F214487
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 152 | 111 | 304 | 436 |
Family's Representative Sequence
| Representative Sequence | 3300025914|Ga0207671_10059981|Ga0207671_100599812 |
| Length | 455 |
| Sequence | MGCLANTYVLIVPAMQFTTSVLEALAGRFTVVKAPGRSGPPSQRDPQVISTVSEMLATIEAGGLDAVRKYAEQLDSFTGSELELDAATIAGSGERLPADLRSAIELGAARTAAFARAQREHLSDFEVELVPGLHTGQRYVPVERVGAYLPAGRFPLTASAFMTVNVAKVAGVPTVLACTPPQPDGGPNWAVLYAAAVSKVDRVFLLGGVQALAAMAFGLLGEAPVDMIVGAGNAYVAEAKRQLFGTTAIDLLAGPSEVAVIADDTADPVLVAADLLGQAEHGPDSPAALVTTSESLAHAVQGEVEEQLRTLATRDICGPAWRDHGSITVAQDRETAVVLMDDLAPEHLEIQTADDGWYHDHLHNYGSLFLGPWSTVAYSDKGMAGTNHVLPTAGGAKHSAGLSVSRFLKPLTYQRVERPATPLLADAVDVISASEGMAAHQASATLRTARLGADA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 2 | 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 3 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 4 | 3300003792 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 | Metagenome | Endosphere |
| 5 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 6 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 8 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 11 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 12 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 13 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 14 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 15 | 3300009036 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG | Metagenome | Rhizosphere |
| 16 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 17 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 18 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 19 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 20 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 21 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 22 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 23 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 24 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 25 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 26 | 3300025273 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 27 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 28 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 29 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 30 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 31 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 32 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 33 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 35 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 37 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 38 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 39 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 40 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 41 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 42 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 43 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 44 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 45 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 46 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 47 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 48 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 49 | 3300041443 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG | Metagenome | Rhizoplane |
