F222790

General Info

Members Datasets Scaffolds Average Seq Length
155 133 100 342

Family's Representative Sequence

Representative Sequence 3300038705|Ga0237819_03427|Ga0237819_03427_155_1288
Length 377
Sequence MTTSPIPAQESSASWYILLQQLIDGESLSRTQAAELMQGWLSEAVPPELSGAILTALNFKGVSAEELTGMAEVLQSQCSPLPTQHSPLSNATCFKSAEPPNAVAPQHSALSTVIDTCGTGGDGSSTFNISTAVAFVAAAYGIPVAKHGNRSASSLTGSADVLEALGVNLNAPSEKVQAALQEVGITFLFAPGWHPALKAVASLRRTLRVRTVFNLLGPLVNPLQPTGQVVGLFTPKLLATVAQALHNLGKQKAIVLHGREKLDEAGLGDLTDLAVLSDGEVRLTTVNPEEVGLTAAPIGMLRGGDVQENAEILKAVLQGKGTIAQRDAVALNASLALQVAGAIPLLDCAQGVRVAKEILQSGTPWAKLEELVQFLRN

Samples

Sample ID Description Type Environment
1 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
2 2540341094 Bacillus subtilis XF-1 Isolate Rhizosphere
3 2545555800 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
4 2554235283 Bacillus safensis VK Isolate Rhizosphere
5 2576861599 Bacillus amyloliquefaciens EGD-AQ14 Isolate Rhizosphere
6 2617270889 Nostoc punctiforme PCC 73102 Isolate Unclassified
7 2630968484 Bacillus methylotrophicus KACC 13105 Isolate Rhizosphere
8 2643221735 Bacillus sp. Root920 Isolate Unclassified
9 2648501850 Bacillus amyloliquefaciens RHNK22 Isolate Rhizosphere
10 2671180844 Bacillus amyloliquefaciens Bs006 Isolate Unclassified
11 2684623153 Bacillus pumilus SH-B9 Isolate Unclassified
12 2687453109 Bacillus pumilus SH-B11 Isolate Unclassified
13 2695420354 Bacillus sp. Co1-6 Isolate Unclassified
14 2716884898 Bacillus methylotrophicus FKM10 Isolate Rhizosphere
15 2738543010 Bacillus sp. YR335 Isolate Unclassified
16 2808606399 Bacillus sp. SJZ110 Isolate Rhizosphere
17 2811994870 Bacillus sp. JB4 Isolate Unclassified
18 2818991468 Bacillus safensis 3300 Isolate Rhizosphere
19 2823526263 Bacillus altitudinis P-10 Isolate Unclassified
20 2831426010 Nostoc sp. 106C Isolate Unclassified
21 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
22 2849660919 Nostoc sp. T09 Isolate Unclassified
23 2860837431 Bacillus sp. WR11 Isolate Unclassified
24 2877768649 Bacillus amyloliquefaciens Y14 Isolate Rhizosphere
25 2880169592 Bacillus velezensis T20E-257 Isolate Unclassified
26 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
27 2897109615 Bacillus amyloliquefaciens YP6 Isolate Unclassified
28 2904560550 Bacillus velezensis 1780 Isolate Rhizosphere
29 2908665501 Bacillus pumilus 1391 Isolate Rhizosphere
30 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
31 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified
32 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
33 2919093281 Bacillus safensis 1383 Isolate Rhizosphere
34 2919726948 Bacillus pumilus 4489 Isolate Unclassified
35 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
36 2954773129 Bacillus sp. TBS-096 Isolate Rhizosphere
37 2962290636 Bacillus subtilis TLO3 Isolate Rhizosphere
38 2969136845 Bacillus subtilis TLO3 Isolate Rhizosphere
39 2969141011 Bacillus velezensis MH25 Isolate Unclassified
40 2969765954 Bacillus intestinalis GM2 Isolate Rhizosphere
41 2969770375 Bacillus subtilis GM5 Isolate Rhizosphere
42 2971893375 Bacillus sp. HNA3 Isolate Rhizosphere
43 2980492589 Bacillus subtilis GQJK2 Isolate Rhizosphere
44 3006879489 Bacillus atrophaeus UCMB-5137 Isolate Rhizosphere
45 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
46 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
47 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
48 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
49 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
50 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
51 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
52 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
53 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
54 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
55 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
56 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
57 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
58 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
59 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
