F217826

General Info

Members Datasets Scaffolds Average Seq Length
153 81 150 376

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0020921|Ga0495638_0020921_2061_3359
Length 432
Sequence MLLTAGGYGLTLLATLYALAALLCRARARRARPDQSRRLPVTVFKPLCGPEPRLEANLATLCEQAGPGCQLLFGVRDPLDPVIAVVERLMRRYPALDIALVVDPRVHGTNLKVSNLINMARSARNPWLVIADSDIAAGPGYLDKVTAPLADPEVGIVTCLYHGRPAGGFWTRLGALFIDTWFAPSVRVASALGSTAFGFGATIALRAETLRAIGGFEALRNRLADDFWLGELTRRQGLATVLSEVYVTTDVTEDDLGSLFSRERRWMKTIRSINPAGYAFSFITFTFPMLAAGLWLAPAWPNLAVACVGMAARLGLHWRRPAAGVPAPGHAALGPLRDCLLLAAWLSAFVGSTTRWRRHTLPVDRCARKTSSASKHLAARMYTNLKKRRSRAGGNPIFPAQPLRHPPAAARPKWGPRLRGDDEPRSANVHRS

Samples

Sample ID Description Type Environment
1 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
2 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
3 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
4 3300003577 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
6 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
7 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
8 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
9 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
10 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
11 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
12 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
13 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
14 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
15 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
16 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
17 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
18 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
19 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
20 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
21 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
22 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
23 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
24 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
25 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
26 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
27 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
28 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
29 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
30 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
31 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
32 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
33 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
34 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
35 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
36 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
37 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
38 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
39 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
40 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
41 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
42 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
43 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
44 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
45 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
46 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
47 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
48 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
49 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
50 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
51 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
52 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
53 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
54 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
55 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
56 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
57 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
58 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
59 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
60 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
61 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
62 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
63 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
64 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
65 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
66 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
67 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
68 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
69 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
70 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
71 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
72 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
73 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
74 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
75 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
76 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
77 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
78 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
79 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
80 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
81 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 97.39
Metatranscriptomes 0.65
Isolates 1.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.31
Nodule 1.96
Rhizoplane 2.61
Rhizosphere 92.16
Stem 0
Stem Tuber 0
Unclassified 1.96