| 50 | 3300041452 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG | Metagenome | Rhizoplane |
| 51 | 3300041453 | Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG | Metagenome | Rhizoplane |
| 52 | 3300041999 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 | Metagenome | Rhizosphere |
| 53 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 54 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 55 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 56 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 57 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 58 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 59 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 60 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 61 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 62 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 63 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 64 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 65 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 66 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 67 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 68 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 69 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 70 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 71 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 72 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 73 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 74 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 75 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 76 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 77 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 78 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 79 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 80 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 81 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 82 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 83 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 84 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 85 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 86 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 88 | 3300053139 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere | Metagenome | Endosphere |
| 89 | 3300053140 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere | Metagenome | Endosphere |
| 90 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 91 | 2582580736 | Prauserella sp. Am3 | Isolate | Unclassified |
| 92 | 2643221724 | Microbacterium sp. Root280D1 | Isolate | Unclassified |
| 93 | 2728369276 | Kineococcus rhizosphaerae DSM 19711 | Isolate | Rhizosphere |
| 94 | 2808606370 | Arthrobacter sp. SLBN-100 | Isolate | Unclassified |
| 95 | 2808606447 | Microbacterium sp. HAR-UPW-R2A-48 | Isolate | Unclassified |
| 96 | 2808606700 | Arthrobacter agilis UMCV2 | Isolate | Rhizosphere |
| 97 | 2852646457 | Microbacterium sp. AK031 | Isolate | Rhizosphere |
| 98 | 2857723135 | Microbacterium sp. R-72356 | Isolate | Unclassified |
| 99 | 2857729791 | Plantibacter sp. R-72288 | Isolate | Unclassified |
| 100 | 2867369537 | Streptomyces sp. Z26 | Isolate | Unclassified |
| 101 | 2902837492 | Mycolicibacterium sp. P1-18 | Isolate | Unclassified |
| 102 | 2905926851 | Arthrobacter sedimenti MIC A30 | Isolate | Rhizosphere |