71 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
72 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
73 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
74 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
75 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
76 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
77 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
78 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
79 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
80 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
81 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
82 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
83 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
84 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
85 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
86 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
87 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
88 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
89 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
90 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
91 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
92 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
93 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
94 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
95 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
96 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
97 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
98 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
99 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
100 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
101 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
102 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
103 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
104 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
105 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
106 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
109 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
110 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
111 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
113 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
117 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
118 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
119 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
120 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
121 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
122 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
125 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
126 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
127 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
128 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified
129 8022630665 Bacillus sp. PW192 Isolate Rhizosphere
130 8022653035 Bacillus sp. Rc4 Isolate Unclassified
131 8051952484 Bacillus amyloliquefaciens K2 Isolate Rhizosphere
132 8052174270 Bacillus velezensis CH13 Isolate Rhizosphere
133 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 62.58
Metatranscriptomes 1.94
Isolates 35.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.94
Nodule 0
Rhizoplane 0.65
Rhizosphere 72.9
Stem 0
Stem Tuber 0
Unclassified 24.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000006 3300003187 Bacteria 419711
2 JGI25151J46595_10000029 3300003187 Bacteria 205878
3 Ga0006562J51391_1001112 3300003578 Bacteria 17420
4 Ga0070658_10176931 3300005327 Bacteria 1795
5 Ga0070683_100068985 3300005329 Bacteria 3295
6 Ga0070690_100076995 3300005330 Bacteria 2177
7 Ga0070666_10002891 3300005335 Bacteria 10367
8 Ga0070682_100012056 3300005337 Bacteria 4946
9 Ga0070659_100270696 3300005366 Bacteria 1411
10 Ga0070667_100119719 3300005367 Bacteria 2290
11 Ga0070710_10023006 3300005437 Bacteria 3269
12 Ga0070681_10335201 3300005458 Bacteria 1422
13 Ga0070698_100043537 3300005471 Bacteria 4602
14 Ga0070684_100307276 3300005535 Bacteria 1456
