F220789

General Info

Members Datasets Scaffolds Average Seq Length
154 124 154 160

Family's Representative Sequence

Representative Sequence 3300053080|Ga0500635_0000137|Ga0500635_0000137_26873_27445
Length 190
Sequence MRRCSLESPAGIEVRDRTRQNPRIGNGSGIFHMGDNTFDGGCDCRAVRYRLHARPMFVHCCHCRWCQRESGTAFALNALIETDRVEMLGGPVDVVDTPSNSGQGQRIARCPACRIALWSHYGGNPQLSFIRVGSLDEPDNFPPDIHIFTSTKQPWFQLPDGVPAVAEYYSSSKMWPAESLERRKALFPPK

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
37 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
50 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
51 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
71 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
72 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
73 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
74 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
75 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
76 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
77 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
78 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
82 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
83 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
86 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
87 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
88 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
89 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
90 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
93 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
94 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
95 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
96 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
97 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
98 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
103 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
104 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
105 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
106 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
107 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
108 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
114 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
115 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
116 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
117 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
118 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
119 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
120 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
121 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
122 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
123 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
124 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.84
Nodule 0
Rhizoplane 0.65
Rhizosphere 87.66
Stem 0
Stem Tuber 0
Unclassified 5.84

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10148678 3300003323 Bacteria 1457
2 Ga0065715_10149298 3300005293 Bacteria 1749
3 Ga0070658_10026202 3300005327 Bacteria 4677
4 Ga0070676_10384412 3300005328 Bacteria 973
5 Ga0070690_100446042 3300005330 Bacteria 958
6 Ga0070670_100017740 3300005331 Bacteria 6107
7 Ga0068869_100200968 3300005334 Bacteria 1572
8 Ga0070660_100063297 3300005339 Bacteria 2875
9 Ga0070689_100036852 3300005340 Bacteria 3740
10 Ga0070689_100111752 3300005340 Bacteria 2174
11 Ga0070669_100133918 3300005353 Bacteria 1904
12 Ga0070675_100387525 3300005354 Bacteria 1245
13 Ga0070671_101464761 3300005355 Bacteria 604
14 Ga0070674_100085567 3300005356 Bacteria 2263
15 Ga0070674_100177635 3300005356 Bacteria 1628
16 Ga0070674_101151149 3300005356 Bacteria 687
17 Ga0070673_100252111 3300005364 Bacteria 1539
18 Ga0070673_100315863 3300005364 Bacteria 1379
19 Ga0070659_100032248 3300005366 Bacteria 4062
20 Ga0070659_100427601 3300005366 Bacteria 1121
21 Ga0070659_100982321 3300005366 Bacteria 741
22 Ga0070709_10066727 3300005434 Bacteria 2309
23 Ga0070711_100022214 3300005439 Bacteria 4110
24 Ga0070705_100342469 3300005440 Bacteria 1087
25 Ga0070700_100723791 3300005441 Bacteria 794
26 Ga0070678_100056803 3300005456 Bacteria 2864
27 Ga0070699_100580885 3300005518 Bacteria 1021
28 Ga0070695_100005476 3300005545 Bacteria 7475
29 Ga0070695_100304004 3300005545 Bacteria 1180
30 Ga0070696_100002562 3300005546 Bacteria 12040
31 Ga0070696_101431996 3300005546 Bacteria 590
32 Ga0070693_100000942 3300005547 Bacteria 12905
33 Ga0068855_100315270 3300005563 Bacteria 1730
34 Ga0070702_100119078 3300005615 Bacteria 1650
35 Ga0068864_100443863 3300005618 Bacteria 1240
36 Ga0068858_100942895 3300005842 Bacteria 845
37 Ga0075363_100792357 3300006048 Bacteria 576
38 Ga0097621_100041548 3300006237 Bacteria 3701
39 Ga0075370_10014579 3300006353 Bacteria 4196
40 Ga0068871_100290487 3300006358 Unclassified 1433
41 Ga0068871_100583238 3300006358 Unclassified 1015
42 Ga0105240_11841264 3300009093 Bacteria 630
43 Ga0105243_10025609 3300009148 Bacteria 4509
44 Ga0105243_10250537 3300009148 Bacteria 1581
45 Ga0105248_10010843 3300009177 Bacteria 10063
