F223820

General Info

Members Datasets Scaffolds Average Seq Length
156 101 312 479

Family's Representative Sequence

Representative Sequence 3300005289|Ga0065704_10127029|Ga0065704_101270291
Length 505
Sequence VNRSLKPPLISTLIILFLAFVFPLIAQENGGQVQVPFSSAPYRVGERLTYNVAFSSFPDAAHVEVEVVSRGLHFGREAVQLRAHVETNGVINVALFAINNDYTTYVDPATGLPFRVEETARDAIKAADSAQDFNQPAGNEAIPPKQRGFPGTYDLLSAFYRARALPLNDGAVYDLSVRGQGVEYQAELKVAGRAVIRTNVGSFPTIVTQVKVTNAPVKNLKIYFSDDERHVPVLLTARVSSGDLTAELAGSELIKPPEEVPKPTPPIVAAPIPKPEAPPALSANLPFKIGEQLNYQVFIGTNNTPLGLATFQVRGRQRYFDRDGVFLNVTAQTTGAATALFVARDQIDSYVDPNALLPFRTVLNLVEGRRRLNQTLTYDQNVGAAVVDNSMKLDVPAGTHDYVSFFYALRTFNFAAKKRQALSMLVENKPKTLFVEAQKREAIRLGDRTVQALALSITSDDPQPDKYQLRMWISDDYQRLPLRITCMTKLGPLRADLAIVPTTPQ