| 103 | 2919059106 | Arthrobacter sp. 1088 | Isolate | Rhizosphere |
| 104 | 2919523602 | Leifsonia shinshuensis 3821 | Isolate | Unclassified |
| 105 | 2928121344 | Plantibacter flavus 1756 | Isolate | Rhizosphere |
| 106 | 2946003308 | Arthrobacter agilis W3I6 | Isolate | Rhizosphere |
| 107 | 2946033335 | Microbacterium sp. W4I4 | Isolate | Rhizosphere |
| 108 | 2946080515 | Microbacterium sp. W4I20 | Isolate | Rhizosphere |
| 109 | 2974294766 | Microbacterium proteolyticum SORGH_AS 209 | Isolate | Unclassified |
| 110 | 2974324384 | Microbacterium sp. SORGH_AS 344 | Isolate | Unclassified |
| 111 | 8055034563 | Leucobacter allii H21R-40 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 85.53 |
| Metatranscriptomes | 0 |
| Isolates | 14.47 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 8.55 |
| Nodule | 0 |
| Rhizoplane | 19.74 |
| Rhizosphere | 59.21 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0207671_10059981 | 3300025914 | Bacteria | 2822 |
| 2 | JGI25406J46586_10022037 | 3300003203 | Bacteria | 2547 |
| 3 | rootH2_10062360 | 3300003320 | Bacteria | 5609 |
| 4 | Ga0055540_1010833 | 3300003792 | Bacteria | 3003 |
| 5 | Ga0055540_1012171 | 3300003792 | Bacteria | 2720 |
| 6 | Ga0070689_100151919 | 3300005340 | Bacteria | 1868 |
| 7 | Ga0070668_100103070 | 3300005347 | Bacteria | 2263 |
| 8 | Ga0070671_100060459 | 3300005355 | Bacteria | 3154 |
| 9 | Ga0070678_100034608 | 3300005456 | Bacteria | 3519 |
| 10 | Ga0070678_100070069 | 3300005456 | Bacteria | 2620 |
| 11 | Ga0070665_100069950 | 3300005548 | Bacteria | 3517 |
| 12 | Ga0068862_100119243 | 3300005844 | Bacteria | 2324 |
| 13 | Ga0081539_10000699 | 3300005985 | Bacteria | 67274 |
| 14 | Ga0075364_10013490 | 3300006051 | Bacteria | 5025 |
| 15 | Ga0097621_100078953 | 3300006237 | Bacteria | 2735 |
| 16 | Ga0075370_10014206 | 3300006353 | Bacteria | 4244 |
| 17 | Ga0105244_10002643 | 3300009036 | Bacteria | 13435 |
| 18 | Ga0105244_10005427 | 3300009036 | Bacteria | 8480 |
| 19 | Ga0105244_10065738 | 3300009036 | Bacteria | 1816 |
| 20 | Ga0105243_10005148 | 3300009148 | Bacteria | 10245 |
| 21 | Ga0105242_10216887 | 3300009176 | Bacteria | 1708 |
| 22 | Ga0105246_10001756 | 3300011119 | Bacteria | 12961 |
| 23 | Ga0105246_10020516 | 3300011119 | Bacteria | 4239 |
| 24 | Ga0105246_10060682 | 3300011119 | Bacteria | 2628 |
| 25 | Ga0157370_10145015 | 3300013104 | Bacteria | 2211 |
| 26 | Ga0157369_10034014 | 3300013105 | Bacteria | 5597 |
| 27 | Ga0163162_10311814 | 3300013306 | Bacteria | 1706 |
| 28 | Ga0157372_10064417 | 3300013307 | Bacteria | 4113 |
| 29 | Ga0157375_10026514 | 3300013308 | Bacteria | 5402 |
| 30 | Ga0157380_10035602 | 3300014326 | Bacteria | 3845 |
| 31 | Ga0213875_10000768 | 3300021388 | Bacteria | 24048 |
| 32 | Ga0209673_1014184 | 3300025273 | Bacteria | 3095 |
| 33 | Ga0209051_1006756 | 3300025303 | Bacteria | 6402 |
| 34 | Ga0207655_1016405 | 3300025728 | Bacteria | 4051 |
| 35 | Ga0207655_1033756 | 3300025728 | Bacteria | 2313 |
| 36 | Ga0207709_10014025 | 3300025935 | Bacteria | 4424 |
| 37 | Ga0207670_10021365 | 3300025936 | Bacteria | 3992 |
| 38 | Ga0207668_10093376 | 3300025972 | Bacteria | 2217 |
| 39 | Ga0207678_10074820 | 3300026067 | Bacteria | 2901 |
| 40 | Ga0207648_10005270 | 3300026089 | Bacteria | 13056 |
