F215792

General Info

Members Datasets Scaffolds Average Seq Length
153 123 306 232

Family's Representative Sequence

Representative Sequence 3300001990|JGI24737J22298_10031955|JGI24737J22298_100319552
Length 270
Sequence MQEFERAAVDCEGFPGQTQFNRKSAFFSGTSSKKLYWDVSHSEERRAICLLSGGLDSSTCLAIARSQGFACYCLSFNYGQRHAQELQAAANVAQQLGAREHRILTIDLRGFGGSALTGDIAVPKDREERSMRAGIPVTYVPARNTIFLSFALAYAEVTGAADIFLGVNAIDYSGYPDCRPEFITAFERMANLATKAGVEGNSKFQIHTPLIRMTKADIVRKAIAFDVDLSLTHSCYDPDLSGRPCRRCDSCLLRRKGFEEAGVHDPLIVP

Samples

Sample ID Description Type Environment
1 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
36 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
51 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
52 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
53 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
73 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
74 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
75 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
76 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
77 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
78 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
79 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
80 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
81 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
82 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
83 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
84 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
85 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
86 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
87 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
88 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
89 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
90 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
91 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
92 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
95 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
96 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
97 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
98 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
99 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
100 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
101 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
102 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
103 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
104 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
105 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
106 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
107 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
108 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
109 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
110 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
111 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
112 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
113 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
114 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
115 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
116 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
117 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
118 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
119 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
120 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
121 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
122 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
123 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.69
Metatranscriptomes 1.31
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.65
Nodule 0
Rhizoplane 1.31
Rhizosphere 92.81
Stem 0
Stem Tuber 0
Unclassified 1.31

