F214942
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 152 | 101 | 304 | 317 |
Family's Representative Sequence
| Representative Sequence | 3300037853|Ga0436364_0723447|Ga0436364_0723447_396_1502 |
| Length | 368 |
| Sequence | MGRAPAGVARHVQAQVVLALGRRRLAETRRPEQPNMNHSFSPDKTEASGLVTPPTLERWLTGPRFAGLPAPADGQTPPLLSFEFFPPKTEALEQQLWACIRRLEPLRPRFVSVTYGAGGSTQARTHATVARMLRETSLTPAAHLTCVGASRESVDAVARSYWEAGVRHIVALRGDAPAGSRYEPHADGYPFAADLVAGLRRVADFEVSVAAYPETHPTALSPDHDLDNLKRKLDAGATRAITQYFFDASVFLRFLDKCLAAGITASIVPGIMPVSNYAQAAKFSAMCGASVPAWLGRMFEGTEEDPEIRRMVAAVVAAEQVRLLQANGVDEFHFYTLNRPDLTYAIAHILGVRPAAATAGTPAAAGTG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 2 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 3 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 4 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 6 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 8 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 9 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 10 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 11 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 12 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 13 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 17 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 20 | 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Metagenome | Rhizosphere |
| 21 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 22 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 23 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 24 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 25 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 26 | 3300021377 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 | Metagenome | Unclassified |
| 27 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 28 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 29 | 3300021441 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 | Metagenome | Rhizosphere |
| 30 | 3300025291 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 31 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300025917 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 42 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 43 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 44 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 45 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 46 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 47 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 48 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 49 | 3300035172 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 | Metagenome | Rhizosphere |
| 50 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 51 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 52 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 53 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 54 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 55 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 56 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 57 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 58 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 59 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 60 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 61 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 62 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 63 | 3300046462 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere | Metagenome | Rhizosphere |
