F224317

General Info

Members Datasets Scaffolds Average Seq Length
156 113 312 331

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100109272|Ga0070699_1001092723
Length 332
Sequence VLSRRGFLQHTSGALLTLTSGAVAQRANTNAQVFYDPTVLRHEPPSDHPESPKRLDAAMGAVRILERQGRVSIAPPRPATEDDVLLVHTTEYVKKVRTEIAAGRRTLSTGDTDLSPGSLAAALAAAGTVVSAVDAVMNGRTRTAFCAVRPPGHHASQARGMGFCVFNNIAIGARHARRRHRVDRILIADWDVHHGNGTQEVFWSDGAVLFFDVHQHPWYPGTGSPNELIVNNPFPAGSGRKEILGAFRERLVPLADRFKPQLVMISAGFDSRAGDPLGRFTLTDQDFAELTDVVLGVAREHAGGKLVSVLEGGYALDGLPRAVASHLERLAS

Samples

Sample ID Description Type Environment
1 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
41 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
42 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
48 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
49 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
73 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
77 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
78 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
79 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
80 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
81 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
82 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
83 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
84 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
85 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
86 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
87 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
88 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
89 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
90 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
92 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
95 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
96 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
97 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
98 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
99 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
100 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
106 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
107 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
108 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
109 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
110 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
111 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
112 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
113 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 87.82
Stem 0
Stem Tuber 0
Unclassified 4.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070699_100109272 3300005518 Bacteria 2427
2 Ga0070658_10087440 3300005327 Bacteria 2565
3 Ga0070670_100039735 3300005331 Unclassified 4045
4 Ga0068868_100011555 3300005338 Bacteria 6431
5 Ga0070660_100094230 3300005339 Bacteria 2365
6 Ga0070668_100089882 3300005347 Bacteria 2419
7 Ga0070701_10220069 3300005438 Bacteria 1132
8 Ga0070694_100002412 3300005444 Bacteria 11038
9 Ga0070662_100042631 3300005457 Bacteria 3242
10 Ga0070681_10047783 3300005458 Bacteria 4278
11 Ga0070681_10189153 3300005458 Unclassified 1978
12 Ga0068867_100008299 3300005459 Bacteria 7331
13 Ga0070706_100151704 3300005467 Bacteria 2163
14 Ga0070707_100009814 3300005468 Bacteria 8905
15 Ga0070679_100289354 3300005530 Bacteria 1590
16 Ga0068853_100164329 3300005539 Bacteria 2005
17 Ga0070686_100034422 3300005544 Bacteria 3122
