F215177

General Info

Members Datasets Scaffolds Average Seq Length
152 111 151 399

Family's Representative Sequence

Representative Sequence 3300046462|Ga0495651_0025778|Ga0495651_0025778_2371_3720
Length 444
Sequence VKILVANLGSTSLKWRLFDFSSGPERLLHKGGFERVTDYPKAIEDCLTELKKAGAIQSEKDLAAVGFKTVLARDITGCVRLDERVLKAMADYNGLAPAHNPPYISGIKLFAQRIPDVPLVGLFETAFYQFAPPALMRYAVPAAWHGAGVRRFGFHGASHKFIAERSAELLGREEVARRAQNLYVDGGRTKIDGSPLRVISCHLGGSSSVTGILNGAAIGTSMGMSPQSGLPQNNRVGDLDAEAVPYAVKALGLTIEEAQRQLSKESGLKGLSGVSNDIREISDAATKGNPAARMALDVFVASARHWIGSYFFQLNGADAIVFTAGIGENRPELRAAICANLDQLGIVLDEAKNNSTKAHEAVISAAPSRVKVLVIPTNEELVVAREVKRFLENPRSEVRGPKELENTGRAGADFSAMTSRISNFLRTSDFGFRICSLSTLNHQR

Samples

Sample ID Description Type Environment
1 2838042994 Rhizobium esperanzae SEMIA 4089 Isolate Nodule
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
6 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
10 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
16 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
21 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
22 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
43 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
44 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
45 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
46 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
47 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
48 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
49 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
50 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
51 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
52 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
53 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
54 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
55 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
56 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
57 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
58 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
59 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
60 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
61 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
62 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
63 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
65 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
66 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
67 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
68 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
71 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
72 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
73 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
74 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
75 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
76 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
77 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
78 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
79 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
80 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
81 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
82 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
83 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
92 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
93 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
94 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
95 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
96 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
97 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
98 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
99 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
103 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
104 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
105 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
