F217718

General Info

Members Datasets Scaffolds Average Seq Length
153 135 306 217

Family's Representative Sequence

Representative Sequence 3300044656|Ga0466969_0005502|Ga0466969_0005502_5710_6375
Length 211
Sequence MTALAALLVLADGRFPAGGHAHSGGAEAAVRAGRITDAATLEAFCRGRLHSTGLTALDPVTLDDAAEARTASPALRAASRRLGRQLLRAARAAWPSPEIEALAAARPRGAHQPVVLGLVAASAGLGPYDAASAVAYEAVSGPATACVRLLGLDPFETAAVLARLAPEVDAVARRAAEAVHDGVEGLPAASAPLLDLYAEQHAAWPVRLFAS

Samples

Sample ID Description Type Environment
1 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
5 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
6 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
7 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
8 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
9 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
10 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
11 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
12 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
13 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
14 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
15 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
16 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
17 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
18 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
19 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
20 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
21 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
22 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
23 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
24 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
25 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
26 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
27 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
28 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
29 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
30 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
31 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
32 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
33 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
34 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
35 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
36 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
37 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
38 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
39 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
40 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
41 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
42 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
43 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
44 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
45 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
46 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
47 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
48 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
49 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
50 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
51 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
52 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
53 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
54 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
55 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
56 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
57 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
58 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
59 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
60 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
61 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
62 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
63 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
64 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
71 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
72 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
73 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
74 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
75 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
76 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
77 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
78 2643221548 Streptomyces sp. Root55 Isolate Unclassified
79 2643221578 Streptomyces sp. Root63 Isolate Unclassified
80 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
81 2643221670 Streptomyces sp. Root431 Isolate Unclassified
82 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
83 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
84 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
85 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
86 2643221714 Streptomyces sp. Root264 Isolate Unclassified
87 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
88 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
89 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
90 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
91 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
92 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
93 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
94 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
95 2808606448 Streptomyces sp. 193411 Isolate Unclassified
96 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
97 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
98 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
99 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
100 2862574272 Streptomyces sp. AcE210 Isolate Nodule
101 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
102 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
103 2867475112 Streptomyces sp. TM32 Isolate Unclassified
104 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
