F215075

General Info

Members Datasets Scaffolds Average Seq Length
152 85 132 307

Family's Representative Sequence

Representative Sequence 3300044658|Ga0466972_0045155|Ga0466972_0045155_660_1652
Length 330
Sequence MVTGALCPDSRQVPKNKFSFKYQIMILKTENLSHKYSSTWAIRDINIEISQPGIIGLLGSNGAGKSTTMNIICGTLNQTQGNVYINDIDLRKDPETAKREIGFLPQTPPLYTDLTIDEYLTYCAHLRLMKKETIKPAIEEAKERCGITHFSSRLIRNLSGGYRQRVGIAQAIIHKPKLVVMDEPTNGLDPNQLIEARKLIRDISTEHTVLLSSHILSEISLLCREIIMIESGRIVFSDSMEAFNNYTQKRTIIMQMEAPPDKAELMKVKGVTQAEFLTGKQVRIYFDGDQEVTERLIAASIANNWRLQEIGYDKGLLDDIFKQLSTQAAR

Samples

Sample ID Description Type Environment
1 2738541283 Pedobacter sp. OK701 Isolate Unclassified
2 2738543023 Pedobacter sp. OK628 Isolate Unclassified
3 2818991437 Pedobacter terrae 518 Isolate Unclassified
4 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
5 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
6 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
7 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
8 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
9 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
10 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
11 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
36 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
37 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
54 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
55 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
56 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
57 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
58 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
59 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
60 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
61 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
62 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
63 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
64 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
65 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
66 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
67 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
68 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
69 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
70 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
71 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
72 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
73 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
74 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
75 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
76 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
77 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
78 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
79 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
80 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
81 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
82 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
83 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
84 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
85 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.47
Metatranscriptomes 0
Isolates 10.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.84
Nodule 0
Rhizoplane 0
Rhizosphere 69.08
Stem 0
Stem Tuber 0
Unclassified 19.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10018880 3300003320 Bacteria 6647
2 rootH2_10020736 3300003320 Bacteria 17978
3 rootH2_10039086 3300003320 Bacteria 26346
4 rootH2_10208462 3300003320 Bacteria 2466
5 rootH1_10013818 3300003323 Bacteria 18258
6 rootH1_10041495 3300003323 Bacteria 2942
7 rootH1_10052641 3300003323 Bacteria 3345
8 rootH1_10101412 3300003323 Bacteria 5581
9 rootH1_10131495 3300003323 Bacteria 10385
10 Ga0065714_10066216 3300005288 Bacteria 7336
11 Ga0065714_10075032 3300005288 Bacteria 2949
12 Ga0065714_10136248 3300005288 Bacteria 1207
13 Ga0070675_100081922 3300005354 Bacteria 2692
14 Ga0070674_100084519 3300005356 Unclassified 2276
15 Ga0068867_100015953 3300005459 Bacteria 5332
16 Ga0068853_100086689 3300005539 Bacteria 2746
17 Ga0070665_100000016 3300005548 Bacteria 451538
18 Ga0068856_100235371 3300005614 Bacteria 1847
19 Ga0068852_100149558 3300005616 Bacteria 2170
20 Ga0068861_100165155 3300005719 Bacteria 1830
21 Ga0068870_10110819 3300005840 Bacteria 1567
22 Ga0068860_100000618 3300005843 Bacteria 42016
23 Ga0068860_100021007 3300005843 Bacteria 6326
24 Ga0105240_10001521 3300009093 Bacteria 39426
25 Ga0105241_10002153 3300009174 Bacteria 14836
26 Ga0105237_10000088 3300009545 Bacteria 124518
27 Ga0105238_10003119 3300009551 Bacteria 16533
28 Ga0105239_10054179 3300010375 Bacteria 4398
29 Ga0157373_10011344 3300013100 Bacteria 6554
30 Ga0157371_10000113 3300013102 Bacteria 122461