15 Ga0068852_100225504 3300005616 Bacteria 1784
16 Ga0075436_100000337 3300006914 Bacteria 30021
17 Ga0111539_10269236 3300009094 Bacteria 1983
18 Ga0105247_10011740 3300009101 Bacteria 5269
19 Ga0209025_1000001 3300025294 Bacteria 1888151
20 Ga0207692_10016422 3300025898 Bacteria 3279
21 Ga0207710_10012325 3300025900 Bacteria 3597
22 Ga0207705_10099736 3300025909 Bacteria 2135
23 Ga0207681_10000009 3300025923 Bacteria 410736
24 Ga0207661_10034288 3300025944 Bacteria 3946
25 Ga0207658_10134499 3300025986 Bacteria 1991
26 Ga0207675_100341621 3300026118 Bacteria 1466
27 Ga0265319_1003712 3300028563 Bacteria 7851
28 Ga0265318_10000544 3300028577 Bacteria 26815
29 Ga0265318_10002055 3300028577 Bacteria 11057
30 Ga0265330_10000130 3300031235 Bacteria 60078
31 Ga0265332_10000338 3300031238 Bacteria 35493
32 Ga0265328_10002196 3300031239 Bacteria 8808
33 Ga0265320_10004139 3300031240 Bacteria 9529
34 Ga0265325_10000401 3300031241 Bacteria 30694
35 Ga0265329_10000280 3300031242 Bacteria 27005
36 Ga0265340_10001162 3300031247 Bacteria 15080
37 Ga0265339_10002070 3300031249 Bacteria 14698
38 Ga0265331_10002010 3300031250 Bacteria 14148
39 Ga0265331_10036704 3300031250 Bacteria 2405
40 Ga0265316_10000689 3300031344 Bacteria 37558
41 Ga0265316_10004320 3300031344 Bacteria 14180
42 Ga0265313_10000128 3300031595 Bacteria 76766
43 Ga0265313_10003604 3300031595 Bacteria 12448
44 Ga0307508_10020602 3300031616 Bacteria 5988
45 Ga0316579_10008651 3300031691 Bacteria 4251
46 Ga0316579_10024852 3300031691 Bacteria 2700
47 Ga0316579_10097642 3300031691 Unclassified 1405
48 Ga0265314_10002004 3300031711 Bacteria 21613
49 Ga0265314_10012758 3300031711 Bacteria 6829
50 Ga0265342_10000695 3300031712 Bacteria 35276
51 Ga0316576_10024892 3300031727 Bacteria 4184
52 Ga0316583_10009051 3300032133 Bacteria 3591
53 Ga0373929_0000008 3300035085 Bacteria 298561
54 Ga0373961_0000467 3300035241 Bacteria 15987
55 Ga0316574_0013754 3300035398 Bacteria 4661
56 Ga0316574_0018546 3300035398 Bacteria 4091
57 Ga0373931_0177475 3300035691 Bacteria 1259
58 Ga0373935_0003057 3300035692 Bacteria 9641
59 Ga0373927_0070719 3300035695 Bacteria 2259
60 Ga0373933_0035395 3300035724 Bacteria 2916
61 Ga0373937_0049633 3300036401 Bacteria 3842
62 Ga0373937_0135409 3300036401 Bacteria 2303
63 Ga0316584_0113056 3300036712 Bacteria 2031
64 Ga0316584_0162064 3300036712 Bacteria 1661
65 Ga0316581_0005119 3300037588 Bacteria 3393
66 Ga0237819_03109 3300038705 Bacteria 3043
67 Ga0237819_03427 3300038705 Bacteria 2816
68 Ga0400489_12470 3300039093 Unclassified 1512
69 Ga0400489_17078 3300039093 Bacteria 1895
70 Ga0451837_0465568 3300041494 Bacteria 1726
71 Ga0451577_0000175 3300042876 Bacteria 141754
72 Ga0451577_0074380 3300042876 Bacteria 3030
73 Ga0453683_0095076 3300044673 Bacteria 1870
74 Ga0453684_0000004 3300044712 Bacteria 1469893
75 Ga0453684_0014931 3300044712 Bacteria 12347
76 Ga0453684_0258370 3300044712 Bacteria 1997
77 Ga0466959_0177715 3300045049 Bacteria 1490
78 Ga0451576_0239094 3300045051 Bacteria 1897
79 Ga0495628_0116878 3300046516 Bacteria 2048
80 Ga0496114_0000004 3300048917 Bacteria 591126
81 Ga0496124_0235649 3300048927 Bacteria 1365
82 Ga0496125_0002624 3300048928 Bacteria 23043
83 Ga0501305_001456 3300049161 Bacteria 2321
84 Ga0501335_004308 3300049551 Bacteria 1238
85 Ga0501031_0125947 3300049568 Bacteria 1674
86 Ga0501036_0082453 3300049572 Bacteria 2718
87 Ga0501041_0019525 3300049577 Bacteria 4048
88 Ga0501067_0052145 3300049583 Bacteria 2266
89 Ga0501068_0002892 3300049584 Bacteria 9138
90 Ga0501075_0000517 3300049591 Bacteria 23323
91 Ga0501075_0043586 3300049591 Bacteria 3365
92 Ga0501077_0000046 3300049593 Bacteria 62239
93 Ga0501257_008338 3300049686 Bacteria 2327
94 Ga0501080_0024755 3300049742 Bacteria 5567
95 Ga0501081_0026311 3300049743 Bacteria 3922
96 Ga0501045_0136143 3300049824 Bacteria 1826
97 nmdc:mga0n895_53843_c1 3300050512 Bacteria 3955
98 nmdc:mga08x19_58_c1 3300050514 Bacteria 118064
99 Ga0501082_0000039 3300060353 Bacteria 92567
100 Ga0530510_0007920 3300061734 Bacteria 7412

