F217604

General Info

Members Datasets Scaffolds Average Seq Length
153 88 152 487

Family's Representative Sequence

Representative Sequence 3300039062|Ga0400483_217632|Ga0400483_217632_590_2209
Length 539
Sequence VIDHLSDWRLIDHLLNPFRQQGMVAGLTMCPLDESCPMRIMPRTGKLPYALYRADQVRAFDRVAIEEFDIPGAELMQRAGGCAYQTIKQRWPDVSEIVVVCGMGNNGGDGYVIARLASEDGLRVRVLQLGDARQLKGDARIMAESWMELGHPIEPFEDLGNPDLIVDALLGTGLERDITGSWASAVEQINRHPAPVFAIDIPSGLHADTGRILGCAIEAAVTISFIGLKQGMFTGRGPDCCGEITFDALAIPARIYARQILACRRIDWHKLAAQVKPRRRTAHKGDFGHLLLIAGNRGYPGAARLAAEAAARSGAGLVTLATHPEHAPGLNLGRPELMVRGVSQRQDLTPLLSRADALVVGPGLGQDGWAKMCHQAALESSMPAVVDADSLNLLAEQPQLRNNWILTPHPGEASRLLGCDTASIEGDRFAAVAAIQQRFGGSVILKGAGTLICDRSEQPLALCSDGNPGMATGGMGDLLSGILGSFMAQGYDLRDTAELGVTLHAAAGDRAAALGEIGLLAGDLLPEIRPLLNGDAAGA

Samples

Sample ID Description Type Environment
1 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
26 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
57 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
58 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
59 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
62 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
63 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
64 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
65 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
66 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
67 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
68 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
69 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
70 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
71 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
72 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
73 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
74 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
75 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
76 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
77 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
78 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
79 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
80 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
81 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
82 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
83 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
86 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
87 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
88 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.35
Metatranscriptomes 0
Isolates 0.65