31 Ga0157370_10009127 3300013104 Bacteria 10635
32 Ga0157370_10060932 3300013104 Bacteria 3581
33 Ga0157378_10341913 3300013297 Bacteria 1459
34 Ga0163162_10000704 3300013306 Bacteria 30930
35 Ga0163162_10010646 3300013306 Bacteria 8944
36 Ga0157372_10036186 3300013307 Bacteria 5441
37 Ga0182008_10000053 3300014497 Bacteria 102934
38 Ga0182008_10000217 3300014497 Bacteria 45137
39 Ga0182008_10000286 3300014497 Bacteria 39644
40 Ga0182008_10002590 3300014497 Bacteria 11232
41 Ga0182006_1000202 3300015261 Bacteria 61447
42 Ga0182006_1000280 3300015261 Bacteria 45082
43 Ga0163161_10001890 3300017792 Bacteria 15284
44 Ga0163161_10008319 3300017792 Bacteria 7184
45 Ga0207643_10156145 3300025908 Bacteria 1370
46 Ga0207654_10004532 3300025911 Bacteria 7021
47 Ga0207654_10016803 3300025911 Bacteria 3816
48 Ga0207695_10157300 3300025913 Bacteria 2207
49 Ga0207671_10001662 3300025914 Bacteria 25292
50 Ga0207671_10004012 3300025914 Bacteria 14305
51 Ga0207694_10004357 3300025924 Bacteria 11059
52 Ga0207669_10136267 3300025937 Bacteria 1696
53 Ga0207689_10007022 3300025942 Bacteria 9901
54 Ga0207658_10217564 3300025986 Bacteria 1605
55 Ga0207677_10132524 3300026023 Bacteria 1895
56 Ga0207677_10522443 3300026023 Bacteria 1030
57 Ga0207639_10487730 3300026041 Bacteria 1124
58 Ga0207648_10001807 3300026089 Bacteria 23447
59 Ga0207675_100101602 3300026118 Bacteria 2709
60 Ga0268266_10000034 3300028379 Bacteria 354251
61 Ga0268266_10000102 3300028379 Bacteria 179754
62 Ga0268264_10000105 3300028381 Bacteria 212531
63 Ga0268264_10000117 3300028381 Bacteria 195037
64 Ga0268264_10049232 3300028381 Bacteria 3505
65 Ga0307517_10037757 3300028786 Bacteria 5379
66 Ga0307513_10010328 3300031456 Bacteria 11709
67 Ga0307509_10124950 3300031507 Bacteria 2541
68 Ga0307508_10075586 3300031616 Bacteria 2946
69 Ga0307414_10024209 3300032004 Bacteria 3867
70 Ga0307414_10068779 3300032004 Bacteria 2543
71 Ga0373927_0105040 3300035695 Bacteria 1839
72 Ga0439439_0014914 3300041406 Bacteria 1895
73 Ga0439457_001974 3300042014 Bacteria 6031
74 Ga0466972_0023744 3300044658 Bacteria 3048
75 Ga0466972_0045155 3300044658 Bacteria 2136
76 Ga0466972_0081800 3300044658 Bacteria 1537
77 Ga0466959_0002846 3300045049 Bacteria 11153
78 Ga0466959_0034474 3300045049 Bacteria 3744
79 Ga0495648_0008019 3300046524 Bacteria 8369
80 Ga0495611_0022808 3300046648 Bacteria 2711
81 Ga0495625_0119826 3300046660 Bacteria 1792
82 Ga0495687_020707 3300047443 Bacteria 3201
83 Ga0495686_0136429 3300047472 Bacteria 1451
84 Ga0496122_0002276 3300048925 Bacteria 27777
85 Ga0496122_0005500 3300048925 Bacteria 15069
86 Ga0496123_0002522 3300048926 Bacteria 22489
87 Ga0496125_0014930 3300048928 Bacteria 7543
88 Ga0501219_000006 3300049703 Bacteria 30970
89 Ga0501219_000018 3300049703 Bacteria 25770
90 Ga0501219_000025 3300049703 Bacteria 23540
91 Ga0501219_000081 3300049703 Bacteria 16419
92 Ga0501219_000120 3300049703 Bacteria 13824
93 Ga0501219_000198 3300049703 Bacteria 11156
94 Ga0501219_000204 3300049703 Bacteria 11100
95 Ga0501219_000206 3300049703 Bacteria 11077
96 Ga0501219_000229 3300049703 Bacteria 10702
97 Ga0501219_000232 3300049703 Bacteria 10602
98 Ga0501219_000505 3300049703 Bacteria 5986
99 Ga0501225_0028215 3300049705 Bacteria 1543
100 Ga0501241_001922 3300049758 Bacteria 4085
101 Ga0501241_005706 3300049758 Bacteria 2313
102 Ga0501241_008677 3300049758 Bacteria 1855
103 Ga0501284_00004 3300050005 Bacteria 211793
104 Ga0501284_00008 3300050005 Bacteria 143517
105 Ga0501284_00009 3300050005 Bacteria 142855
106 Ga0501284_00010 3300050005 Bacteria 136120
107 Ga0501284_00011 3300050005 Bacteria 131008
108 Ga0501284_00019 3300050005 Bacteria 92576
109 Ga0501284_00022 3300050005 Bacteria 89450
110 Ga0501284_00043 3300050005 Bacteria 49961
111 Ga0501284_00062 3300050005 Bacteria 37409
112 Ga0501284_00067 3300050005 Bacteria 31860
113 Ga0501284_00075 3300050005 Bacteria 28010
114 Ga0501284_00095 3300050005 Bacteria 19199
115 Ga0500644_0001620 3300053088 Bacteria 5870
116 Ga0500646_0045998 3300053090 Bacteria 1244
117 Ga0500583_0000033 3300053092 Bacteria 99894
118 Ga0500583_0004662 3300053092 Bacteria 4500
119 Ga0500583_0011635 3300053092 Bacteria 3326
120 Ga0500562_000008 3300053108 Bacteria 188332
121 Ga0500562_000035 3300053108 Bacteria 81116
122 Ga0500568_0012772 3300053139 Bacteria 3852
123 Ga0500568_0020594 3300053139 Unclassified 2850
124 Ga0500603_016763 3300053150 Bacteria 1743
125 Ga0500604_0005527 3300053151 Bacteria 3338
126 Ga0500616_0074051 3300053153 Bacteria 1727
127 Ga0500622_0000519 3300053156 Bacteria 35764
128 Ga0500622_0001204 3300053156 Bacteria 21264
129 Ga0500622_0006012 3300053156 Bacteria 7131
130 Ga0500622_0023714 3300053156 Bacteria 3249
131 Ga0500645_013156 3300053730 Bacteria 2662
132 Ga0500661_006766 3300055283 Bacteria 2132