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035691 Ga0373931_0177475 Ga0373931_0177475_143_1195 298
2 3300049577 Ga0501041_0019525 Ga0501041_0019525_273_1472 315
3 3300049591 Ga0501075_0043586 Ga0501075_0043586_1691_2890 315
4 3300049743 Ga0501081_0026311 Ga0501081_0026311_61_1260 315
5 3300049161 Ga0501305_001456 Ga0501305_001456_13_963 316
6 3300049824 Ga0501045_0136143 Ga0501045_0136143_470_1675 317
7 3300009094 Ga0111539_10269236 Ga0111539_102692363 318
8 3300049572 Ga0501036_0082453 Ga0501036_0082453_56_1261 318
9 3300035695 Ga0373927_0070719 Ga0373927_0070719_933_1970 323
10 3300035398 Ga0316574_0013754 Ga0316574_0013754_1582_2598 324
11 3300031691 Ga0316579_10097642 Ga0316579_100976422 326
12 3300037588 Ga0316581_0005119 Ga0316581_0005119_25_1044 326
13 3300049568 Ga0501031_0125947 Ga0501031_0125947_430_1572 327
14 3300045051 Ga0451576_0239094 Ga0451576_0239094_691_1716 328
15 iso_pu_bacteria 2540341094 2540607201 328
16 3300031711 Ga0265314_10002004 Ga0265314_100020043 329
17 iso_pu_bacteria 642555144 642600469 329
18 3300009101 Ga0105247_10011740 Ga0105247_100117405 330
19 3300025900 Ga0207710_10012325 Ga0207710_100123253 330
20 3300035692 Ga0373935_0003057 Ga0373935_0003057_4573_5664 330
21 3300005330 Ga0070690_100076995 Ga0070690_1000769953 332
22 3300005335 Ga0070666_10002891 Ga0070666_100028915 332
23 3300005471 Ga0070698_100043537 Ga0070698_1000435373 332
24 3300005616 Ga0068852_100225504 Ga0068852_1002255042 332
25 3300025909 Ga0207705_10099736 Ga0207705_100997362 332
26 3300025923 Ga0207681_10000009 Ga0207681_1000000933 332
27 3300026118 Ga0207675_100341621 Ga0207675_1003416212 332
28 3300005437 Ga0070710_10023006 Ga0070710_100230062 333
29 3300006914 Ga0075436_100000337 Ga0075436_1000003374 333
30 3300025898 Ga0207692_10016422 Ga0207692_100164222 333
31 3300035085 Ga0373929_0000008 Ga0373929_0000008_241572_242600 333
32 3300035241 Ga0373961_0000467 Ga0373961_0000467_10460_11473 333
33 3300036401 Ga0373937_0135409 Ga0373937_0135409_214_1311 333
34 3300041494 Ga0451837_0465568 Ga0451837_0465568_584_1609 333
35 3300044673 Ga0453683_0095076 Ga0453683_0095076_702_1748 333
36 3300049583 Ga0501067_0052145 Ga0501067_0052145_200_1213 333
37 3300049584 Ga0501068_0002892 Ga0501068_0002892_6016_7029 333
38 3300049591 Ga0501075_0000517 Ga0501075_0000517_4349_5362 333
39 3300049593 Ga0501077_0000046 Ga0501077_0000046_11113_12126 333
40 3300049742 Ga0501080_0024755 Ga0501080_0024755_2236_3249 333
41 3300050512 nmdc:mga0n895_53843_c1 nmdc:mga0n895_53843_c1_1843_2856 333
42 3300050514 nmdc:mga08x19_58_c1 nmdc:mga08x19_58_c1_35563_36576 333
43 3300060353 Ga0501082_0000039 Ga0501082_0000039_75678_76691 333
44 3300061734 Ga0530510_0007920 Ga0530510_0007920_5859_6902 333
45 iso_pu_bacteria 2617270889 2617916523 333
46 iso_pu_bacteria 2913939268 2913940192 333
47 iso_pu_bacteria 642555144 642600533 333
48 3300038705 Ga0237819_03109 Ga0237819_03109_383_1480 334
49 3300042876 Ga0451577_0000175 Ga0451577_0000175_137287_138297 334
50 3300042876 Ga0451577_0074380 Ga0451577_0074380_1185_2210 334
51 3300044712 Ga0453684_0000004 Ga0453684_0000004_439068_440078 334
52 3300044712 Ga0453684_0258370 Ga0453684_0258370_30_1055 334
53 3300049686 Ga0501257_008338 Ga0501257_008338_691_1806 334
54 iso_pu_bacteria 2545555800 2545556724 334
55 iso_pu_bacteria 2576861599 2578930973 334
56 iso_pu_bacteria 2630968484 2631984364 334
57 iso_pu_bacteria 2648501850 2651532083 334
58 iso_pu_bacteria 2671180844 2674419143 334
59 iso_pu_bacteria 2695420354 2695628016 334
60 iso_pu_bacteria 2716884898 2717916270 334
61 iso_pu_bacteria 2738543010 2739230508 334
62 iso_pu_bacteria 2808606399 2809057033 334
63 iso_pu_bacteria 2831426010 2831428458 334
64 iso_pu_bacteria 2860837431 2860839884 334
65 iso_pu_bacteria 2877768649 2877770919 334
66 iso_pu_bacteria 2880169592 2880171784 334
67 iso_pu_bacteria 2886627955 2886632275 334
68 iso_pu_bacteria 2897109615 2897112009 334
69 iso_pu_bacteria 2904560550 2904561874 334
70 iso_pu_bacteria 2913912277 2913920091 334
71 iso_pu_bacteria 2941485952 2941488490 334
72 iso_pu_bacteria 2962290636 2962293154 334
73 iso_pu_bacteria 2969136845 2969139167 334
74 iso_pu_bacteria 2969141011 2969143366 334
75 iso_pu_bacteria 2969765954 2969767131 334
76 iso_pu_bacteria 2969770375 2969773553 334
77 iso_pu_bacteria 2971893375 2971895564 334