105 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
106 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
107 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
108 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
109 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
110 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
111 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
112 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
113 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
114 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
115 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
116 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
117 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
118 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
119 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
120 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
121 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
122 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
123 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
124 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
125 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
126 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
127 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
128 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
129 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
130 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
131 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
132 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
133 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
134 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
135 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 60.78
Metatranscriptomes 0
Isolates 39.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.58
Nodule 0.65
Rhizoplane 0.65
Rhizosphere 66.01
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466969_0005502 3300044656 Bacteria 6731
2 rootH1_10195014 3300003323 Bacteria 1239
3 JGI25160J50197_1022991 3300003354 Bacteria 1814
4 JGI25160J50197_1027342 3300003354 Bacteria 1555
5 Ga0182008_10004158 3300014497 Bacteria 8522
6 Ga0182007_10000170 3300015262 Bacteria 44373
7 Ga0207426_1001773 3300025302 Bacteria 16274
8 Ga0207426_1006426 3300025302 Bacteria 5119
9 Ga0307517_10004498 3300028786 Bacteria 21398
10 Ga0307515_10506201 3300028794 Bacteria 818
11 Ga0307512_10114411 3300030522 Bacteria 1761
12 Ga0307513_10061423 3300031456 Bacteria 3978
13 Ga0307508_10178509 3300031616 Bacteria 1726
14 Ga0307508_10363488 3300031616 Bacteria 1038
15 Ga0307514_10011710 3300031649 Bacteria 7297
16 Ga0307514_10024550 3300031649 Bacteria 4878
17 Ga0307514_10092645 3300031649 Bacteria 2197
18 Ga0307516_10046555 3300031730 Bacteria 4279
19 Ga0307510_10070054 3300033180 Bacteria 3506
20 Ga0307510_10188561 3300033180 Bacteria 1613
21 Ga0307510_10234431 3300033180 Bacteria 1335
22 Ga0395900_0541066 3300037418 Bacteria 1110
23 Ga0395898_0015611 3300037466 Bacteria 7785
24 Ga0451837_0374265 3300041494 Bacteria 2461
25 Ga0439449_0036872 3300042007 Bacteria 1818
26 Ga0439457_000045 3300042014 Bacteria 26189
27 Ga0466969_0056164 3300044656 Bacteria 1923
28 Ga0466972_0019884 3300044658 Bacteria 3356
29 Ga0466965_0003378 3300044683 Bacteria 6990
30 Ga0466965_0382049 3300044683 Bacteria 776
31 Ga0466966_0033502 3300044684 Bacteria 3326
32 Ga0466966_0090975 3300044684 Bacteria 1894
33 Ga0466961_0017567 3300044693 Bacteria 4597
34 Ga0466961_0039250 3300044693 Bacteria 3035
35 Ga0466963_0580988 3300044694 Bacteria 791
36 Ga0466964_0021174 3300044706 Bacteria 2513
37 Ga0466971_0016737 3300044719 Bacteria 3238
38 Ga0466968_0148437 3300044735 Bacteria 1076
39 Ga0466957_0339194 3300044842 Bacteria 1017
40 Ga0466959_0105795 3300045049 Bacteria 2012
41 Ga0466967_0261293 3300045976 Bacteria 1656
42 Ga0495592_0005849 3300046454 Bacteria 9126
43 Ga0495603_0031997 3300046455 Bacteria 3166
44 Ga0495590_0110488 3300046457 Bacteria 981
45 Ga0495629_0025423 3300046459 Bacteria 4207
46 Ga0495653_0009957 3300046463 Bacteria 7778
47 Ga0495580_0264673 3300046472 Bacteria 1175
48 Ga0495662_0002625 3300046476 Bacteria 9090
49 Ga0495664_0020182 3300046477 Bacteria 3840
50 Ga0495630_0008738 3300046517 Bacteria 7277
51 Ga0495666_0002297 3300046526 Bacteria 9525
52 Ga0495652_0026977 3300046529 Bacteria 5066
53 Ga0495665_0006988 3300046531 Bacteria 6089
54 Ga0495640_0009160 3300046533 Bacteria 7725
55 Ga0495640_0309449 3300046533 Bacteria 980
56 Ga0495587_0242740 3300046536 Bacteria 1013
57 Ga0495634_0025517 3300046642 Bacteria 4133
58 Ga0495625_0012478 3300046660 Bacteria 6883
59 Ga0495588_0030283 3300046674 Bacteria 2719
60 Ga0495588_0072818 3300046674 Bacteria 1788
61 Ga0495657_0010386 3300046675 Bacteria 7008
62 Ga0495599_0005798 3300046678 Bacteria 7413
63 Ga0495646_0005851 3300046680 Bacteria 7797
64 Ga0495613_0005069 3300046689 Bacteria 9879
65 Ga0495671_0022899 3300046692 Bacteria 3267
66 Ga0495600_0016754 3300046809 Bacteria 4657
67 Ga0495604_0000172 3300047317 Bacteria 57028
68 Ga0495636_0034012 3300047318 Bacteria 2097
69 Ga0495674_0025869 3300047319 Bacteria 5372
70 Ga0495676_0101540 3300047321 Bacteria 2127
71 Ga0495687_143715 3300047443 Bacteria 826
72 Ga0495685_010460 3300047447 Bacteria 3112
73 Ga0495681_0004621 3300047470 Bacteria 9350
74 Ga0495684_0011063 3300047471 Bacteria 6975
75 Ga0495593_0010936 3300047673 Bacteria 5227
76 Ga0495602_0023757 3300048088 Bacteria 5964
77 Ga0501031_0048307 3300049568 Bacteria 2774
78 Ga0501032_0037379 3300049569 Bacteria 3311
79 Ga0501037_0485240 3300049573 Bacteria 840
80 Ga0501043_0123317 3300049579 Bacteria 2032
81 Ga0501047_0135572 3300049581 Bacteria 2342
82 Ga0501035_0083527 3300049822 Bacteria 2818
83 Ga0501035_0133274 3300049822 Bacteria 2165
84 Ga0501044_0051284 3300049823 Bacteria 4254
85 Ga0501044_0070776 3300049823 Bacteria 3548