Samples

Sample ID Description Type Environment
1 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
7 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
38 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
39 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
45 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
78 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
81 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
82 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
85 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
86 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
87 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
88 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
89 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
90 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
91 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
94 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
95 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
96 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
97 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
98 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
99 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
100 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
101 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.85
Rhizosphere 96.15
Stem 0
Stem Tuber 0
Unclassified 12.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065704_10127029 3300005289 Bacteria 1680
2 MRS1b_contig_7972914 2162886011 Bacteria 2417
3 JGI24751J29686_10000027 3300002459 Bacteria 95343
4 JGI24751J29686_10000117 3300002459 Bacteria 42034
5 JGI25406J46586_10012670 3300003203 Bacteria 3646
6 Ga0065714_10064464 3300005288 Bacteria 65432
7 Ga0065712_10000137 3300005290 Bacteria 65446
8 Ga0065712_10069968 3300005290 Bacteria 6457
9 Ga0065715_10003552 3300005293 Bacteria 5003
10 Ga0065715_10089964 3300005293 Bacteria 7975
11 Ga0065715_10099097 3300005293 Bacteria 3458
12 Ga0065715_10112054 3300005293 Bacteria 2546
13 Ga0070670_100000070 3300005331 Bacteria 103166
14 Ga0068869_100064866 3300005334 Bacteria 2687
15 Ga0070682_100003235 3300005337 Bacteria 9035
16 Ga0070682_100003539 3300005337 Bacteria 8643
17 Ga0070692_10017416 3300005345 Bacteria 3436
18 Ga0070692_10046782 3300005345 Bacteria 2237
19 Ga0070669_100119937 3300005353 Bacteria 2005
20 Ga0070673_100012582 3300005364 Bacteria 5813
21 Ga0070659_100079906 3300005366 Bacteria 2610
22 Ga0070703_10005114 3300005406 Bacteria 3666
23 Ga0070705_100027306 3300005440 Bacteria 3116
24 Ga0070700_100000022 3300005441 Bacteria 130126
25 Ga0070694_100026377 3300005444 Bacteria 3765
26 Ga0070694_100037468 3300005444 Bacteria 3216
27 Ga0070694_100041066 3300005444 Unclassified 3084
28 Ga0070681_10008505 3300005458 Bacteria 10049
29 Ga0070681_10214791 3300005458 Unclassified 1840
30 Ga0070706_100000123 3300005467 Bacteria 94768
31 Ga0070706_100114181 3300005467 Bacteria 2515
32 Ga0070698_100025912 3300005471 Bacteria 6108
33 Ga0070699_100001112 3300005518 Bacteria 25029
34 Ga0070679_100002083 3300005530 Bacteria 18004
35 Ga0070695_100031444 3300005545 Unclassified 3312
36 Ga0070695_100099958 3300005545 Bacteria 1952
37 Ga0070693_100001166 3300005547 Bacteria 11814
38 Ga0070664_100009162 3300005564 Bacteria 8036
39 Ga0068857_100023827 3300005577 Bacteria 5388
40 Ga0068857_100041399 3300005577 Bacteria 4085
41 Ga0068857_100157370 3300005577 Bacteria 2060
42 Ga0068859_100021634 3300005617 Bacteria 6454
43 Ga0068859_100037384 3300005617 Bacteria 4872
44 Ga0068859_100044663 3300005617 Bacteria 4452
45 Ga0068859_100045990 3300005617 Bacteria 4384
46 Ga0068859_100072323 3300005617 Bacteria 3485
47 Ga0068859_100129774 3300005617 Bacteria 2591
48 Ga0068864_100057729 3300005618 Unclassified 3353
49 Ga0068864_100177542 3300005618 Bacteria 1945
50 Ga0068870_10020590 3300005840 Bacteria 3215
51 Ga0068858_100219230 3300005842 Unclassified 1801
52 Ga0068860_100091511 3300005843 Bacteria 2898
53 Ga0068860_100211077 3300005843 Bacteria 1883
54 Ga0068862_100055944 3300005844 Bacteria 3379
55 Ga0081539_10004814 3300005985 Bacteria 14486
56 Ga0081539_10009875 3300005985 Bacteria 7872
57 Ga0097621_100004497 3300006237 Bacteria 9723
