F215336

General Info

Members Datasets Scaffolds Average Seq Length
152 67 150 386

Family's Representative Sequence

Representative Sequence 3300048905|Ga0496102_0000033|Ga0496102_0000033_2818_4041
Length 407
Sequence MTKQPIIDPKLIEFATPRQAEYVEASNRLGSMRAAARELKVHKNAVQDSIKRLKVVAAIEHGYAPGHFESGVAAGFNMGKVTVQRGPSGEVERTWERQSPDQERQREVMRAAAAAMAEDLPRAKPVKAPGLTDAKLASVYTLTDAHVGAMCWHRENLDPNGDWDLAIAERTLVGCFEHMVRASPPARIGIVAQLGDFLHSDGMGLIEGRTPTSGHVLDQDGRFSKVVQTAVRILRRVVGFALQKHERVVVLMAEGNHDLASSVWLRAMFKALYENEPRVEVIDSELPYYVYQHGTTMLAWHHGHMKKNDGLPLLFASQFPKVWGGTIKRYAHVGHRHHVEEKEHSGMTVVQHSTLAARDAYAARGGWMSERQCTAITYHADFGQVCRNTVTPEMLLAAQSGARPARP

Samples

Sample ID Description Type Environment
1 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
7 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
8 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
9 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
10 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
11 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
12 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
13 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
14 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
15 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
16 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
17 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
18 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
19 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
20 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
21 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
22 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
23 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
24 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
25 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
26 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
27 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
28 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
29 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
30 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
31 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
32 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
33 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
34 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
35 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
36 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
37 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
38 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
39 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
40 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
41 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
42 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
43 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
44 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
45 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
46 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
47 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
48 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
49 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
50 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
51 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
52 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
53 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
54 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
55 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
56 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
57 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
58 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
59 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
60 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