46 Ga0105248_10944192 3300009177 Bacteria 974
47 Ga0105237_11108685 3300009545 Bacteria 798
48 Ga0157370_10131852 3300013104 Bacteria 2331
49 Ga0157374_11298376 3300013296 Bacteria 750
50 Ga0157378_10013668 3300013297 Bacteria 7100
51 Ga0163162_10000021 3300013306 Bacteria 214873
52 Ga0157372_10579685 3300013307 Bacteria 1307
53 Ga0157375_10703577 3300013308 Bacteria 1164
54 Ga0157380_10513337 3300014326 Bacteria 1167
55 Ga0182008_10537221 3300014497 Bacteria 648
56 Ga0157377_10262434 3300014745 Bacteria 1124
57 Ga0157376_10257148 3300014969 Bacteria 1634
58 Ga0157376_10293568 3300014969 Bacteria 1536
59 Ga0157376_10803070 3300014969 Bacteria 954
60 Ga0163161_10566935 3300017792 Bacteria 932
61 Ga0209563_118545 3300025230 Bacteria 815
62 Ga0209759_1017787 3300025256 Bacteria 1739
63 Ga0207426_1018843 3300025302 Bacteria 2424
64 Ga0207685_10383303 3300025905 Bacteria 717
65 Ga0207699_10109609 3300025906 Bacteria 1767
66 Ga0207705_10204565 3300025909 Bacteria 1496
67 Ga0207695_10185780 3300025913 Bacteria 1998
68 Ga0207695_10237467 3300025913 Bacteria 1725
69 Ga0207662_10238115 3300025918 Bacteria 1191
70 Ga0207657_10010555 3300025919 Bacteria 9210
71 Ga0207650_10021880 3300025925 Bacteria 4524
72 Ga0207690_10239031 3300025932 Bacteria 1398
73 Ga0207690_10594210 3300025932 Bacteria 903
74 Ga0207709_10014432 3300025935 Bacteria 4362
75 Ga0207709_10513439 3300025935 Bacteria 937
76 Ga0207670_10017948 3300025936 Bacteria 4287
77 Ga0207670_10049735 3300025936 Bacteria 2805
78 Ga0207669_10168183 3300025937 Bacteria 1557
79 Ga0207669_11491490 3300025937 Bacteria 576
80 Ga0207704_11234579 3300025938 Bacteria 638
81 Ga0207711_11067382 3300025941 Bacteria 748
82 Ga0207689_10076977 3300025942 Bacteria 2742
83 Ga0207667_10717123 3300025949 Bacteria 1001
84 Ga0207667_11801795 3300025949 Bacteria 576
85 Ga0207651_10078846 3300025960 Bacteria 2364
86 Ga0207651_10498472 3300025960 Bacteria 1052
87 Ga0207712_11066815 3300025961 Bacteria 718
88 Ga0207640_10479908 3300025981 Bacteria 1031
89 Ga0207683_10015001 3300026121 Bacteria 6595
90 Ga0307517_10100247 3300028786 Bacteria 2289
91 Ga0265332_10080190 3300031238 Bacteria 1385
92 Ga0307509_10113417 3300031507 Bacteria 2708
93 Ga0307508_10155788 3300031616 Bacteria 1888
94 Ga0316578_10163380 3300031728 Bacteria 1342
95 Ga0307516_10005021 3300031730 Bacteria 16023
96 Ga0307405_10201193 3300031731 Bacteria 1447
97 Ga0307413_10390343 3300031824 Bacteria 1087
98 Ga0307413_10967530 3300031824 Bacteria 727
99 Ga0307407_10133839 3300031903 Bacteria 1590
100 Ga0307409_101159482 3300031995 Bacteria 795
101 Ga0307414_10030619 3300032004 Bacteria 3518
102 Ga0307414_10466607 3300032004 Bacteria 1111
103 Ga0307411_10744018 3300032005 Bacteria 858
104 Ga0373931_0054481 3300035691 Bacteria 2137
105 Ga0373931_0373287 3300035691 Bacteria 897
106 Ga0373927_0151789 3300035695 Bacteria 1517
107 Ga0373937_0007536 3300036401 Bacteria 9424
108 Ga0373925_0177124 3300037068 Bacteria 1686
109 Ga0395899_0062194 3300037312 Bacteria 2749
110 Ga0395900_0032896 3300037418 Bacteria 5335
111 Ga0395900_0109532 3300037418 Bacteria 2837
112 Ga0395898_0016340 3300037466 Bacteria 7596
113 Ga0395905_0001134 3300037471 Bacteria 33337
114 Ga0395905_0097709 3300037471 Bacteria 2757
115 Ga0395905_0106577 3300037471 Bacteria 2631
116 Ga0395901_0058614 3300038443 Bacteria 4005
117 Ga0395901_0077072 3300038443 Bacteria 3479
118 Ga0436365_0715480 3300039437 Bacteria 1110
119 Ga0436365_1235555 3300039437 Bacteria 654
120 Ga0436360_0161583 3300039438 Bacteria 870
121 Ga0451841_0133723 3300041498 Bacteria 812
122 Ga0466960_0047027 3300044901 Bacteria 2068
123 Ga0495592_0029340 3300046454 Bacteria 4166
124 Ga0495651_0019759 3300046462 Bacteria 5223
125 Ga0495608_0012008 3300046511 Bacteria 6022
126 Ga0495608_0645343 3300046511 Bacteria 633
127 Ga0495628_0378923 3300046516 Unclassified 1036
128 Ga0495652_0060968 3300046529 Bacteria 3186
129 Ga0495587_0006676 3300046536 Bacteria 7514
130 Ga0495645_0009096 3300046543 Bacteria 6940
131 Ga0495667_0010737 3300046559 Bacteria 6193
132 Ga0495635_0008700 3300046663 Bacteria 7090
133 Ga0495657_0205195 3300046675 Unclassified 1200
134 Ga0495599_0020561 3300046678 Bacteria 4111
135 Ga0495623_0001427 3300046679 Bacteria 16192
136 Ga0495658_0799795 3300046683 Unclassified 604
137 Ga0495670_0335257 3300046691 Bacteria 813
138 Ga0495600_0164934 3300046809 Bacteria 1431
139 Ga0495683_0089068 3300047323 Bacteria 1497
140 Ga0496105_0291942 3300048908 Bacteria 1312
141 Ga0501034_0001445 3300049571 Bacteria 31511
142 Ga0501034_0004106 3300049571 Bacteria 16341
143 Ga0501068_0049134 3300049584 Bacteria 2547
144 Ga0501070_0294221 3300049586 Bacteria 1323
145 Ga0501072_1294604 3300049588 Bacteria 565
146 Ga0501044_0317785 3300049823 Bacteria 1482
147 nmdc:mga0k408_601749_c1 3300050493 Bacteria 648
148 Ga0495601_0014838 3300053077 Bacteria 4702
149 Ga0500635_0000137 3300053080 Bacteria 42016
150 Ga0495595_0027030 3300053084 Bacteria 2554
151 Ga0500608_193852 3300053122 Bacteria 847
152 Ga0500559_0059725 3300053136 Bacteria 1698
153 Ga0500661_013863 3300055283 Bacteria 1452
154 Ga0501082_1550588 3300060353 Bacteria 578

