F216490

General Info

Members Datasets Scaffolds Average Seq Length
153 84 153 247

Family's Representative Sequence

Representative Sequence 3300005614|Ga0068856_100426683|Ga0068856_1004266832
Length 270
Sequence MVADTSKAFTWVQRNFSALPPTPPTARLRRVSNEFYAPGDQRAAKVNDLFARIARRYDFLNDLQSFGLHRSWKRQVVDLAQIKPGSKALDLCCGTGDITFALAKRGADATGLDFSPQMLEVAAQRQLAGAKAPNLRFIQGDAQELPYPENSFDVVTVGYGLRNLTSWERGVDEMYRVAKPGARLIVLDFGKPPNALWRTIYFTHLQLSVPLIGLLFCGNAQAYAYILESLKHYPAQLAVADKMRALNLKDVRVINLLGGAMAINYGVKAE

Samples

Sample ID Description Type Environment
1 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
7 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
8 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
11 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
12 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
13 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
14 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
15 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
16 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
17 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
18 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
25 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
26 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
27 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
28 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
29 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
30 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
31 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
32 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
33 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
34 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
35 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
36 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
37 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
38 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
39 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
40 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
41 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
42 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
43 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
44 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
45 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
46 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
47 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
48 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
49 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
50 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
51 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
52 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
53 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
54 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
55 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
56 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
57 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
58 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
59 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
60 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
61 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
62 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
63 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
64 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
65 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
66 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
67 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
68 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
69 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
70 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
71 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
72 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