58 Ga0068871_100015330 3300006358 Bacteria 5733
59 Ga0075430_100025593 3300006846 Bacteria 5022
60 Ga0075430_100041403 3300006846 Bacteria 3897
61 Ga0075431_100054516 3300006847 Bacteria 4123
62 Ga0075429_100082860 3300006880 Unclassified 2796
63 Ga0097620_100021634 3300006931 Bacteria 6454
64 Ga0097620_100037384 3300006931 Bacteria 4872
65 Ga0097620_100044663 3300006931 Bacteria 4452
66 Ga0097620_100045989 3300006931 Bacteria 4384
67 Ga0097620_100072320 3300006931 Bacteria 3485
68 Ga0097620_100129777 3300006931 Bacteria 2591
69 Ga0075435_100021721 3300007076 Bacteria 4942
70 Ga0105240_10085598 3300009093 Bacteria 3862
71 Ga0111539_10006898 3300009094 Bacteria 14592
72 Ga0111539_10144946 3300009094 Bacteria 2780
73 Ga0105247_10001616 3300009101 Bacteria 15953
74 Ga0105247_10071113 3300009101 Bacteria 2175
75 Ga0114129_10116547 3300009147 Unclassified 3681
76 Ga0114129_10118265 3300009147 Unclassified 3650
77 Ga0114129_10206141 3300009147 Unclassified 2660
78 Ga0114129_10425205 3300009147 Unclassified 1746
79 Ga0105243_10067913 3300009148 Bacteria 2872
80 Ga0105243_10178143 3300009148 Bacteria 1847
81 Ga0105241_10013300 3300009174 Bacteria 6032
82 Ga0105241_10035227 3300009174 Bacteria 3764
83 Ga0105241_10134830 3300009174 Unclassified 2003
84 Ga0105248_10056069 3300009177 Bacteria 4420
85 Ga0105248_10186652 3300009177 Unclassified 2336
86 Ga0105248_10256494 3300009177 Bacteria 1969
87 Ga0105237_10005281 3300009545 Bacteria 14613
88 Ga0105238_10002142 3300009551 Bacteria 19944
89 Ga0105238_10058054 3300009551 Bacteria 3879
90 Ga0105249_10007477 3300009553 Bacteria 9531
91 Ga0105246_10063369 3300011119 Unclassified 2578
92 Ga0157373_10013952 3300013100 Bacteria 5893
93 Ga0157373_10028957 3300013100 Bacteria 3993
94 Ga0157378_10151133 3300013297 Bacteria 2163
95 Ga0163162_10001957 3300013306 Bacteria 19338
96 Ga0163162_10053363 3300013306 Bacteria 4063
97 Ga0157372_10005673 3300013307 Bacteria 13278
98 Ga0157372_10036949 3300013307 Bacteria 5385
99 Ga0157372_10303467 3300013307 Bacteria 1857
100 Ga0157375_10036592 3300013308 Bacteria 4697
101 Ga0163163_10000223 3300014325 Bacteria 58398
102 Ga0163163_10003244 3300014325 Bacteria 13791
103 Ga0163163_10014349 3300014325 Bacteria 7283
104 Ga0207653_10004901 3300025885 Bacteria 4182
105 Ga0207710_10003392 3300025900 Bacteria 7122
106 Ga0207707_10010055 3300025912 Bacteria 8206
107 Ga0207695_10163390 3300025913 Bacteria 2156
108 Ga0207671_10056090 3300025914 Unclassified 2919
109 Ga0207652_10091324 3300025921 Bacteria 2677
110 Ga0207650_10000017 3300025925 Bacteria 354674
111 Ga0207690_10069395 3300025932 Bacteria 2425
112 Ga0207709_10004054 3300025935 Bacteria 8529
113 Ga0207709_10066596 3300025935 Bacteria 2269
114 Ga0207711_10013881 3300025941 Bacteria 6690
115 Ga0207689_10066016 3300025942 Bacteria 2976
116 Ga0207679_10023665 3300025945 Bacteria 4203
117 Ga0207679_10172057 3300025945 Unclassified 1784
118 Ga0207651_10027460 3300025960 Bacteria 3575
119 Ga0207703_10044769 3300026035 Bacteria 3558
120 Ga0207703_10114053 3300026035 Bacteria 2310
121 Ga0207703_10178559 3300026035 Bacteria 1872
122 Ga0207708_10000040 3300026075 Bacteria 130242
123 Ga0207708_10075290 3300026075 Bacteria 2588
124 Ga0207648_10228537 3300026089 Bacteria 1654
125 Ga0207674_10000713 3300026116 Bacteria 43458
126 Ga0207675_100027558 3300026118 Bacteria 5292
127 Ga0207428_10007741 3300027907 Bacteria 9773
128 Ga0268265_10125066 3300028380 Bacteria 2126
129 Ga0268264_10181831 3300028381 Bacteria 1910
130 Ga0307408_100117356 3300031548 Bacteria 2055
131 Ga0307408_100159784 3300031548 Bacteria 1789
132 Ga0307405_10043655 3300031731 Bacteria 2737
133 Ga0395900_0086044 3300037418 Unclassified 3231
134 Ga0395900_0098581 3300037418 Bacteria 3003
135 Ga0395900_0236475 3300037418 Bacteria 1835
136 Ga0395901_0107471 3300038443 Bacteria 2929
137 Ga0242420_000263 3300038996 Bacteria 5670
138 Ga0496104_0267850 3300048907 Bacteria 1621
139 Ga0496106_0042009 3300048909 Bacteria 3428
140 Ga0496107_0101088 3300048910 Bacteria 2114
141 Ga0496108_0197707 3300048911 Unclassified 1744
142 Ga0496110_0245945 3300048913 Bacteria 1628
143 Ga0496112_0258774 3300048915 Bacteria 1690
144 Ga0501038_0050200 3300049574 Bacteria 3606
145 Ga0501041_0098559 3300049577 Unclassified 1808
