F218955

General Info

Members Datasets Scaffolds Average Seq Length
154 97 154 525

Family's Representative Sequence

Representative Sequence 3300005436|Ga0070713_100004287|Ga0070713_1000042871
Length 573
Sequence MRGSDQSLSNFQIGAQSPEAESREPEARSEVRRPPFVTIQAMTSRLGLKPGNLQLILCVIAGLLAFVVQSGELGTADTMHRLQTTHWLWTSQPQVFPNEYPEFGLHGTKGRIFSWYGIGQSLLMLPADLVGTWVAHWRVFSAYDDDPAVRSIFVSYTTNILVSVLTAMIVFRLLQQLRFSAKESALGVLSLMFCTTHLHYTQNMQENNYIMLLTLAGFSFQYEWLRKGSQRALLLGSAALGLNLLTRVTTALDLMAGGVLLLVVLWFEQVRGRALWTRVWAYCRVAVPVYAVFALTERLYSYYRFGSLTQTYIPIFARESRLQDPSLPANFPWSTPFHEGVLGALFKPEKSIFLFDPLLVVALVLLALLWKGLWTEVRAYAIASLLLLLGYICFYARYTYWAGDFAWGDRYVSTAVEMVAMIAAPLLLRYRATLRPWVWRGSIALFAISFLIQVASLAFWLPLEIYQMETLGHPTFVIALRFKNIAAFALGKMDAWGLTNNAMTEDPWDYVHITTWNFFPFLLRRVGSAPAWVVRTAFAVWAAGLAAWLGALARLRTALNRELRTESPASISQ

Samples

Sample ID Description Type Environment
1 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
2 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
18 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
19 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
22 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
23 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
24 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
28 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
29 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
30 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
33 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300022730 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU2 Metagenome Rhizosphere
36 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
37 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
54 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
56 3300030760 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
57 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
59 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
60 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
61 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
62 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
63 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
64 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
65 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
66 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
67 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
68 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
69 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
70 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
71 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
72 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
73 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
74 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
75 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
76 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
77 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
78 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
79 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
80 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
81 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
82 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
83 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
84 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
85 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
86 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
87 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
88 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
89 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
90 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
91 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
92 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
93 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
94 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
95 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
96 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
97 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.05
Metatranscriptomes 1.95
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.95
Rhizosphere 96.1
Stem 0
Stem Tuber 0
Unclassified 1.95