74 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
75 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
81 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
83 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
84 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.65
Nodule 0
Rhizoplane 0
Rhizosphere 98.69
Stem 0
Stem Tuber 0
Unclassified 0.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10122370 3300003322 Bacteria 1236
2 Ga0070658_10068958 3300005327 Bacteria 2892
3 Ga0070690_100025357 3300005330 Bacteria 3652
4 Ga0070713_100517524 3300005436 Unclassified 1127
5 Ga0070711_100001813 3300005439 Bacteria 11911
6 Ga0070711_100121062 3300005439 Unclassified 1935
7 Ga0070711_100184688 3300005439 Unclassified 1598
8 Ga0070684_100622138 3300005535 Unclassified 1004
9 Ga0068855_100076682 3300005563 Bacteria 3879
10 Ga0068855_100179869 3300005563 Bacteria 2391
11 Ga0068857_100003916 3300005577 Bacteria 12530
12 Ga0068856_100000017 3300005614 Bacteria 154589
13 Ga0068856_100426683 3300005614 Bacteria 1346
14 Ga0068859_100286529 3300005617 Unclassified 1740
15 Ga0068859_100612232 3300005617 Unclassified 1182
16 Ga0068863_100196053 3300005841 Bacteria 1941
17 Ga0075434_100372305 3300006871 Bacteria 1449
18 Ga0097620_100286541 3300006931 Unclassified 1740
19 Ga0097620_100612195 3300006931 Unclassified 1182
20 Ga0105237_10239933 3300009545 Unclassified 1814
21 Ga0105238_10113127 3300009551 Unclassified 2694
22 Ga0105238_10198119 3300009551 Bacteria 1984
23 Ga0163163_10000060 3300014325 Bacteria 121560
24 Ga0163163_10340244 3300014325 Bacteria 1555
25 Ga0163161_10425661 3300017792 Bacteria 1069
26 Ga0207663_10036044 3300025916 Unclassified 2973
27 Ga0207694_10190246 3300025924 Bacteria 1667
28 Ga0207694_10239385 3300025924 Unclassified 1483
29 Ga0207667_10102109 3300025949 Bacteria 2958
30 Ga0207702_10000781 3300026078 Bacteria 33694
31 Ga0207702_10416221 3300026078 Bacteria 1299
32 Ga0207641_10393062 3300026088 Bacteria 1330
33 Ga0207674_10013235 3300026116 Bacteria 9169
34 Ga0265337_1000140 3300028556 Bacteria 36107
35 Ga0265337_1013417 3300028556 Bacteria 2749
36 Ga0265337_1013788 3300028556 Bacteria 2699
37 Ga0265337_1036845 3300028556 Bacteria 1425
38 Ga0265337_1037959 3300028556 Bacteria 1398
39 Ga0265337_1054678 3300028556 Bacteria 1116
40 Ga0265337_1062023 3300028556 Unclassified 1035
41 Ga0265326_10041198 3300028558 Bacteria 1311
42 Ga0265319_1000007 3300028563 Bacteria 217194
43 Ga0265319_1009171 3300028563 Bacteria 4243
44 Ga0265319_1032114 3300028563 Bacteria 1823
45 Ga0265334_10026962 3300028573 Unclassified 2316
46 Ga0265334_10038862 3300028573 Unclassified 1870
47 Ga0265318_10123530 3300028577 Bacteria 952
48 Ga0265323_10001128 3300028653 Bacteria 13760
49 Ga0265323_10012219 3300028653 Unclassified 3449
50 Ga0265323_10017882 3300028653 Bacteria 2749
51 Ga0265336_10000819 3300028666 Bacteria 16328
52 Ga0265336_10015744 3300028666 Bacteria 2482
53 Ga0265336_10019941 3300028666 Bacteria 2158
54 Ga0265338_10000096 3300028800 Bacteria 164859
55 Ga0265338_10001555 3300028800 Bacteria 37061
56 Ga0265338_10003837 3300028800 Bacteria 20878
57 Ga0265338_10006553 3300028800 Bacteria 14786
58 Ga0265338_10011606 3300028800 Bacteria 10153
59 Ga0265338_10012740 3300028800 Bacteria 9565
60 Ga0265338_10020922 3300028800 Bacteria 6848
61 Ga0265338_10047547 3300028800 Bacteria 3917
62 Ga0265338_10050402 3300028800 Bacteria 3764
63 Ga0265338_10109893 3300028800 Bacteria 2223
64 Ga0265338_10303581 3300028800 Unclassified 1160
65 Ga0265338_10399564 3300028800 Unclassified 980
66 Ga0265324_10000170 3300029957 Bacteria 50529
67 Ga0265324_10005600 3300029957 Bacteria 5392
68 Ga0265324_10011565 3300029957 Bacteria 3360
69 Ga0265324_10048034 3300029957 Bacteria 1468
70 Ga0265324_10068358 3300029957 Unclassified 1211
71 Ga0265324_10078487 3300029957 Unclassified 1123
72 Ga0265324_10090381 3300029957 Bacteria 1041