| 41 | Ga0207683_10005005 | 3300026121 | Bacteria | 11386 |
| 42 | Ga0207698_10115078 | 3300026142 | Bacteria | 2264 |
| 43 | Ga0307408_100000855 | 3300031548 | Bacteria | 23981 |
| 44 | Ga0307408_100013931 | 3300031548 | Bacteria | 5340 |
| 45 | Ga0307405_10002207 | 3300031731 | Bacteria | 8504 |
| 46 | Ga0307405_10030377 | 3300031731 | Bacteria | 3168 |
| 47 | Ga0307413_10028208 | 3300031824 | Bacteria | 3123 |
| 48 | Ga0307406_10000325 | 3300031901 | Bacteria | 27786 |
| 49 | Ga0307406_10047587 | 3300031901 | Bacteria | 2704 |
| 50 | Ga0307406_10069723 | 3300031901 | Bacteria | 2300 |
| 51 | Ga0307407_10018106 | 3300031903 | Bacteria | 3554 |
| 52 | Ga0307412_10016954 | 3300031911 | Bacteria | 4352 |
| 53 | Ga0307409_100057519 | 3300031995 | Bacteria | 3014 |
| 54 | Ga0307409_100126575 | 3300031995 | Bacteria | 2174 |
| 55 | Ga0307409_100190102 | 3300031995 | Bacteria | 1827 |
| 56 | Ga0307409_100225049 | 3300031995 | Bacteria | 1696 |
| 57 | Ga0307416_100015743 | 3300032002 | Bacteria | 5233 |
| 58 | Ga0307416_100020009 | 3300032002 | Bacteria | 4763 |
| 59 | Ga0307414_10070358 | 3300032004 | Bacteria | 2519 |
| 60 | Ga0307415_100001657 | 3300032126 | Bacteria | 10805 |
| 61 | Ga0395898_0054533 | 3300037466 | Bacteria | 3900 |
| 62 | Ga0436364_0559791 | 3300037853 | Bacteria | 37574 |
| 63 | Ga0395901_0028861 | 3300038443 | Bacteria | 5707 |
| 64 | Ga0395901_0098467 | 3300038443 | Bacteria | 3066 |
| 65 | Ga0451789_0170843 | 3300041443 | Bacteria | 2775 |
| 66 | Ga0451793_0317156 | 3300041452 | Bacteria | 7209 |
| 67 | Ga0451797_0402994 | 3300041453 | Bacteria | 2463 |
| 68 | Ga0439433_0023193 | 3300041999 | Bacteria | 1395 |
| 69 | Ga0466969_0086847 | 3300044656 | Bacteria | 1486 |
| 70 | Ga0466972_0026712 | 3300044658 | Bacteria | 2860 |
| 71 | Ga0466965_0014693 | 3300044683 | Bacteria | 3706 |
| 72 | Ga0466965_0033002 | 3300044683 | Bacteria | 2529 |
| 73 | Ga0466965_0101114 | 3300044683 | Bacteria | 1474 |
| 74 | Ga0466961_0040996 | 3300044693 | Bacteria | 2968 |
| 75 | Ga0466961_0134132 | 3300044693 | Bacteria | 1552 |
| 76 | Ga0466964_0026246 | 3300044706 | Bacteria | 2280 |
| 77 | Ga0466970_0003270 | 3300044765 | Bacteria | 7877 |
| 78 | Ga0466970_0047848 | 3300044765 | Bacteria | 2279 |
| 79 | Ga0466970_0063719 | 3300044765 | Bacteria | 1976 |
| 80 | Ga0466959_0034761 | 3300045049 | Bacteria | 3728 |
| 81 | Ga0466967_0000107 | 3300045976 | Bacteria | 30383 |
| 82 | Ga0466967_0000285 | 3300045976 | Bacteria | 22474 |
| 83 | Ga0466967_0100862 | 3300045976 | Bacteria | 2638 |
| 84 | Ga0495653_0025592 | 3300046463 | Bacteria | 4738 |
| 85 | Ga0495653_0047683 | 3300046463 | Bacteria | 3313 |
| 86 | Ga0496100_0077653 | 3300048903 | Bacteria | 2233 |
| 87 | Ga0496100_0114717 | 3300048903 | Bacteria | 1877 |
| 88 | Ga0496100_0114776 | 3300048903 | Bacteria | 1877 |
| 89 | Ga0496101_0105471 | 3300048904 | Bacteria | 2115 |
| 90 | Ga0496102_0127786 | 3300048905 | Bacteria | 2377 |
| 91 | Ga0496102_0208319 | 3300048905 | Bacteria | 1843 |
| 92 | Ga0496103_0047361 | 3300048906 | Bacteria | 2657 |
| 93 | Ga0496104_0045525 | 3300048907 | Bacteria | 4127 |
| 94 | Ga0496104_0069324 | 3300048907 | Bacteria | 3351 |
| 95 | Ga0496105_0035746 | 3300048908 | Bacteria | 4091 |
| 96 | Ga0496105_0083680 | 3300048908 | Bacteria | 2635 |
| 97 | Ga0496105_0248682 | 3300048908 | Bacteria | 1441 |
| 98 | Ga0496106_0035792 | 3300048909 | Bacteria | 3713 |