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068868_100017578 3300005338 Bacteria 5331
2 Ga0070709_10065613 3300005434 Bacteria 2325
3 Ga0070714_100000188 3300005435 Bacteria 49788
4 Ga0070713_100002104 3300005436 Bacteria 12872
5 Ga0070713_100002849 3300005436 Bacteria 11308
6 Ga0070713_100004287 3300005436 Bacteria 9551
7 Ga0070713_100029215 3300005436 Bacteria 4363
8 Ga0070713_100038614 3300005436 Bacteria 3870
9 Ga0070710_10008507 3300005437 Bacteria 4996
10 Ga0070711_100009491 3300005439 Bacteria 5999
11 Ga0070708_100001475 3300005445 Bacteria 17947
12 Ga0070708_100015306 3300005445 Bacteria 6331
13 Ga0070708_100042753 3300005445 Unclassified 3980
14 Ga0070708_100092834 3300005445 Bacteria 2750
15 Ga0070706_100006372 3300005467 Bacteria 11146
16 Ga0070706_100020977 3300005467 Bacteria 6015
17 Ga0070706_100072330 3300005467 Unclassified 3190
18 Ga0070707_100002464 3300005468 Bacteria 17634
19 Ga0070707_100005248 3300005468 Bacteria 12123
20 Ga0070707_100009444 3300005468 Bacteria 9056
21 Ga0070707_100026979 3300005468 Bacteria 5461
22 Ga0070699_100000433 3300005518 Bacteria 40091
23 Ga0070699_100044441 3300005518 Unclassified 3846
24 Ga0070697_100001127 3300005536 Bacteria 20213
25 Ga0070697_100085655 3300005536 Bacteria 2600
26 Ga0068856_100021099 3300005614 Bacteria 6330
27 Ga0068863_100047123 3300005841 Bacteria 4090
28 Ga0068858_100000231 3300005842 Bacteria 60174
29 Ga0068860_100008540 3300005843 Bacteria 10206
30 Ga0070717_10007610 3300006028 Bacteria 8049
31 Ga0070717_10013543 3300006028 Bacteria 6254
32 Ga0070717_10019107 3300006028 Bacteria 5367
33 Ga0070717_10044490 3300006028 Bacteria 3626
34 Ga0070717_10099001 3300006028 Unclassified 2473
35 Ga0070715_10006777 3300006163 Bacteria 3907
36 Ga0070716_100000081 3300006173 Bacteria 37778
37 Ga0070716_100003080 3300006173 Bacteria 7780
38 Ga0070716_100004743 3300006173 Bacteria 6523
39 Ga0070712_100001411 3300006175 Bacteria 14601
40 Ga0070712_100001438 3300006175 Bacteria 14525
41 Ga0070712_100003755 3300006175 Bacteria 9353
42 Ga0097621_100039552 3300006237 Unclassified 3788
43 Ga0075433_10000892 3300006852 Bacteria 21038
44 Ga0075434_100043531 3300006871 Unclassified 4453
45 Ga0075436_100014478 3300006914 Bacteria 5404
46 Ga0075435_100000504 3300007076 Bacteria 23807
47 Ga0105240_10042226 3300009093 Bacteria 5812
48 Ga0105239_10004107 3300010375 Bacteria 17507
49 Ga0157369_10073185 3300013105 Bacteria 3677
50 Ga0157374_10008126 3300013296 Bacteria 8967
51 Ga0157374_10112303 3300013296 Unclassified 2622
52 Ga0157374_10114320 3300013296 Bacteria 2598
53 Ga0157378_10035410 3300013297 Bacteria 4415
54 Ga0163162_10015270 3300013306 Bacteria 7502
55 Ga0163162_10125001 3300013306 Bacteria 2678
56 Ga0157372_10004139 3300013307 Bacteria 15532
57 Ga0157372_10031694 3300013307 Bacteria 5789
58 Ga0157372_10039328 3300013307 Bacteria 5219
59 Ga0163163_10009426 3300014325 Bacteria 8718
60 Ga0157377_10026386 3300014745 Bacteria 3108
61 Ga0157376_10016622 3300014969 Bacteria 5592
62 Ga0157376_10027729 3300014969 Unclassified 4493
63 Ga0224570_101320 3300022730 Unclassified 1893
64 Ga0228598_1001212 3300024227 Bacteria 5691
65 Ga0228598_1002337 3300024227 Bacteria 4146
66 Ga0207692_10072139 3300025898 Unclassified 1823
67 Ga0207685_10000352 3300025905 Bacteria 7487
68 Ga0207684_10000414 3300025910 Bacteria 57184
69 Ga0207684_10047983 3300025910 Bacteria 3622
70 Ga0207707_10065800 3300025912 Bacteria 3156
71 Ga0207695_10099865 3300025913 Bacteria 2899
72 Ga0207693_10000852 3300025915 Bacteria 27247
73 Ga0207693_10003240 3300025915 Bacteria 13963
74 Ga0207693_10012442 3300025915 Bacteria 6875
75 Ga0207693_10020649 3300025915 Bacteria 5237
76 Ga0207663_10005667 3300025916 Bacteria 6314