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10020781 3300003187 Bacteria 2762
2 Ga0007416J51690_1027257 3300003577 Bacteria 4924
3 Ga0070712_100065923 3300006175 Bacteria 2572
4 Ga0209025_1000151 3300025294 Bacteria 172081
5 Ga0207654_10006781 3300025911 Bacteria 5760
6 Ga0207698_10055855 3300026142 Bacteria 3046
7 Ga0265338_10000599 3300028800 Bacteria 63449
8 Ga0395899_0001219 3300037312 Bacteria 22520
9 Ga0395900_0000730 3300037418 Bacteria 43743
10 Ga0395898_0011328 3300037466 Bacteria 9270
11 Ga0395905_0042013 3300037471 Bacteria 4290
12 Ga0395905_0078748 3300037471 Bacteria 3089
13 Ga0395905_0180776 3300037471 Bacteria 1980
14 Ga0395901_0007645 3300038443 Bacteria 10907
15 Ga0466972_0048498 3300044658 Bacteria 2052
16 Ga0466970_0030315 3300044765 Bacteria 2852
17 Ga0466957_0060600 3300044842 Bacteria 2320
18 Ga0466957_0076057 3300044842 Bacteria 2084
19 Ga0466959_0014182 3300045049 Bacteria 5784
20 Ga0466959_0089697 3300045049 Bacteria 2209
21 Ga0495590_0002173 3300046457 Bacteria 8221
22 Ga0495590_0027649 3300046457 Bacteria 1989
23 Ga0495629_0012437 3300046459 Bacteria 6164
24 Ga0495638_0020921 3300046460 Bacteria 4319
25 Ga0495653_0082155 3300046463 Bacteria 2379
26 Ga0495653_0203184 3300046463 Bacteria 1343
27 Ga0495653_0222390 3300046463 Bacteria 1268
28 Ga0495580_0273772 3300046472 Bacteria 1152
29 Ga0495582_0052589 3300046473 Bacteria 2246
30 Ga0495605_0006535 3300046474 Bacteria 6693
31 Ga0495584_0019864 3300046491 Bacteria 3413
32 Ga0495584_0037605 3300046491 Bacteria 2447
33 Ga0495584_0048646 3300046491 Bacteria 2137
34 Ga0495584_0170886 3300046491 Bacteria 1105
35 Ga0495585_0001421 3300046492 Bacteria 18833
36 Ga0495585_0002418 3300046492 Bacteria 13371
37 Ga0495585_0005221 3300046492 Bacteria 8232
38 Ga0495585_0019796 3300046492 Bacteria 3877
39 Ga0495585_0048094 3300046492 Bacteria 2372
40 Ga0495596_0003581 3300046500 Bacteria 7818
41 Ga0495596_0035073 3300046500 Bacteria 1990
42 Ga0495596_0042533 3300046500 Bacteria 1790
43 Ga0495607_0013814 3300046501 Bacteria 5277
44 Ga0495607_0041129 3300046501 Bacteria 2747
45 Ga0495583_0001580 3300046506 Bacteria 22480
46 Ga0495606_0001852 3300046507 Bacteria 26592
47 Ga0495606_0014384 3300046507 Bacteria 6182
48 Ga0495606_0129799 3300046507 Bacteria 1499
49 Ga0495616_0000035 3300046513 Bacteria 128636
50 Ga0495616_0017839 3300046513 Bacteria 3910
51 Ga0495616_0076177 3300046513 Bacteria 1612
52 Ga0495631_0000768 3300046518 Bacteria 20650
53 Ga0495631_0057525 3300046518 Bacteria 1692
54 Ga0495632_0024225 3300046519 Bacteria 3228
55 Ga0495643_0000334 3300046522 Bacteria 64400
56 Ga0495663_0020919 3300046525 Bacteria 1880
57 Ga0495666_0003030 3300046526 Bacteria 8435
58 Ga0495666_0003063 3300046526 Bacteria 8404
59 Ga0495666_0033390 3300046526 Bacteria 2513
60 Ga0495642_0002754 3300046528 Bacteria 7053
61 Ga0495642_0004393 3300046528 Bacteria 5474
62 Ga0495642_0023680 3300046528 Bacteria 2425
63 Ga0495642_0041210 3300046528 Bacteria 1878
64 Ga0495642_0064891 3300046528 Bacteria 1519
65 Ga0495642_0075861 3300046528 Bacteria 1411
66 Ga0495652_0019671 3300046529 Bacteria 6011
67 Ga0495654_0055620 3300046530 Bacteria 1915
68 Ga0495665_0000586 3300046531 Bacteria 18594
69 Ga0495665_0076274 3300046531 Bacteria 1764
70 Ga0495587_0013956 3300046536 Bacteria 5044
71 Ga0495609_0010972 3300046538 Bacteria 4328
72 Ga0495597_0002315 3300046542 Bacteria 12358
73 Ga0495597_0006042 3300046542 Bacteria 6305
74 Ga0495597_0006491 3300046542 Bacteria 6046
75 Ga0495597_0009998 3300046542 Bacteria 4659