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049703 Ga0501219_000505 Ga0501219_000505_2667_3509 280
2 3300009545 Ga0105237_10000088 Ga0105237_1000008811 283
3 3300014497 Ga0182008_10000053 Ga0182008_100000538 283
4 3300015261 Ga0182006_1000280 Ga0182006_100028020 283
5 3300025914 Ga0207671_10001662 Ga0207671_100016623 283
6 3300003323 rootH1_10041495 rootH1_100414952 289
7 3300009545 Ga0105237_10000088 Ga0105237_1000008821 289
8 3300014497 Ga0182008_10002590 Ga0182008_100025906 289
9 3300015261 Ga0182006_1000280 Ga0182006_100028011 289
10 3300017792 Ga0163161_10008319 Ga0163161_100083194 289
11 3300025914 Ga0207671_10001662 Ga0207671_1000166213 289
12 3300003323 rootH1_10101412 rootH1_101014122 298
13 3300003320 rootH2_10208462 rootH2_102084623 300
14 iso_pu_bacteria 2818991460 2819678641 301
15 iso_pu_bacteria 2738541283 2738755990 303
16 iso_pu_bacteria 2738541283 2738756000 303
17 iso_pu_bacteria 2738543023 2739300270 303
18 iso_pu_bacteria 2738543023 2739305420 303
19 iso_pu_bacteria 2818991437 2819546959 303
20 iso_pu_bacteria 2919186247 2919188653 303
21 iso_pu_bacteria 2939664404 2939667192 303
22 iso_pu_bacteria 2738541283 2738754944 304
23 iso_pu_bacteria 2818991460 2819679220 304
24 iso_pu_bacteria 2884791551 2884793807 304
25 iso_pu_bacteria 2929154850 2929155557 304
26 iso_pu_bacteria 2929177148 2929180193 304
27 iso_pu_bacteria 2945977869 2945982597 304
28 iso_pu_bacteria 2946013367 2946018007 304
29 3300047472 Ga0495686_0136429 Ga0495686_0136429_62_982 305
30 3300049703 Ga0501219_000006 Ga0501219_000006_22964_23881 305
31 3300049703 Ga0501219_000081 Ga0501219_000081_13386_14303 305
32 3300050005 Ga0501284_00019 Ga0501284_00019_61977_62894 305
33 3300050005 Ga0501284_00062 Ga0501284_00062_703_1620 305
34 3300053139 Ga0500568_0012772 Ga0500568_0012772_2554_3471 305
35 iso_pu_bacteria 2929154850 2929158702 305
36 3300003320 rootH2_10020736 rootH2_100207369 306
37 3300032004 Ga0307414_10068779 Ga0307414_100687792 306
38 3300044658 Ga0466972_0081800 Ga0466972_0081800_496_1419 306
39 3300049703 Ga0501219_000198 Ga0501219_000198_5206_6126 306
40 3300049703 Ga0501219_000229 Ga0501219_000229_6636_7556 306
41 3300049705 Ga0501225_0028215 Ga0501225_0028215_336_1256 306
42 3300049758 Ga0501241_005706 Ga0501241_005706_571_1491 306
43 3300050005 Ga0501284_00008 Ga0501284_00008_6736_7656 306
44 3300050005 Ga0501284_00022 Ga0501284_00022_14281_15201 306
45 3300005288 Ga0065714_10066216 Ga0065714_100662164 307
46 3300005288 Ga0065714_10075032 Ga0065714_100750322 307
47 3300005288 Ga0065714_10136248 Ga0065714_101362482 307
48 3300013100 Ga0157373_10011344 Ga0157373_100113444 307
49 3300013102 Ga0157371_10000113 Ga0157371_1000011345 307
50 3300013104 Ga0157370_10009127 Ga0157370_100091272 307
51 3300013104 Ga0157370_10060932 Ga0157370_100609323 307
52 3300013306 Ga0163162_10000704 Ga0163162_1000070420 307
53 3300014497 Ga0182008_10000286 Ga0182008_100002862 307
54 3300032004 Ga0307414_10024209 Ga0307414_100242092 307