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300060353 Ga0501082_1550588 Ga0501082_1550588_153_560 134
2 3300050493 nmdc:mga0k408_601749_c1 nmdc:mga0k408_601749_c1_13_435 139
3 3300035691 Ga0373931_0373287 Ga0373931_0373287_427_864 141
4 3300035695 Ga0373927_0151789 Ga0373927_0151789_1049_1483 141
5 3300053136 Ga0500559_0059725 Ga0500559_0059725_1168_1605 141
6 3300046462 Ga0495651_0019759 Ga0495651_0019759_3996_4439 146
7 3300025961 Ga0207712_11066815 Ga0207712_110668152 154
8 3300039437 Ga0436365_0715480 Ga0436365_0715480_528_995 154
9 3300046511 Ga0495608_0645343 Ga0495608_0645343_148_615 154
10 3300005356 Ga0070674_100085567 Ga0070674_1000855673 155
11 3300005546 Ga0070696_101431996 Ga0070696_1014319961 155
12 3300009148 Ga0105243_10250537 Ga0105243_102505373 155
13 3300014969 Ga0157376_10257148 Ga0157376_102571482 155
14 3300025935 Ga0207709_10513439 Ga0207709_105134392 155
15 3300025937 Ga0207669_10168183 Ga0207669_101681832 155
16 3300025938 Ga0207704_11234579 Ga0207704_112345791 155
17 3300025941 Ga0207711_11067382 Ga0207711_110673822 155
18 3300005440 Ga0070705_100342469 Ga0070705_1003424692 156
19 3300005518 Ga0070699_100580885 Ga0070699_1005808852 156
20 3300005545 Ga0070695_100005476 Ga0070695_1000054763 156
21 3300025906 Ga0207699_10109609 Ga0207699_101096093 156
22 3300037471 Ga0395905_0001134 Ga0395905_0001134_21973_22446 156
23 3300053122 Ga0500608_193852 Ga0500608_193852_230_703 156
24 3300055283 Ga0500661_013863 Ga0500661_013863_136_609 156
25 3300005330 Ga0070690_100446042 Ga0070690_1004460421 157
26 3300005334 Ga0068869_100200968 Ga0068869_1002009683 157
27 3300005339 Ga0070660_100063297 Ga0070660_1000632973 157
28 3300005340 Ga0070689_100036852 Ga0070689_1000368522 157
29 3300005340 Ga0070689_100111752 Ga0070689_1001117523 157
30 3300005364 Ga0070673_100252111 Ga0070673_1002521113 157
31 3300005364 Ga0070673_100315863 Ga0070673_1003158631 157
32 3300005366 Ga0070659_100032248 Ga0070659_1000322482 157
33 3300005547 Ga0070693_100000942 Ga0070693_1000009427 157
34 3300005615 Ga0070702_100119078 Ga0070702_1001190783 157
35 3300005618 Ga0068864_100443863 Ga0068864_1004438633 157
36 3300006237 Ga0097621_100041548 Ga0097621_1000415482 157
37 3300006358 Ga0068871_100290487 Ga0068871_1002904873 157
38 3300009177 Ga0105248_10010843 Ga0105248_100108433 157
39 3300009545 Ga0105237_11108685 Ga0105237_111086852 157
40 3300013296 Ga0157374_11298376 Ga0157374_112983762 157
41 3300013297 Ga0157378_10013668 Ga0157378_1001366810 157
42 3300014969 Ga0157376_10293568 Ga0157376_102935683 157
43 3300025230 Ga0209563_118545 Ga0209563_1185451 157
44 3300025256 Ga0209759_1017787 Ga0209759_10177872 157
45 3300025905 Ga0207685_10383303 Ga0207685_103833031 157
46 3300025918 Ga0207662_10238115 Ga0207662_102381153 157
47 3300025919 Ga0207657_10010555 Ga0207657_100105552 157
48 3300025932 Ga0207690_10239031 Ga0207690_102390312 157
49 3300025936 Ga0207670_10017948 Ga0207670_100179482 157
50 3300025936 Ga0207670_10049735 Ga0207670_100497353 157
51 3300025942 Ga0207689_10076977 Ga0207689_100769773 157
52 3300025949 Ga0207667_11801795 Ga0207667_118017951 157