| 64 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 65 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 66 | 3300046476 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere | Metagenome | Rhizosphere |
| 67 | 3300046477 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere | Metagenome | Rhizosphere |
| 68 | 3300046511 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere | Metagenome | Rhizosphere |
| 69 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 70 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046529 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046536 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 76 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 77 | 3300046675 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere | Metagenome | Rhizosphere |
| 78 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 79 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 80 | 3300047317 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere | Metagenome | Rhizosphere |
| 81 | 3300047444 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere | Metagenome | Rhizosphere |
| 82 | 3300047471 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere | Metagenome | Rhizosphere |
| 83 | 3300048088 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere | Metagenome | Rhizosphere |
| 84 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 85 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 86 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 87 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 88 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 89 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 90 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 91 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 92 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 93 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300053078 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300053739 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere | Metagenome | Endosphere |
| 98 | 2842775625 | Roseomonas sp. R-71825 | Isolate | Unclassified |
| 99 | 2894772417 | Roseomonas oryzicola KCTC 22478 | Isolate | Rhizosphere |
| 100 | 2929199973 | Roseomonas sp. R-73070 Hybrid assembly | Isolate | Unclassified |
| 101 | 8055909800 | Plastoroseomonas hellenica LMG 31523 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 97.37 |
| Metatranscriptomes | 0 |
| Isolates | 2.63 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.32 |
| Nodule | 0 |
| Rhizoplane | 0 |
| Rhizosphere | 83.55 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 2.63 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0436364_0723447 | 3300037853 | Bacteria | 18695 |