61 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
62 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
63 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
64 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
65 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
66 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
67 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.34
Metatranscriptomes 0
Isolates 0.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.97
Nodule 0
Rhizoplane 3.95
Rhizosphere 89.47
Stem 0
Stem Tuber 0
Unclassified 4.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1000124 3300002705 Bacteria 56363
2 JGI25165J46597_1000714 3300003214 Bacteria 26132
3 rootL2_10018717 3300003322 Bacteria 6101
4 rootL2_10311111 3300003322 Bacteria 1793
5 Ga0070658_10019490 3300005327 Bacteria 5432
6 Ga0068855_100000570 3300005563 Bacteria 45259
7 Ga0207427_100648 3300025231 Bacteria 16851
8 Ga0209759_1000088 3300025256 Bacteria 165748
9 Ga0209233_1000180 3300025261 Bacteria 140304
10 Ga0207705_10018584 3300025909 Bacteria 4968
11 Ga0207667_10000627 3300025949 Bacteria 45716
12 Ga0395899_0000300 3300037312 Bacteria 63613
13 Ga0395899_0000306 3300037312 Bacteria 62997
14 Ga0395899_0000351 3300037312 Bacteria 56193
15 Ga0395899_0000436 3300037312 Bacteria 47795
16 Ga0395899_0013577 3300037312 Bacteria 6227
17 Ga0395899_0039620 3300037312 Bacteria 3526
18 Ga0395899_0097151 3300037312 Bacteria 2130
19 Ga0395899_0122213 3300037312 Unclassified 1864
20 Ga0395899_0143600 3300037312 Unclassified 1696
21 Ga0395900_0000376 3300037418 Bacteria 64439
22 Ga0395900_0000416 3300037418 Bacteria 61415
23 Ga0395900_0000476 3300037418 Bacteria 56793
24 Ga0395900_0000634 3300037418 Bacteria 47272
25 Ga0395900_0000711 3300037418 Bacteria 44309
26 Ga0395900_0000883 3300037418 Bacteria 39331
27 Ga0395900_0001008 3300037418 Bacteria 36488
28 Ga0395900_0005745 3300037418 Bacteria 12962
29 Ga0395900_0006048 3300037418 Bacteria 12621
30 Ga0395900_0007153 3300037418 Bacteria 11566
31 Ga0395900_0008507 3300037418 Bacteria 10550
32 Ga0395900_0016640 3300037418 Bacteria 7500
33 Ga0395900_0024070 3300037418 Bacteria 6232
34 Ga0395900_0055375 3300037418 Viruses 4084
35 Ga0395900_0101429 3300037418 Bacteria 2956
36 Ga0395900_0209708 3300037418 Bacteria 1967
37 Ga0395900_0304577 3300037418 Unclassified 1578
38 Ga0395898_0000652 3300037466 Bacteria 62997
39 Ga0395898_0000749 3300037466 Bacteria 56688
40 Ga0395898_0000761 3300037466 Bacteria 56306
41 Ga0395898_0000994 3300037466 Bacteria 44552
42 Ga0395898_0002729 3300037466 Bacteria 20367
43 Ga0395898_0008624 3300037466 Bacteria 10758
44 Ga0395898_0008787 3300037466 Bacteria 10646
45 Ga0395898_0023099 3300037466 Bacteria 6288
46 Ga0395898_0024774 3300037466 Bacteria 6049
47 Ga0395898_0027016 3300037466 Bacteria 5766
48 Ga0395898_0028700 3300037466 Bacteria 5576
49 Ga0395898_0057061 3300037466 Unclassified 3805
50 Ga0395898_0095623 3300037466 Viruses 2854
51 Ga0395898_0186127 3300037466 Bacteria 1984
52 Ga0395898_0245755 3300037466 Unclassified 1706
53 Ga0395898_0262298 3300037466 Unclassified 1648
54 Ga0395898_0282783 3300037466 Unclassified 1582
55 Ga0395898_0314302 3300037466 Unclassified 1494
56 Ga0395898_0394502 3300037466 Unclassified 1319
57 Ga0395898_0554377 3300037466 Bacteria 1091
58 Ga0395905_0000385 3300037471 Bacteria 62998
59 Ga0395905_0000425 3300037471 Bacteria 58902
60 Ga0395905_0000457 3300037471 Bacteria 57111
61 Ga0395905_0001602 3300037471 Bacteria 26900
62 Ga0395905_0001696 3300037471 Bacteria 25967
63 Ga0395905_0020685 3300037471 Bacteria 6231
64 Ga0395905_0056549 3300037471 Viruses 3669
65 Ga0395905_0068910 3300037471 Bacteria 3313
66 Ga0395905_0189527 3300037471 Bacteria 1929
67 Ga0395901_0000281 3300038443 Bacteria 63103
68 Ga0395901_0020682 3300038443 Bacteria 6736
69 Ga0395901_0022147 3300038443 Bacteria 6510