106 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
107 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
108 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
109 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
110 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
111 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.34
Metatranscriptomes 0
Isolates 0.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.97
Nodule 0.66
Rhizoplane 1.32
Rhizosphere 96.05
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070683_100219214 3300005329 Bacteria 1808
2 Ga0070690_100058551 3300005330 Bacteria 2474
3 Ga0070689_100078804 3300005340 Bacteria 2583
4 Ga0070689_100100712 3300005340 Bacteria 2286
5 Ga0070687_100007542 3300005343 Bacteria 4543
6 Ga0070701_10002740 3300005438 Bacteria 6829
7 Ga0070708_100062839 3300005445 Bacteria 3322
8 Ga0070678_100320770 3300005456 Unclassified 1323
9 Ga0070686_100003979 3300005544 Bacteria 8127
10 Ga0070704_100007297 3300005549 Bacteria 6576
11 Ga0068855_100164080 3300005563 Unclassified 2519
12 Ga0068857_100001400 3300005577 Bacteria 19042
13 Ga0068859_100046268 3300005617 Bacteria 4370
14 Ga0068859_100099477 3300005617 Bacteria 2964
15 Ga0068859_100205639 3300005617 Bacteria 2054
16 Ga0068863_100015459 3300005841 Bacteria 7337
17 Ga0081538_10048077 3300005981 Bacteria 2607
18 Ga0075364_10023857 3300006051 Bacteria 3876
19 Ga0070712_100151307 3300006175 Bacteria 1782
20 Ga0075431_100091433 3300006847 Unclassified 3141
21 Ga0075433_10081396 3300006852 Bacteria 2855
22 Ga0075434_100244059 3300006871 Bacteria 1816
23 Ga0075429_100149856 3300006880 Bacteria 2042
24 Ga0097620_100046268 3300006931 Bacteria 4370
25 Ga0097620_100099479 3300006931 Bacteria 2964
26 Ga0097620_100205644 3300006931 Bacteria 2054
27 Ga0105240_10007881 3300009093 Bacteria 15357
28 Ga0105240_10046945 3300009093 Bacteria 5468
29 Ga0105240_10058387 3300009093 Bacteria 4817
30 Ga0105240_10236457 3300009093 Bacteria 2120
31 Ga0111539_10077719 3300009094 Bacteria 3906
32 Ga0111539_10306361 3300009094 Bacteria 1848
33 Ga0105245_10255983 3300009098 Unclassified 1702
34 Ga0105242_10139561 3300009176 Bacteria 2102
35 Ga0105238_10022004 3300009551 Bacteria 6497
36 Ga0157370_10105381 3300013104 Unclassified 2639
37 Ga0157375_10000068 3300013308 Bacteria 110172
38 Ga0163163_10000091 3300014325 Bacteria 96507
39 Ga0157380_10005457 3300014326 Bacteria 8885
40 Ga0207695_10038097 3300025913 Bacteria 5181
41 Ga0207695_10060170 3300025913 Bacteria 3933
42 Ga0207662_10024943 3300025918 Bacteria 3442
43 Ga0207657_10320242 3300025919 Bacteria 1226
44 Ga0207694_10013226 3300025924 Bacteria 6213
45 Ga0207694_10030829 3300025924 Bacteria 4094
46 Ga0207650_10083829 3300025925 Bacteria 2422
47 Ga0207659_10001747 3300025926 Bacteria 12872
48 Ga0207670_10001647 3300025936 Bacteria 11658
49 Ga0207670_10094208 3300025936 Bacteria 2124
50 Ga0207669_10105274 3300025937 Bacteria 1876
51 Ga0207641_10010394 3300026088 Bacteria 7648
52 Ga0207641_10054129 3300026088 Bacteria 3404
53 Ga0207674_10012252 3300026116 Bacteria 9590
54 Ga0265322_10009106 3300028654 Bacteria 2885
55 Ga0265338_10000038 3300028800 Bacteria 237195
56 Ga0265338_10001139 3300028800 Bacteria 43978
57 Ga0265338_10002771 3300028800 Bacteria 25646
58 Ga0265338_10026125 3300028800 Bacteria 5900
59 Ga0265338_10039609 3300028800 Bacteria 4442
60 Ga0265338_10066831 3300028800 Bacteria 3109
61 Ga0265324_10000911 3300029957 Bacteria 18695
62 Ga0265324_10004359 3300029957 Bacteria 6431
63 Ga0265324_10017140 3300029957 Bacteria 2635
64 Ga0265332_10027937 3300031238 Bacteria 2471
65 Ga0265328_10044848 3300031239 Bacteria 1626
66 Ga0265325_10009792 3300031241 Bacteria 5583
67 Ga0265329_10000980 3300031242 Bacteria 14278
68 Ga0265331_10060154 3300031250 Bacteria 1795
69 Ga0265327_10003813 3300031251 Bacteria 13937
70 Ga0265327_10004267 3300031251 Bacteria 12807
