_0003964 3300049580 Bacteria 13513
124 Ga0501068_0014003 3300049584 Bacteria 4577
125 Ga0501071_0007813 3300049587 Bacteria 7052
126 Ga0501072_0042941 3300049588 Bacteria 3553
127 Ga0501075_0001420 3300049591 Bacteria 15591
128 Ga0501075_0011141 3300049591 Bacteria 6355
129 Ga0501076_0005987 3300049592 Bacteria 8781
130 Ga0501077_0009094 3300049593 Bacteria 6165
131 Ga0501079_0001904 3300049741 Bacteria 14960
132 Ga0501079_0025700 3300049741 Bacteria 4515
133 Ga0501080_0007613 3300049742 Bacteria 9792
134 Ga0501045_0008132 3300049824 Bacteria 7307
135 nmdc:mga0k408_29277_c1 3300050493 Bacteria 3134
136 nmdc:mga05p37_12030_c1 3300050507 Bacteria 10326
137 nmdc:mga05p37_17049_c1 3300050507 Bacteria 8761
138 nmdc:mga05p37_1_c1 3300050507 Bacteria 177088
139 nmdc:mga05p37_25381_c1 3300050507 Bacteria 7206
140 nmdc:mga05p37_5459_c1 3300050507 Bacteria 14924
141 nmdc:mga05p37_833_c1 3300050507 Bacteria 34555
142 nmdc:mga09592_39919_c1 3300050508 Bacteria 3943
143 nmdc:mga06r32_1930_c1 3300050510 Bacteria 18482
144 nmdc:mga08y16_13142_c1 3300050511 Bacteria 8710
145 nmdc:mga08y16_3928_c1 3300050511 Bacteria 15483
146 nmdc:mga08y16_40852_c1 3300050511 Bacteria 4860
147 nmdc:mga08y16_4445_c1 3300050511 Bacteria 14655
148 nmdc:mga0rr50_885_c1 3300050513 Bacteria 16201
149 nmdc:mga08x19_11594_c1 3300050514 Bacteria 5306
150 nmdc:mga08x19_21124_c1 3300050514 Bacteria 4015
151 nmdc:mga0a205_11815_c1 3300050515 Bacteria 8058
152 nmdc:mga0a205_9383_c1 3300050515 Bacteria 8943
153 Ga0590071_000586 3300059421 Bacteria 10490
154 Ga0590075_000106 3300059424 Bacteria 21524
155 Ga0501082_0000325 3300060353 Bacteria 42343
156 Ga0501082_0013084 3300060353 Bacteria 7133