70 Ga0395901_0024013 3300038443 Bacteria 6254
71 Ga0395901_0031197 3300038443 Bacteria 5494
72 Ga0395901_0042018 3300038443 Viruses 4738
73 Ga0395901_0049413 3300038443 Bacteria 4370
74 Ga0395901_0060130 3300038443 Viruses 3953
75 Ga0395901_0123284 3300038443 Viruses 2723
76 Ga0395901_0125397 3300038443 Viruses 2698
77 Ga0395901_0278503 3300038443 Unclassified 1738
78 Ga0395901_0363145 3300038443 Unclassified 1493
79 Ga0395901_0498168 3300038443 Bacteria 1240
80 Ga0237819_00783 3300038705 Bacteria 10169
81 Ga0237816_00558 3300039145 Bacteria 3155
82 Ga0466965_0007864 3300044683 Bacteria 4916
83 Ga0466964_0000006 3300044706 Bacteria 56958
84 Ga0466958_0000092 3300045836 Bacteria 27716
85 Ga0466967_0011595 3300045976 Unclassified 6690
86 Ga0495591_000206 3300046458 Bacteria 60027
87 Ga0495591_000313 3300046458 Bacteria 43969
88 Ga0495653_0000128 3300046463 Bacteria 63649
89 Ga0495605_0000397 3300046474 Bacteria 40079
90 Ga0495584_0000097 3300046491 Bacteria 59505
91 Ga0495585_0016032 3300046492 Viruses 4344
92 Ga0495585_0019664 3300046492 Bacteria 3891
93 Ga0495585_0093302 3300046492 Bacteria 1619
94 Ga0495594_0004379 3300046499 Bacteria 7265
95 Ga0495596_0000110 3300046500 Bacteria 57058
96 Ga0495596_0010202 3300046500 Unclassified 4100
97 Ga0495596_0038241 3300046500 Bacteria 1897
98 Ga0495606_0000635 3300046507 Bacteria 55212
99 Ga0495616_0000063 3300046513 Bacteria 91100
100 Ga0495616_0000137 3300046513 Bacteria 63594
101 Ga0495628_0001018 3300046516 Bacteria 25595
102 Ga0495628_0006179 3300046516 Bacteria 10472
103 Ga0495628_0259293 3300046516 Viruses 1296
104 Ga0495630_0003368 3300046517 Bacteria 11125
105 Ga0495631_0000790 3300046518 Bacteria 20238
106 Ga0495631_0052232 3300046518 Bacteria 1785
107 Ga0495643_0000368 3300046522 Bacteria 61398
108 Ga0495644_0000035 3300046523 Bacteria 65178
109 Ga0495644_0001578 3300046523 Bacteria 9294
110 Ga0495642_0000087 3300046528 Bacteria 53944
111 Ga0495642_0000146 3300046528 Bacteria 41101
112 Ga0495642_0050704 3300046528 Unclassified 1707
113 Ga0495652_0002051 3300046529 Bacteria 21324
114 Ga0495586_0005789 3300046535 Bacteria 6609
115 Ga0495586_0009132 3300046535 Bacteria 5273
116 Ga0495587_0000107 3300046536 Bacteria 62904
117 Ga0495587_0060828 3300046536 Bacteria 2213
118 Ga0495609_0000640 3300046538 Bacteria 27192
119 Ga0495622_0003382 3300046557 Bacteria 7522
120 Ga0495656_0009436 3300046615 Bacteria 3509
121 Ga0495634_0135848 3300046642 Viruses 1565
122 Ga0495661_0000265 3300046665 Bacteria 60027
123 Ga0495661_0000270 3300046665 Bacteria 59713
124 Ga0495661_0001434 3300046665 Bacteria 19922
125 Ga0495661_0017765 3300046665 Bacteria 4689
126 Ga0495588_0003008 3300046674 Bacteria 7291
127 Ga0495623_0002118 3300046679 Bacteria 13273
128 Ga0495669_0031218 3300046684 Unclassified 2340
129 Ga0495624_0008365 3300046690 Bacteria 7221
130 Ga0495589_0000257 3300046794 Bacteria 43392
131 Ga0495660_0000330 3300046810 Bacteria 42012
132 Ga0495604_0073928 3300047317 Viruses 2570
133 Ga0495604_0098753 3300047317 Bacteria 2150
134 Ga0495674_0000083 3300047319 Bacteria 65482
135 Ga0495683_0000187 3300047323 Bacteria 60027
136 Ga0495687_000976 3300047443 Bacteria 29032
137 Ga0495675_0086475 3300047444 Bacteria 1971
138 Ga0495686_0000286 3300047472 Bacteria 88793
139 Ga0495602_0000284 3300048088 Bacteria 46300
140 Ga0495602_0009057 3300048088 Bacteria 10366
141 Ga0495626_0000262 3300048091 Bacteria 60027
142 Ga0495626_0000264 3300048091 Bacteria 59477
143 Ga0496102_0000033 3300048905 Bacteria 213952
144 Ga0496104_0142900 3300048907 Bacteria 2299
145 Ga0496105_0060551 3300048908 Bacteria 3124
146 Ga0496106_0000008 3300048909 Bacteria 248430
147 Ga0496109_0016994 3300048912 Viruses 6369
148 Ga0496115_0026504 3300048918 Bacteria 4524
149 Ga0496124_0000556 3300048927 Bacteria 63104
150 Ga0495682_0004554 3300049460 Bacteria 5908