| 2 | JGI25406J46586_10004098 | 3300003203 | Bacteria | 6811 |
| 3 | Ga0070680_100020808 | 3300005336 | Bacteria | 5207 |
| 4 | Ga0070714_100065214 | 3300005435 | Bacteria | 3136 |
| 5 | Ga0070713_100010469 | 3300005436 | Bacteria | 6698 |
| 6 | Ga0070713_100021738 | 3300005436 | Bacteria | 4943 |
| 7 | Ga0070713_100072392 | 3300005436 | Bacteria | 2915 |
| 8 | Ga0070711_100046309 | 3300005439 | Bacteria | 2963 |
| 9 | Ga0070681_10076348 | 3300005458 | Bacteria | 3309 |
| 10 | Ga0070679_100008983 | 3300005530 | Bacteria | 9431 |
| 11 | Ga0070679_100092493 | 3300005530 | Bacteria | 3012 |
| 12 | Ga0070684_100341281 | 3300005535 | Bacteria | 1377 |
| 13 | Ga0068853_100189537 | 3300005539 | Bacteria | 1868 |
| 14 | Ga0068858_100076171 | 3300005842 | Bacteria | 3116 |
| 15 | Ga0081539_10000207 | 3300005985 | Bacteria | 136970 |
| 16 | Ga0070717_10020336 | 3300006028 | Bacteria | 5218 |
| 17 | Ga0070716_100083662 | 3300006173 | Bacteria | 1911 |
| 18 | Ga0070712_100012010 | 3300006175 | Bacteria | 5503 |
| 19 | Ga0105240_10259929 | 3300009093 | Bacteria | 2003 |
| 20 | Ga0105240_10427119 | 3300009093 | Bacteria | 1487 |
| 21 | Ga0105240_10520246 | 3300009093 | Bacteria | 1320 |
| 22 | Ga0105245_10207744 | 3300009098 | Bacteria | 1883 |
| 23 | Ga0105241_10075368 | 3300009174 | Bacteria | 2629 |
| 24 | Ga0105238_10047905 | 3300009551 | Bacteria | 4308 |
| 25 | Ga0099796_10016110 | 3300010159 | Bacteria | 2201 |
| 26 | Ga0105239_10079949 | 3300010375 | Bacteria | 3597 |
| 27 | Ga0163163_10143366 | 3300014325 | Bacteria | 2432 |
| 28 | Ga0182008_10012855 | 3300014497 | Bacteria | 4410 |
| 29 | Ga0157379_10219913 | 3300014968 | Bacteria | 1721 |
| 30 | Ga0213872_10058743 | 3300021361 | Bacteria | 1741 |
| 31 | Ga0213874_10055824 | 3300021377 | Bacteria | 1224 |
| 32 | Ga0213876_10021703 | 3300021384 | Bacteria | 3396 |
| 33 | Ga0213875_10001439 | 3300021388 | Bacteria | 15431 |
| 34 | Ga0213875_10010562 | 3300021388 | Bacteria | 4619 |
| 35 | Ga0213875_10018606 | 3300021388 | Bacteria | 3348 |
| 36 | Ga0213875_10024285 | 3300021388 | Bacteria | 2892 |
| 37 | Ga0213875_10134988 | 3300021388 | Bacteria | 1154 |
| 38 | Ga0213871_10018022 | 3300021441 | Bacteria | 1722 |
| 39 | Ga0213871_10030468 | 3300021441 | Bacteria | 1404 |
| 40 | Ga0213871_10033240 | 3300021441 | Bacteria | 1356 |
| 41 | Ga0209675_1000860 | 3300025291 | Bacteria | 19679 |
| 42 | Ga0207699_10054928 | 3300025906 | Bacteria | 2368 |
| 43 | Ga0207654_10243438 | 3300025911 | Bacteria | 1203 |
| 44 | Ga0207693_10039948 | 3300025915 | Bacteria | 3694 |
| 45 | Ga0207660_10019268 | 3300025917 | Bacteria | 4558 |
| 46 | Ga0207652_10010289 | 3300025921 | Bacteria | 7528 |
| 47 | Ga0207652_10121765 | 3300025921 | Bacteria | 2321 |
| 48 | Ga0207694_10066636 | 3300025924 | Bacteria | 2809 |
| 49 | Ga0207700_10033596 | 3300025928 | Bacteria | 3672 |
| 50 | Ga0207700_10040442 | 3300025928 | Bacteria | 3403 |
| 51 | Ga0207700_10096261 | 3300025928 | Bacteria | 2350 |
| 52 | Ga0207664_10022933 | 3300025929 | Bacteria | 4670 |
| 53 | Ga0207665_10114044 | 3300025939 | Bacteria | 1902 |
| 54 | Ga0207639_10231403 | 3300026041 | Bacteria | 1602 |
| 55 | Ga0265338_10097257 | 3300028800 | Bacteria | 2412 |
