F220506

General Info

Members Datasets Scaffolds Average Seq Length
154 108 308 671

Family's Representative Sequence

Representative Sequence 3300047323|Ga0495683_0005890|Ga0495683_0005890_1286_3406
Length 706
Sequence MCCTVAINKSGKNNLAGKILAMKRQHEDSPMNMEKMDHNNMHGASHPAMGMPGHDHHAMMIADFRKRFYVTLVLTVPVMLLSTMIQHWLHIDFQFNGSSWLLFLLATIVFLYGGWPFLSGWIDELKARNPGMMTLIGFAITVAYCYSAATVFGLKGMDFFWELTTLILIMLLGHWIEMKSVAGASKELELLVQLMPTDAHLINGEHIEEVRTDSLKPGDLILIKPGEKIAADGIIQDGESYLNESMLTGESTPVQKSKGQDVIAGSVNGNGSLRVKVTHSGADSYLSKVITLVNDAQRAKSNTQLLADKAARWLTIIALAAGIGTFIFWLVEGKDLAFAMERMVTVIVICCPHALGLAVPLVVAKSTSLSAQHGLLIKNRTAFESSRKITTIVFDKTGTLTVGKFEIARIVVVEPESENLKESENRMLALAAALEQNSEHPIATGILSEVKKRSLVIPEVKRFQAITGKGVEALVEGKRLKVVSPAYLKENKLALPGNFVQQGNETVVFVIIDEKLYGYFSLSDTLRPESADAIKTLHDNGIKSLLLTGDNQQVAESVSRQLKMDGYFAEVLPHQKLDKVKELQQSGEFVAMTGDGVNDAPALAQADIGIAVGSGSDIAAETAGIVLVNSNPKDIVSLILFGRATYRKMIQNLAWATGYNVVALPLAAGILYKQGILLSPAAGAVLMTVSTVVVAINASMLKVNKR

Samples

Sample ID Description Type Environment
1 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
33 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
36 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
39 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
40 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
53 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
54 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
55 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
56 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
80 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
81 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
82 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
83 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
87 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
88 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
89 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
90 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
91 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
92 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
93 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
98 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
99 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
100 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
101 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
102 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
103 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
104 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
105 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
106 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
107 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
108 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.1
Metatranscriptomes 0
Isolates 3.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.3
Nodule 0
Rhizoplane 0.65
Rhizosphere 89.61
Stem 0
Stem Tuber 0
Unclassified 3.9