73 Ga0265320_10000585 3300031240 Bacteria 28024
74 Ga0265320_10017589 3300031240 Unclassified 3963
75 Ga0265320_10154833 3300031240 Unclassified 1034
76 Ga0265325_10017124 3300031241 Bacteria 4033
77 Ga0265325_10152577 3300031241 Bacteria 1091
78 Ga0265325_10188598 3300031241 Bacteria 956
79 Ga0265340_10013894 3300031247 Bacteria 4219
80 Ga0265340_10036917 3300031247 Bacteria 2421
81 Ga0265339_10012388 3300031249 Bacteria 5210
82 Ga0265331_10015402 3300031250 Unclassified 4038
83 Ga0265327_10010103 3300031251 Bacteria 6691
84 Ga0265327_10010874 3300031251 Bacteria 6339
85 Ga0265327_10099483 3300031251 Bacteria 1405
86 Ga0265316_10019839 3300031344 Bacteria 5739
87 Ga0265316_10021234 3300031344 Bacteria 5506
88 Ga0265316_10118092 3300031344 Bacteria 2004
89 Ga0265316_10123576 3300031344 Unclassified 1953
90 Ga0265316_10254938 3300031344 Bacteria 1287
91 Ga0265313_10006728 3300031595 Bacteria 8040
92 Ga0265313_10007547 3300031595 Bacteria 7394
93 Ga0265314_10004107 3300031711 Bacteria 13720
94 Ga0265314_10121923 3300031711 Unclassified 1640
95 Ga0265342_10037542 3300031712 Unclassified 2953
96 Ga0373930_0008256 3300034816 Bacteria 1819
97 Ga0373928_0000744 3300035084 Bacteria 6384
98 Ga0373929_0000182 3300035085 Bacteria 11124
99 Ga0373944_0000299 3300035089 Bacteria 11012
100 Ga0373949_0026596 3300035090 Bacteria 1356
101 Ga0373951_0000291 3300035091 Bacteria 16016
102 Ga0373951_0020038 3300035091 Bacteria 1529
103 Ga0373932_0000001 3300035112 Bacteria 1459067
104 Ga0373936_0125308 3300035113 Unclassified 1100
105 Ga0373943_0022634 3300035170 Unclassified 2915
106 Ga0373962_0000033 3300035242 Bacteria 33867
107 Ga0373931_0000002 3300035691 Bacteria 599830
108 Ga0373935_0002593 3300035692 Bacteria 10383
109 Ga0373935_0407326 3300035692 Unclassified 977
110 Ga0373927_0002578 3300035695 Bacteria 13222
111 Ga0373927_0006462 3300035695 Bacteria 7984
112 Ga0373927_0018247 3300035695 Bacteria 4612
113 Ga0373927_0041808 3300035695 Unclassified 2972
114 Ga0373947_0015013 3300035725 Bacteria 4446
115 Ga0373937_0012068 3300036401 Bacteria 7584
116 Ga0373937_0362304 3300036401 Bacteria 1374
117 Ga0373925_0000215 3300037068 Bacteria 62800
118 Ga0373925_0001014 3300037068 Bacteria 25413
119 Ga0373925_0715521 3300037068 Bacteria 825
120 Ga0453684_0078093 3300044712 Bacteria 4145
121 Ga0451576_0102483 3300045051 Bacteria 2978
122 Ga0495629_0243178 3300046459 Unclassified 1239
123 Ga0495618_0002646 3300046514 Bacteria 11456
124 Ga0495628_0213930 3300046516 Bacteria 1449
125 Ga0495630_0121407 3300046517 Bacteria 1982
126 Ga0495630_0150195 3300046517 Bacteria 1772
127 Ga0495630_0164069 3300046517 Unclassified 1691
128 Ga0495586_0002311 3300046535 Bacteria 10358
129 Ga0495586_0130618 3300046535 Bacteria 1406
130 Ga0495622_0127034 3300046557 Unclassified 1162
131 Ga0495667_0007755 3300046559 Bacteria 7273
132 Ga0495634_0002060 3300046642 Bacteria 17002
133 Ga0495634_0267458 3300046642 Bacteria 1041
134 Ga0495657_0130884 3300046675 Bacteria 1572
135 Ga0495613_0077775 3300046689 Unclassified 2413
136 Ga0495684_0412981 3300047471 Bacteria 945
137 Ga0501031_0000211 3300049568 Bacteria 33324
138 Ga0501032_0027243 3300049569 Bacteria 3928
139 Ga0501033_0001416 3300049570 Bacteria 21301
140 Ga0501036_0130618 3300049572 Bacteria 2121
141 Ga0501037_0080254 3300049573 Bacteria 2368
142 Ga0501038_0214143 3300049574 Archaea 1540
143 Ga0501038_0337384 3300049574 Unclassified 1176
144 Ga0501043_0021626 3300049579 Bacteria 5043
145 Ga0501047_0382336 3300049581 Bacteria 1242
146 Ga0501080_0025604 3300049742 Bacteria 5478
147 Ga0501035_0026020 3300049822 Bacteria 5359
148 Ga0501035_0029918 3300049822 Bacteria 4967
149 Ga0501035_0179687 3300049822 Bacteria 1823
150 Ga0501044_0004765 3300049823 Bacteria 15175
151 Ga0501044_0196651 3300049823 Bacteria 1976
152 nmdc:mga0n895_602459_c1 3300050512 Bacteria 1101
153 Ga0500650_0006633 3300053098 Bacteria 4440