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 3.27
Rhizosphere 64.05
Stem 0
Stem Tuber 0
Unclassified 32.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10082947 3300003323 Bacteria 7220
2 rootH1_10112334 3300003323 Bacteria 3275
3 Ga0070683_100084165 3300005329 Bacteria 2980
4 Ga0068869_100110559 3300005334 Unclassified 2090
5 Ga0068869_100155672 3300005334 Bacteria 1775
6 Ga0068868_100005946 3300005338 Bacteria 8605
7 Ga0070661_100013851 3300005344 Bacteria 5666
8 Ga0070671_100036194 3300005355 Bacteria 4092
9 Ga0070673_100212002 3300005364 Bacteria 1673
10 Ga0070667_100005651 3300005367 Bacteria 10441
11 Ga0070714_100205644 3300005435 Bacteria 1803
12 Ga0070701_10031445 3300005438 Bacteria 2633
13 Ga0070694_100047719 3300005444 Bacteria 2879
14 Ga0070678_100140873 3300005456 Bacteria 1929
15 Ga0070684_100020273 3300005535 Bacteria 5514
16 Ga0070686_100001260 3300005544 Bacteria 14355
17 Ga0070686_100006165 3300005544 Bacteria 6657
18 Ga0070665_100010806 3300005548 Bacteria 9233
19 Ga0070704_100088745 3300005549 Unclassified 2298
20 Ga0070664_100011608 3300005564 Bacteria 7146
21 Ga0070702_100007566 3300005615 Bacteria 5205
22 Ga0068852_100084093 3300005616 Bacteria 2831
23 Ga0068859_100012107 3300005617 Bacteria 8670
24 Ga0068859_100028238 3300005617 Bacteria 5624
25 Ga0068859_100120109 3300005617 Bacteria 2695
26 Ga0068864_100027652 3300005618 Bacteria 4792
27 Ga0068861_100009108 3300005719 Bacteria 6844
28 Ga0068863_100013368 3300005841 Bacteria 7914
29 Ga0068858_100009020 3300005842 Bacteria 9538
30 Ga0068858_100016989 3300005842 Bacteria 6832
31 Ga0068862_100090597 3300005844 Bacteria 2662
32 Ga0075431_100081006 3300006847 Bacteria 3352
33 Ga0068865_100026913 3300006881 Bacteria 3795
34 Ga0075436_100046769 3300006914 Bacteria 2984
35 Ga0097620_100012107 3300006931 Bacteria 8670
36 Ga0097620_100028238 3300006931 Bacteria 5624
37 Ga0097620_100120113 3300006931 Bacteria 2695
38 Ga0105245_10003436 3300009098 Bacteria 14199
39 Ga0105243_10054114 3300009148 Bacteria 3185
40 Ga0105242_10011634 3300009176 Bacteria 6769
41 Ga0105242_10240393 3300009176 Bacteria 1627
42 Ga0105238_10017574 3300009551 Bacteria 7272
43 Ga0105238_10196404 3300009551 Bacteria 1993
44 Ga0105246_10000556 3300011119 Bacteria 20579
45 Ga0157370_10000422 3300013104 Bacteria 53330
46 Ga0157374_10008219 3300013296 Bacteria 8915
47 Ga0157378_10003582 3300013297 Bacteria 13746
48 Ga0163162_10073575 3300013306 Bacteria 3473
49 Ga0157375_10006588 3300013308 Bacteria 10109
50 Ga0157375_10056041 3300013308 Bacteria 3889
51 Ga0163163_10104701 3300014325 Bacteria 2855
52 Ga0163163_10162879 3300014325 Bacteria 2276
53 Ga0207643_10077568 3300025908 Bacteria 1921
54 Ga0207694_10125021 3300025924 Bacteria 2057
55 Ga0207687_10030185 3300025927 Bacteria 3653
56 Ga0207686_10005649 3300025934 Bacteria 6704
57 Ga0207704_10064856 3300025938 Bacteria 2284
58 Ga0207689_10004688 3300025942 Bacteria 12335
59 Ga0207689_10122124 3300025942 Bacteria 2142
60 Ga0207708_10002840 3300026075 Bacteria 12747
61 Ga0207641_10022394 3300026088 Bacteria 5201
62 Ga0207648_10003915 3300026089 Bacteria 15517
63 Ga0207675_100003659 3300026118 Bacteria 14989
64 Ga0207683_10122620 3300026121 Bacteria 2334
65 Ga0268266_10042323 3300028379 Bacteria 3890
66 Ga0268265_10144198 3300028380 Bacteria 1998
67 Ga0268264_10007118 3300028381 Bacteria 9375
68 Ga0268264_10073688 3300028381 Bacteria 2899
69 Ga0265327_10001245 3300031251 Bacteria 33996
70 Ga0307508_10003586 3300031616 Bacteria 15621
71 Ga0316575_10020667 3300031665 Bacteria 2527
72 Ga0316575_10025201 3300031665 Bacteria 2306
73 Ga0316579_10009352 3300031691 Bacteria 4118