53 3300025960 Ga0207651_10078846 Ga0207651_100788462 157
54 3300025981 Ga0207640_10479908 Ga0207640_104799082 157
55 3300031730 Ga0307516_10005021 Ga0307516_1000502115 157
56 3300036401 Ga0373937_0007536 Ga0373937_0007536_332_808 157
57 3300037471 Ga0395905_0097709 Ga0395905_0097709_1041_1517 157
58 3300046454 Ga0495592_0029340 Ga0495592_0029340_2341_2817 157
59 3300046511 Ga0495608_0012008 Ga0495608_0012008_3154_3630 157
60 3300046516 Ga0495628_0378923 Ga0495628_0378923_405_881 157
61 3300046529 Ga0495652_0060968 Ga0495652_0060968_227_703 157
62 3300046536 Ga0495587_0006676 Ga0495587_0006676_4439_4915 157
63 3300046543 Ga0495645_0009096 Ga0495645_0009096_3532_4008 157
64 3300046559 Ga0495667_0010737 Ga0495667_0010737_22_498 157
65 3300046663 Ga0495635_0008700 Ga0495635_0008700_3666_4142 157
66 3300046675 Ga0495657_0205195 Ga0495657_0205195_225_701 157
67 3300046678 Ga0495599_0020561 Ga0495599_0020561_39_515 157
68 3300046679 Ga0495623_0001427 Ga0495623_0001427_14012_14488 157
69 3300046683 Ga0495658_0799795 Ga0495658_0799795_60_536 157
70 3300046809 Ga0495600_0164934 Ga0495600_0164934_52_528 157
71 3300047323 Ga0495683_0089068 Ga0495683_0089068_957_1433 157
72 3300053077 Ga0495601_0014838 Ga0495601_0014838_3995_4471 157
73 3300053084 Ga0495595_0027030 Ga0495595_0027030_1867_2343 157
74 3300005327 Ga0070658_10026202 Ga0070658_100262024 158
75 3300005328 Ga0070676_10384412 Ga0070676_103844121 158
76 3300005353 Ga0070669_100133918 Ga0070669_1001339182 158
77 3300005354 Ga0070675_100387525 Ga0070675_1003875252 158
78 3300005355 Ga0070671_101464761 Ga0070671_1014647611 158
79 3300005356 Ga0070674_100177635 Ga0070674_1001776352 158
80 3300005366 Ga0070659_100427601 Ga0070659_1004276012 158
81 3300005366 Ga0070659_100982321 Ga0070659_1009823212 158
82 3300005441 Ga0070700_100723791 Ga0070700_1007237912 158
83 3300005456 Ga0070678_100056803 Ga0070678_1000568034 158
84 3300005563 Ga0068855_100315270 Ga0068855_1003152703 158
85 3300005842 Ga0068858_100942895 Ga0068858_1009428952 158
86 3300006358 Ga0068871_100583238 Ga0068871_1005832381 158
87 3300009093 Ga0105240_11841264 Ga0105240_118412641 158
88 3300009177 Ga0105248_10944192 Ga0105248_109441921 158
89 3300013307 Ga0157372_10579685 Ga0157372_105796852 158
90 3300013308 Ga0157375_10703577 Ga0157375_107035772 158
91 3300014745 Ga0157377_10262434 Ga0157377_102624341 158
92 3300014969 Ga0157376_10803070 Ga0157376_108030702 158
93 3300025302 Ga0207426_1018843 Ga0207426_10188432 158
94 3300025909 Ga0207705_10204565 Ga0207705_102045653 158
95 3300025913 Ga0207695_10185780 Ga0207695_101857802 158
96 3300025913 Ga0207695_10237467 Ga0207695_102374672 158
97 3300025932 Ga0207690_10594210 Ga0207690_105942101 158
98 3300025949 Ga0207667_10717123 Ga0207667_107171232 158
99 3300025960 Ga0207651_10498472 Ga0207651_104984722 158
100 3300026121 Ga0207683_10015001 Ga0207683_100150017 158
101 3300031238 Ga0265332_10080190 Ga0265332_100801902 158
102 3300031616 Ga0307508_10155788 Ga0307508_101557882 158
103 3300031731 Ga0307405_10201193 Ga0307405_102011932 158