71 Ga0265327_10017243 3300031251 Bacteria 4541
72 Ga0265316_10135271 3300031344 Bacteria 1854
73 Ga0265314_10000142 3300031711 Bacteria 108299
74 Ga0265342_10072823 3300031712 Bacteria 1999
75 Ga0316576_10052597 3300031727 Bacteria 2966
76 Ga0373930_0000054 3300034816 Bacteria 10635
77 Ga0373928_0000275 3300035084 Bacteria 10133
78 Ga0373949_0003885 3300035090 Bacteria 3471
79 Ga0373951_0007201 3300035091 Bacteria 2531
80 Ga0373932_0000006 3300035112 Bacteria 208547
81 Ga0373962_0000299 3300035242 Bacteria 10680
82 Ga0316574_0117659 3300035398 Unclassified 1705
83 Ga0373931_0000009 3300035691 Bacteria 349854
84 Ga0373931_0093308 3300035691 Unclassified 1681
85 Ga0373935_0109824 3300035692 Bacteria 1829
86 Ga0373927_0037061 3300035695 Bacteria 3170
87 Ga0373947_0029831 3300035725 Unclassified 3202
88 Ga0373947_0030608 3300035725 Bacteria 3164
89 Ga0373925_0001202 3300037068 Bacteria 22811
90 Ga0373925_0004386 3300037068 Bacteria 10663
91 Ga0373925_0020562 3300037068 Bacteria 4807
92 Ga0451577_0001129 3300042876 Bacteria 37856
93 Ga0451577_0067976 3300042876 Bacteria 3178
94 Ga0451577_0116078 3300042876 Bacteria 2397
95 Ga0453684_0001721 3300044712 Bacteria 58635
96 Ga0453684_0006457 3300044712 Bacteria 22262
97 Ga0453684_0031228 3300044712 Bacteria 7493
98 Ga0451576_0047425 3300045051 Bacteria 4517
99 Ga0451576_0089613 3300045051 Unclassified 3199
100 Ga0451576_0166978 3300045051 Bacteria 2297
101 Ga0451576_0404684 3300045051 Bacteria 1431
102 Ga0495651_0025778 3300046462 Bacteria 4578
103 Ga0495630_0000019 3300046517 Bacteria 182603
104 Ga0495630_0014593 3300046517 Bacteria 5727
105 Ga0495630_0103257 3300046517 Bacteria 2157
106 Ga0495666_0023235 3300046526 Unclassified 3066
107 Ga0495586_0000442 3300046535 Bacteria 24932
108 Ga0495645_0030193 3300046543 Unclassified 3947
109 Ga0495658_0020365 3300046683 Bacteria 3479
110 Ga0495658_0062760 3300046683 Bacteria 2136
111 Ga0495613_0115763 3300046689 Bacteria 1929
112 Ga0495674_0000154 3300047319 Bacteria 53023
113 Ga0495676_0062465 3300047321 Bacteria 2908
114 Ga0495680_0164564 3300047322 Bacteria 1609
115 Ga0495675_0027417 3300047444 Unclassified 3629
116 Ga0496107_0139720 3300048910 Bacteria 1790
117 Ga0496115_0003749 3300048918 Bacteria 10930
118 Ga0501031_0000331 3300049568 Bacteria 27355
119 Ga0501032_0066207 3300049569 Bacteria 2415
120 Ga0501033_0011186 3300049570 Bacteria 6874
121 Ga0501033_0088371 3300049570 Bacteria 2267
122 Ga0501036_0034572 3300049572 Bacteria 4276
123 Ga0501038_0034906 3300049574 Bacteria 4420
124 Ga0501039_0046767 3300049575 Bacteria 3344
125 Ga0501042_0093491 3300049578 Bacteria 2159
126 Ga0501048_0091907 3300049582 Bacteria 2140
127 Ga0501071_0057316 3300049587 Bacteria 2815
128 Ga0501072_0040437 3300049588 Bacteria 3661
129 Ga0501072_0128832 3300049588 Bacteria 2016
130 Ga0501074_0012396 3300049590 Bacteria 6197
131 Ga0501075_0013318 3300049591 Bacteria 5868
132 Ga0501075_0074082 3300049591 Bacteria 2576
133 Ga0501076_0026398 3300049592 Bacteria 4499
134 Ga0501076_0229663 3300049592 Bacteria 1517
135 Ga0501077_0033894 3300049593 Bacteria 3250
136 Ga0501079_0007665 3300049741 Bacteria 8171
137 Ga0501080_0096160 3300049742 Bacteria 2750
138 Ga0501081_0017427 3300049743 Bacteria 4754
139 Ga0501035_0021670 3300049822 Bacteria 5909
140 Ga0501044_0066677 3300049823 Bacteria 3669
141 Ga0501045_0034083 3300049824 Bacteria 3694
142 nmdc:mga00v17_3878_c1 3300050491 Bacteria 7713
143 nmdc:mga09592_158532_c1 3300050508 Bacteria 1954
144 nmdc:mga06r32_33848_c1 3300050510 Bacteria 4815
145 nmdc:mga08y16_122634_c1 3300050511 Bacteria 2704
146 nmdc:mga08y16_179032_c1 3300050511 Bacteria 2201
147 nmdc:mga0n895_292332_c1 3300050512 Bacteria 1652
148 nmdc:mga0a205_6971_c1 3300050515 Bacteria 10221
149 Ga0500627_0024850 3300053158 Bacteria 2456
150 Ga0501084_0010800 3300054114 Bacteria 7560
151 Ga0501082_0014828 3300060353 Bacteria 6714