74 Ga0316579_10010066 3300031691 Bacteria 3988
75 Ga0316579_10023001 3300031691 Bacteria 2793
76 Ga0316579_10042108 3300031691 Bacteria 2121
77 Ga0265314_10023949 3300031711 Bacteria 4640
78 Ga0316576_10000525 3300031727 Bacteria 17912
79 Ga0316576_10001522 3300031727 Bacteria 12542
80 Ga0316576_10029694 3300031727 Bacteria 3867
81 Ga0316576_10090675 3300031727 Bacteria 2277
82 Ga0316578_10000183 3300031728 Bacteria 17442
83 Ga0316578_10009236 3300031728 Bacteria 5062
84 Ga0307516_10008826 3300031730 Bacteria 11327
85 Ga0316577_10000993 3300031733 Bacteria 12678
86 Ga0316577_10039296 3300031733 Bacteria 2647
87 Ga0316580_10001872 3300032139 Bacteria 5645
88 Ga0316574_0055487 3300035398 Bacteria 2476
89 Ga0316582_0004313 3300036647 Bacteria 7161
90 Ga0316582_0006766 3300036647 Bacteria 6051
91 Ga0316582_0028060 3300036647 Bacteria 3407
92 Ga0316584_0005625 3300036712 Bacteria 8438
93 Ga0316584_0008206 3300036712 Bacteria 7185
94 Ga0316584_0013872 3300036712 Bacteria 5717
95 Ga0400484_29807 3300038725 Bacteria 11396
96 Ga0400484_34686 3300038725 Unclassified 1917
97 Ga0400484_41599 3300038725 Bacteria 6470
98 Ga0400490_00715 3300038726 Bacteria 87348
99 Ga0400490_00856 3300038726 Bacteria 15400
100 Ga0400490_17189 3300038726 Bacteria 35473
101 Ga0400490_34427 3300038726 Bacteria 54087
102 Ga0400490_42608 3300038726 Bacteria 10582
103 Ga0400490_53738 3300038726 Bacteria 57250
104 Ga0400491_16720 3300038727 Unclassified 1874
105 Ga0400491_23741 3300038727 Bacteria 3324
106 Ga0400485_14541 3300038735 Bacteria 3161
107 Ga0400485_15626 3300038735 Bacteria 27235
108 Ga0400485_19863 3300038735 Bacteria 101440
109 Ga0400485_20934 3300038735 Bacteria 8459
110 Ga0400488_14578 3300038741 Bacteria 4035
111 Ga0400488_16473 3300038741 Bacteria 27359
112 Ga0400488_23986 3300038741 Bacteria 2820
113 Ga0400488_45165 3300038741 Bacteria 3256
114 Ga0400488_48089 3300038741 Bacteria 3514
115 Ga0400488_57089 3300038741 Bacteria 4692
116 Ga0400486_04972 3300038742 Bacteria 4647
117 Ga0400486_05873 3300038742 Bacteria 6894
118 Ga0400486_06621 3300038742 Bacteria 22508
119 Ga0400486_10291 3300038742 Bacteria 28199
120 Ga0400486_19188 3300038742 Bacteria 196185
121 Ga0400486_27331 3300038742 Bacteria 23106
122 Ga0400483_016691 3300039062 Bacteria 3316
123 Ga0400483_067844 3300039062 Bacteria 40715
124 Ga0400483_156194 3300039062 Bacteria 24469
125 Ga0400483_160347 3300039062 Bacteria 13083
126 Ga0400483_212544 3300039062 Bacteria 3675
127 Ga0400483_213610 3300039062 Bacteria 5721
128 Ga0400483_217631 3300039062 Bacteria 4453
129 Ga0400483_217632 3300039062 Bacteria 3644
130 Ga0400483_217707 3300039062 Bacteria 5840
131 Ga0400483_220552 3300039062 Bacteria 7814
132 Ga0400483_226305 3300039062 Unclassified 2676
133 Ga0400483_238823 3300039062 Bacteria 17339
134 Ga0400483_262593 3300039062 Bacteria 4488
135 Ga0400489_66287 3300039093 Bacteria 28107
136 Ga0400487_13443 3300039110 Bacteria 12849
137 Ga0400487_35120 3300039110 Bacteria 88723
138 Ga0400487_38000 3300039110 Bacteria 182775
139 Ga0400487_46039 3300039110 Bacteria 2365
140 Ga0400487_54045 3300039110 Bacteria 16615
141 Ga0496101_0061933 3300048904 Bacteria 2719
142 Ga0496108_0053505 3300048911 Bacteria 3386
143 Ga0496112_0078384 3300048915 Bacteria 3267
144 Ga0496113_0075230 3300048916 Bacteria 2577
145 Ga0496114_0000294 3300048917 Bacteria 36628
146 Ga0501040_0000378 3300049576 Bacteria 26184
147 Ga0501040_0086738 3300049576 Bacteria 2173
148 Ga0501042_0001333 3300049578 Bacteria 14415
149 Ga0501047_0076045 3300049581 Bacteria 3231
150 nmdc:mga08x19_38453_c1 3300050514 Bacteria 3040
151 Ga0495601_0072385 3300053077 Bacteria 2202
152 Ga0466962_0034559 3300061719 Bacteria 2420