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495683_0005890 3300047323 Bacteria 6734
2 JGI24740J21852_10000670 3300001979 Bacteria 14824
3 JGI24737J22298_10000105 3300001990 Bacteria 25254
4 JGI24735J21928_10000001 3300002067 Bacteria 650042
5 rootH2_10046934 3300003320 Bacteria 6402
6 rootH2_10080276 3300003320 Bacteria 2823
7 rootH2_10115254 3300003320 Bacteria 2518
8 rootL2_10145893 3300003322 Bacteria 8713
9 Ga0070683_100056160 3300005329 Bacteria 3656
10 Ga0068869_100005955 3300005334 Bacteria 7708
11 Ga0068869_100017589 3300005334 Bacteria 4849
12 Ga0070666_10003895 3300005335 Bacteria 9061
13 Ga0070682_100000938 3300005337 Bacteria 16996
14 Ga0070689_100085503 3300005340 Bacteria 2480
15 Ga0070691_10000988 3300005341 Bacteria 11623
16 Ga0070661_100016664 3300005344 Bacteria 5199
17 Ga0070688_100006004 3300005365 Bacteria 6441
18 Ga0070688_100018746 3300005365 Bacteria 4000
19 Ga0070659_100000253 3300005366 Bacteria 42218
20 Ga0070662_100030887 3300005457 Bacteria 3753
21 Ga0070679_100007911 3300005530 Bacteria 9974
22 Ga0070679_100047564 3300005530 Unclassified 4274
23 Ga0070684_100028785 3300005535 Bacteria 4701
24 Ga0068853_100028623 3300005539 Bacteria 4688
25 Ga0070686_100013375 3300005544 Bacteria 4697
26 Ga0070693_100005150 3300005547 Bacteria 6250
27 Ga0070665_100097601 3300005548 Bacteria 2943
28 Ga0068855_100007448 3300005563 Bacteria 13255
29 Ga0068855_100061913 3300005563 Bacteria 4370
30 Ga0070664_100019555 3300005564 Bacteria 5572
31 Ga0070664_100086087 3300005564 Bacteria 2715
32 Ga0068857_100003042 3300005577 Bacteria 13871
33 Ga0068857_100018223 3300005577 Bacteria 6158
34 Ga0068852_100000982 3300005616 Bacteria 18761
35 Ga0068859_100033604 3300005617 Bacteria 5152
36 Ga0068859_100050990 3300005617 Bacteria 4159
37 Ga0068859_100108122 3300005617 Bacteria 2842
38 Ga0068864_100011417 3300005618 Bacteria 7337
39 Ga0068861_100004016 3300005719 Bacteria 9850
40 Ga0068858_100072269 3300005842 Bacteria 3201
41 Ga0068860_100003149 3300005843 Bacteria 17054
42 Ga0068860_100003272 3300005843 Bacteria 16676
43 Ga0068860_100006041 3300005843 Bacteria 12187
44 Ga0075366_10000734 3300006195 Bacteria 15602
45 Ga0068871_100098193 3300006358 Bacteria 2450
46 Ga0097620_100033604 3300006931 Bacteria 5152
47 Ga0097620_100050990 3300006931 Bacteria 4159
48 Ga0097620_100108120 3300006931 Bacteria 2842
49 Ga0105240_10000023 3300009093 Bacteria 385028
50 Ga0105240_10000107 3300009093 Bacteria 171629
51 Ga0105240_10007520 3300009093 Bacteria 15806
52 Ga0105240_10010845 3300009093 Bacteria 12763
53 Ga0105240_10020428 3300009093 Bacteria 8834
54 Ga0111539_10007048 3300009094 Bacteria 14423
55 Ga0114129_10089731 3300009147 Bacteria 4261
56 Ga0105241_10003308 3300009174 Bacteria 11992
57 Ga0105237_10042709 3300009545 Bacteria 4571
58 Ga0105238_10001751 3300009551 Bacteria 21779
59 Ga0105239_10002171 3300010375 Bacteria 25214
60 Ga0105239_10016974 3300010375 Bacteria 8047
61 Ga0105239_10175350 3300010375 Bacteria 2398
62 Ga0157371_10001660 3300013102 Bacteria 22701
63 Ga0157371_10007847 3300013102 Bacteria 8567
64 Ga0157371_10019589 3300013102 Bacteria 4986
65 Ga0157371_10056180 3300013102 Bacteria 2792
66 Ga0157370_10005080 3300013104 Bacteria 14841
67 Ga0157370_10006498 3300013104 Bacteria 12878
68 Ga0157370_10016402 3300013104 Bacteria 7499
69 Ga0157369_10013373 3300013105 Bacteria 9283
70 Ga0157369_10061164 3300013105 Bacteria 4061
71 Ga0157374_10004321 3300013296 Bacteria 11953
72 Ga0157378_10003253 3300013297 Bacteria 14451
73 Ga0157378_10007260 3300013297 Bacteria 9675
74 Ga0163162_10007515 3300013306 Bacteria 10610
75 Ga0163162_10032557 3300013306 Bacteria 5179