77 Ga0207646_10000020 3300025922 Bacteria 272909
78 Ga0207646_10001187 3300025922 Bacteria 32813
79 Ga0207646_10042861 3300025922 Bacteria 4066
80 Ga0207646_10043008 3300025922 Bacteria 4058
81 Ga0207700_10000942 3300025928 Bacteria 16734
82 Ga0207700_10001224 3300025928 Bacteria 14674
83 Ga0207700_10018009 3300025928 Bacteria 4733
84 Ga0207700_10041637 3300025928 Bacteria 3362
85 Ga0207664_10000370 3300025929 Bacteria 32851
86 Ga0207664_10016190 3300025929 Bacteria 5432
87 Ga0207704_10067233 3300025938 Bacteria 2253
88 Ga0207665_10000160 3300025939 Bacteria 45510
89 Ga0207665_10004122 3300025939 Bacteria 9697
90 Ga0207665_10005167 3300025939 Bacteria 8717
91 Ga0207677_10047221 3300026023 Bacteria 2890
92 Ga0207703_10002784 3300026035 Bacteria 14952
93 Ga0207639_10012045 3300026041 Bacteria 6017
94 Ga0207675_100052538 3300026118 Bacteria 3802
95 Ga0265356_1000624 3300028017 Bacteria 6192
96 Ga0268266_10125686 3300028379 Bacteria 2288
97 Ga0265338_10005332 3300028800 Bacteria 16822
98 Ga0265338_10005903 3300028800 Bacteria 15781
99 Ga0265338_10037309 3300028800 Bacteria 4628
100 Ga0265338_10079140 3300028800 Bacteria 2767
101 Ga0265762_1001933 3300030760 Unclassified 3760
102 Ga0265760_10000122 3300031090 Bacteria 19848
103 Ga0265760_10013267 3300031090 Bacteria 2359
104 Ga0265330_10008348 3300031235 Bacteria 4987
105 Ga0265325_10003222 3300031241 Bacteria 10740
106 Ga0265325_10008371 3300031241 Bacteria 6107
107 Ga0265339_10004230 3300031249 Bacteria 9838
108 Ga0265339_10031732 3300031249 Bacteria 2984
109 Ga0265314_10005889 3300031711 Bacteria 10967
110 Ga0373926_0002670 3300035083 Bacteria 5680
111 Ga0373934_0013181 3300035086 Bacteria 3123
112 Ga0373944_0016804 3300035089 Bacteria 2069
113 Ga0373936_0004066 3300035113 Bacteria 5513
114 Ga0373953_0003748 3300035117 Bacteria 4777
115 Ga0373943_0001850 3300035170 Bacteria 9562
116 Ga0373946_0001420 3300035171 Bacteria 8314
117 Ga0373955_0028313 3300035172 Bacteria 2903
118 Ga0373924_0020651 3300035410 Bacteria 2562
119 Ga0373935_0009071 3300035692 Bacteria 5952
120 Ga0373927_0006257 3300035695 Bacteria 8126
121 Ga0373933_0001961 3300035724 Bacteria 11873
122 Ga0373933_0005462 3300035724 Bacteria 6922
123 Ga0373933_0033267 3300035724 Bacteria 2997
124 Ga0373947_0000098 3300035725 Bacteria 44133
125 Ga0373947_0020528 3300035725 Bacteria 3815
126 Ga0373937_0000170 3300036401 Bacteria 63587
127 Ga0373925_0002990 3300037068 Bacteria 13316
128 Ga0373925_0013679 3300037068 Bacteria 5876
129 Ga0373925_0043680 3300037068 Archaea 3327
130 Ga0436361_0004293 3300039447 Bacteria 26289
131 Ga0436363_1051785 3300039450 Bacteria 1938
132 Ga0453683_0007346 3300044673 Bacteria 7486
133 Ga0453684_0019984 3300044712 Bacteria 10151
134 Ga0451576_0018752 3300045051 Bacteria 7567
135 Ga0495651_0002008 3300046462 Bacteria 15709
136 Ga0495580_0000007 3300046472 Bacteria 103420
137 Ga0495580_0001476 3300046472 Bacteria 20632
138 Ga0495580_0011025 3300046472 Bacteria 7005
139 Ga0495582_0022368 3300046473 Bacteria 3460
140 Ga0495594_0019868 3300046499 Bacteria 3573
141 Ga0495630_0121628 3300046517 Bacteria 1980
142 Ga0495587_0000292 3300046536 Bacteria 35533
143 Ga0495674_0015441 3300047319 Bacteria 7136
144 Ga0495675_0013513 3300047444 Bacteria 5155
145 Ga0495602_0000456 3300048088 Bacteria 38089
146 Ga0496112_0003953 3300048915 Bacteria 12423
147 Ga0496115_0001586 3300048918 Bacteria 16295
148 Ga0496115_0023618 3300048918 Bacteria 4773
149 Ga0496126_0002726 3300048929 Bacteria 23341
150 Ga0496126_0018209 3300048929 Bacteria 6970
151 nmdc:mga0n895_12321_c1 3300050512 Bacteria 7667
152 nmdc:mga0rr50_288_c1 3300050513 Bacteria 27287
153 nmdc:mga08x19_2817_c1 3300050514 Bacteria 10488
154 nmdc:mga0a205_25579_c1 3300050515 Bacteria 5624