18 Ga0070695_100003276 3300005545 Bacteria 9456
19 Ga0070665_100178688 3300005548 Bacteria 2123
20 Ga0070704_100013966 3300005549 Bacteria 5004
21 Ga0070704_100053157 3300005549 Bacteria 2862
22 Ga0068855_100079278 3300005563 Bacteria 3809
23 Ga0068857_100175485 3300005577 Bacteria 1949
24 Ga0068852_100014987 3300005616 Bacteria 5991
25 Ga0068864_100013427 3300005618 Bacteria 6790
26 Ga0068866_10131355 3300005718 Bacteria 1425
27 Ga0068858_100070893 3300005842 Bacteria 3231
28 Ga0068858_100190666 3300005842 Bacteria 1937
29 Ga0068858_100252131 3300005842 Bacteria 1677
30 Ga0068862_100076221 3300005844 Bacteria 2902
31 Ga0081455_10029142 3300005937 Bacteria 5035
32 Ga0097621_100046807 3300006237 Bacteria 3502
33 Ga0097621_100059548 3300006237 Bacteria 3127
34 Ga0075431_100035132 3300006847 Bacteria 5162
35 Ga0075433_10145552 3300006852 Bacteria 2106
36 Ga0075434_100001165 3300006871 Bacteria 21770
37 Ga0075434_100065943 3300006871 Bacteria 3606
38 Ga0075436_100001753 3300006914 Bacteria 14847
39 Ga0075435_100000004 3300007076 Bacteria 122128
40 Ga0105240_10000021 3300009093 Bacteria 394304
41 Ga0111539_10002671 3300009094 Bacteria 23614
42 Ga0111539_10234214 3300009094 Bacteria 2138
43 Ga0114129_10005611 3300009147 Bacteria 17751
44 Ga0114129_10016768 3300009147 Bacteria 10428
45 Ga0114129_10017206 3300009147 Bacteria 10297
46 Ga0114129_10050133 3300009147 Bacteria 5865
47 Ga0114129_10129627 3300009147 Bacteria 3466
48 Ga0105243_10018540 3300009148 Bacteria 5274
49 Ga0105241_10144020 3300009174 Bacteria 1943
50 Ga0105248_10014076 3300009177 Bacteria 8803
51 Ga0105248_10202204 3300009177 Bacteria 2238
52 Ga0105237_10190203 3300009545 Bacteria 2053
53 Ga0105249_10100275 3300009553 Bacteria 2723
54 Ga0105239_10061623 3300010375 Bacteria 4117
55 Ga0105239_10112920 3300010375 Bacteria 3013
56 Ga0157370_10187044 3300013104 Bacteria 1922
57 Ga0157369_10022119 3300013105 Bacteria 7103
58 Ga0157372_10118993 3300013307 Bacteria 3032
59 Ga0157380_10072574 3300014326 Bacteria 2788
60 Ga0213876_10108187 3300021384 Bacteria 1475
61 Ga0213876_10132277 3300021384 Bacteria 1326
62 Ga0213876_10157700 3300021384 Bacteria 1207
63 Ga0213875_10001250 3300021388 Bacteria 17154
64 Ga0213875_10006694 3300021388 Bacteria 6020
65 Ga0213875_10054422 3300021388 Bacteria 1874
66 Ga0207699_10092194 3300025906 Bacteria 1904
67 Ga0207645_10096131 3300025907 Bacteria 1908
68 Ga0207705_10020496 3300025909 Bacteria 4723
69 Ga0207684_10444454 3300025910 Bacteria 1113
70 Ga0207707_10026608 3300025912 Bacteria 5056
71 Ga0207707_10137915 3300025912 Bacteria 2133
72 Ga0207695_10000083 3300025913 Bacteria 284102
73 Ga0207695_10031066 3300025913 Bacteria 5869
74 Ga0207662_10009890 3300025918 Bacteria 5262
75 Ga0207657_10008775 3300025919 Bacteria 10232
76 Ga0207646_10011616 3300025922 Bacteria 8515
77 Ga0207694_10028929 3300025924 Bacteria 4225
78 Ga0207694_10256688 3300025924 Bacteria 1431
79 Ga0207686_10229438 3300025934 Bacteria 1345
80 Ga0207669_10052683 3300025937 Bacteria 2446
81 Ga0207704_10332670 3300025938 Bacteria 1176
82 Ga0207667_10027674 3300025949 Bacteria 6167
83 Ga0207712_10021926 3300025961 Bacteria 4199
84 Ga0207703_10022522 3300026035 Bacteria 4942
85 Ga0207639_10124335 3300026041 Bacteria 2125
86 Ga0207639_10208735 3300026041 Bacteria 1680
87 Ga0207708_10335397 3300026075 Bacteria 1237
88 Ga0207648_10016626 3300026089 Bacteria 6716
89 Ga0207676_10032874 3300026095 Bacteria 3914
90 Ga0207674_10120052 3300026116 Unclassified 2597