76 Ga0157372_10000674 3300013307 Bacteria 37597
77 Ga0157372_10001799 3300013307 Bacteria 23283
78 Ga0157372_10012225 3300013307 Bacteria 9141
79 Ga0157372_10035259 3300013307 Bacteria 5507
80 Ga0157372_10151234 3300013307 Unclassified 2679
81 Ga0157375_10006180 3300013308 Bacteria 10437
82 Ga0163163_10004693 3300014325 Bacteria 11701
83 Ga0157380_10124232 3300014326 Bacteria 2191
84 Ga0157377_10009612 3300014745 Bacteria 4754
85 Ga0157379_10042498 3300014968 Bacteria 4058
86 Ga0157376_10073307 3300014969 Bacteria 2915
87 Ga0209026_1000709 3300025250 Bacteria 19750
88 Ga0209026_1005206 3300025250 Bacteria 3570
89 Ga0207710_10000519 3300025900 Bacteria 23628
90 Ga0207647_10006903 3300025904 Bacteria 8229
91 Ga0207647_10031423 3300025904 Bacteria 3417
92 Ga0207647_10032688 3300025904 Bacteria 3339
93 Ga0207707_10000892 3300025912 Bacteria 29175
94 Ga0207695_10000016 3300025913 Bacteria 771991
95 Ga0207695_10000199 3300025913 Bacteria 166179
96 Ga0207671_10002217 3300025914 Bacteria 21092
97 Ga0207660_10066177 3300025917 Unclassified 2614
98 Ga0207652_10058475 3300025921 Bacteria 3322
99 Ga0207694_10015403 3300025924 Bacteria 5766
100 Ga0207690_10004446 3300025932 Bacteria 8274
101 Ga0207706_10015628 3300025933 Bacteria 6859
102 Ga0207706_10045955 3300025933 Bacteria 3867
103 Ga0207689_10007017 3300025942 Bacteria 9904
104 Ga0207689_10014085 3300025942 Bacteria 6806
105 Ga0207679_10034425 3300025945 Unclassified 3573
106 Ga0207667_10001285 3300025949 Bacteria 31480
107 Ga0207640_10046810 3300025981 Bacteria 2786
108 Ga0207658_10019401 3300025986 Bacteria 4703
109 Ga0207703_10093647 3300026035 Unclassified 2531
110 Ga0207639_10086511 3300026041 Bacteria 2496
111 Ga0207678_10039455 3300026067 Bacteria 4098
112 Ga0207676_10009703 3300026095 Bacteria 6844
113 Ga0207676_10037807 3300026095 Bacteria 3681
114 Ga0207674_10001038 3300026116 Bacteria 36091
115 Ga0207674_10006436 3300026116 Bacteria 13808
116 Ga0207674_10133654 3300026116 Bacteria 2443
117 Ga0207675_100001112 3300026118 Bacteria 26617
118 Ga0268266_10028952 3300028379 Bacteria 4707
119 Ga0268264_10002250 3300028381 Bacteria 17084
120 Ga0268264_10002458 3300028381 Bacteria 16281
121 Ga0268264_10039717 3300028381 Bacteria 3888
122 Ga0307517_10000255 3300028786 Bacteria 91028
123 Ga0307517_10014954 3300028786 Bacteria 10358
124 Ga0307515_10000009 3300028794 Bacteria 653206
125 Ga0307515_10014534 3300028794 Bacteria 14577
126 Ga0265327_10010191 3300031251 Bacteria 6641
127 Ga0307510_10000536 3300033180 Bacteria 37853
128 Ga0395900_0152820 3300037418 Bacteria 2358
129 Ga0395901_0009958 3300038443 Bacteria 9634
130 Ga0453684_0218751 3300044712 Bacteria 2208
131 Ga0466959_0016665 3300045049 Bacteria 5373
132 Ga0495638_0081046 3300046460 Bacteria 1971
133 Ga0495606_0026888 3300046507 Bacteria 4089
134 Ga0495610_0000167 3300046512 Bacteria 73458
135 Ga0495668_0024453 3300046616 Bacteria 3435
136 Ga0495661_0010580 3300046665 Bacteria 6291
137 Ga0495684_0054946 3300047471 Bacteria 3037
138 Ga0501034_0002188 3300049571 Bacteria 24185
139 Ga0501034_0009059 3300049571 Bacteria 10452
140 Ga0501036_0019149 3300049572 Bacteria 5743
141 Ga0501039_0003930 3300049575 Bacteria 11172
142 Ga0501047_0120122 3300049581 Unclassified 2510
143 Ga0501070_0030796 3300049586 Bacteria 4494
144 Ga0501073_0000260 3300049589 Bacteria 34932
145 Ga0501074_0000997 3300049590 Bacteria 18417
146 Ga0501080_0005024 3300049742 Bacteria 11784
147 nmdc:mga05p37_71751_c1 3300050507 Bacteria 4261
148 Ga0500583_0004521 3300053092 Bacteria 4547
149 2599477466 2599185184 Bacteria 6430550
150 2852624231 2852623160 Bacteria 4376875
151 2884935356 2884933994 Bacteria 4535041