| 99 | Ga0496108_0026571 | 3300048911 | Bacteria | 4775 |
| 100 | Ga0496108_0050807 | 3300048911 | Bacteria | 3472 |
| 101 | Ga0496109_0009403 | 3300048912 | Bacteria | 8329 |
| 102 | Ga0496109_0086384 | 3300048912 | Bacteria | 2897 |
| 103 | Ga0496109_0102560 | 3300048912 | Bacteria | 2655 |
| 104 | Ga0496109_0134099 | 3300048912 | Bacteria | 2313 |
| 105 | Ga0496109_0135034 | 3300048912 | Bacteria | 2305 |
| 106 | Ga0496110_0018886 | 3300048913 | Bacteria | 5792 |
| 107 | Ga0496110_0024269 | 3300048913 | Bacteria | 5166 |
| 108 | Ga0496111_0035839 | 3300048914 | Bacteria | 3547 |
| 109 | Ga0496113_0102134 | 3300048916 | Bacteria | 2223 |
| 110 | Ga0496114_0004020 | 3300048917 | Bacteria | 11363 |
| 111 | Ga0496114_0135641 | 3300048917 | Bacteria | 2128 |
| 112 | Ga0496114_0238257 | 3300048917 | Bacteria | 1599 |
| 113 | Ga0496117_0007676 | 3300048920 | Bacteria | 10447 |
| 114 | Ga0496122_0012853 | 3300048925 | Bacteria | 8278 |
| 115 | Ga0496123_0007632 | 3300048926 | Bacteria | 10125 |
| 116 | Ga0496124_0096232 | 3300048927 | Bacteria | 2405 |
| 117 | Ga0496125_0085095 | 3300048928 | Bacteria | 2397 |
| 118 | Ga0501033_0089036 | 3300049570 | Bacteria | 2258 |
| 119 | Ga0501038_0003262 | 3300049574 | Bacteria | 15138 |
| 120 | Ga0501047_0213004 | 3300049581 | Bacteria | 1790 |
| 121 | Ga0501080_0122076 | 3300049742 | Bacteria | 2414 |
| 122 | Ga0501044_0001961 | 3300049823 | Bacteria | 23806 |
| 123 | nmdc:mga00v17_89425_c1 | 3300050491 | Bacteria | 1932 |
| 124 | Ga0495619_0048900 | 3300053085 | Bacteria | 2787 |
| 125 | Ga0500559_0000469 | 3300053136 | Bacteria | 28736 |
| 126 | Ga0500559_0005093 | 3300053136 | Bacteria | 6083 |
| 127 | Ga0500568_0000036 | 3300053139 | Bacteria | 135685 |
| 128 | Ga0500573_0005804 | 3300053140 | Bacteria | 6628 |
| 129 | Ga0500573_0028344 | 3300053140 | Bacteria | 3225 |
| 130 | Ga0500616_0000243 | 3300053153 | Bacteria | 85649 |
| 131 | 2583151321 | 2582580736 | Bacteria | 5325865 |
| 132 | 2644678650 | 2643221724 | Bacteria | 3593515 |
| 133 | 2729909508 | 2728369276 | Bacteria | 5610032 |
| 134 | 2808892441 | 2808606370 | Bacteria | 4942454 |
| 135 | 2809226600 | 2808606447 | Bacteria | 3572005 |
| 136 | 2810362658 | 2808606700 | Bacteria | 3482157 |
| 137 | 2852649414 | 2852646457 | Bacteria | 3408613 |
| 138 | 2857725555 | 2857723135 | Bacteria | 4217853 |
| 139 | 2857731298 | 2857729791 | Bacteria | 4040535 |
| 140 | 2867374322 | 2867369537 | Bacteria | 6501581 |
| 141 | 2902843490 | 2902837492 | Bacteria | 6697721 |
| 142 | 2905930576 | 2905926851 | Bacteria | 4423176 |
| 143 | 2919062421 | 2919059106 | Bacteria | 4991624 |
| 144 | 2919062434 | 2919059106 | Bacteria | 4991624 |
| 145 | 2919526748 | 2919523602 | Bacteria | 3788128 |
| 146 | 2928122138 | 2928121344 | Bacteria | 3972376 |
| 147 | 2946006701 | 2946003308 | Bacteria | 3857229 |
| 148 | 2946036464 | 2946033335 | Bacteria | 3835514 |
| 149 | 2946082737 | 2946080515 | Bacteria | 4310960 |
| 150 | 2974295324 | 2974294766 | Bacteria | 3767688 |
| 151 | 2974324873 | 2974324384 | Bacteria | 3750535 |
| 152 | 8055034945 | 8055034563 | Bacteria | 3562128 |
| 153 | Ga0207671_10059981 | |||
| 154 | JGI25406J46586_10022037 | |||
| 155 | rootH2_10062360 | |||
| 156 | Ga0055540_1010833 | |||
| 157 | Ga0055540_1012171 | |||
| 158 | Ga0070689_100151919 | |||