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10031955 3300001990 Bacteria 1642
2 JGI24746J21847_1014287 3300001977 Bacteria 1148
3 Ga0070683_100464314 3300005329 Bacteria 1208
4 Ga0070670_100002290 3300005331 Bacteria 15774
5 Ga0070666_10015508 3300005335 Bacteria 4862
6 Ga0070682_100717928 3300005337 Bacteria 803
7 Ga0070660_100163798 3300005339 Bacteria 1793
8 Ga0070660_100180249 3300005339 Bacteria 1709
9 Ga0070689_100150756 3300005340 Bacteria 1875
10 Ga0070692_10281198 3300005345 Bacteria 1008
11 Ga0070675_100041313 3300005354 Bacteria 3767
12 Ga0070675_100065331 3300005354 Bacteria 3008
13 Ga0070675_100199074 3300005354 Bacteria 1738
14 Ga0070671_100005312 3300005355 Bacteria 10277
15 Ga0070673_100112177 3300005364 Bacteria 2263
16 Ga0070673_100185170 3300005364 Bacteria 1784
17 Ga0070688_100316754 3300005365 Bacteria 1132
18 Ga0070659_100315383 3300005366 Bacteria 1306
19 Ga0070667_100193956 3300005367 Bacteria 1800
20 Ga0070713_100008410 3300005436 Bacteria 7316
21 Ga0070694_100022932 3300005444 Bacteria 4007
22 Ga0070708_100073531 3300005445 Bacteria 3082
23 Ga0070708_100642994 3300005445 Bacteria 1000
24 Ga0070678_100559567 3300005456 Bacteria 1016
25 Ga0070681_10199159 3300005458 Bacteria 1921
26 Ga0070706_100048995 3300005467 Bacteria 3898
27 Ga0070707_100190140 3300005468 Bacteria 2001
28 Ga0070699_100022516 3300005518 Bacteria 5431
29 Ga0070697_100066517 3300005536 Bacteria 2947
30 Ga0070695_100003864 3300005545 Bacteria 8740
31 Ga0070693_100011304 3300005547 Bacteria 4494
32 Ga0068855_100962008 3300005563 Bacteria 899
33 Ga0070664_100070560 3300005564 Bacteria 2992
34 Ga0070664_100232059 3300005564 Bacteria 1654
35 Ga0068856_100037355 3300005614 Bacteria 4767
36 Ga0081455_10196495 3300005937 Bacteria 1514
37 Ga0070717_10000114 3300006028 Bacteria 62795
38 Ga0068871_100047212 3300006358 Bacteria 3472
39 Ga0068871_100469009 3300006358 Bacteria 1131
40 Ga0075428_100026254 3300006844 Bacteria 6450
41 Ga0075428_100173963 3300006844 Bacteria 2332
42 Ga0075428_100679498 3300006844 Bacteria 1097
43 Ga0075430_100161016 3300006846 Bacteria 1868
44 Ga0075430_100383874 3300006846 Bacteria 1159
45 Ga0068865_100110499 3300006881 Bacteria 2027
46 Ga0075436_100009601 3300006914 Bacteria 6624
47 Ga0075435_100057286 3300007076 Bacteria 3152
48 Ga0111539_10446268 3300009094 Bacteria 1506
49 Ga0114129_10859505 3300009147 Bacteria 1152
50 Ga0105248_10000449 3300009177 Bacteria 46847
51 Ga0105237_10002749 3300009545 Bacteria 21438
52 Ga0105246_10071083 3300011119 Bacteria 2450
53 Ga0157371_10036734 3300013102 Bacteria 3508
54 Ga0157369_10035311 3300013105 Bacteria 5483
55 Ga0157374_10001836 3300013296 Bacteria 17880
56 Ga0157374_10010067 3300013296 Bacteria 8118
57 Ga0157374_10033256 3300013296 Bacteria 4704
58 Ga0157378_10157577 3300013297 Bacteria 2120
59 Ga0157378_10206743 3300013297 Bacteria 1859
60 Ga0163162_10045956 3300013306 Bacteria 4377
61 Ga0157372_10117794 3300013307 Bacteria 3046
62 Ga0157375_10022199 3300013308 Bacteria 5840
63 Ga0157376_10088953 3300014969 Bacteria 2669
64 Ga0213875_10000103 3300021388 Bacteria 96738
65 Ga0213875_10062250 3300021388 Bacteria 1745
66 Ga0224712_10188906 3300022467 Bacteria 932
67 Ga0207680_10034146 3300025903 Bacteria 2908
68 Ga0207707_10166430 3300025912 Bacteria 1927
69 Ga0207671_10012814 3300025914 Bacteria 6719
70 Ga0207657_10078043 3300025919 Bacteria 2790
71 Ga0207657_10376795 3300025919 Bacteria 1118
72 Ga0207657_10632124 3300025919 Bacteria 834
73 Ga0207652_10062624 3300025921 Bacteria 3215
74 Ga0207652_10550482 3300025921 Bacteria 1037
75 Ga0207646_10037336 3300025922 Bacteria 4380
76 Ga0207646_10160142 3300025922 Bacteria 2031
77 Ga0207659_10205464 3300025926 Bacteria 1576
78 Ga0207700_10006360 3300025928 Bacteria 7124
79 Ga0207706_10112817 3300025933 Bacteria 2391
80 Ga0207706_10369001 3300025933 Bacteria 1247
81 Ga0207665_10541628 3300025939 Bacteria 903
82 Ga0207711_10001418 3300025941 Bacteria 22434
83 Ga0207679_10136793 3300025945 Bacteria 1974
84 Ga0207639_10068259 3300026041 Bacteria 2769
85 Ga0207702_10187371 3300026078 Bacteria 1909
86 Ga0207641_10198280 3300026088 Bacteria 1849
87 Ga0207676_10633949 3300026095 Bacteria 1030
88 Ga0207674_10022032 3300026116 Bacteria 6851
89 Ga0207674_10438587 3300026116 Bacteria 1262
90 Ga0207683_10097811 3300026121 Bacteria 2618
91 Ga0265338_10016286 3300028800 Bacteria 8100
92 Ga0265770_1003918 3300030878 Bacteria 2025
93 Ga0265330_10028939 3300031235 Bacteria 2494
94 Ga0265328_10031393 3300031239 Bacteria 1974
95 Ga0265320_10003876 3300031240 Bacteria 9904
96 Ga0265329_10008373 3300031242 Bacteria 3926
97 Ga0265340_10012088 3300031247 Bacteria 4566
98 Ga0265339_10083099 3300031249 Bacteria 1689
99 Ga0265331_10032629 3300031250 Bacteria 2579
100 Ga0265316_10001880 3300031344 Bacteria 22044
101 Ga0265316_10029648 3300031344 Bacteria 4494
102 Ga0265316_10050683 3300031344 Bacteria 3263
103 Ga0307408_100135842 3300031548 Bacteria 1924
104 Ga0316575_10003495 3300031665 Bacteria 5428
105 Ga0265314_10007393 3300031711 Bacteria 9527
106 Ga0265342_10074439 3300031712 Bacteria 1973
107 Ga0316576_10008777 3300031727 Bacteria 6478
108 Ga0316578_10018693 3300031728 Bacteria 3803
109 Ga0316577_10025654 3300031733 Bacteria 3278
110 Ga0316577_10112797 3300031733 Bacteria 1526
111 Ga0307416_100331678 3300032002 Bacteria 1529
112 Ga0307415_100154004 3300032126 Bacteria 1773
113 Ga0373954_0002581 3300035118 Bacteria 7610