76 Ga0495597_0042849 3300046542 Bacteria 2017
77 Ga0495622_0007313 3300046557 Bacteria 5127
78 Ga0495622_0033349 3300046557 Bacteria 2403
79 Ga0495633_0020984 3300046558 Bacteria 3273
80 Ga0495633_0027070 3300046558 Bacteria 2806
81 Ga0495633_0103238 3300046558 Bacteria 1323
82 Ga0495668_0006805 3300046616 Bacteria 7425
83 Ga0495668_0043848 3300046616 Bacteria 2486
84 Ga0495668_0051222 3300046616 Bacteria 2286
85 Ga0495668_0094316 3300046616 Bacteria 1638
86 Ga0495634_0020973 3300046642 Bacteria 4628
87 Ga0495611_0042710 3300046648 Bacteria 2025
88 Ga0495625_0062858 3300046660 Bacteria 2623
89 Ga0495635_0011207 3300046663 Bacteria 6285
90 Ga0495661_0000449 3300046665 Bacteria 43512
91 Ga0495661_0007230 3300046665 Bacteria 7743
92 Ga0495661_0045963 3300046665 Bacteria 2667
93 Ga0495661_0056004 3300046665 Bacteria 2361
94 Ga0495661_0067581 3300046665 Bacteria 2099
95 Ga0495588_0000880 3300046674 Bacteria 13268
96 Ga0495588_0054968 3300046674 Bacteria 2054
97 Ga0495588_0055230 3300046674 Bacteria 2049
98 Ga0495623_0064391 3300046679 Bacteria 2294
99 Ga0495623_0073583 3300046679 Bacteria 2124
100 Ga0495623_0098613 3300046679 Bacteria 1783
101 Ga0495646_0130083 3300046680 Bacteria 1418
102 Ga0495624_0001344 3300046690 Bacteria 19219
103 Ga0495624_0133932 3300046690 Bacteria 1519
104 Ga0495670_0010729 3300046691 Bacteria 4501
105 Ga0495670_0046686 3300046691 Bacteria 2163
106 Ga0495671_0015891 3300046692 Bacteria 4028
107 Ga0495649_0000653 3300046694 Bacteria 28254
108 Ga0495649_0111685 3300046694 Bacteria 1449
109 Ga0495589_0000131 3300046794 Bacteria 68535
110 Ga0495589_0016518 3300046794 Bacteria 3794
111 Ga0495589_0039690 3300046794 Bacteria 2352
112 Ga0495589_0087560 3300046794 Bacteria 1512
113 Ga0495600_0084113 3300046809 Bacteria 2076
114 Ga0495581_0042801 3300047315 Bacteria 2620
115 Ga0495604_0017171 3300047317 Bacteria 5789
116 Ga0495604_0042651 3300047317 Bacteria 3554
117 Ga0495674_0021719 3300047319 Bacteria 5933
118 Ga0495674_0250640 3300047319 Bacteria 1457
119 Ga0495672_0000513 3300047320 Bacteria 44547
120 Ga0495676_0000064 3300047321 Bacteria 81355
121 Ga0495676_0045381 3300047321 Bacteria 3578
122 Ga0495683_0004793 3300047323 Bacteria 7598
123 Ga0495683_0058124 3300047323 Bacteria 1921
124 Ga0495687_000052 3300047443 Bacteria 199186
125 Ga0495687_034802 3300047443 Bacteria 2271
126 Ga0495675_0071883 3300047444 Bacteria 2183
127 Ga0495677_0009668 3300047445 Bacteria 3556
128 Ga0495677_0018232 3300047445 Bacteria 2544
129 Ga0495677_0028713 3300047445 Bacteria 2022
130 Ga0495681_0000438 3300047470 Bacteria 31904
131 Ga0495681_0006547 3300047470 Bacteria 7632
132 Ga0495681_0015407 3300047470 Bacteria 4326
133 Ga0495681_0073876 3300047470 Bacteria 1539
134 Ga0495686_0019451 3300047472 Bacteria 4535
135 Ga0495593_0014532 3300047673 Bacteria 4474
136 Ga0495593_0022564 3300047673 Bacteria 3505
137 Ga0495626_0000066 3300048091 Bacteria 141280
138 Ga0495626_0014070 3300048091 Bacteria 4138
139 Ga0495626_0019212 3300048091 Bacteria 3418
140 Ga0495626_0026832 3300048091 Bacteria 2803
141 Ga0495626_0030926 3300048091 Bacteria 2580
142 Ga0495626_0043927 3300048091 Bacteria 2095
143 Ga0495626_0053553 3300048091 Bacteria 1856
144 Ga0496109_0003947 3300048912 Bacteria 12392
145 Ga0496113_0106369 3300048916 Bacteria 2179
146 Ga0496115_0006630 3300048918 Bacteria 8491
147 Ga0496115_0073291 3300048918 Bacteria 2779
148 Ga0496122_0002113 3300048925 Bacteria 29433
149 Ga0496123_0001047 3300048926 Bacteria 41783
150 Ga0496125_0002815 3300048928 Bacteria 21951