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046689 Ga0495613_0077775 Ga0495613_0077775_17_607 195
2 3300047471 Ga0495684_0412981 Ga0495684_0412981_318_908 195
3 3300028653 Ga0265323_10017882 Ga0265323_100178822 225
4 3300045051 Ga0451576_0102483 Ga0451576_0102483_1751_2461 234
5 3300028800 Ga0265338_10003837 Ga0265338_1000383713 237
6 3300031251 Ga0265327_10010874 Ga0265327_100108744 237
7 3300044712 Ga0453684_0078093 Ga0453684_0078093_2658_3374 238
8 3300028558 Ga0265326_10041198 Ga0265326_100411981 239
9 3300028666 Ga0265336_10015744 Ga0265336_100157442 239
10 3300029957 Ga0265324_10000170 Ga0265324_1000017030 239
11 3300031241 Ga0265325_10017124 Ga0265325_100171241 239
12 3300031344 Ga0265316_10118092 Ga0265316_101180923 239
13 3300005439 Ga0070711_100121062 Ga0070711_1001210622 240
14 3300005577 Ga0068857_100003916 Ga0068857_1000039166 240
15 3300005614 Ga0068856_100426683 Ga0068856_1004266832 240
16 3300005617 Ga0068859_100612232 Ga0068859_1006122322 240
17 3300006931 Ga0097620_100612195 Ga0097620_1006121952 240
18 3300009545 Ga0105237_10239933 Ga0105237_102399332 240
19 3300009551 Ga0105238_10113127 Ga0105238_101131272 240
20 3300025924 Ga0207694_10190246 Ga0207694_101902462 240
21 3300026078 Ga0207702_10416221 Ga0207702_104162212 240
22 3300026116 Ga0207674_10013235 Ga0207674_1001323511 240
23 3300028556 Ga0265337_1013417 Ga0265337_10134174 240
24 3300028556 Ga0265337_1013788 Ga0265337_10137881 240
25 3300028666 Ga0265336_10019941 Ga0265336_100199414 240
26 3300031240 Ga0265320_10000585 Ga0265320_1000058520 240
27 3300035091 Ga0373951_0020038 Ga0373951_0020038_658_1410 240
28 3300035695 Ga0373927_0006462 Ga0373927_0006462_262_987 240
29 3300037068 Ga0373925_0715521 Ga0373925_0715521_89_814 240
30 3300005327 Ga0070658_10068958 Ga0070658_100689583 241
31 3300005330 Ga0070690_100025357 Ga0070690_1000253573 241
32 3300005535 Ga0070684_100622138 Ga0070684_1006221381 241
33 3300005563 Ga0068855_100076682 Ga0068855_1000766825 241
34 3300005563 Ga0068855_100179869 Ga0068855_1001798691 241
35 3300005614 Ga0068856_100000017 Ga0068856_10000001729 241
36 3300005841 Ga0068863_100196053 Ga0068863_1001960531 241
37 3300009551 Ga0105238_10198119 Ga0105238_101981192 241
38 3300014325 Ga0163163_10340244 Ga0163163_103402442 241
39 3300025924 Ga0207694_10239385 Ga0207694_102393852 241
40 3300025949 Ga0207667_10102109 Ga0207667_101021093 241
41 3300026078 Ga0207702_10000781 Ga0207702_1000078117 241
42 3300026088 Ga0207641_10393062 Ga0207641_103930621 241
43 3300028556 Ga0265337_1000140 Ga0265337_100014036 241
44 3300028556 Ga0265337_1036845 Ga0265337_10368452 241
45 3300028556 Ga0265337_1037959 Ga0265337_10379592 241
46 3300028556 Ga0265337_1054678 Ga0265337_10546782 241
47 3300028556 Ga0265337_1062023 Ga0265337_10620232 241
48 3300028563 Ga0265319_1000007 Ga0265319_100000784 241
49 3300028563 Ga0265319_1009171 Ga0265319_10091716 241
50 3300028563 Ga0265319_1032114 Ga0265319_10321142 241
51 3300028573 Ga0265334_10026962 Ga0265334_100269623 241
52 3300028573 Ga0265334_10038862 Ga0265334_100388622 241