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005444 Ga0070694_100047719 Ga0070694_1000477194 423
2 3300005844 Ga0068862_100090597 Ga0068862_1000905973 425
3 3300006914 Ga0075436_100046769 Ga0075436_1000467694 425
4 3300028380 Ga0268265_10144198 Ga0268265_101441981 425
5 3300050514 nmdc:mga08x19_38453_c1 nmdc:mga08x19_38453_c1_1554_2945 425
6 3300005334 Ga0068869_100155672 Ga0068869_1001556722 427
7 3300025927 Ga0207687_10030185 Ga0207687_100301852 427
8 3300025942 Ga0207689_10004688 Ga0207689_1000468811 427
9 3300036647 Ga0316582_0006766 Ga0316582_0006766_1685_3199 427
10 3300005438 Ga0070701_10031445 Ga0070701_100314453 428
11 3300005456 Ga0070678_100140873 Ga0070678_1001408732 428
12 3300005544 Ga0070686_100001260 Ga0070686_1000012608 428
13 3300005615 Ga0070702_100007566 Ga0070702_1000075662 428
14 3300005617 Ga0068859_100028238 Ga0068859_1000282385 428
15 3300005719 Ga0068861_100009108 Ga0068861_1000091082 428
16 3300005842 Ga0068858_100009020 Ga0068858_1000090205 428
17 3300006881 Ga0068865_100026913 Ga0068865_1000269131 428
18 3300006931 Ga0097620_100028238 Ga0097620_1000282385 428
19 3300009148 Ga0105243_10054114 Ga0105243_100541145 428
20 3300009176 Ga0105242_10011634 Ga0105242_100116343 428
21 3300013297 Ga0157378_10003582 Ga0157378_1000358210 428
22 3300025908 Ga0207643_10077568 Ga0207643_100775682 428
23 3300025934 Ga0207686_10005649 Ga0207686_100056493 428
24 3300025938 Ga0207704_10064856 Ga0207704_100648561 428
25 3300026075 Ga0207708_10002840 Ga0207708_100028407 428
26 3300026089 Ga0207648_10003915 Ga0207648_100039153 428
27 3300026118 Ga0207675_100003659 Ga0207675_1000036592 428
28 3300026121 Ga0207683_10122620 Ga0207683_101226202 428
29 3300028381 Ga0268264_10073688 Ga0268264_100736884 428
30 3300038726 Ga0400490_00715 Ga0400490_00715_51776_53119 431
31 3300005435 Ga0070714_100205644 Ga0070714_1002056442 435
32 3300013308 Ga0157375_10056041 Ga0157375_100560411 438
33 3300014325 Ga0163163_10162879 Ga0163163_101628791 438
34 3300031251 Ga0265327_10001245 Ga0265327_100012456 441
35 3300006847 Ga0075431_100081006 Ga0075431_1000810062 446
36 3300009551 Ga0105238_10196404 Ga0105238_101964042 447
37 3300013104 Ga0157370_10000422 Ga0157370_1000042243 447
38 3300025924 Ga0207694_10125021 Ga0207694_101250212 447
39 3300048904 Ga0496101_0061933 Ga0496101_0061933_427_1935 447
40 3300048917 Ga0496114_0000294 Ga0496114_0000294_26608_28116 447
41 3300038735 Ga0400485_20934 Ga0400485_20934_3050_4546 449
42 3300038741 Ga0400488_57089 Ga0400488_57089_1322_2818 449
43 3300038742 Ga0400486_06621 Ga0400486_06621_17581_19077 449
44 3300039093 Ga0400489_66287 Ga0400489_66287_21005_22501 449
45 3300039110 Ga0400487_54045 Ga0400487_54045_5232_6734 454
46 3300038726 Ga0400490_53738 Ga0400490_53738_17738_19234 457
47 3300005329 Ga0070683_100084165 Ga0070683_1000841653 461
48 3300005338 Ga0068868_100005946 Ga0068868_1000059463 461
49 3300005364 Ga0070673_100212002 Ga0070673_1002120022 461
50 3300005367 Ga0070667_100005651 Ga0070667_1000056518 461
51 3300005535 Ga0070684_100020273 Ga0070684_1000202735 461