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046491 Ga0495584_0170886 Ga0495584_0170886_24_929 260
2 3300046472 Ga0495580_0273772 Ga0495580_0273772_105_1130 274
3 3300046528 Ga0495642_0041210 Ga0495642_0041210_60_1073 283
4 3300046500 Ga0495596_0035073 Ga0495596_0035073_925_1944 298
5 3300046526 Ga0495666_0003030 Ga0495666_0003030_833_1966 317
6 3300046531 Ga0495665_0076274 Ga0495665_0076274_405_1538 317
7 3300046522 Ga0495643_0000334 Ga0495643_0000334_49774_50961 320
8 3300046500 Ga0495596_0042533 Ga0495596_0042533_491_1624 322
9 3300046530 Ga0495654_0055620 Ga0495654_0055620_28_1185 323
10 3300046542 Ga0495597_0009998 Ga0495597_0009998_1566_2723 323
11 3300044842 Ga0466957_0076057 Ga0466957_0076057_698_1855 324
12 3300046506 Ga0495583_0001580 Ga0495583_0001580_1119_2306 325
13 3300046557 Ga0495622_0007313 Ga0495622_0007313_3519_4649 326
14 3300046674 Ga0495588_0000880 Ga0495588_0000880_11416_12546 326
15 3300047321 Ga0495676_0000064 Ga0495676_0000064_57647_58777 326
16 3300048091 Ga0495626_0019212 Ga0495626_0019212_1461_2579 326
17 3300046694 Ga0495649_0000653 Ga0495649_0000653_14282_15361 327
18 3300048091 Ga0495626_0014070 Ga0495626_0014070_565_1644 327
19 3300006175 Ga0070712_100065923 Ga0070712_1000659232 328
20 3300046463 Ga0495653_0222390 Ga0495653_0222390_91_1209 328
21 3300046663 Ga0495635_0011207 Ga0495635_0011207_4985_6103 328
22 3300047444 Ga0495675_0071883 Ga0495675_0071883_484_1602 328
23 3300047673 Ga0495593_0022564 Ga0495593_0022564_114_1232 328
24 3300003577 Ga0007416J51690_1027257 Ga0007416J51690_10272573 329
25 3300025911 Ga0207654_10006781 Ga0207654_100067816 330
26 3300026142 Ga0207698_10055855 Ga0207698_100558552 330
27 3300037418 Ga0395900_0000730 Ga0395900_0000730_9209_10312 330
28 3300037466 Ga0395898_0011328 Ga0395898_0011328_7888_8991 330
29 3300037471 Ga0395905_0180776 Ga0395905_0180776_732_1835 330
30 3300038443 Ga0395901_0007645 Ga0395901_0007645_6623_7726 330
31 3300044658 Ga0466972_0048498 Ga0466972_0048498_435_1538 330
32 3300044842 Ga0466957_0060600 Ga0466957_0060600_1099_2202 330
33 3300045049 Ga0466959_0089697 Ga0466959_0089697_255_1358 330
34 3300046507 Ga0495606_0001852 Ga0495606_0001852_785_1879 330
35 3300046507 Ga0495606_0129799 Ga0495606_0129799_199_1293 330
36 3300046528 Ga0495642_0002754 Ga0495642_0002754_791_1885 330
37 3300046528 Ga0495642_0064891 Ga0495642_0064891_120_1214 330
38 3300046542 Ga0495597_0042849 Ga0495597_0042849_241_1377 330
39 3300046616 Ga0495668_0051222 Ga0495668_0051222_321_1415 330
40 3300046665 Ga0495661_0007230 Ga0495661_0007230_5900_6994 330
41 3300046692 Ga0495671_0015891 Ga0495671_0015891_636_1730 330
42 3300048091 Ga0495626_0043927 Ga0495626_0043927_315_1427 330
43 3300048918 Ga0496115_0006630 Ga0496115_0006630_1637_2743 330
44 3300046463 Ga0495653_0082155 Ga0495653_0082155_415_1509 331
45 3300046474 Ga0495605_0006535 Ga0495605_0006535_2455_3576 331
46 3300046491 Ga0495584_0037605 Ga0495584_0037605_511_1656 331
47 3300046492 Ga0495585_0002418 Ga0495585_0002418_435_1580 331
48 3300046492 Ga0495585_0019796 Ga0495585_0019796_1837_2958 331
49 3300046500 Ga0495596_0003581 Ga0495596_0003581_835_1956 331
50 3300046501 Ga0495607_0013814 Ga0495607_0013814_858_1979 331
51 3300046513 Ga0495616_0000035 Ga0495616_0000035_40748_41893 331