53 3300028577 Ga0265318_10123530 Ga0265318_101235301 241
54 3300028653 Ga0265323_10001128 Ga0265323_100011288 241
55 3300028653 Ga0265323_10012219 Ga0265323_100122197 241
56 3300028666 Ga0265336_10000819 Ga0265336_1000081920 241
57 3300028800 Ga0265338_10000096 Ga0265338_1000009663 241
58 3300028800 Ga0265338_10001555 Ga0265338_100015552 241
59 3300028800 Ga0265338_10006553 Ga0265338_100065539 241
60 3300028800 Ga0265338_10011606 Ga0265338_100116069 241
61 3300028800 Ga0265338_10012740 Ga0265338_100127405 241
62 3300028800 Ga0265338_10020922 Ga0265338_100209222 241
63 3300028800 Ga0265338_10047547 Ga0265338_100475474 241
64 3300028800 Ga0265338_10050402 Ga0265338_100504024 241
65 3300028800 Ga0265338_10303581 Ga0265338_103035812 241
66 3300029957 Ga0265324_10005600 Ga0265324_100056008 241
67 3300029957 Ga0265324_10011565 Ga0265324_100115653 241
68 3300029957 Ga0265324_10048034 Ga0265324_100480341 241
69 3300029957 Ga0265324_10068358 Ga0265324_100683582 241
70 3300029957 Ga0265324_10078487 Ga0265324_100784872 241
71 3300029957 Ga0265324_10090381 Ga0265324_100903811 241
72 3300031240 Ga0265320_10017589 Ga0265320_100175891 241
73 3300031240 Ga0265320_10154833 Ga0265320_101548331 241
74 3300031241 Ga0265325_10152577 Ga0265325_101525771 241
75 3300031241 Ga0265325_10188598 Ga0265325_101885981 241
76 3300031247 Ga0265340_10036917 Ga0265340_100369173 241
77 3300031249 Ga0265339_10012388 Ga0265339_100123884 241
78 3300031250 Ga0265331_10015402 Ga0265331_100154022 241
79 3300031251 Ga0265327_10010103 Ga0265327_100101038 241
80 3300031251 Ga0265327_10099483 Ga0265327_100994832 241
81 3300031344 Ga0265316_10019839 Ga0265316_100198393 241
82 3300031344 Ga0265316_10021234 Ga0265316_100212349 241
83 3300031344 Ga0265316_10123576 Ga0265316_101235762 241
84 3300031344 Ga0265316_10254938 Ga0265316_102549381 241
85 3300031595 Ga0265313_10006728 Ga0265313_100067288 241
86 3300031595 Ga0265313_10007547 Ga0265313_100075474 241
87 3300031711 Ga0265314_10004107 Ga0265314_100041073 241
88 3300031711 Ga0265314_10121923 Ga0265314_101219232 241
89 3300031712 Ga0265342_10037542 Ga0265342_100375426 241
90 3300034816 Ga0373930_0008256 Ga0373930_0008256_317_1075 241
91 3300035084 Ga0373928_0000744 Ga0373928_0000744_3706_4464 241
92 3300035085 Ga0373929_0000182 Ga0373929_0000182_10040_10798 241
93 3300035089 Ga0373944_0000299 Ga0373944_0000299_6770_7528 241
94 3300035090 Ga0373949_0026596 Ga0373949_0026596_58_816 241
95 3300035091 Ga0373951_0000291 Ga0373951_0000291_10686_11444 241
96 3300035112 Ga0373932_0000001 Ga0373932_0000001_1337986_1338744 241
97 3300035242 Ga0373962_0000033 Ga0373962_0000033_8100_8858 241
98 3300035691 Ga0373931_0000002 Ga0373931_0000002_156654_157412 241
99 3300035692 Ga0373935_0407326 Ga0373935_0407326_166_924 241
100 3300035695 Ga0373927_0018247 Ga0373927_0018247_3530_4288 241
101 3300035695 Ga0373927_0041808 Ga0373927_0041808_2156_2914 241
102 3300035725 Ga0373947_0015013 Ga0373947_0015013_1312_2070 241
103 3300036401 Ga0373937_0012068 Ga0373937_0012068_60_794 241
104 3300036401 Ga0373937_0362304 Ga0373937_0362304_394_1125 241