146 Ga0501249_012269 3300049679 Bacteria 1810
147 Ga0501221_005145 3300049704 Bacteria 2182
148 Ga0501225_0019507 3300049705 Bacteria 1876
149 Ga0501079_0168170 3300049741 Bacteria 1710
150 Ga0501283_002137 3300049779 Bacteria 2566
151 nmdc:mga05p37_65101_c1 3300050507 Bacteria 4485
152 nmdc:mga08y16_105779_c1 3300050511 Unclassified 2929
153 nmdc:mga08y16_11846_c1 3300050511 Bacteria 9160
154 nmdc:mga08y16_57464_c1 3300050511 Bacteria 4066
155 nmdc:mga0a205_155433_c1 3300050515 Unclassified 2186
156 Ga0530510_0066028 3300061734 Bacteria 2622
157 Ga0065704_10127029
158 MRS1b_contig_7972914
159 JGI24751J29686_10000027
160 JGI24751J29686_10000117
161 JGI25406J46586_10012670
162 Ga0065714_10064464
163 Ga0065712_10000137
164 Ga0065712_10069968
165 Ga0065715_10003552
166 Ga0065715_10089964
167 Ga0065715_10099097
168 Ga0065715_10112054
169 Ga0070670_100000070
170 Ga0068869_100064866
171 Ga0070682_100003235
172 Ga0070682_100003539
173 Ga0070692_10017416
174 Ga0070692_10046782
175 Ga0070669_100119937
176 Ga0070673_100012582
177 Ga0070659_100079906
178 Ga0070703_10005114
179 Ga0070705_100027306
180 Ga0070700_100000022
181 Ga0070694_100026377
182 Ga0070694_100037468
183 Ga0070694_100041066
184 Ga0070681_10008505
185 Ga0070681_10214791
186 Ga0070706_100000123
187 Ga0070706_100114181
188 Ga0070698_100025912
189 Ga0070699_100001112
190 Ga0070679_100002083
191 Ga0070695_100031444
192 Ga0070695_100099958
193 Ga0070693_100001166
194 Ga0070664_100009162
195 Ga0068857_100023827
196 Ga0068857_100041399
197 Ga0068857_100157370
198 Ga0068859_100021634
199 Ga0068859_100037384
200 Ga0068859_100044663
201 Ga0068859_100045990
202 Ga0068859_100072323
203 Ga0068859_100129774
204 Ga0068864_100057729
205 Ga0068864_100177542
206 Ga0068870_10020590
207 Ga0068858_100219230
208 Ga0068860_100091511
209 Ga0068860_100211077
210 Ga0068862_100055944
211 Ga0081539_10004814
212 Ga0081539_10009875
213 Ga0097621_100004497
214 Ga0068871_100015330
215 Ga0075430_100025593
216 Ga0075430_100041403
217 Ga0075431_100054516
218 Ga0075429_100082860
219 Ga0097620_100021634
220 Ga0097620_100037384
221 Ga0097620_100044663
222 Ga0097620_100045989
223 Ga0097620_100072320
224 Ga0097620_100129777
225 Ga0075435_100021721
226 Ga0105240_10085598
227 Ga0111539_10006898
228 Ga0111539_10144946
229 Ga0105247_10001616
230 Ga0105247_10071113
231 Ga0114129_10116547
232 Ga0114129_10118265
233 Ga0114129_10206141
234 Ga0114129_10425205
235 Ga0105243_10067913
236 Ga0105243_10178143
237 Ga0105241_10013300
238 Ga0105241_10035227
239 Ga0105241_10134830
240 Ga0105248_10056069
241 Ga0105248_10186652
242 Ga0105248_10256494
243 Ga0105237_10005281
244 Ga0105238_10002142
245 Ga0105238_10058054
246 Ga0105249_10007477
247 Ga0105246_10063369
248 Ga0157373_10013952
249 Ga0157373_10028957
250 Ga0157378_10151133
251 Ga0163162_10001957
252 Ga0163162_10053363
253 Ga0157372_10005673
254 Ga0157372_10036949
255 Ga0157372_10303467
256 Ga0157375_10036592
257 Ga0163163_10000223
258 Ga0163163_10003244
259 Ga0163163_10014349
260 Ga0207653_10004901
261 Ga0207710_10003392
262 Ga0207707_10010055
263 Ga0207695_10163390
264 Ga0207671_10056090
265 Ga0207652_10091324
266 Ga0207650_10000017
267 Ga0207690_10069395
268 Ga0207709_10004054
269 Ga0207709_10066596
270 Ga0207711_10013881
271 Ga0207689_10066016
272 Ga0207679_10023665
273 Ga0207679_10172057
274 Ga0207651_10027460
275 Ga0207703_10044769
276 Ga0207703_10114053
277 Ga0207703_10178559
278 Ga0207708_10000040
279 Ga0207708_10075290
280 Ga0207648_10228537
281 Ga0207674_10000713
282 Ga0207675_100027558
283 Ga0207428_10007741
284 Ga0268265_10125066
285 Ga0268264_10181831
286 Ga0307408_100117356
287 Ga0307408_100159784
288 Ga0307405_10043655
289 Ga0395900_0086044
290 Ga0395900_0098581
291 Ga0395900_0236475
292 Ga0395901_0107471
293 Ga0242420_000263
294 Ga0496104_0267850
295 Ga0496106_0042009
296 Ga0496107_0101088
297 Ga0496108_0197707
298 Ga0496110_0245945
299 Ga0496112_0258774
300 Ga0501038_0050200
301 Ga0501041_0098559
302 Ga0501249_012269
303 Ga0501221_005145
304 Ga0501225_0019507
305 Ga0501079_0168170
306 Ga0501283_002137
307 nmdc:mga05p37_65101_c1
308 nmdc:mga08y16_105779_c1
309 nmdc:mga08y16_11846_c1
310 nmdc:mga08y16_57464_c1
311 nmdc:mga0a205_155433_c1
312 Ga0530510_0066028