114 Ga0373956_0000366 3300035119 Bacteria 18400
115 Ga0373933_0013784 3300035724 Bacteria 4485
116 Ga0373937_0806719 3300036401 Bacteria 887
117 Ga0316584_0364623 3300036712 Bacteria 1035
118 Ga0436364_0129406 3300037853 Bacteria 129389
119 Ga0436364_0363857 3300037853 Bacteria 9663
120 Ga0436364_1032741 3300037853 Bacteria 3120
121 Ga0436364_1407566 3300037853 Bacteria 7636
122 Ga0436364_1472017 3300037853 Bacteria 3123
123 Ga0400489_35275 3300039093 Bacteria 72456
124 Ga0451577_0022753 3300042876 Bacteria 5722
125 Ga0451577_0415038 3300042876 Bacteria 1222
126 Ga0451577_0464933 3300042876 Bacteria 1149
127 Ga0453683_0142473 3300044673 Bacteria 1513
128 Ga0453684_0052344 3300044712 Bacteria 5341
129 Ga0453684_0546306 3300044712 Unclassified 1277
130 Ga0451576_0169175 3300045051 Bacteria 2281
131 Ga0495658_0006884 3300046683 Bacteria 5606
132 Ga0495636_0000584 3300047318 Bacteria 13410
133 Ga0496104_0925579 3300048907 Bacteria 776
134 Ga0496112_0020226 3300048915 Bacteria 6304
135 Ga0501069_0354395 3300049585 Bacteria 865
136 Ga0501070_0450266 3300049586 Bacteria 1038
137 Ga0501071_0345602 3300049587 Bacteria 1132
138 Ga0501074_0014187 3300049590 Bacteria 5795
139 Ga0501076_0206538 3300049592 Bacteria 1604
140 Ga0501077_0009709 3300049593 Bacteria 5983
141 Ga0501079_0133131 3300049741 Bacteria 1935
142 Ga0501080_0683245 3300049742 Bacteria 906
143 Ga0501081_0083732 3300049743 Bacteria 2236
144 Ga0501045_0206047 3300049824 Bacteria 1465
145 nmdc:mga05p37_6066_c1 3300050507 Bacteria 14227
146 nmdc:mga08y16_225619_c1 3300050511 Bacteria 1938
147 nmdc:mga0rr50_44_c1 3300050513 Bacteria 75700
148 nmdc:mga08x19_749_c1 3300050514 Bacteria 20754
149 Ga0495655_0000231 3300053083 Bacteria 10409
150 Ga0500556_0022259 3300053104 Unclassified 2056
151 Ga0501084_0312401 3300054114 Bacteria 1327
152 Ga0501082_0197302 3300060353 Bacteria 1751
153 Ga0530510_0277800 3300061734 Bacteria 1251
154 JGI24737J22298_10031955
155 JGI24746J21847_1014287
156 Ga0070683_100464314
157 Ga0070670_100002290
158 Ga0070666_10015508
159 Ga0070682_100717928
160 Ga0070660_100163798
161 Ga0070660_100180249
162 Ga0070689_100150756
163 Ga0070692_10281198
164 Ga0070675_100041313
165 Ga0070675_100065331
166 Ga0070675_100199074
167 Ga0070671_100005312
168 Ga0070673_100112177
169 Ga0070673_100185170
170 Ga0070688_100316754
171 Ga0070659_100315383
172 Ga0070667_100193956
173 Ga0070713_100008410
174 Ga0070694_100022932
175 Ga0070708_100073531
176 Ga0070708_100642994
177 Ga0070678_100559567
178 Ga0070681_10199159
179 Ga0070706_100048995
180 Ga0070707_100190140
181 Ga0070699_100022516
182 Ga0070697_100066517
183 Ga0070695_100003864
184 Ga0070693_100011304
185 Ga0068855_100962008
186 Ga0070664_100070560
187 Ga0070664_100232059
188 Ga0068856_100037355
189 Ga0081455_10196495
190 Ga0070717_10000114
191 Ga0068871_100047212
192 Ga0068871_100469009
193 Ga0075428_100026254
194 Ga0075428_100173963
195 Ga0075428_100679498
196 Ga0075430_100161016
197 Ga0075430_100383874
198 Ga0068865_100110499
199 Ga0075436_100009601
200 Ga0075435_100057286
201 Ga0111539_10446268
202 Ga0114129_10859505
203 Ga0105248_10000449
204 Ga0105237_10002749
205 Ga0105246_10071083
206 Ga0157371_10036734
207 Ga0157369_10035311
208 Ga0157374_10001836
209 Ga0157374_10010067
210 Ga0157374_10033256
211 Ga0157378_10157577
212 Ga0157378_10206743
213 Ga0163162_10045956
214 Ga0157372_10117794
215 Ga0157375_10022199
216 Ga0157376_10088953
217 Ga0213875_10000103
218 Ga0213875_10062250
219 Ga0224712_10188906
220 Ga0207680_10034146
221 Ga0207707_10166430
222 Ga0207671_10012814
223 Ga0207657_10078043
224 Ga0207657_10376795
225 Ga0207657_10632124
226 Ga0207652_10062624
227 Ga0207652_10550482
228 Ga0207646_10037336
229 Ga0207646_10160142
230 Ga0207659_10205464
231 Ga0207700_10006360
232 Ga0207706_10112817
233 Ga0207706_10369001
234 Ga0207665_10541628
235 Ga0207711_10001418
236 Ga0207679_10136793
237 Ga0207639_10068259
238 Ga0207702_10187371
239 Ga0207641_10198280
240 Ga0207676_10633949
241 Ga0207674_10022032
242 Ga0207674_10438587
243 Ga0207683_10097811
244 Ga0265338_10016286
245 Ga0265770_1003918
246 Ga0265330_10028939
247 Ga0265328_10031393
248 Ga0265320_10003876
249 Ga0265329_10008373
250 Ga0265340_10012088
251 Ga0265339_10083099
252 Ga0265331_10032629
253 Ga0265316_10001880
254 Ga0265316_10029648
255 Ga0265316_10050683
256 Ga0307408_100135842
257 Ga0316575_10003495
258 Ga0265314_10007393
259 Ga0265342_10074439
260 Ga0316576_10008777
261 Ga0316578_10018693
262 Ga0316577_10025654
263 Ga0316577_10112797
264 Ga0307416_100331678
265 Ga0307415_100154004
266 Ga0373954_0002581
267 Ga0373956_0000366
268 Ga0373933_0013784
269 Ga0373937_0806719
270 Ga0316584_0364623
271 Ga0436364_0129406
272 Ga0436364_0363857
273 Ga0436364_1032741
274 Ga0436364_1407566
275 Ga0436364_1472017
276 Ga0400489_35275
277 Ga0451577_0022753
278 Ga0451577_0415038
279 Ga0451577_0464933
280 Ga0453683_0142473
281 Ga0453684_0052344
282 Ga0453684_0546306
283 Ga0451576_0169175
284 Ga0495658_0006884
285 Ga0495636_0000584
286 Ga0496104_0925579
287 Ga0496112_0020226
288 Ga0501069_0354395
289 Ga0501070_0450266
290 Ga0501071_0345602
291 Ga0501074_0014187
292 Ga0501076_0206538
293 Ga0501077_0009709
294 Ga0501079_0133131
295 Ga0501080_0683245
296 Ga0501081_0083732
297 Ga0501045_0206047
298 nmdc:mga05p37_6066_c1
299 nmdc:mga08y16_225619_c1
300 nmdc:mga0rr50_44_c1
301 nmdc:mga08x19_749_c1
302 Ga0495655_0000231
303 Ga0500556_0022259
304 Ga0501084_0312401
305 Ga0501082_0197302
306 Ga0530510_0277800