91 Ga0207674_10257316 3300026116 Bacteria 1693
92 Ga0207675_100166945 3300026118 Bacteria 2102
93 Ga0207698_10013978 3300026142 Bacteria 5318
94 Ga0207698_10117354 3300026142 Bacteria 2245
95 Ga0207428_10098990 3300027907 Bacteria 2255
96 Ga0268266_10018858 3300028379 Bacteria 5879
97 Ga0268265_10053097 3300028380 Bacteria 3069
98 Ga0268264_10173951 3300028381 Bacteria 1950
99 Ga0373928_0001773 3300035084 Bacteria 4192
100 Ga0373929_0000362 3300035085 Bacteria 8478
101 Ga0373949_0000466 3300035090 Bacteria 13893
102 Ga0373951_0000525 3300035091 Bacteria 10791
103 Ga0373952_0000577 3300035092 Bacteria 6467
104 Ga0373939_0001137 3300035114 Bacteria 6557
105 Ga0373941_0000312 3300035115 Bacteria 9425
106 Ga0373960_0000336 3300035121 Bacteria 8991
107 Ga0373942_0006751 3300035207 Bacteria 2651
108 Ga0373961_0000566 3300035241 Bacteria 13958
109 Ga0373962_0000489 3300035242 Bacteria 8790
110 Ga0373931_0000500 3300035691 Bacteria 15976
111 Ga0373927_0189273 3300035695 Unclassified 1350
112 Ga0373947_0005090 3300035725 Bacteria 7702
113 Ga0373937_0080075 3300036401 Bacteria 3020
114 Ga0395900_0214229 3300037418 Bacteria 1944
115 Ga0436364_0007038 3300037853 Bacteria 6414
116 Ga0436364_0087536 3300037853 Bacteria 4862
117 Ga0436364_0263001 3300037853 Bacteria 2703
118 Ga0436364_0275010 3300037853 Bacteria 4564
119 Ga0436364_0589860 3300037853 Bacteria 38748
120 Ga0436364_0865140 3300037853 Bacteria 14776
121 Ga0436364_1103378 3300037853 Bacteria 14149
122 Ga0436364_1358885 3300037853 Bacteria 8557
123 Ga0436364_1389561 3300037853 Bacteria 5011
124 Ga0436365_0511441 3300039437 Bacteria 4143
125 Ga0436365_0856530 3300039437 Bacteria 3578
126 Ga0436365_1198256 3300039437 Bacteria 11815
127 Ga0436365_1769788 3300039437 Bacteria 2304
128 Ga0436361_0167783 3300039447 Bacteria 6752
129 Ga0466963_0262047 3300044694 Unclassified 1214
130 Ga0451576_0002824 3300045051 Bacteria 24981
131 Ga0466967_0219120 3300045976 Unclassified 1808
132 Ga0495580_0096063 3300046472 Bacteria 2061
133 Ga0495658_0139224 3300046683 Unclassified 1483
134 Ga0501032_0002319 3300049569 Bacteria 14924
135 Ga0501033_0000074 3300049570 Bacteria 94345
136 Ga0501034_0105371 3300049571 Bacteria 2812
137 Ga0501073_0109428 3300049589 Bacteria 1917
138 Ga0501080_0082441 3300049742 Bacteria 2987
139 Ga0501080_0209981 3300049742 Bacteria 1784
140 Ga0501044_0010298 3300049823 Bacteria 10156
141 nmdc:mga05p37_2367_c1 3300050507 Bacteria 21945
142 nmdc:mga05p37_297150_c1 3300050507 Bacteria 1920
143 nmdc:mga05p37_46815_c1 3300050507 Bacteria 5318
144 nmdc:mga05p37_58803_c1 3300050507 Bacteria 4734
145 nmdc:mga05p37_8751_c1 3300050507 Bacteria 11958
146 nmdc:mga05p37_8800_c1 3300050507 Bacteria 11929
147 nmdc:mga09592_138832_c1 3300050508 Bacteria 2094
148 nmdc:mga06r32_31646_c1 3300050510 Bacteria 4970
149 nmdc:mga06r32_69746_c1 3300050510 Bacteria 3398
150 nmdc:mga08y16_92692_c1 3300050511 Bacteria 3148
151 nmdc:mga0n895_248708_c1 3300050512 Bacteria 1804
152 nmdc:mga0n895_319_c1 3300050512 Bacteria 32031
153 nmdc:mga0n895_32305_c1 3300050512 Bacteria 5023
154 nmdc:mga0rr50_7_c1 3300050513 Bacteria 297175
155 nmdc:mga08x19_355_c1 3300050514 Bacteria 32978
156 nmdc:mga0a205_26827_c1 3300050515 Bacteria 3452
157 Ga0070699_100109272
158 Ga0070658_10087440
159 Ga0070670_100039735
160 Ga0068868_100011555
161 Ga0070660_100094230
162 Ga0070668_100089882
163 Ga0070701_10220069
164 Ga0070694_100002412
165 Ga0070662_100042631
166 Ga0070681_10047783