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF11306

DUF3108

Protein of unknown function (DUF3108)

266

499

0.89

PF11306

DUF3108

Protein of unknown function (DUF3108)

18

250

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6ntr-assembly4.cif.gz_D crystal structure of beta-barrel-like protein of domain of unknown function duf1849 from brucella abortus 0.6826 265 473
6ntr-assembly2.cif.gz_B crystal structure of beta-barrel-like protein of domain of unknown function duf1849 from brucella abortus 0.6807 265 473
6ntr-assembly1.cif.gz_A crystal structure of beta-barrel-like protein of domain of unknown function duf1849 from brucella abortus 0.6508 265 473
6ntr-assembly4.cif.gz_D crystal structure of beta-barrel-like protein of domain of unknown function duf1849 from brucella abortus 0.6126 265 473
6ntr-assembly2.cif.gz_B crystal structure of beta-barrel-like protein of domain of unknown function duf1849 from brucella abortus 0.6072 265 473
ID Description Score Start End Superfamily
af_Q54MR5_6_129_3.30.1520.10 Alpha Beta;2-Layer Sandwich;PX Domain;Phox-like domain 0.584 409 450 3.30.1520.10
4on1B01 Mainly Beta;Beta Barrel;Lipocalin; 0.5814 380 465 2.40.128.470
af_Q59001_1_226_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.5691 411 437 3.40.50.2000
3wj2A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Alpha/Beta hydrolase fold, catalytic domain 0.5623 158 192 3.40.50.1820
5f0mC00 Alpha Beta;2-Layer Sandwich;PX Domain;Phox-like domain 0.5619 409 450 3.30.1520.10
ID Description Score Start End GO Terms
AF-A0A0S7WS44-F1-model_v4 DUF3108 domain-containing protein 0.934 261 473
AF-A0A2V9M7H8-F1-model_v4 DUF3108 domain-containing protein 0.9331 260 481
AF-A0A847Q0U4-F1-model_v4 DUF3108 domain-containing protein 0.9325 262 475
AF-A0A7C7VW92-F1-model_v4 DUF3108 domain-containing protein 0.9298 263 475 GO:0016020
AF-A0A2H6EX00-F1-model_v4 DUF3108 domain-containing protein 0.9291 263 474

Map