104 3300031824 Ga0307413_10967530 Ga0307413_109675301 158
105 3300031903 Ga0307407_10133839 Ga0307407_101338392 158
106 3300031995 Ga0307409_101159482 Ga0307409_1011594821 158
107 3300032004 Ga0307414_10030619 Ga0307414_100306194 158
108 3300032004 Ga0307414_10466607 Ga0307414_104666072 158
109 3300032005 Ga0307411_10744018 Ga0307411_107440182 158
110 3300035691 Ga0373931_0054481 Ga0373931_0054481_220_708 158
111 3300037068 Ga0373925_0177124 Ga0373925_0177124_548_1033 158
112 3300037312 Ga0395899_0062194 Ga0395899_0062194_1652_2140 158
113 3300037418 Ga0395900_0032896 Ga0395900_0032896_2465_2953 158
114 3300037418 Ga0395900_0109532 Ga0395900_0109532_827_1315 158
115 3300037466 Ga0395898_0016340 Ga0395898_0016340_827_1315 158
116 3300037471 Ga0395905_0106577 Ga0395905_0106577_909_1397 158
117 3300038443 Ga0395901_0058614 Ga0395901_0058614_2092_2580 158
118 3300038443 Ga0395901_0077072 Ga0395901_0077072_1524_2012 158
119 3300039437 Ga0436365_1235555 Ga0436365_1235555_136_618 158
120 3300039438 Ga0436360_0161583 Ga0436360_0161583_240_731 158
121 3300048908 Ga0496105_0291942 Ga0496105_0291942_191_679 158
122 3300049571 Ga0501034_0001445 Ga0501034_0001445_2595_3074 158
123 3300049571 Ga0501034_0004106 Ga0501034_0004106_9480_9959 158
124 3300049584 Ga0501068_0049134 Ga0501068_0049134_950_1429 158
125 3300049586 Ga0501070_0294221 Ga0501070_0294221_182_661 158
126 3300049588 Ga0501072_1294604 Ga0501072_1294604_73_552 158
127 3300049823 Ga0501044_0317785 Ga0501044_0317785_177_656 158
128 3300053080 Ga0500635_0000137 Ga0500635_0000137_26873_27445 158
129 3300005546 Ga0070696_100002562 Ga0070696_1000025623 159
130 3300006048 Ga0075363_100792357 Ga0075363_1007923571 159
131 3300006353 Ga0075370_10014579 Ga0075370_100145793 159
132 3300009148 Ga0105243_10025609 Ga0105243_100256094 159
133 3300014497 Ga0182008_10537221 Ga0182008_105372211 159
134 3300025935 Ga0207709_10014432 Ga0207709_100144324 159
135 3300031507 Ga0307509_10113417 Ga0307509_101134176 159
136 3300044901 Ga0466960_0047027 Ga0466960_0047027_1482_1973 159
137 3300046691 Ga0495670_0335257 Ga0495670_0335257_183_677 159
138 3300003323 rootH1_10148678 rootH1_101486781 160
139 3300005293 Ga0065715_10149298 Ga0065715_101492981 160
140 3300005331 Ga0070670_100017740 Ga0070670_1000177407 160
141 3300005356 Ga0070674_101151149 Ga0070674_1011511491 160
142 3300005434 Ga0070709_10066727 Ga0070709_100667271 160
143 3300005439 Ga0070711_100022214 Ga0070711_1000222144 160
144 3300005545 Ga0070695_100304004 Ga0070695_1003040042 160
145 3300013104 Ga0157370_10131852 Ga0157370_101318523 160
146 3300013306 Ga0163162_10000021 Ga0163162_10000021152 160
147 3300014326 Ga0157380_10513337 Ga0157380_105133373 160
148 3300017792 Ga0163161_10566935 Ga0163161_105669352 160
149 3300025925 Ga0207650_10021880 Ga0207650_1002188010 160
150 3300025937 Ga0207669_11491490 Ga0207669_114914901 160
151 3300028786 Ga0307517_10100247 Ga0307517_101002474 160
152 3300031728 Ga0316578_10163380 Ga0316578_101633802 160
153 3300031824 Ga0307413_10390343 Ga0307413_103903432 160
154 3300041498 Ga0451841_0133723 Ga0451841_0133723_112_648 160