52 3300046513 Ga0495616_0017839 Ga0495616_0017839_430_1551 331
53 3300046518 Ga0495631_0000768 Ga0495631_0000768_880_2025 331
54 3300046526 Ga0495666_0003063 Ga0495666_0003063_858_1952 331
55 3300046529 Ga0495652_0019671 Ga0495652_0019671_4151_5245 331
56 3300046558 Ga0495633_0027070 Ga0495633_0027070_1061_2206 331
57 3300046616 Ga0495668_0043848 Ga0495668_0043848_824_1969 331
58 3300046642 Ga0495634_0020973 Ga0495634_0020973_897_1991 331
59 3300046648 Ga0495611_0042710 Ga0495611_0042710_151_1296 331
60 3300046665 Ga0495661_0000449 Ga0495661_0000449_11831_12976 331
61 3300046665 Ga0495661_0056004 Ga0495661_0056004_740_1861 331
62 3300046679 Ga0495623_0064391 Ga0495623_0064391_498_1592 331
63 3300046690 Ga0495624_0133932 Ga0495624_0133932_198_1292 331
64 3300046691 Ga0495670_0046686 Ga0495670_0046686_300_1445 331
65 3300046694 Ga0495649_0111685 Ga0495649_0111685_134_1255 331
66 3300046794 Ga0495589_0016518 Ga0495589_0016518_1960_3081 331
67 3300047317 Ga0495604_0017171 Ga0495604_0017171_4083_5177 331
68 3300047323 Ga0495683_0004793 Ga0495683_0004793_624_1745 331
69 3300047445 Ga0495677_0018232 Ga0495677_0018232_619_1764 331
70 3300047445 Ga0495677_0028713 Ga0495677_0028713_399_1520 331
71 3300047470 Ga0495681_0000438 Ga0495681_0000438_9856_11001 331
72 3300048091 Ga0495626_0026832 Ga0495626_0026832_848_1969 331
73 3300048091 Ga0495626_0030926 Ga0495626_0030926_16_1137 331
74 3300048918 Ga0496115_0073291 Ga0496115_0073291_1167_2264 331
75 3300046457 Ga0495590_0002173 Ga0495590_0002173_3262_4422 332
76 3300046542 Ga0495597_0006042 Ga0495597_0006042_3924_5036 332
77 3300047320 Ga0495672_0000513 Ga0495672_0000513_12071_13198 332
78 3300037471 Ga0395905_0042013 Ga0395905_0042013_1311_2447 333
79 3300044765 Ga0466970_0030315 Ga0466970_0030315_565_1701 333
80 3300045049 Ga0466959_0014182 Ga0466959_0014182_446_1582 333
81 3300046463 Ga0495653_0203184 Ga0495653_0203184_66_1172 333
82 3300046491 Ga0495584_0019864 Ga0495584_0019864_1355_2482 333
83 3300046492 Ga0495585_0048094 Ga0495585_0048094_30_1157 333
84 3300046525 Ga0495663_0020919 Ga0495663_0020919_724_1851 333
85 3300046528 Ga0495642_0023680 Ga0495642_0023680_379_1506 333
86 3300046542 Ga0495597_0006491 Ga0495597_0006491_2133_3260 333
87 3300046558 Ga0495633_0020984 Ga0495633_0020984_15_1142 333
88 3300046616 Ga0495668_0006805 Ga0495668_0006805_3512_4639 333
89 3300046665 Ga0495661_0045963 Ga0495661_0045963_301_1428 333
90 3300046691 Ga0495670_0010729 Ga0495670_0010729_1745_2872 333
91 3300046794 Ga0495589_0039690 Ga0495589_0039690_419_1546 333
92 3300047445 Ga0495677_0009668 Ga0495677_0009668_1573_2700 333
93 3300047470 Ga0495681_0015407 Ga0495681_0015407_1385_2512 333
94 3300028800 Ga0265338_10000599 Ga0265338_100005995 334
95 3300046473 Ga0495582_0052589 Ga0495582_0052589_454_1590 334
96 3300046491 Ga0495584_0048646 Ga0495584_0048646_636_1769 334
97 3300046492 Ga0495585_0001421 Ga0495585_0001421_7791_8924 334
98 3300046518 Ga0495631_0057525 Ga0495631_0057525_88_1221 334
99 3300046526 Ga0495666_0033390 Ga0495666_0033390_887_2023 334
100 3300046536 Ga0495587_0013956 Ga0495587_0013956_1223_2359 334
101 3300046558 Ga0495633_0103238 Ga0495633_0103238_77_1210 334
102 3300046660 Ga0495625_0062858 Ga0495625_0062858_613_1749 334