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035112 Ga0373932_0000673 Ga0373932_0000673_10_2487 768
2 3300046536 Ga0495587_0036240 Ga0495587_0036240_199_2844 814
3 3300037068 Ga0373925_0048220 Ga0373925_0048220_46_2745 829
4 3300049592 Ga0501076_0005987 Ga0501076_0005987_39_2732 858
5 3300039437 Ga0436365_0769295 Ga0436365_0769295_128_3037 876
6 3300049571 Ga0501034_0012290 Ga0501034_0012290_724_3663 886
7 3300048912 Ga0496109_0024926 Ga0496109_0024926_14_2854 893
8 3300027907 Ga0207428_10000568 Ga0207428_1000056827 906
9 3300050511 nmdc:mga08y16_3928_c1 nmdc:mga08y16_3928_c1_7447_10521 906
10 3300027876 Ga0209974_10000488 Ga0209974_100004889 910
11 3300014325 Ga0163163_10000036 Ga0163163_100000363 913
12 3300025940 Ga0207691_10042281 Ga0207691_100422812 913
13 3300048913 Ga0496110_0044721 Ga0496110_0044721_173_3226 913
14 3300010375 Ga0105239_10021400 Ga0105239_100214004 914
15 3300049588 Ga0501072_0042941 Ga0501072_0042941_247_3444 914
16 3300034816 Ga0373930_0000860 Ga0373930_0000860_690_3611 915
17 3300035084 Ga0373928_0002855 Ga0373928_0002855_309_3230 915
18 3300035085 Ga0373929_0000205 Ga0373929_0000205_178_3099 915
19 3300035088 Ga0373940_0000120 Ga0373940_0000120_6291_9212 915
20 3300035090 Ga0373949_0000817 Ga0373949_0000817_2825_5746 915
21 3300035114 Ga0373939_0000418 Ga0373939_0000418_7139_10060 915
22 3300035115 Ga0373941_0000830 Ga0373941_0000830_2963_5884 915
23 3300035121 Ga0373960_0000057 Ga0373960_0000057_8769_11690 915
24 3300035207 Ga0373942_0000027 Ga0373942_0000027_8572_11493 915
25 3300035241 Ga0373961_0000998 Ga0373961_0000998_5113_8034 915
26 3300035691 Ga0373931_0008765 Ga0373931_0008765_544_3465 915
27 3300045051 Ga0451576_0005274 Ga0451576_0005274_6762_9683 915
28 3300005445 Ga0070708_100024270 Ga0070708_1000242702 916
29 3300005467 Ga0070706_100000479 Ga0070706_10000047922 916
30 3300005536 Ga0070697_100001672 Ga0070697_1000016729 916
31 3300025910 Ga0207684_10003678 Ga0207684_100036785 916
32 3300049741 Ga0501079_0025700 Ga0501079_0025700_1171_4350 916
33 3300050515 nmdc:mga0a205_11815_c1 nmdc:mga0a205_11815_c1_3522_6563 921
34 3300059421 Ga0590071_000586 Ga0590071_000586_3356_6442 922
35 3300059424 Ga0590075_000106 Ga0590075_000106_7446_10553 922
36 3300006195 Ga0075366_10001682 Ga0075366_100016821 923
37 3300006852 Ga0075433_10007752 Ga0075433_100077524 923
38 3300009094 Ga0111539_10000070 Ga0111539_1000007083 923
39 3300009147 Ga0114129_10003254 Ga0114129_100032549 923
40 3300009147 Ga0114129_10043231 Ga0114129_100432312 923
41 3300025961 Ga0207712_10025103 Ga0207712_100251032 923
42 3300026067 Ga0207678_10006704 Ga0207678_100067046 923
43 3300027907 Ga0207428_10000093 Ga0207428_1000009314 923
44 3300035120 Ga0373957_0006236 Ga0373957_0006236_408_3443 923
45 3300036401 Ga0373937_0000120 Ga0373937_0000120_7460_10495 923
46 3300050493 nmdc:mga0k408_29277_c1 nmdc:mga0k408_29277_c1_50_3082 923
47 3300050507 nmdc:mga05p37_1_c1 nmdc:mga05p37_1_c1_25038_28088 923
48 3300050508 nmdc:mga09592_39919_c1 nmdc:mga09592_39919_c1_604_3636 923
49 3300050511 nmdc:mga08y16_4445_c1 nmdc:mga08y16_4445_c1_11295_14327 923
50 3300005338 Ga0068868_100016346 Ga0068868_1000163462 925
51 3300005466 Ga0070685_10008275 Ga0070685_100082752 925
52 3300009148 Ga0105243_10018426 Ga0105243_100184262 925
53 3300025910 Ga0207684_10017574 Ga0207684_100175743 925
54 3300025918 Ga0207662_10002294 Ga0207662_100022942 925
55 3300026121 Ga0207683_10015288 Ga0207683_100152884 925
56 3300050513 nmdc:mga0rr50_885_c1 nmdc:mga0rr50_885_c1_6999_10085 925
57 3300021384 Ga0213876_10000083 Ga0213876_1000008328 927
58 3300039437 Ga0436365_0563106 Ga0436365_0563106_104100_107609 927
59 3300006847 Ga0075431_100004864 Ga0075431_10000486410 928
60 3300009093 Ga0105240_10028085 Ga0105240_100280853 928
61 3300050507 nmdc:mga05p37_25381_c1 nmdc:mga05p37_25381_c1_465_3527 928
62 3300050510 nmdc:mga06r32_1930_c1 nmdc:mga06r32_1930_c1_11446_14508 928
63 3300047471 Ga0495684_0001113 Ga0495684_0001113_13222_16221 929
64 3300005445 Ga0070708_100000957 Ga0070708_10000095715 930
65 3300005467 Ga0070706_100009097 Ga0070706_1000090974 930
66 3300005468 Ga0070707_100004004 Ga0070707_1000040043 930
67 3300005471 Ga0070698_100000012 Ga0070698_10000001266 930
68 3300005518 Ga0070699_100040355 Ga0070699_1000403552 930
69 3300005536 Ga0070697_100002228 Ga0070697_10000222814 930
70 3300009094 Ga0111539_10015487 Ga0111539_100154871 930
71 3300025910 Ga0207684_10002954 Ga0207684_100029545 930
72 3300025922 Ga0207646_10000287 Ga0207646_1000028727 930
73 3300028563 Ga0265319_1000257 Ga0265319_10002579 931
74 3300028577 Ga0265318_10000410 Ga0265318_1000041016 931
75 3300031240 Ga0265320_10001165 Ga0265320_100011652 931
76 3300031242 Ga0265329_10001114 Ga0265329_100011147 931
77 3300031250 Ga0265331_10000662 Ga0265331_1000066219 931
78 3300031595 Ga0265313_10018049 Ga0265313_100180492 931