52 3300005544 Ga0070686_100006165 Ga0070686_1000061654 461
53 3300005564 Ga0070664_100011608 Ga0070664_1000116085 461
54 3300005616 Ga0068852_100084093 Ga0068852_1000840932 461
55 3300005617 Ga0068859_100012107 Ga0068859_1000121077 461
56 3300005618 Ga0068864_100027652 Ga0068864_1000276524 461
57 3300005842 Ga0068858_100016989 Ga0068858_1000169894 461
58 3300006931 Ga0097620_100012107 Ga0097620_1000121077 461
59 3300009551 Ga0105238_10017574 Ga0105238_100175741 461
60 3300011119 Ga0105246_10000556 Ga0105246_1000055614 461
61 3300013308 Ga0157375_10006588 Ga0157375_100065884 461
62 3300048911 Ga0496108_0053505 Ga0496108_0053505_699_2207 461
63 3300048915 Ga0496112_0078384 Ga0496112_0078384_207_1715 461
64 3300048916 Ga0496113_0075230 Ga0496113_0075230_62_1570 461
65 3300031711 Ga0265314_10023949 Ga0265314_100239492 463
66 3300031727 Ga0316576_10000525 Ga0316576_1000052514 463
67 3300038735 Ga0400485_14541 Ga0400485_14541_592_2088 466
68 3300038742 Ga0400486_04972 Ga0400486_04972_1377_2873 466
69 3300053077 Ga0495601_0072385 Ga0495601_0072385_41_1546 467
70 3300038726 Ga0400490_34427 Ga0400490_34427_47261_48757 471
71 3300038726 Ga0400490_42608 Ga0400490_42608_1832_3328 471
72 3300038741 Ga0400488_48089 Ga0400488_48089_790_2286 471
73 3300039062 Ga0400483_067844 Ga0400483_067844_15510_17006 471
74 3300039062 Ga0400483_156194 Ga0400483_156194_15258_16730 471
75 3300039110 Ga0400487_13443 Ga0400487_13443_9084_10580 471
76 3300049576 Ga0501040_0000378 Ga0501040_0000378_4564_6045 471
77 3300049578 Ga0501042_0001333 Ga0501042_0001333_4735_6216 471
78 iso_pu_bacteria 2565956521 2566036127 471
79 3300049576 Ga0501040_0086738 Ga0501040_0086738_438_1919 472
80 3300005334 Ga0068869_100110559 Ga0068869_1001105592 474
81 3300005549 Ga0070704_100088745 Ga0070704_1000887452 474
82 3300025942 Ga0207689_10122124 Ga0207689_101221242 474
83 3300031733 Ga0316577_10039296 Ga0316577_100392963 474
84 3300005344 Ga0070661_100013851 Ga0070661_1000138515 475
85 3300005355 Ga0070671_100036194 Ga0070671_1000361944 475
86 3300005548 Ga0070665_100010806 Ga0070665_1000108067 475
87 3300005841 Ga0068863_100013368 Ga0068863_1000133684 475
88 3300009098 Ga0105245_10003436 Ga0105245_1000343610 475
89 3300009176 Ga0105242_10240393 Ga0105242_102403931 475
90 3300013296 Ga0157374_10008219 Ga0157374_100082192 475
91 3300013306 Ga0163162_10073575 Ga0163162_100735753 475
92 3300014325 Ga0163163_10104701 Ga0163163_101047012 475
93 3300026088 Ga0207641_10022394 Ga0207641_100223944 475
94 3300028379 Ga0268266_10042323 Ga0268266_100423233 475
95 3300028381 Ga0268264_10007118 Ga0268264_100071188 475
96 3300031665 Ga0316575_10020667 Ga0316575_100206672 475
97 3300031691 Ga0316579_10009352 Ga0316579_100093523 476
98 3300031691 Ga0316579_10010066 Ga0316579_100100662 476
99 3300038725 Ga0400484_29807 Ga0400484_29807_735_2243 476
100 3300038726 Ga0400490_00856 Ga0400490_00856_4867_6366 476
101 3300038727 Ga0400491_16720 Ga0400491_16720_11_1519 476
102 3300038735 Ga0400485_15626 Ga0400485_15626_20115_21623 476
103 3300038741 Ga0400488_23986 Ga0400488_23986_80_1594 476