103 3300046674 Ga0495588_0054968 Ga0495588_0054968_172_1293 334
104 3300046674 Ga0495588_0055230 Ga0495588_0055230_81_1217 334
105 3300046679 Ga0495623_0073583 Ga0495623_0073583_686_1810 334
106 3300046679 Ga0495623_0098613 Ga0495623_0098613_262_1383 334
107 3300046680 Ga0495646_0130083 Ga0495646_0130083_160_1296 334
108 3300046809 Ga0495600_0084113 Ga0495600_0084113_579_1715 334
109 3300047317 Ga0495604_0042651 Ga0495604_0042651_2379_3500 334
110 3300047319 Ga0495674_0250640 Ga0495674_0250640_139_1275 334
111 3300047321 Ga0495676_0045381 Ga0495676_0045381_398_1534 334
112 3300047673 Ga0495593_0014532 Ga0495593_0014532_170_1306 334
113 3300046531 Ga0495665_0000586 Ga0495665_0000586_829_1953 335
114 3300046557 Ga0495622_0033349 Ga0495622_0033349_571_1695 335
115 3300046665 Ga0495661_0067581 Ga0495661_0067581_246_1358 335
116 3300046690 Ga0495624_0001344 Ga0495624_0001344_1522_2646 335
117 3300047315 Ga0495581_0042801 Ga0495581_0042801_735_1859 335
118 3300047443 Ga0495687_000052 Ga0495687_000052_82354_83490 335
119 3300047470 Ga0495681_0006547 Ga0495681_0006547_5898_7010 335
120 3300046459 Ga0495629_0012437 Ga0495629_0012437_470_1600 336
121 3300046528 Ga0495642_0004393 Ga0495642_0004393_2188_3309 336
122 3300046542 Ga0495597_0002315 Ga0495597_0002315_3915_5072 336
123 3300046794 Ga0495589_0000131 Ga0495589_0000131_54199_55356 336
124 3300047319 Ga0495674_0021719 Ga0495674_0021719_861_1991 336
125 3300046457 Ga0495590_0027649 Ga0495590_0027649_603_1754 340
126 3300037312 Ga0395899_0001219 Ga0395899_0001219_281_1477 342
127 3300047472 Ga0495686_0019451 Ga0495686_0019451_398_1573 343
128 3300048091 Ga0495626_0000066 Ga0495626_0000066_98907_100073 343
129 3300037471 Ga0395905_0078748 Ga0395905_0078748_1166_2326 345
130 3300048912 Ga0496109_0003947 Ga0496109_0003947_10380_11558 347
131 3300048916 Ga0496113_0106369 Ga0496113_0106369_438_1616 347
132 3300048925 Ga0496122_0002113 Ga0496122_0002113_16655_17833 347
133 3300048926 Ga0496123_0001047 Ga0496123_0001047_34583_35761 347
134 3300048928 Ga0496125_0002815 Ga0496125_0002815_16828_18006 347
135 3300046460 Ga0495638_0020921 Ga0495638_0020921_2061_3359 350
136 3300046492 Ga0495585_0005221 Ga0495585_0005221_755_2008 350
137 3300046501 Ga0495607_0041129 Ga0495607_0041129_1201_2487 350
138 3300046507 Ga0495606_0014384 Ga0495606_0014384_718_1971 350
139 3300046513 Ga0495616_0076177 Ga0495616_0076177_200_1498 350
140 3300046519 Ga0495632_0024225 Ga0495632_0024225_730_1998 350
141 3300046528 Ga0495642_0075861 Ga0495642_0075861_27_1256 350
142 3300046538 Ga0495609_0010972 Ga0495609_0010972_586_1839 350
143 3300046616 Ga0495668_0094316 Ga0495668_0094316_112_1410 350
144 3300046794 Ga0495589_0087560 Ga0495589_0087560_75_1328 350
145 3300047323 Ga0495683_0058124 Ga0495683_0058124_107_1360 350
146 3300047443 Ga0495687_034802 Ga0495687_034802_274_1503 350
147 3300047470 Ga0495681_0073876 Ga0495681_0073876_265_1518 350
148 3300048091 Ga0495626_0053553 Ga0495626_0053553_403_1689 350
149 iso_pu_bacteria 2513237150 2513954927 350
150 iso_pu_bacteria 2513237165 2514042803 350
151 iso_pu_bacteria 644736347 644751964 350
152 3300003187 JGI25151J46595_10020781 JGI25151J46595_100207812 351
153 3300025294 Ga0209025_1000151 Ga0209025_100015149 351