105 3300037068 Ga0373925_0000215 Ga0373925_0000215_55176_55934 241
106 3300046459 Ga0495629_0243178 Ga0495629_0243178_335_1069 241
107 3300046514 Ga0495618_0002646 Ga0495618_0002646_363_1097 241
108 3300046516 Ga0495628_0213930 Ga0495628_0213930_260_994 241
109 3300046517 Ga0495630_0121407 Ga0495630_0121407_740_1471 241
110 3300046517 Ga0495630_0164069 Ga0495630_0164069_35_769 241
111 3300046535 Ga0495586_0002311 Ga0495586_0002311_9303_10037 241
112 3300046535 Ga0495586_0130618 Ga0495586_0130618_15_746 241
113 3300046557 Ga0495622_0127034 Ga0495622_0127034_287_1027 241
114 3300046559 Ga0495667_0007755 Ga0495667_0007755_1058_1789 241
115 3300046642 Ga0495634_0002060 Ga0495634_0002060_15138_15872 241
116 3300046642 Ga0495634_0267458 Ga0495634_0267458_285_1013 241
117 3300046675 Ga0495657_0130884 Ga0495657_0130884_386_1117 241
118 3300049568 Ga0501031_0000211 Ga0501031_0000211_26271_26999 241
119 3300049569 Ga0501032_0027243 Ga0501032_0027243_1527_2255 241
120 3300049570 Ga0501033_0001416 Ga0501033_0001416_19858_20586 241
121 3300049572 Ga0501036_0130618 Ga0501036_0130618_1280_2008 241
122 3300049573 Ga0501037_0080254 Ga0501037_0080254_163_891 241
123 3300049574 Ga0501038_0214143 Ga0501038_0214143_497_1225 241
124 3300049574 Ga0501038_0337384 Ga0501038_0337384_62_793 241
125 3300049579 Ga0501043_0021626 Ga0501043_0021626_3854_4585 241
126 3300049581 Ga0501047_0382336 Ga0501047_0382336_163_894 241
127 3300049742 Ga0501080_0025604 Ga0501080_0025604_4703_5431 241
128 3300049822 Ga0501035_0026020 Ga0501035_0026020_3637_4365 241
129 3300049822 Ga0501035_0029918 Ga0501035_0029918_1015_1743 241
130 3300049822 Ga0501035_0179687 Ga0501035_0179687_66_797 241
131 3300049823 Ga0501044_0004765 Ga0501044_0004765_11282_12010 241
132 3300049823 Ga0501044_0196651 Ga0501044_0196651_737_1465 241
133 3300053098 Ga0500650_0006633 Ga0500650_0006633_1354_2088 241
134 3300003322 rootL2_10122370 rootL2_101223701 242
135 3300005436 Ga0070713_100517524 Ga0070713_1005175242 242
136 3300005439 Ga0070711_100001813 Ga0070711_10000181311 242
137 3300005439 Ga0070711_100184688 Ga0070711_1001846882 242
138 3300005617 Ga0068859_100286529 Ga0068859_1002865292 242
139 3300006871 Ga0075434_100372305 Ga0075434_1003723052 242
140 3300006931 Ga0097620_100286541 Ga0097620_1002865412 242
141 3300014325 Ga0163163_10000060 Ga0163163_1000006083 242
142 3300017792 Ga0163161_10425661 Ga0163161_104256612 242
143 3300025916 Ga0207663_10036044 Ga0207663_100360444 242
144 3300028800 Ga0265338_10109893 Ga0265338_101098932 242
145 3300028800 Ga0265338_10399564 Ga0265338_103995642 242
146 3300031247 Ga0265340_10013894 Ga0265340_100138945 242
147 3300035113 Ga0373936_0125308 Ga0373936_0125308_37_822 242
148 3300035170 Ga0373943_0022634 Ga0373943_0022634_1175_1942 242
149 3300035692 Ga0373935_0002593 Ga0373935_0002593_1172_1939 242
150 3300035695 Ga0373927_0002578 Ga0373927_0002578_3493_4278 242
151 3300037068 Ga0373925_0001014 Ga0373925_0001014_12590_13375 242
152 3300046517 Ga0495630_0150195 Ga0495630_0150195_256_1023 242
153 3300050512 nmdc:mga0n895_602459_c1 nmdc:mga0n895_602459_c1_305_1087 242