78 iso_pu_bacteria 2980492589 2980494899 334
79 iso_pu_bacteria 3006879489 3006881387 334
80 iso_pu_bacteria 8022630665 8022633619 334
81 iso_pu_bacteria 8022653035 8022657394 334
82 iso_pu_bacteria 8051952484 8051955496 334
83 iso_pu_bacteria 8052174270 8052176791 334
84 iso_pu_bacteria 8054280661 8054281473 334
85 3300005327 Ga0070658_10176931 Ga0070658_101769311 335
86 3300005458 Ga0070681_10335201 Ga0070681_103352012 335
87 3300028563 Ga0265319_1003712 Ga0265319_10037123 335
88 3300028577 Ga0265318_10000544 Ga0265318_1000054420 335
89 3300028577 Ga0265318_10002055 Ga0265318_100020556 335
90 3300031235 Ga0265330_10000130 Ga0265330_1000013041 335
91 3300031238 Ga0265332_10000338 Ga0265332_100003386 335
92 3300031239 Ga0265328_10002196 Ga0265328_100021964 335
93 3300031240 Ga0265320_10004139 Ga0265320_100041396 335
94 3300031241 Ga0265325_10000401 Ga0265325_1000040115 335
95 3300031242 Ga0265329_10000280 Ga0265329_1000028020 335
96 3300031247 Ga0265340_10001162 Ga0265340_100011629 335
97 3300031249 Ga0265339_10002070 Ga0265339_100020708 335
98 3300031250 Ga0265331_10002010 Ga0265331_100020106 335
99 3300031250 Ga0265331_10036704 Ga0265331_100367042 335
100 3300031344 Ga0265316_10000689 Ga0265316_1000068913 335
101 3300031344 Ga0265316_10004320 Ga0265316_100043206 335
102 3300031595 Ga0265313_10000128 Ga0265313_1000012857 335
103 3300031595 Ga0265313_10003604 Ga0265313_100036043 335
104 3300031691 Ga0316579_10008651 Ga0316579_100086512 335
105 3300031711 Ga0265314_10012758 Ga0265314_100127584 335
106 3300031712 Ga0265342_10000695 Ga0265342_1000069520 335
107 3300031727 Ga0316576_10024892 Ga0316576_100248923 335
108 3300032133 Ga0316583_10009051 Ga0316583_100090513 335
109 3300035724 Ga0373933_0035395 Ga0373933_0035395_1359_2390 335
110 3300036401 Ga0373937_0049633 Ga0373937_0049633_1930_2997 335
111 3300036712 Ga0316584_0162064 Ga0316584_0162064_336_1352 335
112 3300038705 Ga0237819_03427 Ga0237819_03427_155_1288 335
113 3300044712 Ga0453684_0014931 Ga0453684_0014931_219_1304 335
114 3300045049 Ga0466959_0177715 Ga0466959_0177715_425_1465 335
115 3300046516 Ga0495628_0116878 Ga0495628_0116878_948_1979 335
116 3300048927 Ga0496124_0235649 Ga0496124_0235649_259_1299 335
117 3300048928 Ga0496125_0002624 Ga0496125_0002624_1272_2309 335
118 iso_pu_bacteria 2617270889 2617911915 335
119 iso_pu_bacteria 2831426010 2831431510 335
120 iso_pu_bacteria 2848694841 2848698904 335
121 iso_pu_bacteria 2849660919 2849667419 335
122 iso_pu_bacteria 2886627955 2886634729 335
123 iso_pu_bacteria 2913844669 2913849625 335
124 iso_pu_bacteria 2913844669 2913851028 335
125 3300005367 Ga0070667_100119719 Ga0070667_1001197193 336
126 3300025986 Ga0207658_10134499 Ga0207658_101344992 336
127 3300031616 Ga0307508_10020602 Ga0307508_100206023 336
128 3300031691 Ga0316579_10024852 Ga0316579_100248522 336
129 3300035398 Ga0316574_0018546 Ga0316574_0018546_264_1307 336
130 3300036712 Ga0316584_0113056 Ga0316584_0113056_79_1122 336
131 3300039093 Ga0400489_12470 Ga0400489_12470_190_1218 336
132 3300039093 Ga0400489_17078 Ga0400489_17078_194_1210 336
133 3300048917 Ga0496114_0000004 Ga0496114_0000004_255960_256985 336
134 iso_pu_bacteria 2524023250 2524612122 336
135 iso_pu_bacteria 2554235283 2555467440 336
136 iso_pu_bacteria 2643221735 2644740614 336
137 iso_pu_bacteria 2684623153 2686997266 336
138 iso_pu_bacteria 2687453109 2687498573 336
139 iso_pu_bacteria 2811994870 2812316458 336
140 iso_pu_bacteria 2818991468 2819723527 336
141 iso_pu_bacteria 2823526263 2823528439 336
142 iso_pu_bacteria 2908665501 2908668357 336
143 iso_pu_bacteria 2919093281 2919096126 336
144 iso_pu_bacteria 2919726948 2919728156 336
145 iso_pu_bacteria 2954773129 2954774046 336
146 3300049551 Ga0501335_004308 Ga0501335_004308_18_1034 338
147 3300005329 Ga0070683_100068985 Ga0070683_1000689853 339
148 3300005337 Ga0070682_100012056 Ga0070682_1000120562 339
149 3300005366 Ga0070659_100270696 Ga0070659_1002706962 339
150 3300005535 Ga0070684_100307276 Ga0070684_1003072762 339
151 3300025944 Ga0207661_10034288 Ga0207661_100342882 339
152 3300003187 JGI25151J46595_10000006 JGI25151J46595_10000006158 340
153 3300003187 JGI25151J46595_10000029 JGI25151J46595_10000029194 340
154 3300003578 Ga0006562J51391_1001112 Ga0006562J51391_100111214 340
155 3300025294 Ga0209025_1000001 Ga0209025_1000001837 340