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13641

Glyco_tranf_2_3

Glycosyltransferase like family 2

40

269

0.93

PF13632

Glyco_trans_2_3

Glycosyl transferase family group 2

127

350

0.92

PF13506

Glyco_transf_21

Glycosyl transferase family 21

94

268

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6p61-assembly2.cif.gz_B structure of a glycosyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.744 38 250
6p61-assembly2.cif.gz_B structure of a glycosyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.7336 38 250
6p61-assembly3.cif.gz_C structure of a glycosyltransferase from leptospira borgpetersenii serovar hardjo-bovis (strain jb197) 0.7291 38 250
2z87-assembly3.cif.gz_B crystal structure of chondroitin polymerase from escherichia coli strain k4 (k4cp) complexed with udp-galnac and udp 0.7187 41 261
2z86-assembly1.cif.gz_B crystal structure of chondroitin polymerase from escherichia coli strain k4 (k4cp) complexed with udp-glcua and udp 0.7157 39 261
ID Description Score Start End Superfamily
af_Q5AMQ4_66_210_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9563 40 150 3.90.550.10
af_F1QNT4_83_310_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.9219 30 255 3.90.550.10
af_F1QNT4_83_310_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8911 30 255 3.90.550.10
af_Q21054_95_328_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8802 22 249 3.90.550.10
af_Q9RQP9_29_257_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8631 39 255 3.90.550.10
ID Description Score Start End GO Terms
AF-E3NXM8-F1-model_v4 Ceramide glucosyltransferase (EC 2.4.1.80) (Glucosylceramide synthase) (UDP-glucose ceramide glucosyltransferase) (UDP-glucose:N-acylsphingosine D-glucosyltransferase) 0.9583 39 149 GO:0006679
GO:0008120
GO:0016020
AF-A0A383DLT0-F1-model_v4 Glycosyltransferase 2-like domain-containing protein 0.9498 38 172 GO:0006679
GO:0008120
GO:0016020
AF-A0A0S3U9H4-F1-model_v4 Glycosyl transferase, group 2 family protein, putative 0.9349 2 276 GO:0006679
GO:0008120
GO:0016020
AF-A0A7Y4UGA2-F1-model_v4 Glycosyltransferase 0.9305 1 253 GO:0006679
GO:0008120
GO:0016020
AF-A0A1W4UJ29-F1-model_v4 deleted 0.9234 2 220

Feature Viewer

pLDDT pTM Quality
75.83 0.76 High
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Predicted Structure (AlphaFold2)

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