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006852 Ga0075433_10081396 Ga0075433_100813963 321
2 3300006871 Ga0075434_100244059 Ga0075434_1002440592 321
3 3300050512 nmdc:mga0n895_292332_c1 nmdc:mga0n895_292332_c1_148_1344 321
4 3300050515 nmdc:mga0a205_6971_c1 nmdc:mga0a205_6971_c1_8282_9478 321
5 3300025919 Ga0207657_10320242 Ga0207657_103202421 358
6 iso_pu_bacteria 2838042994 2838044002 358
7 3300049582 Ga0501048_0091907 Ga0501048_0091907_727_1911 364
8 3300049588 Ga0501072_0040437 Ga0501072_0040437_2102_3286 364
9 3300049591 Ga0501075_0074082 Ga0501075_0074082_817_2001 364
10 3300005445 Ga0070708_100062839 Ga0070708_1000628394 365
11 3300005981 Ga0081538_10048077 Ga0081538_100480772 365
12 3300049592 Ga0501076_0229663 Ga0501076_0229663_201_1382 365
13 3300053158 Ga0500627_0024850 Ga0500627_0024850_782_1975 366
14 3300014326 Ga0157380_10005457 Ga0157380_100054578 368
15 3300045051 Ga0451576_0404684 Ga0451576_0404684_21_1127 368
16 3300050511 nmdc:mga08y16_179032_c1 nmdc:mga08y16_179032_c1_553_1746 368
17 3300025926 Ga0207659_10001747 Ga0207659_100017477 369
18 3300025937 Ga0207669_10105274 Ga0207669_101052742 369
19 3300006051 Ga0075364_10023857 Ga0075364_100238573 370
20 3300042876 Ga0451577_0067976 Ga0451577_0067976_2016_3128 370
21 3300050491 nmdc:mga00v17_3878_c1 nmdc:mga00v17_3878_c1_3572_4774 370
22 3300031727 Ga0316576_10052597 Ga0316576_100525972 372
23 3300049572 Ga0501036_0034572 Ga0501036_0034572_608_1819 374
24 3300049574 Ga0501038_0034906 Ga0501038_0034906_170_1381 374
25 3300049575 Ga0501039_0046767 Ga0501039_0046767_834_2045 374
26 3300049578 Ga0501042_0093491 Ga0501042_0093491_460_1671 374
27 3300049587 Ga0501071_0057316 Ga0501071_0057316_985_2196 374
28 3300049588 Ga0501072_0128832 Ga0501072_0128832_527_1738 374
29 3300049590 Ga0501074_0012396 Ga0501074_0012396_1135_2346 374
30 3300049591 Ga0501075_0013318 Ga0501075_0013318_1008_2219 374
31 3300049592 Ga0501076_0026398 Ga0501076_0026398_3015_4226 374
32 3300049593 Ga0501077_0033894 Ga0501077_0033894_511_1722 374
33 3300049741 Ga0501079_0007665 Ga0501079_0007665_6031_7242 374
34 3300049742 Ga0501080_0096160 Ga0501080_0096160_1206_2417 374
35 3300049743 Ga0501081_0017427 Ga0501081_0017427_1032_2243 374
36 3300049824 Ga0501045_0034083 Ga0501045_0034083_1527_2738 374
37 3300054114 Ga0501084_0010800 Ga0501084_0010800_5693_6904 374
38 3300060353 Ga0501082_0014828 Ga0501082_0014828_1456_2667 374
39 3300035725 Ga0373947_0030608 Ga0373947_0030608_317_1534 378
40 3300028800 Ga0265338_10066831 Ga0265338_100668314 381
41 3300046683 Ga0495658_0062760 Ga0495658_0062760_828_2018 381
42 3300029957 Ga0265324_10004359 Ga0265324_100043597 382
43 3300031251 Ga0265327_10017243 Ga0265327_100172433 382
44 3300034816 Ga0373930_0000054 Ga0373930_0000054_2881_4110 382
45 3300035084 Ga0373928_0000275 Ga0373928_0000275_336_1565 382
46 3300035090 Ga0373949_0003885 Ga0373949_0003885_822_2051 382
47 3300035091 Ga0373951_0007201 Ga0373951_0007201_258_1487 382
48 3300035112 Ga0373932_0000006 Ga0373932_0000006_25007_26236 382
49 3300035242 Ga0373962_0000299 Ga0373962_0000299_372_1601 382
50 3300035691 Ga0373931_0000009 Ga0373931_0000009_23322_24551 382