55 3300048925 Ga0496122_0005500 Ga0496122_0005500_8392_9315 307
56 3300048926 Ga0496123_0002522 Ga0496123_0002522_15327_16250 307
57 3300048928 Ga0496125_0014930 Ga0496125_0014930_484_1407 307
58 3300049703 Ga0501219_000120 Ga0501219_000120_1737_2660 307
59 3300049758 Ga0501241_001922 Ga0501241_001922_1354_2277 307
60 3300050005 Ga0501284_00004 Ga0501284_00004_120012_120935 307
61 3300050005 Ga0501284_00011 Ga0501284_00011_31925_32848 307
62 3300050005 Ga0501284_00075 Ga0501284_00075_18293_19216 307
63 3300053092 Ga0500583_0004662 Ga0500583_0004662_48_971 307
64 3300053151 Ga0500604_0005527 Ga0500604_0005527_1489_2412 307
65 3300053156 Ga0500622_0001204 Ga0500622_0001204_12160_13083 307
66 3300003320 rootH2_10018880 rootH2_100188804 308
67 3300003320 rootH2_10039086 rootH2_1003908611 308
68 3300003323 rootH1_10013818 rootH1_100138188 308
69 3300003323 rootH1_10052641 rootH1_100526412 308
70 3300003323 rootH1_10131495 rootH1_101314952 308
71 3300005354 Ga0070675_100081922 Ga0070675_1000819222 308
72 3300005356 Ga0070674_100084519 Ga0070674_1000845192 308
73 3300005459 Ga0068867_100015953 Ga0068867_1000159534 308
74 3300005539 Ga0068853_100086689 Ga0068853_1000866892 308
75 3300005548 Ga0070665_100000016 Ga0070665_100000016256 308
76 3300005614 Ga0068856_100235371 Ga0068856_1002353712 308
77 3300005616 Ga0068852_100149558 Ga0068852_1001495582 308
78 3300005719 Ga0068861_100165155 Ga0068861_1001651552 308
79 3300005840 Ga0068870_10110819 Ga0068870_101108192 308
80 3300005843 Ga0068860_100000618 Ga0068860_10000061811 308
81 3300005843 Ga0068860_100021007 Ga0068860_1000210073 308
82 3300009093 Ga0105240_10001521 Ga0105240_1000152119 308
83 3300009174 Ga0105241_10002153 Ga0105241_100021534 308
84 3300009551 Ga0105238_10003119 Ga0105238_100031196 308
85 3300010375 Ga0105239_10054179 Ga0105239_100541791 308
86 3300013297 Ga0157378_10341913 Ga0157378_103419132 308
87 3300013306 Ga0163162_10010646 Ga0163162_100106467 308
88 3300013307 Ga0157372_10036186 Ga0157372_100361864 308
89 3300014497 Ga0182008_10000217 Ga0182008_100002177 308
90 3300015261 Ga0182006_1000202 Ga0182006_100020227 308
91 3300017792 Ga0163161_10001890 Ga0163161_100018908 308
92 3300025908 Ga0207643_10156145 Ga0207643_101561452 308
93 3300025911 Ga0207654_10004532 Ga0207654_100045323 308
94 3300025911 Ga0207654_10016803 Ga0207654_100168034 308
95 3300025913 Ga0207695_10157300 Ga0207695_101573002 308
96 3300025914 Ga0207671_10004012 Ga0207671_100040128 308
97 3300025924 Ga0207694_10004357 Ga0207694_100043577 308
98 3300025937 Ga0207669_10136267 Ga0207669_101362673 308
99 3300025942 Ga0207689_10007022 Ga0207689_100070227 308
100 3300025986 Ga0207658_10217564 Ga0207658_102175641 308
101 3300026023 Ga0207677_10132524 Ga0207677_101325242 308
102 3300026023 Ga0207677_10522443 Ga0207677_105224431 308
103 3300026041 Ga0207639_10487730 Ga0207639_104877301 308
104 3300026089 Ga0207648_10001807 Ga0207648_1000180711 308
105 3300026118 Ga0207675_100101602 Ga0207675_1001016023 308