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006852 Ga0075433_10000892 Ga0075433_100008929 492
2 3300006871 Ga0075434_100043531 Ga0075434_1000435315 492
3 3300006914 Ga0075436_100014478 Ga0075436_1000144784 492
4 3300007076 Ga0075435_100000504 Ga0075435_10000050427 492
5 3300050512 nmdc:mga0n895_12321_c1 nmdc:mga0n895_12321_c1_115_1683 492
6 3300050513 nmdc:mga0rr50_288_c1 nmdc:mga0rr50_288_c1_23452_25020 492
7 3300050514 nmdc:mga08x19_2817_c1 nmdc:mga08x19_2817_c1_6618_8186 492
8 3300050515 nmdc:mga0a205_25579_c1 nmdc:mga0a205_25579_c1_3680_5248 492
9 3300039447 Ga0436361_0004293 Ga0436361_0004293_1557_3167 494
10 3300046472 Ga0495580_0001476 Ga0495580_0001476_6953_8572 495
11 3300013296 Ga0157374_10114320 Ga0157374_101143202 499
12 3300035692 Ga0373935_0009071 Ga0373935_0009071_4424_5932 501
13 3300039450 Ga0436363_1051785 Ga0436363_1051785_24_1544 504
14 3300024227 Ga0228598_1002337 Ga0228598_10023372 506
15 3300026041 Ga0207639_10012045 Ga0207639_100120457 506
16 3300005436 Ga0070713_100002104 Ga0070713_1000021049 509
17 3300006175 Ga0070712_100001411 Ga0070712_1000014118 509
18 3300025915 Ga0207693_10012442 Ga0207693_100124421 509
19 3300025928 Ga0207700_10001224 Ga0207700_100012246 509
20 3300025939 Ga0207665_10005167 Ga0207665_100051675 509
21 3300048929 Ga0496126_0002726 Ga0496126_0002726_18103_19683 509
22 3300005445 Ga0070708_100092834 Ga0070708_1000928341 514
23 3300028379 Ga0268266_10125686 Ga0268266_101256861 514
24 3300028800 Ga0265338_10005903 Ga0265338_1000590311 514
25 3300031241 Ga0265325_10003222 Ga0265325_100032221 514
26 3300006173 Ga0070716_100000081 Ga0070716_10000008123 515
27 3300025939 Ga0207665_10000160 Ga0207665_1000016025 515
28 3300013105 Ga0157369_10073185 Ga0157369_100731854 516
29 3300048918 Ga0496115_0023618 Ga0496115_0023618_3084_4673 516
30 3300005436 Ga0070713_100038614 Ga0070713_1000386143 518
31 3300025928 Ga0207700_10018009 Ga0207700_100180093 518
32 3300044673 Ga0453683_0007346 Ga0453683_0007346_2144_3760 518
33 3300044712 Ga0453684_0019984 Ga0453684_0019984_4825_6441 518
34 3300045051 Ga0451576_0018752 Ga0451576_0018752_1992_3608 518
35 3300006028 Ga0070717_10099001 Ga0070717_100990012 519
36 3300022730 Ga0224570_101320 Ga0224570_1013201 519
37 3300024227 Ga0228598_1001212 Ga0228598_10012122 519
38 3300028017 Ga0265356_1000624 Ga0265356_10006243 519
39 3300031090 Ga0265760_10000122 Ga0265760_100001226 519
40 3300006028 Ga0070717_10044490 Ga0070717_100444904 520
41 3300009093 Ga0105240_10042226 Ga0105240_100422265 520
42 3300013307 Ga0157372_10004139 Ga0157372_100041399 520
43 3300025912 Ga0207707_10065800 Ga0207707_100658002 520
44 3300025913 Ga0207695_10099865 Ga0207695_100998652 520
45 3300025929 Ga0207664_10016190 Ga0207664_100161903 520
46 3300035724 Ga0373933_0005462 Ga0373933_0005462_3592_5175 520
47 3300005434 Ga0070709_10065613 Ga0070709_100656132 521
48 3300005467 Ga0070706_100072330 Ga0070706_1000723302 521
49 3300006173 Ga0070716_100004743 Ga0070716_1000047432 521
50 3300028800 Ga0265338_10037309 Ga0265338_100373095 521
51 3300031235 Ga0265330_10008348 Ga0265330_100083482 521