79 3300031712 Ga0265342_10001726 Ga0265342_1000172611 931
80 3300049591 Ga0501075_0011141 Ga0501075_0011141_1621_4803 931
81 3300049593 Ga0501077_0009094 Ga0501077_0009094_2027_5209 931
82 3300060353 Ga0501082_0000325 Ga0501082_0000325_36885_40049 931
83 3300009093 Ga0105240_10039030 Ga0105240_100390305 932
84 3300046689 Ga0495613_0035326 Ga0495613_0035326_16_3189 932
85 3300005435 Ga0070714_100003941 Ga0070714_1000039414 933
86 3300005355 Ga0070671_100002245 Ga0070671_1000022455 934
87 3300013306 Ga0163162_10023787 Ga0163162_100237872 934
88 3300021384 Ga0213876_10000280 Ga0213876_1000028031 934
89 3300025931 Ga0207644_10004997 Ga0207644_100049977 934
90 3300039437 Ga0436365_1700788 Ga0436365_1700788_25278_28793 934
91 3300005435 Ga0070714_100025664 Ga0070714_1000256642 935
92 3300009094 Ga0111539_10011030 Ga0111539_100110303 935
93 3300013307 Ga0157372_10053677 Ga0157372_100536772 935
94 3300005439 Ga0070711_100000079 Ga0070711_10000007944 936
95 3300006175 Ga0070712_100000044 Ga0070712_1000000445 936
96 3300006844 Ga0075428_100017644 Ga0075428_1000176443 936
97 3300009147 Ga0114129_10002491 Ga0114129_1000249110 936
98 3300025915 Ga0207693_10000230 Ga0207693_1000023012 936
99 3300025916 Ga0207663_10002554 Ga0207663_100025543 936
100 3300045976 Ga0466967_0005017 Ga0466967_0005017_3838_6948 936
101 3300050507 nmdc:mga05p37_17049_c1 nmdc:mga05p37_17049_c1_3970_6954 936
102 3300046472 Ga0495580_0020124 Ga0495580_0020124_1147_4227 937
103 3300005364 Ga0070673_100035736 Ga0070673_1000357362 938
104 3300009147 Ga0114129_10035016 Ga0114129_100350162 938
105 3300005985 Ga0081539_10001217 Ga0081539_1000121729 939
106 3300006847 Ga0075431_100015965 Ga0075431_1000159652 939
107 3300009177 Ga0105248_10058425 Ga0105248_100584252 939
108 3300046535 Ga0495586_0002253 Ga0495586_0002253_2621_5653 939
109 3300046679 Ga0495623_0014213 Ga0495623_0014213_272_3304 939
110 3300046680 Ga0495646_0013858 Ga0495646_0013858_792_3824 939
111 3300006871 Ga0075434_100003759 Ga0075434_10000375913 940
112 3300007076 Ga0075435_100003302 Ga0075435_1000033025 940
113 3300005445 Ga0070708_100027777 Ga0070708_1000277772 942
114 3300005536 Ga0070697_100034412 Ga0070697_1000344122 942
115 3300050514 nmdc:mga08x19_11594_c1 nmdc:mga08x19_11594_c1_652_3624 943
116 3300005518 Ga0070699_100011694 Ga0070699_1000116944 944
117 3300005985 Ga0081539_10000514 Ga0081539_1000051425 946
118 3300006237 Ga0097621_100027262 Ga0097621_1000272623 946
119 3300048904 Ga0496101_0004037 Ga0496101_0004037_2543_5527 946
120 3300048905 Ga0496102_0029726 Ga0496102_0029726_1272_4256 946
121 3300048917 Ga0496114_0000455 Ga0496114_0000455_823_3807 946
122 3300048915 Ga0496112_0082620 Ga0496112_0082620_122_3145 947
123 3300005841 Ga0068863_100000654 Ga0068863_10000065424 948
124 3300026088 Ga0207641_10000531 Ga0207641_1000053113 948
125 3300009094 Ga0111539_10046203 Ga0111539_100462032 950
126 3300009147 Ga0114129_10000418 Ga0114129_1000041816 950
127 3300027907 Ga0207428_10023443 Ga0207428_100234433 950
128 3300050507 nmdc:mga05p37_833_c1 nmdc:mga05p37_833_c1_29510_32560 950
129 3300050511 nmdc:mga08y16_13142_c1 nmdc:mga08y16_13142_c1_5300_8389 950
130 3300009147 Ga0114129_10002092 Ga0114129_1000209214 952
131 3300050507 nmdc:mga05p37_12030_c1 nmdc:mga05p37_12030_c1_3271_6306 952
132 3300050511 nmdc:mga08y16_40852_c1 nmdc:mga08y16_40852_c1_608_3736 952
133 3300050515 nmdc:mga0a205_9383_c1 nmdc:mga0a205_9383_c1_4971_8006 952
134 3300005444 Ga0070694_100026606 Ga0070694_1000266062 953
135 3300006914 Ga0075436_100019017 Ga0075436_1000190173 953
136 3300009147 Ga0114129_10072734 Ga0114129_100727343 953
137 3300050507 nmdc:mga05p37_5459_c1 nmdc:mga05p37_5459_c1_4055_7135 953
138 3300049572 Ga0501036_0002352 Ga0501036_0002352_10364_13429 954
139 3300049580 Ga0501046_0003964 Ga0501046_0003964_9629_12694 954
140 3300049584 Ga0501068_0014003 Ga0501068_0014003_715_3780 954
141 3300049587 Ga0501071_0007813 Ga0501071_0007813_484_3549 954
142 3300049591 Ga0501075_0001420 Ga0501075_0001420_12092_15157 954
143 3300049741 Ga0501079_0001904 Ga0501079_0001904_1518_4583 954
144 3300049742 Ga0501080_0007613 Ga0501080_0007613_1306_4371 954
145 3300049824 Ga0501045_0008132 Ga0501045_0008132_563_3628 954
146 3300060353 Ga0501082_0013084 Ga0501082_0013084_1511_4576 954
147 3300050514 nmdc:mga08x19_21124_c1 nmdc:mga08x19_21124_c1_810_3905 955
148 3300006871 Ga0075434_100008868 Ga0075434_1000088685 956
149 3300007076 Ga0075435_100013823 Ga0075435_1000138232 956
150 3300005343 Ga0070687_100004071 Ga0070687_1000040711 958
151 3300014968 Ga0157379_10003760 Ga0157379_100037603 958
152 3300025918 Ga0207662_10006212 Ga0207662_100062123 958
153 3300005843 Ga0068860_100047579 Ga0068860_1000475792 960
154 3300028381 Ga0268264_10017916 Ga0268264_100179163 960
155 3300028381 Ga0268264_10045734 Ga0268264_100457342 960
156 3300005335 Ga0070666_10001930 Ga0070666_1000193010 963