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300038443 Ga0395901_0363145 Ga0395901_0363145_371_1321 315
2 3300038443 Ga0395901_0498168 Ga0395901_0498168_181_1131 315
3 3300037466 Ga0395898_0028700 Ga0395898_0028700_381_1334 316
4 3300037466 Ga0395898_0554377 Ga0395898_0554377_10_963 316
5 3300037418 Ga0395900_0005745 Ga0395900_0005745_290_1285 330
6 3300046500 Ga0495596_0010202 Ga0495596_0010202_15_1097 356
7 3300047472 Ga0495686_0000286 Ga0495686_0000286_32473_33663 357
8 3300047317 Ga0495604_0073928 Ga0495604_0073928_1390_2487 359
9 3300037466 Ga0395898_0262298 Ga0395898_0262298_161_1258 362
10 3300037466 Ga0395898_0186127 Ga0395898_0186127_17_1117 363
11 3300046492 Ga0495585_0016032 Ga0495585_0016032_819_1922 364
12 3300037466 Ga0395898_0008624 Ga0395898_0008624_2605_3705 365
13 3300037312 Ga0395899_0122213 Ga0395899_0122213_441_1547 366
14 3300037312 Ga0395899_0143600 Ga0395899_0143600_516_1619 366
15 3300037418 Ga0395900_0006048 Ga0395900_0006048_5601_6704 366
16 3300037418 Ga0395900_0055375 Ga0395900_0055375_2843_3946 366
17 3300037418 Ga0395900_0304577 Ga0395900_0304577_149_1252 366
18 3300037466 Ga0395898_0024774 Ga0395898_0024774_4636_5739 366
19 3300037466 Ga0395898_0027016 Ga0395898_0027016_3574_4677 366
20 3300037466 Ga0395898_0057061 Ga0395898_0057061_1269_2372 366
21 3300037466 Ga0395898_0282783 Ga0395898_0282783_199_1305 366
22 3300038443 Ga0395901_0060130 Ga0395901_0060130_78_1181 366
23 3300037466 Ga0395898_0002729 Ga0395898_0002729_15278_16384 367
24 3300048927 Ga0496124_0000556 Ga0496124_0000556_59258_60433 367
25 3300037418 Ga0395900_0000711 Ga0395900_0000711_15697_16806 368
26 3300037466 Ga0395898_0000994 Ga0395898_0000994_4099_5208 368
27 3300037466 Ga0395898_0314302 Ga0395898_0314302_261_1370 368
28 3300037471 Ga0395905_0068910 Ga0395905_0068910_2097_3206 368
29 3300038443 Ga0395901_0125397 Ga0395901_0125397_796_1905 368
30 3300037466 Ga0395898_0095623 Ga0395898_0095623_122_1234 369
31 3300037466 Ga0395898_0394502 Ga0395898_0394502_121_1233 369
32 3300046458 Ga0495591_000206 Ga0495591_000206_46121_47308 369
33 3300046665 Ga0495661_0000265 Ga0495661_0000265_3075_4262 369
34 3300047323 Ga0495683_0000187 Ga0495683_0000187_55766_56953 369
35 3300048091 Ga0495626_0000262 Ga0495626_0000262_22457_23644 369
36 3300046513 Ga0495616_0000137 Ga0495616_0000137_21286_22467 371
37 3300046665 Ga0495661_0017765 Ga0495661_0017765_1695_2888 377
38 3300046665 Ga0495661_0000270 Ga0495661_0000270_56361_57548 379
39 3300037312 Ga0395899_0039620 Ga0395899_0039620_1745_2941 380
40 3300037418 Ga0395900_0209708 Ga0395900_0209708_637_1833 380
41 3300037466 Ga0395898_0245755 Ga0395898_0245755_252_1448 380
42 3300037471 Ga0395905_0189527 Ga0395905_0189527_615_1811 380
43 3300038443 Ga0395901_0278503 Ga0395901_0278503_289_1485 380
44 3300037418 Ga0395900_0101429 Ga0395900_0101429_269_1420 383
45 3300046665 Ga0495661_0001434 Ga0495661_0001434_677_1867 383
46 3300046500 Ga0495596_0038241 Ga0495596_0038241_625_1818 384
47 3300046513 Ga0495616_0000063 Ga0495616_0000063_18366_19559 384
48 3300046513 Ga0495616_0000063 Ga0495616_0000063_63858_65051 384
49 3300037312 Ga0395899_0000436 Ga0395899_0000436_13666_14859 385
50 3300037418 Ga0395900_0007153 Ga0395900_0007153_3835_5028 385