106 3300028379 Ga0268266_10000034 Ga0268266_10000034125 308
107 3300028379 Ga0268266_10000102 Ga0268266_10000102119 308
108 3300028381 Ga0268264_10000105 Ga0268264_1000010526 308
109 3300028381 Ga0268264_10000117 Ga0268264_10000117103 308
110 3300028381 Ga0268264_10049232 Ga0268264_100492322 308
111 3300028786 Ga0307517_10037757 Ga0307517_100377573 308
112 3300031456 Ga0307513_10010328 Ga0307513_100103286 308
113 3300031507 Ga0307509_10124950 Ga0307509_101249502 308
114 3300031616 Ga0307508_10075586 Ga0307508_100755862 308
115 3300035695 Ga0373927_0105040 Ga0373927_0105040_824_1750 308
116 3300041406 Ga0439439_0014914 Ga0439439_0014914_114_1040 308
117 3300042014 Ga0439457_001974 Ga0439457_001974_903_1829 308
118 3300044658 Ga0466972_0023744 Ga0466972_0023744_80_1006 308
119 3300044658 Ga0466972_0045155 Ga0466972_0045155_660_1652 308
120 3300045049 Ga0466959_0002846 Ga0466959_0002846_2226_3218 308
121 3300045049 Ga0466959_0034474 Ga0466959_0034474_1642_2571 308
122 3300046524 Ga0495648_0008019 Ga0495648_0008019_931_1857 308
123 3300046648 Ga0495611_0022808 Ga0495611_0022808_730_1656 308
124 3300046660 Ga0495625_0119826 Ga0495625_0119826_17_943 308
125 3300047443 Ga0495687_020707 Ga0495687_020707_2035_2961 308
126 3300048925 Ga0496122_0002276 Ga0496122_0002276_25460_26389 308
127 3300049703 Ga0501219_000018 Ga0501219_000018_8080_9006 308
128 3300049703 Ga0501219_000025 Ga0501219_000025_21061_22029 308
129 3300049703 Ga0501219_000204 Ga0501219_000204_8530_9456 308
130 3300049703 Ga0501219_000206 Ga0501219_000206_9451_10377 308
131 3300049703 Ga0501219_000232 Ga0501219_000232_1265_2191 308
132 3300049758 Ga0501241_008677 Ga0501241_008677_871_1797 308
133 3300050005 Ga0501284_00004 Ga0501284_00004_79440_80366 308
134 3300050005 Ga0501284_00009 Ga0501284_00009_35030_35998 308
135 3300050005 Ga0501284_00010 Ga0501284_00010_114050_114976 308
136 3300050005 Ga0501284_00043 Ga0501284_00043_24545_25471 308
137 3300050005 Ga0501284_00067 Ga0501284_00067_22215_23141 308
138 3300050005 Ga0501284_00095 Ga0501284_00095_736_1668 308
139 3300053088 Ga0500644_0001620 Ga0500644_0001620_2680_3612 308
140 3300053090 Ga0500646_0045998 Ga0500646_0045998_213_1145 308
141 3300053092 Ga0500583_0000033 Ga0500583_0000033_74735_75661 308
142 3300053092 Ga0500583_0011635 Ga0500583_0011635_978_1904 308
143 3300053108 Ga0500562_000008 Ga0500562_000008_161230_162162 308
144 3300053108 Ga0500562_000035 Ga0500562_000035_48407_49333 308
145 3300053139 Ga0500568_0020594 Ga0500568_0020594_1641_2834 308
146 3300053150 Ga0500603_016763 Ga0500603_016763_507_1433 308
147 3300053153 Ga0500616_0074051 Ga0500616_0074051_28_954 308
148 3300053156 Ga0500622_0000519 Ga0500622_0000519_21970_22902 308
149 3300053156 Ga0500622_0006012 Ga0500622_0006012_4152_5078 308
150 3300053156 Ga0500622_0023714 Ga0500622_0023714_1381_2307 308
151 3300053730 Ga0500645_013156 Ga0500645_013156_158_1084 308
152 3300055283 Ga0500661_006766 Ga0500661_006766_348_1274 308