152 2928079378 2928078545 Bacteria 6534839
153 2928148140 2928147474 Bacteria 6512076
154 2932084031 2932082852 Bacteria 6563563
155 Ga0495683_0005890
156 JGI24740J21852_10000670
157 JGI24737J22298_10000105
158 JGI24735J21928_10000001
159 rootH2_10046934
160 rootH2_10080276
161 rootH2_10115254
162 rootL2_10145893
163 Ga0070683_100056160
164 Ga0068869_100005955
165 Ga0068869_100017589
166 Ga0070666_10003895
167 Ga0070682_100000938
168 Ga0070689_100085503
169 Ga0070691_10000988
170 Ga0070661_100016664
171 Ga0070688_100006004
172 Ga0070688_100018746
173 Ga0070659_100000253
174 Ga0070662_100030887
175 Ga0070679_100007911
176 Ga0070679_100047564
177 Ga0070684_100028785
178 Ga0068853_100028623
179 Ga0070686_100013375
180 Ga0070693_100005150
181 Ga0070665_100097601
182 Ga0068855_100007448
183 Ga0068855_100061913
184 Ga0070664_100019555
185 Ga0070664_100086087
186 Ga0068857_100003042
187 Ga0068857_100018223
188 Ga0068852_100000982
189 Ga0068859_100033604
190 Ga0068859_100050990
191 Ga0068859_100108122
192 Ga0068864_100011417
193 Ga0068861_100004016
194 Ga0068858_100072269
195 Ga0068860_100003149
196 Ga0068860_100003272
197 Ga0068860_100006041
198 Ga0075366_10000734
199 Ga0068871_100098193
200 Ga0097620_100033604
201 Ga0097620_100050990
202 Ga0097620_100108120
203 Ga0105240_10000023
204 Ga0105240_10000107
205 Ga0105240_10007520
206 Ga0105240_10010845
207 Ga0105240_10020428
208 Ga0111539_10007048
209 Ga0114129_10089731
210 Ga0105241_10003308
211 Ga0105237_10042709
212 Ga0105238_10001751
213 Ga0105239_10002171
214 Ga0105239_10016974
215 Ga0105239_10175350
216 Ga0157371_10001660
217 Ga0157371_10007847
218 Ga0157371_10019589
219 Ga0157371_10056180
220 Ga0157370_10005080
221 Ga0157370_10006498
222 Ga0157370_10016402
223 Ga0157369_10013373
224 Ga0157369_10061164
225 Ga0157374_10004321
226 Ga0157378_10003253
227 Ga0157378_10007260
228 Ga0163162_10007515
229 Ga0163162_10032557
230 Ga0157372_10000674
231 Ga0157372_10001799
232 Ga0157372_10012225
233 Ga0157372_10035259
234 Ga0157372_10151234
235 Ga0157375_10006180
236 Ga0163163_10004693
237 Ga0157380_10124232
238 Ga0157377_10009612
239 Ga0157379_10042498
240 Ga0157376_10073307
241 Ga0209026_1000709
242 Ga0209026_1005206
243 Ga0207710_10000519
244 Ga0207647_10006903
245 Ga0207647_10031423
246 Ga0207647_10032688
247 Ga0207707_10000892
248 Ga0207695_10000016
249 Ga0207695_10000199
250 Ga0207671_10002217
251 Ga0207660_10066177
252 Ga0207652_10058475
253 Ga0207694_10015403
254 Ga0207690_10004446
255 Ga0207706_10015628
256 Ga0207706_10045955
257 Ga0207689_10007017
258 Ga0207689_10014085
259 Ga0207679_10034425
260 Ga0207667_10001285
261 Ga0207640_10046810
262 Ga0207658_10019401
263 Ga0207703_10093647
264 Ga0207639_10086511
265 Ga0207678_10039455
266 Ga0207676_10009703
267 Ga0207676_10037807
268 Ga0207674_10001038
269 Ga0207674_10006436
270 Ga0207674_10133654
271 Ga0207675_100001112
272 Ga0268266_10028952
273 Ga0268264_10002250
274 Ga0268264_10002458
275 Ga0268264_10039717
276 Ga0307517_10000255
277 Ga0307517_10014954
278 Ga0307515_10000009
279 Ga0307515_10014534
280 Ga0265327_10010191
281 Ga0307510_10000536
282 Ga0395900_0152820
283 Ga0395901_0009958
284 Ga0453684_0218751
285 Ga0466959_0016665
286 Ga0495638_0081046
287 Ga0495606_0026888
288 Ga0495610_0000167
289 Ga0495668_0024453
290 Ga0495661_0010580
291 Ga0495684_0054946
292 Ga0501034_0002188
293 Ga0501034_0009059
294 Ga0501036_0019149
295 Ga0501039_0003930
296 Ga0501047_0120122
297 Ga0501070_0030796
298 Ga0501073_0000260
299 Ga0501074_0000997
300 Ga0501080_0005024
301 nmdc:mga05p37_71751_c1
302 Ga0500583_0004521
303 2599477466
304 2852624231
305 2884935356
306 2928079378
307 2928148140
308 2932084031