104 3300038742 Ga0400486_05873 Ga0400486_05873_2648_4174 476
105 3300038742 Ga0400486_10291 Ga0400486_10291_5218_6744 476
106 3300038742 Ga0400486_27331 Ga0400486_27331_5627_7135 476
107 3300039062 Ga0400483_016691 Ga0400483_016691_1553_3079 476
108 3300039062 Ga0400483_217631 Ga0400483_217631_2338_3864 476
109 3300039062 Ga0400483_217632 Ga0400483_217632_590_2209 476
110 3300039062 Ga0400483_217707 Ga0400483_217707_495_2012 476
111 3300039062 Ga0400483_220552 Ga0400483_220552_1353_2861 476
112 3300039110 Ga0400487_46039 Ga0400487_46039_64_1572 476
113 3300031691 Ga0316579_10023001 Ga0316579_100230012 477
114 3300031691 Ga0316579_10042108 Ga0316579_100421082 477
115 3300031727 Ga0316576_10001522 Ga0316576_100015224 477
116 3300031727 Ga0316576_10029694 Ga0316576_100296942 477
117 3300031727 Ga0316576_10090675 Ga0316576_100906752 477
118 3300031728 Ga0316578_10000183 Ga0316578_100001833 477
119 3300031728 Ga0316578_10009236 Ga0316578_100092362 477
120 3300031733 Ga0316577_10000993 Ga0316577_100009934 477
121 3300032139 Ga0316580_10001872 Ga0316580_100018725 477
122 3300035398 Ga0316574_0055487 Ga0316574_0055487_899_2422 477
123 3300036647 Ga0316582_0004313 Ga0316582_0004313_689_2194 477
124 3300036647 Ga0316582_0028060 Ga0316582_0028060_1010_2533 477
125 3300036712 Ga0316584_0005625 Ga0316584_0005625_2140_3663 477
126 3300036712 Ga0316584_0008206 Ga0316584_0008206_1311_2816 477
127 3300036712 Ga0316584_0013872 Ga0316584_0013872_2556_4079 477
128 3300038725 Ga0400484_34686 Ga0400484_34686_226_1737 477
129 3300038725 Ga0400484_41599 Ga0400484_41599_4215_5717 477
130 3300038726 Ga0400490_17189 Ga0400490_17189_7052_8563 477
131 3300038727 Ga0400491_23741 Ga0400491_23741_709_2220 477
132 3300038735 Ga0400485_19863 Ga0400485_19863_65425_66948 477
133 3300038741 Ga0400488_14578 Ga0400488_14578_44_1546 477
134 3300038741 Ga0400488_16473 Ga0400488_16473_3752_5275 477
135 3300038741 Ga0400488_45165 Ga0400488_45165_215_1717 477
136 3300038742 Ga0400486_19188 Ga0400486_19188_158478_160001 477
137 3300039062 Ga0400483_160347 Ga0400483_160347_5417_6919 477
138 3300039062 Ga0400483_212544 Ga0400483_212544_347_1858 477
139 3300039062 Ga0400483_213610 Ga0400483_213610_2312_3823 477
140 3300039062 Ga0400483_226305 Ga0400483_226305_1122_2624 477
141 3300039062 Ga0400483_238823 Ga0400483_238823_2059_3561 477
142 3300039062 Ga0400483_262593 Ga0400483_262593_1802_3304 477
143 3300039110 Ga0400487_35120 Ga0400487_35120_35574_37097 477
144 3300039110 Ga0400487_38000 Ga0400487_38000_30477_31979 477
145 3300031665 Ga0316575_10025201 Ga0316575_100252013 478
146 3300003323 rootH1_10112334 rootH1_101123343 484
147 3300061719 Ga0466962_0034559 Ga0466962_0034559_716_2248 487
148 3300031616 Ga0307508_10003586 Ga0307508_100035868 490
149 3300031730 Ga0307516_10008826 Ga0307516_1000882611 490
150 3300049581 Ga0501047_0076045 Ga0501047_0076045_1247_2797 492
151 3300005617 Ga0068859_100120109 Ga0068859_1001201092 494
152 3300006931 Ga0097620_100120113 Ga0097620_1001201132 494
153 3300003323 rootH1_10082947 rootH1_100829472 496