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

42

186

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
8bms-assembly1.cif.gz_B cryo-em structure of the mutant solitary ecf module 2eq in msp2n2 lipid nanodiscs in the atpase closed and atp-bound conformation 0.8831 5 218
8eop-assembly1.cif.gz_A cryo-em structure of nanodisc reconstituted human abca7 eq mutant in atp bound closed state 0.8789 2 217
7v8i-assembly1.cif.gz_F lolcd(e171q)e with bound amppnp in nanodiscs 0.8765 1 215
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.8756 5 214
4p33-assembly1.cif.gz_A crystal structure of e. coli lptb-e163q in complex with atp-sodium 0.8729 5 214
ID Description Score Start End Superfamily
af_A0A1D6P1I8_181_285_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9226 5 69 3.40.50.300
af_Q0E8Q7_1247_1483_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9087 1 221 3.40.50.300
af_Q9VRG3_531_774_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9062 3 221 3.40.50.300
af_A4HV32_726_961_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9009 2 219 3.40.50.300
af_Q9VDR4_1380_1622_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8979 2 222 3.40.50.300
ID Description Score Start End GO Terms
AF-E6SCH1-F1-model_v4 ABC transporter related protein 0.9059 2 219 GO:0005524
GO:0016887
GO:0046677
AF-A0A7X7K1P0-F1-model_v4 ABC transporter ATP-binding protein 0.8909 1 222 GO:0005524
GO:0016887
AF-A0A6I3RIS9-F1-model_v4 deleted 0.8902 2 218
AF-A0A849ZLC9-F1-model_v4 ABC transporter ATP-binding protein 0.8869 1 221 GO:0005524
GO:0016887
AF-A0A2N9NVS2-F1-model_v4 ABC transporter-related protein 0.8855 5 221 GO:0005524
GO:0016887

Feature Viewer

pLDDT pTM Quality
86.49 0.73 High
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Predicted Structure (AlphaFold2)

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