52 3300031249 Ga0265339_10004230 Ga0265339_100042302 521
53 3300031711 Ga0265314_10005889 Ga0265314_100058895 521
54 3300005435 Ga0070714_100000188 Ga0070714_10000018853 522
55 3300005439 Ga0070711_100009491 Ga0070711_1000094913 522
56 3300005536 Ga0070697_100085655 Ga0070697_1000856551 522
57 3300006237 Ga0097621_100039552 Ga0097621_1000395523 522
58 3300014969 Ga0157376_10027729 Ga0157376_100277291 522
59 3300025916 Ga0207663_10005667 Ga0207663_100056673 522
60 3300025929 Ga0207664_10000370 Ga0207664_100003705 522
61 3300031090 Ga0265760_10013267 Ga0265760_100132672 522
62 3300035083 Ga0373926_0002670 Ga0373926_0002670_1195_2766 522
63 3300035086 Ga0373934_0013181 Ga0373934_0013181_754_2325 522
64 3300035089 Ga0373944_0016804 Ga0373944_0016804_335_1906 522
65 3300035117 Ga0373953_0003748 Ga0373953_0003748_1448_3019 522
66 3300035170 Ga0373943_0001850 Ga0373943_0001850_2467_4038 522
67 3300035171 Ga0373946_0001420 Ga0373946_0001420_5945_7516 522
68 3300035172 Ga0373955_0028313 Ga0373955_0028313_1096_2667 522
69 3300035410 Ga0373924_0020651 Ga0373924_0020651_892_2463 522
70 3300035695 Ga0373927_0006257 Ga0373927_0006257_3036_4607 522
71 3300035724 Ga0373933_0033267 Ga0373933_0033267_56_1627 522
72 3300035725 Ga0373947_0000098 Ga0373947_0000098_29897_31468 522
73 3300037068 Ga0373925_0002990 Ga0373925_0002990_6348_7919 522
74 3300047319 Ga0495674_0015441 Ga0495674_0015441_4316_5887 522
75 3300005436 Ga0070713_100029215 Ga0070713_1000292152 523
76 3300025915 Ga0207693_10020649 Ga0207693_100206494 523
77 3300025928 Ga0207700_10041637 Ga0207700_100416372 523
78 3300005614 Ga0068856_100021099 Ga0068856_1000210992 524
79 3300006028 Ga0070717_10007610 Ga0070717_100076102 524
80 3300006028 Ga0070717_10019107 Ga0070717_100191074 524
81 3300013296 Ga0157374_10112303 Ga0157374_101123031 524
82 3300013307 Ga0157372_10031694 Ga0157372_100316942 524
83 3300025939 Ga0207665_10004122 Ga0207665_100041224 524
84 3300035113 Ga0373936_0004066 Ga0373936_0004066_1597_3174 524
85 3300035725 Ga0373947_0020528 Ga0373947_0020528_2040_3617 524
86 3300037068 Ga0373925_0013679 Ga0373925_0013679_4121_5698 524
87 3300037068 Ga0373925_0043680 Ga0373925_0043680_1498_3075 524
88 3300046472 Ga0495580_0000007 Ga0495580_0000007_94049_95626 524
89 3300046473 Ga0495582_0022368 Ga0495582_0022368_656_2233 524
90 3300046517 Ga0495630_0121628 Ga0495630_0121628_220_1797 524
91 3300005436 Ga0070713_100002849 Ga0070713_1000028497 525
92 3300005841 Ga0068863_100047123 Ga0068863_1000471233 525
93 3300006028 Ga0070717_10013543 Ga0070717_100135433 525
94 3300006163 Ga0070715_10006777 Ga0070715_100067772 525
95 3300006173 Ga0070716_100003080 Ga0070716_1000030802 525
96 3300006175 Ga0070712_100001438 Ga0070712_1000014385 525
97 3300013306 Ga0163162_10125001 Ga0163162_101250012 525
98 3300025905 Ga0207685_10000352 Ga0207685_100003522 525
99 3300025915 Ga0207693_10000852 Ga0207693_100008527 525
100 3300025928 Ga0207700_10000942 Ga0207700_100009428 525
101 3300028800 Ga0265338_10005332 Ga0265338_1000533212 525
102 3300048918 Ga0496115_0001586 Ga0496115_0001586_10416_11996 525