| 159 | Ga0070668_100103070 | |||
| 160 | Ga0070671_100060459 | |||
| 161 | Ga0070678_100034608 | |||
| 162 | Ga0070678_100070069 | |||
| 163 | Ga0070665_100069950 | |||
| 164 | Ga0068862_100119243 | |||
| 165 | Ga0081539_10000699 | |||
| 166 | Ga0075364_10013490 | |||
| 167 | Ga0097621_100078953 | |||
| 168 | Ga0075370_10014206 | |||
| 169 | Ga0105244_10002643 | |||
| 170 | Ga0105244_10005427 | |||
| 171 | Ga0105244_10065738 | |||
| 172 | Ga0105243_10005148 | |||
| 173 | Ga0105242_10216887 | |||
| 174 | Ga0105246_10001756 | |||
| 175 | Ga0105246_10020516 | |||
| 176 | Ga0105246_10060682 | |||
| 177 | Ga0157370_10145015 | |||
| 178 | Ga0157369_10034014 | |||
| 179 | Ga0163162_10311814 | |||
| 180 | Ga0157372_10064417 | |||
| 181 | Ga0157375_10026514 | |||
| 182 | Ga0157380_10035602 | |||
| 183 | Ga0213875_10000768 | |||
| 184 | Ga0209673_1014184 | |||
| 185 | Ga0209051_1006756 | |||
| 186 | Ga0207655_1016405 | |||
| 187 | Ga0207655_1033756 | |||
| 188 | Ga0207709_10014025 | |||
| 189 | Ga0207670_10021365 | |||
| 190 | Ga0207668_10093376 | |||
| 191 | Ga0207678_10074820 | |||
| 192 | Ga0207648_10005270 | |||
| 193 | Ga0207683_10005005 | |||
| 194 | Ga0207698_10115078 | |||
| 195 | Ga0307408_100000855 | |||
| 196 | Ga0307408_100013931 | |||
| 197 | Ga0307405_10002207 | |||
| 198 | Ga0307405_10030377 | |||
| 199 | Ga0307413_10028208 | |||
| 200 | Ga0307406_10000325 | |||
| 201 | Ga0307406_10047587 | |||
| 202 | Ga0307406_10069723 | |||
| 203 | Ga0307407_10018106 | |||
| 204 | Ga0307412_10016954 | |||
| 205 | Ga0307409_100057519 | |||
| 206 | Ga0307409_100126575 | |||
| 207 | Ga0307409_100190102 | |||
| 208 | Ga0307409_100225049 | |||
| 209 | Ga0307416_100015743 | |||
| 210 | Ga0307416_100020009 | |||
| 211 | Ga0307414_10070358 | |||
| 212 | Ga0307415_100001657 | |||
| 213 | Ga0395898_0054533 | |||
| 214 | Ga0436364_0559791 | |||
| 215 | Ga0395901_0028861 | |||
| 216 | Ga0395901_0098467 | |||
| 217 | Ga0451789_0170843 | |||
| 218 | Ga0451793_0317156 | |||
| 219 | Ga0451797_0402994 | |||
| 220 | Ga0439433_0023193 | |||
| 221 | Ga0466969_0086847 | |||
| 222 | Ga0466972_0026712 | |||
| 223 | Ga0466965_0014693 | |||
| 224 | Ga0466965_0033002 | |||
| 225 | Ga0466965_0101114 | |||
| 226 | Ga0466961_0040996 | |||
| 227 | Ga0466961_0134132 | |||
| 228 | Ga0466964_0026246 | |||
| 229 | Ga0466970_0003270 | |||
| 230 | Ga0466970_0047848 | |||
| 231 | Ga0466970_0063719 | |||
| 232 | Ga0466959_0034761 | |||
| 233 | Ga0466967_0000107 | |||
| 234 | Ga0466967_0000285 | |||
| 235 | Ga0466967_0100862 | |||
| 236 | Ga0495653_0025592 | |||
| 237 | Ga0495653_0047683 | |||
| 238 | Ga0496100_0077653 | |||
| 239 | Ga0496100_0114717 | |||
| 240 | Ga0496100_0114776 | |||
| 241 | Ga0496101_0105471 | |||
| 242 | Ga0496102_0127786 | |||
| 243 | Ga0496102_0208319 | |||
| 244 | Ga0496103_0047361 | |||
| 245 | Ga0496104_0045525 | |||
| 246 | Ga0496104_0069324 | |||
| 247 | Ga0496105_0035746 | |||
| 248 | Ga0496105_0083680 | |||
| 249 | Ga0496105_0248682 | |||
| 250 | Ga0496106_0035792 | |||
| 251 | Ga0496108_0026571 | |||
| 252 | Ga0496108_0050807 | |||
| 253 | Ga0496109_0009403 | |||
| 254 | Ga0496109_0086384 | |||
| 255 | Ga0496109_0102560 | |||
| 256 | Ga0496109_0134099 | |||
| 257 | Ga0496109_0135034 | |||
| 258 | Ga0496110_0018886 | |||
| 259 | Ga0496110_0024269 | |||
| 260 | Ga0496111_0035839 | |||
| 261 | Ga0496113_0102134 | |||