167 Ga0070681_10189153
168 Ga0068867_100008299
169 Ga0070706_100151704
170 Ga0070707_100009814
171 Ga0070679_100289354
172 Ga0068853_100164329
173 Ga0070686_100034422
174 Ga0070695_100003276
175 Ga0070665_100178688
176 Ga0070704_100013966
177 Ga0070704_100053157
178 Ga0068855_100079278
179 Ga0068857_100175485
180 Ga0068852_100014987
181 Ga0068864_100013427
182 Ga0068866_10131355
183 Ga0068858_100070893
184 Ga0068858_100190666
185 Ga0068858_100252131
186 Ga0068862_100076221
187 Ga0081455_10029142
188 Ga0097621_100046807
189 Ga0097621_100059548
190 Ga0075431_100035132
191 Ga0075433_10145552
192 Ga0075434_100001165
193 Ga0075434_100065943
194 Ga0075436_100001753
195 Ga0075435_100000004
196 Ga0105240_10000021
197 Ga0111539_10002671
198 Ga0111539_10234214
199 Ga0114129_10005611
200 Ga0114129_10016768
201 Ga0114129_10017206
202 Ga0114129_10050133
203 Ga0114129_10129627
204 Ga0105243_10018540
205 Ga0105241_10144020
206 Ga0105248_10014076
207 Ga0105248_10202204
208 Ga0105237_10190203
209 Ga0105249_10100275
210 Ga0105239_10061623
211 Ga0105239_10112920
212 Ga0157370_10187044
213 Ga0157369_10022119
214 Ga0157372_10118993
215 Ga0157380_10072574
216 Ga0213876_10108187
217 Ga0213876_10132277
218 Ga0213876_10157700
219 Ga0213875_10001250
220 Ga0213875_10006694
221 Ga0213875_10054422
222 Ga0207699_10092194
223 Ga0207645_10096131
224 Ga0207705_10020496
225 Ga0207684_10444454
226 Ga0207707_10026608
227 Ga0207707_10137915
228 Ga0207695_10000083
229 Ga0207695_10031066
230 Ga0207662_10009890
231 Ga0207657_10008775
232 Ga0207646_10011616
233 Ga0207694_10028929
234 Ga0207694_10256688
235 Ga0207686_10229438
236 Ga0207669_10052683
237 Ga0207704_10332670
238 Ga0207667_10027674
239 Ga0207712_10021926
240 Ga0207703_10022522
241 Ga0207639_10124335
242 Ga0207639_10208735
243 Ga0207708_10335397
244 Ga0207648_10016626
245 Ga0207676_10032874
246 Ga0207674_10120052
247 Ga0207674_10257316
248 Ga0207675_100166945
249 Ga0207698_10013978
250 Ga0207698_10117354
251 Ga0207428_10098990
252 Ga0268266_10018858
253 Ga0268265_10053097
254 Ga0268264_10173951
255 Ga0373928_0001773
256 Ga0373929_0000362
257 Ga0373949_0000466
258 Ga0373951_0000525
259 Ga0373952_0000577
260 Ga0373939_0001137
261 Ga0373941_0000312
262 Ga0373960_0000336
263 Ga0373942_0006751
264 Ga0373961_0000566
265 Ga0373962_0000489
266 Ga0373931_0000500
267 Ga0373927_0189273
268 Ga0373947_0005090
269 Ga0373937_0080075
270 Ga0395900_0214229
271 Ga0436364_0007038
272 Ga0436364_0087536
273 Ga0436364_0263001
274 Ga0436364_0275010
275 Ga0436364_0589860
276 Ga0436364_0865140
277 Ga0436364_1103378
278 Ga0436364_1358885
279 Ga0436364_1389561
280 Ga0436365_0511441
281 Ga0436365_0856530
282 Ga0436365_1198256
283 Ga0436365_1769788
284 Ga0436361_0167783
285 Ga0466963_0262047
286 Ga0451576_0002824
287 Ga0466967_0219120
288 Ga0495580_0096063
289 Ga0495658_0139224
290 Ga0501032_0002319
291 Ga0501033_0000074
292 Ga0501034_0105371
293 Ga0501073_0109428
294 Ga0501080_0082441
295 Ga0501080_0209981
296 Ga0501044_0010298
297 nmdc:mga05p37_2367_c1
298 nmdc:mga05p37_297150_c1
299 nmdc:mga05p37_46815_c1
300 nmdc:mga05p37_58803_c1
301 nmdc:mga05p37_8751_c1
302 nmdc:mga05p37_8800_c1
303 nmdc:mga09592_138832_c1
304 nmdc:mga06r32_31646_c1
305 nmdc:mga06r32_69746_c1
306 nmdc:mga08y16_92692_c1
307 nmdc:mga0n895_248708_c1
308 nmdc:mga0n895_319_c1
309 nmdc:mga0n895_32305_c1
310 nmdc:mga0rr50_7_c1
311 nmdc:mga08x19_355_c1
312 nmdc:mga0a205_26827_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00850