51 3300037418 Ga0395900_0008507 Ga0395900_0008507_3530_4723 385
52 3300037466 Ga0395898_0000749 Ga0395898_0000749_4053_5246 385
53 3300037471 Ga0395905_0000457 Ga0395905_0000457_17758_18951 385
54 3300038443 Ga0395901_0022147 Ga0395901_0022147_1483_2676 385
55 3300038443 Ga0395901_0031197 Ga0395901_0031197_772_1965 385
56 iso_pu_bacteria 2808606418 2809142086 386
57 3300038705 Ga0237819_00783 Ga0237819_00783_4765_5928 387
58 3300039145 Ga0237816_00558 Ga0237816_00558_1907_3070 387
59 3300045836 Ga0466958_0000092 Ga0466958_0000092_15971_17170 387
60 3300005563 Ga0068855_100000570 Ga0068855_10000057028 388
61 3300025949 Ga0207667_10000627 Ga0207667_1000062729 388
62 3300037312 Ga0395899_0000300 Ga0395899_0000300_21086_22261 388
63 3300037312 Ga0395899_0013577 Ga0395899_0013577_2100_3275 388
64 3300037418 Ga0395900_0000376 Ga0395900_0000376_5820_6995 388
65 3300037418 Ga0395900_0024070 Ga0395900_0024070_2957_4132 388
66 3300037471 Ga0395905_0020685 Ga0395905_0020685_2957_4132 388
67 3300038443 Ga0395901_0020682 Ga0395901_0020682_3124_4299 388
68 3300038443 Ga0395901_0024013 Ga0395901_0024013_3284_4459 388
69 3300045976 Ga0466967_0011595 Ga0466967_0011595_3168_4358 388
70 3300046500 Ga0495596_0000110 Ga0495596_0000110_30492_31667 388
71 3300048091 Ga0495626_0000264 Ga0495626_0000264_25269_26444 388
72 3300048912 Ga0496109_0016994 Ga0496109_0016994_93_1268 388
73 3300003322 rootL2_10018717 rootL2_100187175 389
74 3300005327 Ga0070658_10019490 Ga0070658_100194906 389
75 3300025909 Ga0207705_10018584 Ga0207705_100185844 389
76 3300037312 Ga0395899_0000306 Ga0395899_0000306_58087_59268 389
77 3300037312 Ga0395899_0097151 Ga0395899_0097151_685_1869 389
78 3300037418 Ga0395900_0000416 Ga0395900_0000416_3633_4811 389
79 3300037418 Ga0395900_0000476 Ga0395900_0000476_4388_5566 389
80 3300037418 Ga0395900_0000883 Ga0395900_0000883_5666_6844 389
81 3300037418 Ga0395900_0001008 Ga0395900_0001008_5625_6806 389
82 3300037418 Ga0395900_0016640 Ga0395900_0016640_5082_6266 389
83 3300037466 Ga0395898_0000652 Ga0395898_0000652_48575_49756 389
84 3300037466 Ga0395898_0000761 Ga0395898_0000761_3633_4811 389
85 3300037466 Ga0395898_0008787 Ga0395898_0008787_6996_8174 389
86 3300037471 Ga0395905_0000385 Ga0395905_0000385_29683_30864 389
87 3300037471 Ga0395905_0000425 Ga0395905_0000425_22778_23956 389
88 3300037471 Ga0395905_0001602 Ga0395905_0001602_9084_10262 389
89 3300037471 Ga0395905_0001696 Ga0395905_0001696_22772_23956 389
90 3300038443 Ga0395901_0000281 Ga0395901_0000281_21774_22955 389
91 3300038443 Ga0395901_0049413 Ga0395901_0049413_61_1239 389
92 3300038443 Ga0395901_0123284 Ga0395901_0123284_960_2144 389
93 3300044683 Ga0466965_0007864 Ga0466965_0007864_91_1278 389
94 3300046463 Ga0495653_0000128 Ga0495653_0000128_49916_51100 389
95 3300046499 Ga0495594_0004379 Ga0495594_0004379_552_1736 389
96 3300046517 Ga0495630_0003368 Ga0495630_0003368_3781_4965 389
97 3300046535 Ga0495586_0009132 Ga0495586_0009132_563_1747 389
98 3300046536 Ga0495587_0060828 Ga0495587_0060828_102_1286 389
99 3300047443 Ga0495687_000976 Ga0495687_000976_26242_27426 389
100 3300046522 Ga0495643_0000368 Ga0495643_0000368_46154_47341 390
101 3300047319 Ga0495674_0000083 Ga0495674_0000083_13101_14276 390
102 3300044706 Ga0466964_0000006 Ga0466964_0000006_39515_40699 391