| 56 | Ga0265324_10002018 | 3300029957 | Bacteria | 10811 |
| 57 | Ga0265328_10003535 | 3300031239 | Bacteria | 6892 |
| 58 | Ga0265331_10000107 | 3300031250 | Bacteria | 112221 |
| 59 | Ga0265327_10002522 | 3300031251 | Bacteria | 19077 |
| 60 | Ga0265313_10002154 | 3300031595 | Bacteria | 17480 |
| 61 | Ga0373926_0031186 | 3300035083 | Bacteria | 1879 |
| 62 | Ga0373943_0058888 | 3300035170 | Bacteria | 1913 |
| 63 | Ga0373955_0025479 | 3300035172 | Bacteria | 3038 |
| 64 | Ga0373955_0114182 | 3300035172 | Bacteria | 1564 |
| 65 | Ga0373924_0118538 | 3300035410 | Bacteria | 1147 |
| 66 | Ga0373935_0042675 | 3300035692 | Bacteria | 2853 |
| 67 | Ga0373935_0045830 | 3300035692 | Bacteria | 2760 |
| 68 | Ga0373933_0002132 | 3300035724 | Bacteria | 11371 |
| 69 | Ga0373933_0015461 | 3300035724 | Bacteria | 4254 |
| 70 | Ga0373947_0014363 | 3300035725 | Bacteria | 4543 |
| 71 | Ga0373947_0020443 | 3300035725 | Bacteria | 3822 |
| 72 | Ga0373937_0002684 | 3300036401 | Bacteria | 14843 |
| 73 | Ga0373937_0014104 | 3300036401 | Bacteria | 7048 |
| 74 | Ga0373937_0086907 | 3300036401 | Bacteria | 2893 |
| 75 | Ga0373937_0164820 | 3300036401 | Bacteria | 2078 |
| 76 | Ga0373937_0166531 | 3300036401 | Bacteria | 2067 |
| 77 | Ga0373937_0443090 | 3300036401 | Bacteria | 1233 |
| 78 | Ga0395900_0203540 | 3300037418 | Bacteria | 2002 |
| 79 | Ga0436364_0050087 | 3300037853 | Bacteria | 1078 |
| 80 | Ga0436364_0121966 | 3300037853 | Bacteria | 57474 |
| 81 | Ga0436364_0403446 | 3300037853 | Bacteria | 2046 |
| 82 | Ga0436364_1042174 | 3300037853 | Bacteria | 3151 |
| 83 | Ga0436364_1362436 | 3300037853 | Bacteria | 5464 |
| 84 | Ga0436364_1511611 | 3300037853 | Bacteria | 6728 |
| 85 | Ga0436365_1356189 | 3300039437 | Bacteria | 1616 |
| 86 | Ga0436365_1834028 | 3300039437 | Bacteria | 5693 |
| 87 | Ga0436360_0535037 | 3300039438 | Bacteria | 2553 |
| 88 | Ga0436360_0660246 | 3300039438 | Bacteria | 1615 |
| 89 | Ga0436360_0673569 | 3300039438 | Bacteria | 2611 |
| 90 | Ga0436360_0676778 | 3300039438 | Bacteria | 1399 |
| 91 | Ga0436360_0825138 | 3300039438 | Bacteria | 1258 |
| 92 | Ga0436360_1189143 | 3300039438 | Bacteria | 3371 |
| 93 | Ga0436361_0079667 | 3300039447 | Bacteria | 1986 |
| 94 | Ga0436361_0444731 | 3300039447 | Bacteria | 4058 |
| 95 | Ga0436361_0467322 | 3300039447 | Bacteria | 3482 |
| 96 | Ga0436361_0555797 | 3300039447 | Bacteria | 1815 |
| 97 | Ga0436363_1710917 | 3300039450 | Bacteria | 1261 |
| 98 | Ga0466957_0148479 | 3300044842 | Bacteria | 1515 |
| 99 | Ga0451576_0596204 | 3300045051 | Bacteria | 1161 |
| 100 | Ga0495592_0119213 | 3300046454 | Bacteria | 1858 |
| 101 | Ga0495592_0198798 | 3300046454 | Bacteria | 1354 |
| 102 | Ga0495651_0041261 | 3300046462 | Bacteria | 3585 |
| 103 | Ga0495651_0087289 | 3300046462 | Unclassified | 2346 |
| 104 | Ga0495653_0070689 | 3300046463 | Unclassified | 2612 |
| 105 | Ga0495580_0340477 | 3300046472 | Bacteria | 1017 |
| 106 | Ga0495662_0143280 | 3300046476 | Bacteria | 1176 |
| 107 | Ga0495664_0016172 | 3300046477 | Bacteria | 4249 |
| 108 | Ga0495608_0152496 | 3300046511 | Bacteria | 1472 |