Hist_deacetyl

Histone deacetylase domain

48

330

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8szt-assembly1.cif.gz_C-2 structure of kdac1 from acinetobacter baumannii 0.9731 33 343
8szt-assembly1.cif.gz_D-2 structure of kdac1 from acinetobacter baumannii 0.9724 35 343
5g11-assembly1.cif.gz_B pseudomonas aeruginosa hdah bound to pfsaha. 0.9723 33 343
5g0y-assembly1.cif.gz_B pseudomonas aeruginosa hdah unliganded. 0.9719 33 343
8szu-assembly1.cif.gz_A-2 structure of kdac1-citarinostat complex from acinetobacter baumannii 0.9687 32 343
ID Description Score Start End Superfamily
af_A0A1D6N7T5_1_214_3.40.800.20 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.983 164 341 3.40.800.20
5li3A00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.9642 33 345 3.40.800.20
5g1cA00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.963 32 345 3.40.800.20
af_Q941D6_56_421_3.40.800.20 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.9488 29 343 3.40.800.20
af_D3ZVD8_79_465_3.40.800.20 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.9463 30 341 3.40.800.20
ID Description Score Start End GO Terms
AF-A0A2A4LI98-F1-model_v4 Histone deacetylase domain-containing protein 0.9978 264 341 GO:0004407
GO:0040029
AF-A0A258AUQ6-F1-model_v4 Histone deacetylase 0.9955 33 342 GO:0004407
GO:0040029
AF-A0A383B5R0-F1-model_v4 Histone deacetylase domain-containing protein 0.9946 241 341 GO:0004407
GO:0040029
AF-A0A7T1HND3-F1-model_v4 Histone deacetylase 0.9904 33 343 GO:0004407
GO:0040029
AF-A0A3D2K2E8-F1-model_v4 histone deacetylase (EC 3.5.1.98) 0.9892 177 341 GO:0004407
GO:0040029

Map