103 3300046516 Ga0495628_0006179 Ga0495628_0006179_2748_3923 391
104 3300046516 Ga0495628_0259293 Ga0495628_0259293_61_1236 391
105 3300046528 Ga0495642_0000087 Ga0495642_0000087_25034_26224 391
106 3300046529 Ga0495652_0002051 Ga0495652_0002051_19455_20630 391
107 3300046535 Ga0495586_0005789 Ga0495586_0005789_201_1385 391
108 3300046536 Ga0495587_0000107 Ga0495587_0000107_37748_38932 391
109 3300046642 Ga0495634_0135848 Ga0495634_0135848_322_1497 391
110 3300048088 Ga0495602_0000284 Ga0495602_0000284_32949_34124 391
111 3300048088 Ga0495602_0009057 Ga0495602_0009057_7809_8984 391
112 3300046491 Ga0495584_0000097 Ga0495584_0000097_50110_51306 392
113 3300046492 Ga0495585_0093302 Ga0495585_0093302_167_1360 392
114 3300046507 Ga0495606_0000635 Ga0495606_0000635_51428_52624 392
115 3300046518 Ga0495631_0000790 Ga0495631_0000790_3691_4887 392
116 3300046523 Ga0495644_0000035 Ga0495644_0000035_56425_57621 392
117 3300046528 Ga0495642_0000146 Ga0495642_0000146_3622_4818 392
118 3300046615 Ga0495656_0009436 Ga0495656_0009436_437_1633 392
119 3300046679 Ga0495623_0002118 Ga0495623_0002118_7340_8530 392
120 3300048907 Ga0496104_0142900 Ga0496104_0142900_1049_2227 392
121 3300048908 Ga0496105_0060551 Ga0496105_0060551_1598_2776 392
122 3300048909 Ga0496106_0000008 Ga0496106_0000008_159015_160196 392
123 3300037312 Ga0395899_0000351 Ga0395899_0000351_34574_35770 393
124 3300037418 Ga0395900_0000634 Ga0395900_0000634_16210_17406 393
125 3300037466 Ga0395898_0023099 Ga0395898_0023099_1725_2921 393
126 3300037471 Ga0395905_0056549 Ga0395905_0056549_1818_3014 393
127 3300038443 Ga0395901_0042018 Ga0395901_0042018_1818_3014 393
128 3300046458 Ga0495591_000313 Ga0495591_000313_33793_34992 393
129 3300046474 Ga0495605_0000397 Ga0495605_0000397_20896_22095 393
130 3300046492 Ga0495585_0019664 Ga0495585_0019664_16_1215 393
131 3300046518 Ga0495631_0052232 Ga0495631_0052232_530_1729 393
132 3300046523 Ga0495644_0001578 Ga0495644_0001578_6766_7965 393
133 3300046528 Ga0495642_0050704 Ga0495642_0050704_416_1615 393
134 3300046538 Ga0495609_0000640 Ga0495609_0000640_5212_6411 393
135 3300046557 Ga0495622_0003382 Ga0495622_0003382_210_1409 393
136 3300046674 Ga0495588_0003008 Ga0495588_0003008_3458_4657 393
137 3300046684 Ga0495669_0031218 Ga0495669_0031218_244_1443 393
138 3300046690 Ga0495624_0008365 Ga0495624_0008365_292_1473 393
139 3300046794 Ga0495589_0000257 Ga0495589_0000257_37141_38340 393
140 3300046810 Ga0495660_0000330 Ga0495660_0000330_9150_10349 393
141 3300047317 Ga0495604_0098753 Ga0495604_0098753_931_2112 393
142 3300047444 Ga0495675_0086475 Ga0495675_0086475_765_1946 393
143 3300048905 Ga0496102_0000033 Ga0496102_0000033_2818_4041 393
144 3300049460 Ga0495682_0004554 Ga0495682_0004554_1396_2595 393
145 3300002705 JGI25156J39149_1000124 JGI25156J39149_100012449 394
146 3300003214 JGI25165J46597_1000714 JGI25165J46597_100071455 394
147 3300003322 rootL2_10311111 rootL2_103111113 394
148 3300025231 Ga0207427_100648 Ga0207427_1006482 394
149 3300025256 Ga0209759_1000088 Ga0209759_100008836 394
150 3300025261 Ga0209233_1000180 Ga0209233_100018080 394
151 3300046516 Ga0495628_0001018 Ga0495628_0001018_11285_12475 394
152 3300048918 Ga0496115_0026504 Ga0496115_0026504_1902_3086 394