| 109 | Ga0495628_0041908 | 3300046516 | Bacteria | 3653 |
| 110 | Ga0495630_0196248 | 3300046517 | Bacteria | 1540 |
| 111 | Ga0495652_0055473 | 3300046529 | Bacteria | 3370 |
| 112 | Ga0495652_0160080 | 3300046529 | Bacteria | 1749 |
| 113 | Ga0495640_0024725 | 3300046533 | Viruses | 4365 |
| 114 | Ga0495640_0222714 | 3300046533 | Bacteria | 1189 |
| 115 | Ga0495587_0008031 | 3300046536 | Bacteria | 6813 |
| 116 | Ga0495645_0001104 | 3300046543 | Bacteria | 18264 |
| 117 | Ga0495645_0038698 | 3300046543 | Bacteria | 3479 |
| 118 | Ga0495667_0002985 | 3300046559 | Bacteria | 11350 |
| 119 | Ga0495667_0087790 | 3300046559 | Unclassified | 2016 |
| 120 | Ga0495635_0045415 | 3300046663 | Bacteria | 3032 |
| 121 | Ga0495657_0038563 | 3300046675 | Bacteria | 3287 |
| 122 | Ga0495599_0021941 | 3300046678 | Bacteria | 3985 |
| 123 | Ga0495600_0116244 | 3300046809 | Bacteria | 1741 |
| 124 | Ga0495604_0088735 | 3300047317 | Bacteria | 2300 |
| 125 | Ga0495675_0017298 | 3300047444 | Bacteria | 4568 |
| 126 | Ga0495684_0008800 | 3300047471 | Bacteria | 7802 |
| 127 | Ga0495684_0068329 | 3300047471 | Bacteria | 2702 |
| 128 | Ga0495602_0004501 | 3300048088 | Bacteria | 14534 |
| 129 | Ga0495602_0150793 | 3300048088 | Bacteria | 1828 |
| 130 | Ga0495602_0157086 | 3300048088 | Bacteria | 1780 |
| 131 | Ga0496119_0013295 | 3300048922 | Bacteria | 6576 |
| 132 | Ga0496120_0035382 | 3300048923 | Bacteria | 2983 |
| 133 | Ga0496126_0113457 | 3300048929 | Unclassified | 2359 |
| 134 | Ga0501033_0044037 | 3300049570 | Bacteria | 3322 |
| 135 | Ga0501037_0012470 | 3300049573 | Bacteria | 6262 |
| 136 | Ga0501043_0321906 | 3300049579 | Bacteria | 1179 |
| 137 | Ga0501047_0145344 | 3300049581 | Bacteria | 2249 |
| 138 | Ga0501047_0175699 | 3300049581 | Bacteria | 2009 |
| 139 | Ga0501083_0008075 | 3300049744 | Bacteria | 7444 |
| 140 | Ga0501044_0215030 | 3300049823 | Bacteria | 1875 |
| 141 | Ga0501044_0215432 | 3300049823 | Bacteria | 1873 |
| 142 | Ga0501044_0288074 | 3300049823 | Bacteria | 1574 |
| 143 | Ga0495601_0002597 | 3300053077 | Bacteria | 10240 |
| 144 | Ga0495601_0034172 | 3300053077 | Bacteria | 3171 |
| 145 | Ga0495612_0000695 | 3300053078 | Bacteria | 13600 |
| 146 | Ga0495595_0023505 | 3300053084 | Bacteria | 2714 |
| 147 | Ga0495619_0066082 | 3300053085 | Bacteria | 2413 |
| 148 | Ga0500587_001660 | 3300053739 | Bacteria | 3163 |
| 149 | 2842775814 | 2842775625 | Bacteria | 5587290 |
| 150 | 2894774872 | 2894772417 | Bacteria | 5305674 |
| 151 | 2929204649 | 2929199973 | Bacteria | 7260745 |
| 152 | 8055913556 | 8055909800 | Bacteria | 7278581 |
| 153 | Ga0436364_0723447 | |||
| 154 | JGI25406J46586_10004098 | |||
| 155 | Ga0070680_100020808 | |||
| 156 | Ga0070714_100065214 | |||
| 157 | Ga0070713_100010469 | |||
| 158 | Ga0070713_100021738 | |||
| 159 | Ga0070713_100072392 | |||
| 160 | Ga0070711_100046309 | |||
| 161 | Ga0070681_10076348 | |||
| 162 | Ga0070679_100008983 | |||
| 163 | Ga0070679_100092493 | |||
| 164 | Ga0070684_100341281 | |||
| 165 | Ga0068853_100189537 | |||
| 166 | Ga0068858_100076171 | |||
| 167 | Ga0081539_10000207 | |||
| 168 | Ga0070717_10020336 | |||
| 169 | Ga0070716_100083662 | |||