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04828

GFA

Glutathione-dependent formaldehyde-activating enzyme

59

151

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8ajq-assembly3.cif.gz_E crystal structure of pa2722 from pseudomonas aeruginosa pao1 0.8579 5 139
2hc5-assembly1.cif.gz_A solution nmr structure of protein yvyc from bacillus subtilis. northeast structural genomics consortium target sr482. 0.8024 60 91
8ajq-assembly3.cif.gz_E crystal structure of pa2722 from pseudomonas aeruginosa pao1 0.7915 5 139
2jjr-assembly1.cif.gz_A v232k, n236d-trichosanthin 0.781 60 88
1mom-assembly1.cif.gz_A crystal structure of momordin, a type i ribosome inactivating protein from the seeds of momordica charantia 0.7708 60 88
ID Description Score Start End Superfamily
2hc5A01 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;FlaG-like 0.8024 60 91 3.30.160.170
af_O14034_2_133_3.90.1590.10 Alpha Beta;Alpha-Beta Complex;glutathione-dependent formaldehyde- activating enzyme (gfa);glutathione-dependent formaldehyde- activating enzyme (gfa) 0.7804 5 133 3.90.1590.10
af_C7IYE5_70_121_3.30.160.60 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain;Classic Zinc Finger 0.7584 60 85 3.30.160.60
1ahbA01 Alpha Beta;3-Layer(aba) Sandwich;Ricin (A subunit); domain 1;Ricin (A subunit), domain 1 0.7451 60 87 3.40.420.10
3ku0B01 Alpha Beta;3-Layer(aba) Sandwich;Ricin (A subunit); domain 1;Ricin (A subunit), domain 1 0.7437 58 89 3.40.420.10
ID Description Score Start End GO Terms
AF-A0A6M4GWV9-F1-model_v4 CENP-V/GFA domain-containing protein 0.9706 4 157 GO:0016846
GO:0046872
AF-A0A848H3V4-F1-model_v4 GFA family protein 0.9698 5 155 GO:0016846
GO:0046872
AF-A0A1Y2QP21-F1-model_v4 Aldehyde-activating protein 0.9666 8 157 GO:0016846
GO:0046872
AF-A0A095AT73-F1-model_v4 Glutathione-dependent formaldehyde-activating, GFA 0.9655 8 157 GO:0016846
GO:0046872
AF-A0A0B5DY22-F1-model_v4 CENP-V/GFA domain-containing protein 0.9632 8 157 GO:0016846
GO:0046872

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pLDDT pTM Quality
88.29 0.85 High
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Predicted Structure (AlphaFold2)

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