Structural Annotation

Top 5 Hits

ID Description Score Start End
3clo-assembly2.cif.gz_C-2 crystal structure of putative transcriptional regulator containing a luxr dna binding domain (np_811094.1) from bacteroides thetaiotaomicron vpi-5482 at 2.04 a resolution 0.7925 9 54
7vim-assembly1.cif.gz_A the c-terminal dna binding domain of esrb from edwardsiella piscicida 0.7924 13 56
4iht-assembly1.cif.gz_A crystal structure of benm_dbd/bena site 1 dna complex 0.7911 13 65
6ide-assembly1.cif.gz_A crystal structure of the vibrio cholera vqma-ligand-dna complex provides molecular mechanisms for drug design 0.791 13 56
4ihs-assembly1.cif.gz_B crystal structure of benm_dbd/catb site 1 dna complex 0.7897 13 65
ID Description Score Start End Superfamily
af_P37682_6_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.945 13 56 1.10.10.10
af_P9WMF5_6_80_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9232 13 56 1.10.10.10
af_P0ACR4_1_83_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9223 16 56 1.10.10.10
af_P33634_1_88_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9171 13 56 1.10.10.10
af_Q47141_1_83_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9059 13 56 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A0R0CH79-F1-model_v4 Calcineurin-like phosphoesterase domain-containing protein 0.9208 223 392
AF-A0A2D7XC32-F1-model_v4 Uncharacterized protein 0.9187 4 62
AF-A0A3S3U886-F1-model_v4 Uncharacterized protein 0.911 258 385
AF-A0A0R0CH79-F1-model_v4 Calcineurin-like phosphoesterase domain-containing protein 0.9056 223 392
AF-A0A2E3A9G6-F1-model_v4 Uncharacterized protein 0.9002 263 385

Feature Viewer

pLDDT pTM Quality
78.7 0.69 Medium
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Predicted Structure (AlphaFold2)

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