103 3300005468 Ga0070707_100009444 Ga0070707_1000094443 526
104 3300005518 Ga0070699_100044441 Ga0070699_1000444414 526
105 3300014325 Ga0163163_10009426 Ga0163163_100094264 526
106 3300014969 Ga0157376_10016622 Ga0157376_100166223 526
107 3300025922 Ga0207646_10043008 Ga0207646_100430082 526
108 3300028800 Ga0265338_10079140 Ga0265338_100791401 526
109 3300005467 Ga0070706_100006372 Ga0070706_1000063728 527
110 3300005468 Ga0070707_100002464 Ga0070707_1000024649 527
111 3300025922 Ga0207646_10000020 Ga0207646_1000002054 527
112 3300048929 Ga0496126_0018209 Ga0496126_0018209_862_2520 527
113 3300005445 Ga0070708_100001475 Ga0070708_10000147519 528
114 3300005445 Ga0070708_100042753 Ga0070708_1000427533 528
115 3300005467 Ga0070706_100020977 Ga0070706_1000209774 528
116 3300005468 Ga0070707_100005248 Ga0070707_1000052483 528
117 3300005518 Ga0070699_100000433 Ga0070699_10000043314 528
118 3300005536 Ga0070697_100001127 Ga0070697_1000011273 528
119 3300025910 Ga0207684_10000414 Ga0207684_1000041437 528
120 3300025922 Ga0207646_10001187 Ga0207646_100011873 528
121 3300030760 Ga0265762_1001933 Ga0265762_10019334 528
122 3300031241 Ga0265325_10008371 Ga0265325_100083711 528
123 3300035724 Ga0373933_0001961 Ga0373933_0001961_1310_2899 528
124 3300036401 Ga0373937_0000170 Ga0373937_0000170_54707_56296 528
125 3300046462 Ga0495651_0002008 Ga0495651_0002008_3309_4898 528
126 3300046536 Ga0495587_0000292 Ga0495587_0000292_13306_14895 528
127 3300047444 Ga0495675_0013513 Ga0495675_0013513_2138_3727 528
128 3300048088 Ga0495602_0000456 Ga0495602_0000456_7265_8854 528
129 3300005437 Ga0070710_10008507 Ga0070710_100085076 529
130 3300031249 Ga0265339_10031732 Ga0265339_100317322 529
131 3300005445 Ga0070708_100015306 Ga0070708_1000153062 530
132 3300005468 Ga0070707_100026979 Ga0070707_1000269794 530
133 3300013307 Ga0157372_10039328 Ga0157372_100393282 530
134 3300025910 Ga0207684_10047983 Ga0207684_100479832 530
135 3300025922 Ga0207646_10042861 Ga0207646_100428612 530
136 3300006175 Ga0070712_100003755 Ga0070712_1000037554 531
137 3300025898 Ga0207692_10072139 Ga0207692_100721391 531
138 3300025915 Ga0207693_10003240 Ga0207693_100032408 531
139 3300046472 Ga0495580_0011025 Ga0495580_0011025_4348_5973 531
140 3300046499 Ga0495594_0019868 Ga0495594_0019868_541_2166 531
141 3300005436 Ga0070713_100004287 Ga0070713_1000042871 533
142 3300005338 Ga0068868_100017578 Ga0068868_1000175782 534
143 3300005842 Ga0068858_100000231 Ga0068858_10000023156 534
144 3300005843 Ga0068860_100008540 Ga0068860_1000085402 534
145 3300010375 Ga0105239_10004107 Ga0105239_100041073 534
146 3300013296 Ga0157374_10008126 Ga0157374_100081267 534
147 3300013297 Ga0157378_10035410 Ga0157378_100354104 534
148 3300013306 Ga0163162_10015270 Ga0163162_100152704 534
149 3300014745 Ga0157377_10026386 Ga0157377_100263862 534
150 3300025938 Ga0207704_10067233 Ga0207704_100672332 534
151 3300026023 Ga0207677_10047221 Ga0207677_100472212 534
152 3300026035 Ga0207703_10002784 Ga0207703_100027847 534
153 3300026118 Ga0207675_100052538 Ga0207675_1000525382 534
154 3300048915 Ga0496112_0003953 Ga0496112_0003953_6339_7943 534