| 170 | Ga0070712_100012010 | |||
| 171 | Ga0105240_10259929 | |||
| 172 | Ga0105240_10427119 | |||
| 173 | Ga0105240_10520246 | |||
| 174 | Ga0105245_10207744 | |||
| 175 | Ga0105241_10075368 | |||
| 176 | Ga0105238_10047905 | |||
| 177 | Ga0099796_10016110 | |||
| 178 | Ga0105239_10079949 | |||
| 179 | Ga0163163_10143366 | |||
| 180 | Ga0182008_10012855 | |||
| 181 | Ga0157379_10219913 | |||
| 182 | Ga0213872_10058743 | |||
| 183 | Ga0213874_10055824 | |||
| 184 | Ga0213876_10021703 | |||
| 185 | Ga0213875_10001439 | |||
| 186 | Ga0213875_10010562 | |||
| 187 | Ga0213875_10018606 | |||
| 188 | Ga0213875_10024285 | |||
| 189 | Ga0213875_10134988 | |||
| 190 | Ga0213871_10018022 | |||
| 191 | Ga0213871_10030468 | |||
| 192 | Ga0213871_10033240 | |||
| 193 | Ga0209675_1000860 | |||
| 194 | Ga0207699_10054928 | |||
| 195 | Ga0207654_10243438 | |||
| 196 | Ga0207693_10039948 | |||
| 197 | Ga0207660_10019268 | |||
| 198 | Ga0207652_10010289 | |||
| 199 | Ga0207652_10121765 | |||
| 200 | Ga0207694_10066636 | |||
| 201 | Ga0207700_10033596 | |||
| 202 | Ga0207700_10040442 | |||
| 203 | Ga0207700_10096261 | |||
| 204 | Ga0207664_10022933 | |||
| 205 | Ga0207665_10114044 | |||
| 206 | Ga0207639_10231403 | |||
| 207 | Ga0265338_10097257 | |||
| 208 | Ga0265324_10002018 | |||
| 209 | Ga0265328_10003535 | |||
| 210 | Ga0265331_10000107 | |||
| 211 | Ga0265327_10002522 | |||
| 212 | Ga0265313_10002154 | |||
| 213 | Ga0373926_0031186 | |||
| 214 | Ga0373943_0058888 | |||
| 215 | Ga0373955_0025479 | |||
| 216 | Ga0373955_0114182 | |||
| 217 | Ga0373924_0118538 | |||
| 218 | Ga0373935_0042675 | |||
| 219 | Ga0373935_0045830 | |||
| 220 | Ga0373933_0002132 | |||
| 221 | Ga0373933_0015461 | |||
| 222 | Ga0373947_0014363 | |||
| 223 | Ga0373947_0020443 | |||
| 224 | Ga0373937_0002684 | |||
| 225 | Ga0373937_0014104 | |||
| 226 | Ga0373937_0086907 | |||
| 227 | Ga0373937_0164820 | |||
| 228 | Ga0373937_0166531 | |||
| 229 | Ga0373937_0443090 | |||
| 230 | Ga0395900_0203540 | |||
| 231 | Ga0436364_0050087 | |||
| 232 | Ga0436364_0121966 | |||
| 233 | Ga0436364_0403446 | |||
| 234 | Ga0436364_1042174 | |||
| 235 | Ga0436364_1362436 | |||
| 236 | Ga0436364_1511611 | |||
| 237 | Ga0436365_1356189 | |||
| 238 | Ga0436365_1834028 | |||
| 239 | Ga0436360_0535037 | |||
| 240 | Ga0436360_0660246 | |||
| 241 | Ga0436360_0673569 | |||
| 242 | Ga0436360_0676778 | |||
| 243 | Ga0436360_0825138 | |||
| 244 | Ga0436360_1189143 | |||
| 245 | Ga0436361_0079667 | |||
| 246 | Ga0436361_0444731 | |||
| 247 | Ga0436361_0467322 | |||
| 248 | Ga0436361_0555797 | |||
| 249 | Ga0436363_1710917 | |||
| 250 | Ga0466957_0148479 | |||
| 251 | Ga0451576_0596204 | |||
| 252 | Ga0495592_0119213 | |||
| 253 | Ga0495592_0198798 | |||
| 254 | Ga0495651_0041261 | |||
| 255 | Ga0495651_0087289 | |||
| 256 | Ga0495653_0070689 | |||
| 257 | Ga0495580_0340477 | |||
| 258 | Ga0495662_0143280 | |||
| 259 | Ga0495664_0016172 | |||
| 260 | Ga0495608_0152496 | |||
| 261 | Ga0495628_0041908 | |||
| 262 | Ga0495630_0196248 | |||
| 263 | Ga0495652_0055473 | |||
| 264 | Ga0495652_0160080 | |||
| 265 | Ga0495640_0024725 | |||
| 266 | Ga0495640_0222714 | |||