86 Ga0501044_0165028 3300049823 Bacteria 2189
87 Ga0495601_0021479 3300053077 Bacteria 3954
88 Ga0500610_0095733 3300053079 Bacteria 1540
89 Ga0495619_0004063 3300053085 Bacteria 9372
90 Ga0500560_035550 3300053107 Bacteria 1534
91 Ga0500586_094315 3300053145 Bacteria 1050
92 Ga0466962_0000471 3300061719 Bacteria 17515
93 Ga0466962_0493254 3300061719 Bacteria 619
94 2547409095 2547132111 Bacteria 8013147
95 2643764418 2643221548 Bacteria 8053412
96 2643905093 2643221578 Bacteria 9213798
97 2643942575 2643221587 Bacteria 7586415
98 2644386060 2643221670 Bacteria 6497041
99 2644403151 2643221673 Bacteria 9196637
100 2644430034 2643221677 Bacteria 7584031
101 2644438307 2643221678 Bacteria 9540101
102 2644458523 2643221682 Bacteria 6743283
103 2644630062 2643221714 Bacteria 9015452
104 2753073795 2751185734 Bacteria 8863695
105 2768645009 2767802112 Bacteria 6465194
106 2784586491 2784132148 Bacteria 8627943
107 2785346020 2784746763 Bacteria 9783172
108 2785366887 2784746768 Bacteria 10036182
109 2793981090 2791355406 Bacteria 11364898
110 2804843498 2802429296 Bacteria 7227771
111 2808847388 2808606359 Bacteria 9866990
112 2809230003 2808606448 Bacteria 8656184
113 2819699306 2818991463 Bacteria 7948711
114 2862181308 2862178590 Bacteria 8583590
115 2862289984 2862281513 Bacteria 9621493
116 2862296523 2862290372 Bacteria 7471434
117 2862580284 2862574272 Bacteria 10567477
118 2863407286 2863404153 Bacteria 9672205
119 2867352628 2867346516 Bacteria 7608576
120 2867481417 2867475112 Bacteria 6909112
121 2870723399 2870721527 Bacteria 9689237
122 2873158658 2873151551 Bacteria 8625867
123 2875392469 2875391855 Bacteria 7600475
124 2877683670 2877676314 Bacteria 9512378
125 2884698657 2884693830 Bacteria 11273186
126 2895451250 2895442618 Bacteria 11027144
127 2912758523 2912757875 Bacteria 7940295
128 2918502267 2918501144 Bacteria 8668083
129 2919474345 2919468124 Bacteria 9133025
130 2946047112 2946045630 Bacteria 8527308
131 2946052277 2946045630 Bacteria 8527308
132 2947232910 2947224130 Bacteria 9938529
133 2966604684 2966598605 Bacteria 7676064
134 2990089342 2990088156 Bacteria 6657676
135 2995466524 2995463766 Bacteria 8577691
136 2997452756 2997451912 Bacteria 8492419
137 3006396364 3006393351 Bacteria 6615579
138 3006490695 3006486233 Bacteria 8157040
139 3006497118 3006493962 Bacteria 8825450
140 8008488521 8008485437 Bacteria 7198341
141 8008581043 8008574985 Bacteria 7815457
142 8023628653 8023623736 Bacteria 8593882
143 8025418652 8025413630 Bacteria 7014048
144 8025478662 8025478263 Bacteria 8209203
145 8025527432 8025524527 Bacteria 7197316
146 8025535074 8025530807 Bacteria 8495698
147 8047894456 8047893842 Bacteria 11723082
148 8048134791 8048127548 Bacteria 11053136
149 8048364596 8048356638 Bacteria 11044339
150 8048371473 8048369669 Bacteria 11666822
151 8048380274 8048379754 Bacteria 11877923
152 8054164246 8054160619 Bacteria 7783213
153 8056448026 8056447290 Bacteria 7680491
154 Ga0466969_0005502
155 rootH1_10195014
156 JGI25160J50197_1022991
157 JGI25160J50197_1027342
158 Ga0182008_10004158
159 Ga0182007_10000170
160 Ga0207426_1001773
161 Ga0207426_1006426
162 Ga0307517_10004498
163 Ga0307515_10506201
164 Ga0307512_10114411
165 Ga0307513_10061423
166 Ga0307508_10178509
167 Ga0307508_10363488
168 Ga0307514_10011710
169 Ga0307514_10024550
170 Ga0307514_10092645
171 Ga0307516_10046555
172 Ga0307510_10070054
173 Ga0307510_10188561
174 Ga0307510_10234431
175 Ga0395900_0541066
176 Ga0395898_0015611
177 Ga0451837_0374265
178 Ga0439449_0036872
179 Ga0439457_000045
180 Ga0466969_0056164
181 Ga0466972_0019884
182 Ga0466965_0003378
183 Ga0466965_0382049
184 Ga0466966_0033502
185 Ga0466966_0090975
186 Ga0466961_0017567
187 Ga0466961_0039250
188 Ga0466963_0580988
189 Ga0466964_0021174
190 Ga0466971_0016737
191 Ga0466968_0148437
192 Ga0466957_0339194
193 Ga0466959_0105795
194 Ga0466967_0261293
195 Ga0495592_0005849
196 Ga0495603_0031997
197 Ga0495590_0110488
198 Ga0495629_0025423
199 Ga0495653_0009957
200 Ga0495580_0264673
201 Ga0495662_0002625
202 Ga0495664_0020182
203 Ga0495630_0008738
204 Ga0495666_0002297
205 Ga0495652_0026977
206 Ga0495665_0006988
207 Ga0495640_0009160
208 Ga0495640_0309449
209 Ga0495587_0242740
210 Ga0495634_0025517
211 Ga0495625_0012478
212 Ga0495588_0030283
213 Ga0495588_0072818
214 Ga0495657_0010386
215 Ga0495599_0005798
216 Ga0495646_0005851
217 Ga0495613_0005069
218 Ga0495671_0022899
219 Ga0495600_0016754
220 Ga0495604_0000172
221 Ga0495636_0034012
222 Ga0495674_0025869
223 Ga0495676_0101540
224 Ga0495687_143715
225 Ga0495685_010460
226 Ga0495681_0004621
227 Ga0495684_0011063
228 Ga0495593_0010936
229 Ga0495602_0023757
230 Ga0501031_0048307
231 Ga0501032_0037379
232 Ga0501037_0485240
233 Ga0501043_0123317
234 Ga0501047_0135572
235 Ga0501035_0083527
236 Ga0501035_0133274
237 Ga0501044_0051284
238 Ga0501044_0070776
239 Ga0501044_0165028
240 Ga0495601_0021479
241 Ga0500610_0095733
242 Ga0495619_0004063
243 Ga0500560_035550
244 Ga0500586_094315
245 Ga0466962_0000471
246 Ga0466962_0493254
247 2547409095
248 2643764418
249 2643905093
250 2643942575
251 2644386060
252 2644403151
253 2644430034
254 2644438307
255 2644458523
256 2644630062
257 2753073795
258 2768645009
259 2784586491
260 2785346020
261 2785366887
262 2793981090
263 2804843498
264 2808847388
265 2809230003
266 2819699306
267 2862181308
268 2862289984
269 2862296523
270 2862580284
271 2863407286
272 2867352628
273 2867481417
274 2870723399
275 2873158658
276 2875392469
277 2877683670
278 2884698657
279 2895451250
280 2912758523
281 2918502267
282 2919474345
283 2946047112
284 2946052277
285 2947232910
286 2966604684
287 2990089342
288 2995466524
289 2997452756
290 3006396364
291 3006490695
292 3006497118
293 8008488521
294 8008581043
295 8023628653
296 8025418652
297 8025478662
298 8025527432
299 8025535074
300 8047894456
301 8048134791
302 8048364596
303 8048371473
304 8048380274
305 8054164246
306 8056448026