| 262 | Ga0496114_0004020 | |||
| 263 | Ga0496114_0135641 | |||
| 264 | Ga0496114_0238257 | |||
| 265 | Ga0496117_0007676 | |||
| 266 | Ga0496122_0012853 | |||
| 267 | Ga0496123_0007632 | |||
| 268 | Ga0496124_0096232 | |||
| 269 | Ga0496125_0085095 | |||
| 270 | Ga0501033_0089036 | |||
| 271 | Ga0501038_0003262 | |||
| 272 | Ga0501047_0213004 | |||
| 273 | Ga0501080_0122076 | |||
| 274 | Ga0501044_0001961 | |||
| 275 | nmdc:mga00v17_89425_c1 | |||
| 276 | Ga0495619_0048900 | |||
| 277 | Ga0500559_0000469 | |||
| 278 | Ga0500559_0005093 | |||
| 279 | Ga0500568_0000036 | |||
| 280 | Ga0500573_0005804 | |||
| 281 | Ga0500573_0028344 | |||
| 282 | Ga0500616_0000243 | |||
| 283 | 2583151321 | |||
| 284 | 2644678650 | |||
| 285 | 2729909508 | |||
| 286 | 2808892441 | |||
| 287 | 2809226600 | |||
| 288 | 2810362658 | |||
| 289 | 2852649414 | |||
| 290 | 2857725555 | |||
| 291 | 2857731298 | |||
| 292 | 2867374322 | |||
| 293 | 2902843490 | |||
| 294 | 2905930576 | |||
| 295 | 2919062421 | |||
| 296 | 2919062434 | |||
| 297 | 2919526748 | |||
| 298 | 2928122138 | |||
| 299 | 2946006701 | |||
| 300 | 2946036464 | |||
| 301 | 2946082737 | |||
| 302 | 2974295324 | |||
| 303 | 2974324873 | |||
| 304 | 8055034945 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 7k5z-assembly1.cif.gz_D | crystal structure of argininosuccinate synthase from legionella pneumophila philadelphia 1 in complex with anppnp and a substrate analogue arginine | 0.7068 | 126 | 190 |
| 6s5e-assembly1.cif.gz_E-4 | non-square conformation of ktra a80p mutant ring with bound atp | 0.6481 | 130 | 188 |
| 4g09-assembly1.cif.gz_A-2 | the crystal structure of the c366s mutant of hdh from brucella suis in complex with a substituted benzyl ketone | 0.6201 | 30 | 403 |
| 4g07-assembly1.cif.gz_A-2 | the crystal structure of the c366s mutant of hdh from brucella suis | 0.6189 | 31 | 404 |
| 7pay-assembly1.cif.gz_B-2 | structure of the human heterotetrameric cis-prenyltransferase complex in complex with magnesium and ggspp | 0.5953 | 124 | 163 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P9WNW9_40_244_3.40.50.1980 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain | 0.9097 | 35 | 225 | 3.40.50.1980 |
| 6an0A03 | Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; | 0.9095 | 362 | 399 | 1.20.5.1300 |
| 4g07A02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain | 0.9062 | 33 | 225 | 3.40.50.1980 |
| 5vlbA03 | Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; | 0.9053 | 363 | 398 | 1.20.5.1300 |
| 1k75A02 | Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; | 0.9005 | 363 | 399 | 1.20.5.1300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1S9DF00-F1-model_v4 | Histidinol dehydrogenase | 0.9485 | 80 | 185 |
GO:0000105
GO:0004399 GO:0005829 GO:0046872 GO:0051287 |
| AF-A0A0D2JKR0-F1-model_v4 | Histidinol dehydrogenase | 0.9363 | 124 | 225 |
GO:0000105
GO:0004399 GO:0005829 GO:0009570 GO:0046872 GO:0051287 |
| AF-A0A5R2MZL4-F1-model_v4 | Histidinol dehydrogenase | 0.9246 | 122 | 225 |
GO:0000105
GO:0004399 GO:0005829 GO:0046872 GO:0051287 |
| AF-A0A328SAZ9-F1-model_v4 | Histidinol dehydrogenase | 0.9222 | 29 | 225 |
GO:0000105
GO:0004399 GO:0005737 GO:0046872 GO:0051287 |
| AF-A0A382L0X2-F1-model_v4 | Histidinol dehydrogenase | 0.9214 | 34 | 221 |
GO:0000105
GO:0004399 GO:0005737 GO:0046872 GO:0051287 |