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00591

Glycos_transf_3

Glycosyl transferase family, a/b domain

110

365

0.98

PF02885

Glycos_trans_3N

Glycosyl transferase family, helical bundle domain

16

78

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gbr-assembly1.cif.gz_A anthranilate phosphoribosyl-transferase (trpd) double mutant d83g f149s from s. solfataricus 0.9745 2 329
1zyk-assembly2.cif.gz_B anthranilate phosphoribosyltransferase in complex with prpp, anthranilate and magnesium 0.9743 2 330
3gbr-assembly1.cif.gz_B anthranilate phosphoribosyl-transferase (trpd) double mutant d83g f149s from s. solfataricus 0.9732 2 329
2gvq-assembly2.cif.gz_B anthranilate phosphoribosyl-transferase (trpd) from s. solfataricus in complex with anthranilate 0.9663 2 329
1gxb-assembly2.cif.gz_B-3 anthranilate phosphoribosyltransferase in complex with pyrophosphate and magnesium 0.9662 2 329
ID Description Score Start End Superfamily
1kgzA01 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.9773 5 182 1.20.970.10
af_Q57686_71_335_3.40.1030.10 Alpha Beta;3-Layer(aba) Sandwich;Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2;Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.9764 72 330 3.40.1030.10
1gxbA01 Mainly Alpha;Up-down Bundle;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3;Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.9751 2 181 1.20.970.10
af_K7WHC8_126_393_3.40.1030.10 Alpha Beta;3-Layer(aba) Sandwich;Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2;Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.9707 72 334 3.40.1030.10
af_P00904_275_530_3.40.1030.10 Alpha Beta;3-Layer(aba) Sandwich;Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2;Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.97 75 330 3.40.1030.10
ID Description Score Start End GO Terms
AF-A0A1I1V072-F1-model_v4 deleted 0.9845 2 330
AF-F8L7Z3-F1-model_v4 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.9836 2 330 GO:0000162
GO:0000287
GO:0004048
GO:0005829
AF-A0A847WLX1-F1-model_v4 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.9836 5 330 GO:0000162
GO:0000287
GO:0004048
GO:0005829
AF-A0A6L7WCK9-F1-model_v4 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.9836 2 237 GO:0000162
GO:0004048
GO:0005829
AF-B6BW45-F1-model_v4 Anthranilate phosphoribosyltransferase (EC 2.4.2.18) 0.9833 1 330 GO:0000162
GO:0000287
GO:0004048
GO:0005829

Feature Viewer

pLDDT pTM Quality
91.43 0.91 High
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Predicted Structure (AlphaFold2)

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