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01256

Carb_kinase

Carbohydrate kinase

290

530

0.96

PF03853

YjeF_N

YjeF-related protein N-terminus

72

231

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rss-assembly1.cif.gz_A crystal structure of tm0922, a fusion of a domain of unknown function and adp/atp-dependent nad(p)h-hydrate dehydratase from thermotoga maritima soaked with nadp 0.9026 10 491
2r3b-assembly1.cif.gz_B crystal structure of a ribokinase-like superfamily protein (ef1790) from enterococcus faecalis v583 at 1.80 a resolution 0.8912 212 491
3rss-assembly1.cif.gz_A crystal structure of tm0922, a fusion of a domain of unknown function and adp/atp-dependent nad(p)h-hydrate dehydratase from thermotoga maritima soaked with nadp 0.8799 10 491
3rq5-assembly1.cif.gz_A crystal structure of adp/atp-dependent nad(p)h-hydrate dehydratase from bacillus subtilis co-crystallized with atp/mg2+ and soaked with coa 0.8751 211 491
3bgk-assembly1.cif.gz_A the crystal structure of hypothetic protein smu.573 from streptococcus mutans 0.875 212 492
ID Description Score Start End Superfamily
af_P31806_227_500_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9542 212 488 3.40.1190.20
af_P31806_227_500_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9306 212 488 3.40.1190.20
af_A4HW65_253_553_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9284 224 488 3.40.1190.20
af_Q4DA84_248_552_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9083 212 488 3.40.1190.20
2ax3A02 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9083 212 491 3.40.1190.20
ID Description Score Start End GO Terms
AF-A0A0B8P2U5-F1-model_v4 NAD(P)HX epimerase 0.9744 133 202
AF-A0A1G0X1U5-F1-model_v4 ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) (ADP-dependent NAD(P)HX dehydratase) 0.9547 210 488 GO:0005524
GO:0046496
GO:0052855
GO:0052856
GO:0110051
AF-A0A3A4P0C4-F1-model_v4 ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) (ADP-dependent NAD(P)HX dehydratase) 0.9533 212 491 GO:0005524
GO:0046496
GO:0052855
GO:0052856
GO:0110051
AF-A0A6L4YA97-F1-model_v4 Carbohydrate kinase 0.9511 242 491 GO:0005524
GO:0016301
GO:0052855
GO:0052856
GO:0110051
AF-A0A509L0F0-F1-model_v4 Bifunctional NAD(P)H-hydrate repair enzyme Nnr (EC 4.2.1.136) (EC 5.1.99.6) (Nicotinamide nucleotide repair protein) 0.9496 4 485 GO:0005524
GO:0046872
GO:0052855
GO:0052856
GO:0110051

Feature Viewer

pLDDT pTM Quality
90.42 0.91 High
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Predicted Structure (AlphaFold2)

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