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06508

QueC

Queuosine biosynthesis protein QueC

46

262

0.96

PF00733

Asn_synthase

Asparagine synthase

40

108

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bl5-assembly6.cif.gz_F crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8228 1 218
2pg3-assembly1.cif.gz_A-2 crystal structure of a queuosine biosynthesis protein quec (eca1155) from erwinia carotovora subsp. atroseptica scri1043 at 2.40 a resolution 0.8132 1 218
3bl5-assembly1.cif.gz_A crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8106 1 218
3bl5-assembly6.cif.gz_F crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.8072 1 218
3bl5-assembly1.cif.gz_A crystal structure of quec from bacillus subtilis: an enzyme involved in preq1 biosynthesis 0.795 1 218
ID Description Score Start End Superfamily
af_Q58742_1_231_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9065 1 225 3.40.50.620
af_Q58742_1_231_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8911 1 225 3.40.50.620
af_Q2G1X6_7_221_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8709 1 217 3.40.50.620
af_Q2G1X6_7_221_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.844 1 217 3.40.50.620
af_Q4DRR6_1_276_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.776 1 32 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A1Q6VHJ3-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) 0.9935 1 173
AF-A0A2E0X0C5-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.993 2 227 GO:0005524
GO:0008270
GO:0008616
GO:0016879
AF-A0A7W1U496-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.9911 1 226 GO:0005524
GO:0008270
GO:0008616
GO:0016879
AF-A0A0S8AL39-F1-model_v4 7-cyano-7-deazaguanine synthase (EC 6.3.4.20) (7-cyano-7-carbaguanine synthase) (PreQ(0) synthase) (Queuosine biosynthesis protein QueC) 0.9911 2 228 GO:0005524
GO:0008270
GO:0008616
GO:0016879
AF-A0A7Y5UPE5-F1-model_v4 deleted 0.9901 1 227

Map