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00122

E1-E2_ATPase

E1-E2 ATPase

193

373

0.98

PF00702

Hydrolase

haloacid dehalogenase-like hydrolase

389

607

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2voy-assembly1.cif.gz_I cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus 0.9081 507 619
2voy-assembly1.cif.gz_F cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus 0.8887 173 281
2voy-assembly1.cif.gz_F cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus 0.8528 173 281
2yj4-assembly1.cif.gz_A conformational changes in the catalytic domain of the cpx-atpase copb- b upon nucleotide binding 0.8419 360 619
2yj5-assembly1.cif.gz_A conformational changes in the catalytic domain of the cpx-atpase copb- b upon nucleotide binding 0.8408 360 619
ID Description Score Start End Superfamily
af_O59666_301_417_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9433 170 279 2.70.150.10
af_P9WPU1_234_346_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9338 173 282 2.70.150.10
af_P9WPT3_132_249_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9319 170 281 2.70.150.10
af_Q557B5_1074_1224_3.40.50.1000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HAD superfamily/HAD-like 0.9309 503 632 3.40.50.1000
af_P37617_212_315_2.70.150.10 Mainly Beta;Distorted Sandwich;Calcium-transporting ATPase, cytoplasmic transduction domain A;Calcium-transporting ATPase, cytoplasmic transduction domain A 0.9297 158 260 2.70.150.10
ID Description Score Start End GO Terms
AF-V5IE67-F1-model_v4 Putative atpase cu++ transporting alpha polypeptide 0.9386 503 636 GO:0005507
GO:0005524
GO:0005802
GO:0005886
GO:0006878
GO:0015677
GO:0016887
GO:0043682
GO:0060003
AF-V5IE67-F1-model_v4 Putative atpase cu++ transporting alpha polypeptide 0.9254 503 636 GO:0005507
GO:0005524
GO:0005802
GO:0005886
GO:0006878
GO:0015677
GO:0016887
GO:0043682
GO:0060003
AF-A0A3D1LC62-F1-model_v4 Heavy metal translocating P-type ATPase 0.9226 181 262 GO:0005507
GO:0016020
GO:0043682
GO:0055070
AF-M1EE46-F1-model_v4 ATPase, Cu++ transporting, beta polypeptide 0.9196 228 673 GO:0005507
GO:0005524
GO:0005802
GO:0005886
GO:0006878
GO:0015677
GO:0016887
GO:0043682
GO:0060003
AF-A0A4U9DE26-F1-model_v4 P-type Cu(+) transporter (EC 7.2.2.8) 0.9131 489 631 GO:0005507
GO:0005524
GO:0005886
GO:0016887
GO:0043682
GO:0055070

Map