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01730

UreF

UreF

55

165

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hi0-assembly1.cif.gz_C crystal structure of helicobacter pylori urease accessory protein uref/h/g complex 0.8051 1 224
3o1q-assembly1.cif.gz_A native crystal structure of helicobacter pylori urease accessory protein uref 0.8051 1 186
6jc4-assembly2.cif.gz_C crystal structure of the urease accessory protein uref from klebsiella pneumoniae 0.8042 1 185
4hi0-assembly1.cif.gz_C crystal structure of helicobacter pylori urease accessory protein uref/h/g complex 0.8019 1 224
3cxn-assembly2.cif.gz_C structure of the urease accessory protein uref from helicobacter pylori 0.7975 5 186
ID Description Score Start End Superfamily
af_P9WFE5_1_189_1.10.4190.10 Mainly Alpha;Orthogonal Bundle;Urease accessory protein UreF;Urease accessory protein UreF 0.9214 1 186 1.10.4190.10
af_P9WFE5_1_189_1.10.4190.10 Mainly Alpha;Orthogonal Bundle;Urease accessory protein UreF;Urease accessory protein UreF 0.8936 1 186 1.10.4190.10
af_Q2G2K7_3_207_1.10.4190.10 Mainly Alpha;Orthogonal Bundle;Urease accessory protein UreF;Urease accessory protein UreF 0.8813 3 186 1.10.4190.10
af_I1M788_16_217_1.10.4190.10 Mainly Alpha;Orthogonal Bundle;Urease accessory protein UreF;Urease accessory protein UreF 0.84 2 186 1.10.4190.10
3cxnC00 Mainly Alpha;Orthogonal Bundle;Urease accessory protein UreF;Urease accessory protein UreF 0.8149 5 186 1.10.4190.10
ID Description Score Start End GO Terms
AF-A0A0M8RD28-F1-model_v4 deleted 0.9959 33 195
AF-A0A6G2PSH9-F1-model_v4 Urease accessory protein UreF 0.9893 55 224 GO:0016151
AF-A0A0M8RD28-F1-model_v4 deleted 0.9838 33 195
AF-A0A6B2Z253-F1-model_v4 Urease accessory protein UreF 0.9805 57 224 GO:0016151
AF-A0A6G2PSH9-F1-model_v4 Urease accessory protein UreF 0.9778 55 224 GO:0016151

Map