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01209

Ubie_methyltran

ubiE/COQ5 methyltransferase family

39

268

0.97

PF08241

Methyltransf_11

Methyltransferase domain

89

186

0.93

PF13847

Methyltransf_31

Methyltransferase domain

82

224

0.92

PF13489

Methyltransf_23

Methyltransferase domain

65

211

0.91

PF08242

Methyltransf_12

Methyltransferase domain

89

184

0.9

PF13649

Methyltransf_25

Methyltransferase domain

88

181

0.9

PF07021

MetW

Methionine biosynthesis protein MetW

73

205

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
4obx-assembly1.cif.gz_B crystal structure of yeast coq5 in the apo form 0.9006 23 239
3grz-assembly1.cif.gz_B crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8531 42 240
7r6k-assembly1.cif.gz_q state e2 nucleolar 60s ribosomal intermediate - model for noc2/noc3 region 0.8482 46 129
3g2q-assembly1.cif.gz_A crystal structure of the glycopeptide n-methyltransferase mtfa complexed with sinefungin 0.8426 43 164
2zbp-assembly1.cif.gz_A crystal structure of ribosomal protein l11 methyltransferase from thermus thermophilus in complex with s-adenosyl-l-methionine 0.8412 42 239
ID Description Score Start End Superfamily
af_P0A887_31_251_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.948 23 239 3.40.50.150
af_P9WFR3_19_228_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9465 24 239 3.40.50.150
af_C7J169_1_82_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9454 31 102 3.40.50.150
af_Q9VYF8_68_301_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.936 23 239 3.40.50.150
af_P9WFR3_19_228_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9292 24 239 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A285UAW9-F1-model_v4 Demethylmenaquinone methyltransferase (EC 2.1.1.163) 0.9588 13 242 GO:0009234
GO:0032259
GO:0043770
AF-A0A2J7R8A1-F1-model_v4 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial (EC 2.1.1.201) (Ubiquinone biosynthesis methyltransferase COQ5) 0.9494 13 239 GO:0008425
GO:0031314
GO:0032259
AF-A0A6A5KTX5-F1-model_v4 deleted 0.9492 11 240
AF-A0A2U2N2G9-F1-model_v4 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE (EC 2.1.1.163) (EC 2.1.1.201) (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase) (Demethylmenaquinone methyltransferase) 0.9468 13 238 GO:0008425
GO:0009060
GO:0009234
GO:0032259
GO:0043770
AF-A0A0D8Y6T8-F1-model_v4 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial (EC 2.1.1.201) (Ubiquinone biosynthesis methyltransferase COQ5) 0.9461 10 242 GO:0008425
GO:0031314
GO:0032259

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pLDDT pTM Quality
88.07 0.88 High
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Predicted Structure (AlphaFold2)

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