51 3300035695 Ga0373927_0037061 Ga0373927_0037061_1420_2649 382
52 3300037068 Ga0373925_0001202 Ga0373925_0001202_21204_22433 382
53 3300009094 Ga0111539_10306361 Ga0111539_103063611 384
54 3300009551 Ga0105238_10022004 Ga0105238_100220048 384
55 3300025924 Ga0207694_10030829 Ga0207694_100308294 384
56 3300049568 Ga0501031_0000331 Ga0501031_0000331_24682_25872 385
57 3300049569 Ga0501032_0066207 Ga0501032_0066207_583_1773 385
58 3300049570 Ga0501033_0011186 Ga0501033_0011186_390_1580 385
59 3300049822 Ga0501035_0021670 Ga0501035_0021670_2847_4037 385
60 3300049823 Ga0501044_0066677 Ga0501044_0066677_390_1580 385
61 3300028800 Ga0265338_10000038 Ga0265338_1000003892 389
62 3300006847 Ga0075431_100091433 Ga0075431_1000914333 393
63 3300050510 nmdc:mga06r32_33848_c1 nmdc:mga06r32_33848_c1_2643_3824 393
64 3300005330 Ga0070690_100058551 Ga0070690_1000585513 394
65 3300005340 Ga0070689_100078804 Ga0070689_1000788041 394
66 3300005340 Ga0070689_100100712 Ga0070689_1001007122 394
67 3300005617 Ga0068859_100046268 Ga0068859_1000462686 394
68 3300005617 Ga0068859_100205639 Ga0068859_1002056392 394
69 3300005841 Ga0068863_100015459 Ga0068863_1000154597 394
70 3300006880 Ga0075429_100149856 Ga0075429_1001498562 394
71 3300006931 Ga0097620_100046268 Ga0097620_1000462686 394
72 3300006931 Ga0097620_100205644 Ga0097620_1002056441 394
73 3300009094 Ga0111539_10077719 Ga0111539_100777196 394
74 3300025936 Ga0207670_10001647 Ga0207670_1000164713 394
75 3300025936 Ga0207670_10094208 Ga0207670_100942082 394
76 3300026088 Ga0207641_10010394 Ga0207641_100103947 394
77 3300026088 Ga0207641_10054129 Ga0207641_100541292 394
78 3300035691 Ga0373931_0093308 Ga0373931_0093308_175_1359 394
79 3300046517 Ga0495630_0103257 Ga0495630_0103257_310_1494 394
80 3300050508 nmdc:mga09592_158532_c1 nmdc:mga09592_158532_c1_148_1341 394
81 3300050511 nmdc:mga08y16_122634_c1 nmdc:mga08y16_122634_c1_216_1400 394
82 3300025925 Ga0207650_10083829 Ga0207650_100838291 395
83 3300031251 Ga0265327_10003813 Ga0265327_100038134 395
84 3300046689 Ga0495613_0115763 Ga0495613_0115763_393_1583 395
85 3300047322 Ga0495680_0164564 Ga0495680_0164564_369_1559 395
86 3300047444 Ga0495675_0027417 Ga0495675_0027417_1409_2599 395
87 3300048910 Ga0496107_0139720 Ga0496107_0139720_488_1678 395
88 3300005456 Ga0070678_100320770 Ga0070678_1003207701 396
89 3300009093 Ga0105240_10058387 Ga0105240_100583871 396
90 3300025913 Ga0207695_10060170 Ga0207695_100601701 396
91 3300028654 Ga0265322_10009106 Ga0265322_100091064 396
92 3300028800 Ga0265338_10001139 Ga0265338_100011399 396
93 3300028800 Ga0265338_10026125 Ga0265338_100261256 396
94 3300028800 Ga0265338_10039609 Ga0265338_100396096 396
95 3300029957 Ga0265324_10000911 Ga0265324_100009116 396
96 3300029957 Ga0265324_10017140 Ga0265324_100171404 396
97 3300031241 Ga0265325_10009792 Ga0265325_100097927 396
98 3300031250 Ga0265331_10060154 Ga0265331_100601542 396
99 3300031251 Ga0265327_10004267 Ga0265327_1000426712 396
100 3300031344 Ga0265316_10135271 Ga0265316_101352712 396
101 3300031712 Ga0265342_10072823 Ga0265342_100728233 396