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13247

Fer4_11

4Fe-4S dicluster domain

889

952

0.92

PF12838

Fer4_7

4Fe-4S dicluster domain

841

914

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
6lod-assembly1.cif.gz_B cryo-em structure of the air-oxidized photosynthetic alternative complex iii from roseiflexus castenholzii 0.8876 72 963
6f0k-assembly1.cif.gz_B alternative complex iii 0.8545 72 961
6lod-assembly1.cif.gz_B cryo-em structure of the air-oxidized photosynthetic alternative complex iii from roseiflexus castenholzii 0.8526 72 963
6btm-assembly1.cif.gz_B structure of alternative complex iii from flavobacterium johnsoniae (wild type) 0.8493 74 956
6f0k-assembly1.cif.gz_B alternative complex iii 0.7939 72 961
ID Description Score Start End Superfamily
af_P33602_508_691_3.40.50.740 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8587 368 458 3.40.50.740
2vpwF01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8562 728 953 3.30.70.20
2vpzE01 Mainly Beta;Single Sheet;N-terminal domain of TfIIb;ADC-like domains 0.8445 92 151 2.20.25.90
af_P33602_811_906_2.40.40.20 Mainly Beta;Beta Barrel;Barwin-like endoglucanases; 0.8237 571 633 2.40.40.20
2vpwF01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.804 728 953 3.30.70.20
ID Description Score Start End GO Terms
AF-A0A2M8NH63-F1-model_v4 Molybdopterin oxidoreductase 0.9533 184 459
AF-A0A136KYJ0-F1-model_v4 Quinol:cytochrome c oxidoreductase iron-sulfur protein (EC 1.2.7.-) 0.9099 323 452 GO:0016491
AF-A0A2V8LE87-F1-model_v4 Molybdopterin oxidoreductase 0.904 178 961 GO:0051539
AF-A0A2J6WTF6-F1-model_v4 Molybdopterin oxidoreductase 0.8992 378 816 GO:0051539
AF-A0A7X3ZGP2-F1-model_v4 4Fe-4S dicluster domain-containing protein 0.8961 323 961 GO:0051539

Feature Viewer

pLDDT pTM Quality
78.44 0.82 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map