Structural Annotation

Top 5 Hits

ID Description Score Start End
6p2r-assembly1.cif.gz_B structure of s. cerevisiae protein o-mannosyltransferase pmt1-pmt2 complex bound to the sugar donor 0.6104 15 260
6x0o-assembly1.cif.gz_A single-particle cryo-em structure of arabinosyltransferase embb from mycobacterium smegmatis 0.55 20 508
6p25-assembly1.cif.gz_A structure of s. cerevisiae protein o-mannosyltransferase pmt1-pmt2 complex bound to the sugar donor and a peptide acceptor 0.5467 17 305
8b6l-assembly1.cif.gz_I subtomogram average of the human sec61-trap-osta-translocon 0.5447 1 419
8agb-assembly1.cif.gz_A structure of yeast oligosaccharylransferase complex with lipid-linked oligosaccharide bound 0.5347 16 419
ID Description Score Start End Superfamily
af_I1N3T8_454_634_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.3034 81 253 1.25.10.10
af_A0A0B4LG35_1_153_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.2976 319 460 1.20.140.150
af_I1N3T8_454_634_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.2909 81 253 1.25.10.10
af_D7UU25_53_322_1.20.1070.10 Mainly Alpha;Up-down Bundle;Rhopdopsin 7-helix transmembrane proteins;Rhodopsin 7-helix transmembrane proteins 0.2867 84 285 1.20.1070.10
af_A2AP89_285_484_1.20.120.810 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Vinculin, Vh2 four-helix bundle 0.2831 40 255 1.20.120.810
ID Description Score Start End GO Terms
AF-A0A2Z5G7Q3-F1-model_v4 Glycosyltransferase RgtA/B/C/D-like domain-containing protein 0.9711 19 522 GO:0016020
AF-A0A2Z5G7Q3-F1-model_v4 Glycosyltransferase RgtA/B/C/D-like domain-containing protein 0.9598 19 522 GO:0016020
AF-A0A2V9PPB8-F1-model_v4 Glycosyltransferase RgtA/B/C/D-like domain-containing protein 0.9524 124 528 GO:0016020
AF-A0A2V9T6F7-F1-model_v4 DUF2029 domain-containing protein 0.9454 210 527 GO:0016020
AF-A0A2V9PPB8-F1-model_v4 Glycosyltransferase RgtA/B/C/D-like domain-containing protein 0.9433 124 528 GO:0016020

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pLDDT pTM Quality
86.53 0.89 High
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Predicted Structure (AlphaFold2)

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