102 3300037068 Ga0373925_0020562 Ga0373925_0020562_1311_2501 396
103 3300042876 Ga0451577_0116078 Ga0451577_0116078_48_1238 396
104 3300031238 Ga0265332_10027937 Ga0265332_100279371 397
105 3300031239 Ga0265328_10044848 Ga0265328_100448481 397
106 3300031242 Ga0265329_10000980 Ga0265329_100009807 397
107 3300031711 Ga0265314_10000142 Ga0265314_1000014271 397
108 3300009093 Ga0105240_10046945 Ga0105240_100469454 399
109 3300044712 Ga0453684_0031228 Ga0453684_0031228_4601_5803 400
110 3300035398 Ga0316574_0117659 Ga0316574_0117659_51_1259 402
111 3300044712 Ga0453684_0006457 Ga0453684_0006457_8114_9322 402
112 3300005343 Ga0070687_100007542 Ga0070687_1000075424 403
113 3300005438 Ga0070701_10002740 Ga0070701_100027407 403
114 3300005544 Ga0070686_100003979 Ga0070686_1000039796 403
115 3300005549 Ga0070704_100007297 Ga0070704_1000072977 403
116 3300005617 Ga0068859_100099477 Ga0068859_1000994771 403
117 3300006931 Ga0097620_100099479 Ga0097620_1000994795 403
118 3300025918 Ga0207662_10024943 Ga0207662_100249434 403
119 3300045051 Ga0451576_0166978 Ga0451576_0166978_58_1269 403
120 3300005577 Ga0068857_100001400 Ga0068857_1000014006 409
121 3300026116 Ga0207674_10012252 Ga0207674_100122529 409
122 3300045051 Ga0451576_0047425 Ga0451576_0047425_1998_3227 409
123 3300046543 Ga0495645_0030193 Ga0495645_0030193_2429_3658 409
124 3300045051 Ga0451576_0089613 Ga0451576_0089613_1043_2350 410
125 3300042876 Ga0451577_0001129 Ga0451577_0001129_16175_17410 411
126 3300044712 Ga0453684_0001721 Ga0453684_0001721_17800_19035 411
127 3300009093 Ga0105240_10007881 Ga0105240_1000788112 413
128 3300025913 Ga0207695_10038097 Ga0207695_100380975 413
129 3300013104 Ga0157370_10105381 Ga0157370_101053813 414
130 3300048918 Ga0496115_0003749 Ga0496115_0003749_6301_7545 414
131 3300009093 Ga0105240_10236457 Ga0105240_102364571 417
132 3300046517 Ga0495630_0000019 Ga0495630_0000019_122808_124085 417
133 3300046535 Ga0495586_0000442 Ga0495586_0000442_4153_5430 417
134 3300046683 Ga0495658_0020365 Ga0495658_0020365_418_1695 417
135 3300047319 Ga0495674_0000154 Ga0495674_0000154_37974_39251 417
136 3300006175 Ga0070712_100151307 Ga0070712_1001513071 418
137 3300009176 Ga0105242_10139561 Ga0105242_101395612 418
138 3300035692 Ga0373935_0109824 Ga0373935_0109824_455_1723 418
139 3300035725 Ga0373947_0029831 Ga0373947_0029831_1018_2286 418
140 3300037068 Ga0373925_0004386 Ga0373925_0004386_8735_10003 418
141 3300046517 Ga0495630_0014593 Ga0495630_0014593_1269_2573 418
142 3300046526 Ga0495666_0023235 Ga0495666_0023235_1008_2276 418
143 3300047321 Ga0495676_0062465 Ga0495676_0062465_1438_2694 418
144 3300049570 Ga0501033_0088371 Ga0501033_0088371_58_1314 418
145 3300009098 Ga0105245_10255983 Ga0105245_102559832 419
146 3300013308 Ga0157375_10000068 Ga0157375_1000006844 420
147 3300005563 Ga0068855_100164080 Ga0068855_1001640803 421
148 3300025924 Ga0207694_10013226 Ga0207694_100132264 421
149 3300028800 Ga0265338_10002771 Ga0265338_1000277125 421
150 3300046462 Ga0495651_0025778 Ga0495651_0025778_2371_3720 421
151 3300014325 Ga0163163_10000091 Ga0163163_1000009161 422
152 3300005329 Ga0070683_100219214 Ga0070683_1002192142 423