| 267 | Ga0495587_0008031 | |||
| 268 | Ga0495645_0001104 | |||
| 269 | Ga0495645_0038698 | |||
| 270 | Ga0495667_0002985 | |||
| 271 | Ga0495667_0087790 | |||
| 272 | Ga0495635_0045415 | |||
| 273 | Ga0495657_0038563 | |||
| 274 | Ga0495599_0021941 | |||
| 275 | Ga0495600_0116244 | |||
| 276 | Ga0495604_0088735 | |||
| 277 | Ga0495675_0017298 | |||
| 278 | Ga0495684_0008800 | |||
| 279 | Ga0495684_0068329 | |||
| 280 | Ga0495602_0004501 | |||
| 281 | Ga0495602_0150793 | |||
| 282 | Ga0495602_0157086 | |||
| 283 | Ga0496119_0013295 | |||
| 284 | Ga0496120_0035382 | |||
| 285 | Ga0496126_0113457 | |||
| 286 | Ga0501033_0044037 | |||
| 287 | Ga0501037_0012470 | |||
| 288 | Ga0501043_0321906 | |||
| 289 | Ga0501047_0145344 | |||
| 290 | Ga0501047_0175699 | |||
| 291 | Ga0501083_0008075 | |||
| 292 | Ga0501044_0215030 | |||
| 293 | Ga0501044_0215432 | |||
| 294 | Ga0501044_0288074 | |||
| 295 | Ga0495601_0002597 | |||
| 296 | Ga0495601_0034172 | |||
| 297 | Ga0495612_0000695 | |||
| 298 | Ga0495595_0023505 | |||
| 299 | Ga0495619_0066082 | |||
| 300 | Ga0500587_001660 | |||
| 301 | 2842775814 | |||
| 302 | 2894774872 | |||
| 303 | 2929204649 | |||
| 304 | 8055913556 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1b5t-assembly1.cif.gz_C | escherichia coli methylenetetrahydrofolate reductase | 0.9795 | 34 | 312 |
| 2fmo-assembly1.cif.gz_A | ala177val mutant of e. coli methylenetetrahydrofolate reductase | 0.978 | 34 | 311 |
| 3fst-assembly1.cif.gz_C | crystal structure of escherichia coli methylenetetrahydrofolate reductase mutant phe223leu at ph 7.4 | 0.9762 | 34 | 311 |
| 1zrq-assembly1.cif.gz_C | escherichia coli methylenetetrahydrofolate reductase (reduced) complexed with nadh, ph 6.0 | 0.974 | 34 | 311 |
| 2fmo-assembly1.cif.gz_C | ala177val mutant of e. coli methylenetetrahydrofolate reductase | 0.9734 | 34 | 311 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q75HE6_1_304_3.20.20.220 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel; | 0.9673 | 34 | 309 | 3.20.20.220 |
| 1zp3B00 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel; | 0.9638 | 25 | 311 | 3.20.20.220 |
| af_A0A1D6GER4_1_215_3.20.20.220 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel; | 0.9547 | 105 | 307 | 3.20.20.220 |
| 1v93A00 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel; | 0.9484 | 34 | 312 | 3.20.20.220 |
| 1zp3B00 | Alpha Beta;Alpha-Beta Barrel;TIM Barrel; | 0.9281 | 25 | 311 | 3.20.20.220 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A520WXD6-F1-model_v4 | Methylenetetrahydrofolate reductase | 0.9926 | 104 | 313 |
GO:0005829
GO:0009086 GO:0035999 GO:0071949 GO:0106312 |
| AF-A0A6P5UD17-F1-model_v4 | deleted | 0.9916 | 49 | 258 |
|
| AF-A0A7Y0N2E6-F1-model_v4 | Methylenetetrahydrofolate reductase | 0.9899 | 148 | 289 |
GO:0004489
GO:0005829 GO:0009086 GO:0035999 GO:0071949 |
| AF-A0A2J4RD57-F1-model_v4 | Methylenetetrahydrofolate reductase | 0.9886 | 148 | 312 |
GO:0005829
GO:0009086 GO:0035999 GO:0071949 GO:0106312 |
| AF-A0A379X2T9-F1-model_v4 | Methylenetetrahydrofolate reductase | 0.9886 | 191 | 313 |
GO:0005829
GO:0009086 GO:0035999 GO:0071949 GO:0106312 |