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00871

Acetate_kinase

Acetokinase family

30

385

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4dq8-assembly1.cif.gz_A crystal structure of acetate kinase acka from mycobacterium marinum 0.9177 2 391
4dq8-assembly1.cif.gz_B crystal structure of acetate kinase acka from mycobacterium marinum 0.9114 2 390
3r9p-assembly1.cif.gz_B-2 crystal structure of acka from mycobacterium paratuberculosis atcc baa-968 / k-10 0.9099 2 391
4ijn-assembly1.cif.gz_B crystal structure of an acetate kinase from mycobacterium smegmatis bound to amp and sulfate 0.9096 1 386
4dq8-assembly1.cif.gz_A crystal structure of acetate kinase acka from mycobacterium marinum 0.9083 2 391
ID Description Score Start End Superfamily
2iirA02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9435 196 391 3.30.420.40
3khyB02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9119 193 390 3.30.420.40
3khyB02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.9026 193 390 3.30.420.40
2iirA02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8994 196 391 3.30.420.40
4h0oB02 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;ATPase, nucleotide binding domain 0.8973 196 392 3.30.420.40
ID Description Score Start End GO Terms
AF-A0A2D5MM96-F1-model_v4 Acetate kinase 0.9747 1 117 GO:0005524
GO:0006083
GO:0008776
GO:0047761
AF-A0A3M1CUI3-F1-model_v4 Acetate kinase 0.9716 277 397 GO:0006083
GO:0008776
AF-A0A3C1UUB5-F1-model_v4 Acetate kinase 0.9683 144 394 GO:0005737
GO:0006083
GO:0008776
AF-A0A348S047-F1-model_v4 Acetate kinase 0.9679 1 223 GO:0005524
GO:0006083
GO:0008776
GO:0047761
AF-A0A2D5MM96-F1-model_v4 Acetate kinase 0.9666 1 117 GO:0005524
GO:0006083
GO:0008776
GO:0047761

Feature Viewer

pLDDT pTM Quality
87.67 0.87 High
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Predicted Structure (AlphaFold2)

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