F214383

General Info

Members Datasets Scaffolds Average Seq Length
152 79 304 320

Family's Representative Sequence

Representative Sequence 3300014745|Ga0157377_10176871|Ga0157377_101768711
Length 346
Sequence MNRVLVTGGAGTIGTAVVRRLLSDPDWEVRVSDQRPPPQWMRESCEVHTGDLRELAEARKATAGCSHVIHLAAIVGGIANFHKLPYTLTEVNSALYNGVVRAALDHDVERFTYVSSSMVFERATEYPTTEEHIWECPMPRSAYGFSKLTGEVYVRAAHDEHGLPYTICRPFNAYGPGEMPEDEPGIAHAVPDLIRKCLDLPPNAPLPIFGDGTHTRTLTHIDDIADGIVTAMGSPAGLDEDFNVSADEELTVADIARIIWEETGRDPEAFALEHQPTFDVDVVRRWPSVAKADRLLGWRARIGPRDGIRQTVDWLRDHGVTDAERLVSLARPAAAGHSRRPPAVGR

Samples

Sample ID Description Type Environment
1 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
5 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
6 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
23 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
29 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
30 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
33 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
34 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
35 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
44 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
45 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
46 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
47 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
48 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
49 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
52 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
53 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
54 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
55 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
56 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
57 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
58 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
59 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
60 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
61 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
62 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
63 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
64 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
65 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
66 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
67 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
68 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
69 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
70 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
71 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
72 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
74 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
75 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
76 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
77 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
78 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
79 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.32
Nodule 0
Rhizoplane 9.21
Rhizosphere 65.13
Stem 0
Stem Tuber 0
Unclassified 0.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157377_10176871 3300014745 Bacteria 1339
2 JGI25407J50210_10001794 3300003373 Bacteria 4946
3 Ga0070683_100313685 3300005329 Bacteria 1492
4 Ga0070668_100068663 3300005347 Bacteria 2755
5 Ga0070673_100448718 3300005364 Bacteria 1160
6 Ga0070688_100173073 3300005365 Bacteria 1492
7 Ga0070714_100005134 3300005435 Bacteria 9962
8 Ga0070714_100073062 3300005435 Bacteria 2971
9 Ga0070701_10088866 3300005438 Bacteria 1689
10 Ga0070700_100059160 3300005441 Bacteria 2411
11 Ga0070663_100114804 3300005455 Bacteria 2028
12 Ga0070662_100063055 3300005457 Bacteria 2710
13 Ga0070684_100099593 3300005535 Bacteria 2594
14 Ga0070672_100260408 3300005543 Bacteria 1463
15 Ga0070696_100099125 3300005546 Bacteria 2085
16 Ga0070665_100001058 3300005548 Bacteria 34437
17 Ga0070704_100099965 3300005549 Bacteria 2183
18 Ga0070664_100131217 3300005564 Bacteria 2201
19 Ga0068857_100348764 3300005577 Bacteria 1370
20 Ga0068864_100240069 3300005618 Bacteria 1679
21 Ga0068861_100001665 3300005719 Bacteria 14221
22 Ga0081538_10001022 3300005981 Bacteria 29868
23 Ga0081538_10001698 3300005981 Bacteria 22437
24 Ga0081538_10062527 3300005981 Bacteria 2122
25 Ga0081538_10139809 3300005981 Bacteria 1119
26 Ga0081540_1004044 3300005983 Bacteria 11357
27 Ga0081539_10001368 3300005985 Bacteria 42269
28 Ga0070717_10011586 3300006028 Bacteria 6702
29 Ga0070717_10053528 3300006028 Bacteria 3327
30 Ga0075365_10224982 3300006038 Bacteria 1316
31 Ga0075430_100000494 3300006846 Bacteria 29636
32 Ga0105245_10013325 3300009098 Bacteria 7164
33 Ga0105245_10016175 3300009098 Bacteria 6500
34 Ga0105245_10448681 3300009098 Bacteria 1298
35 Ga0105243_10129337 3300009148 Bacteria 2140
36 Ga0105243_10562856 3300009148 Bacteria 1091
37 Ga0105242_10064801 3300009176 Bacteria 3013
38 Ga0105242_10472706 3300009176 Bacteria 1186
39 Ga0105242_10605088 3300009176 Bacteria 1059
40 Ga0105249_10141655 3300009553 Bacteria 2306
41 Ga0105249_10270365 3300009553 Bacteria 1693
42 Ga0157378_10184032 3300013297 Bacteria 1967
43 Ga0213874_10000485 3300021377 Bacteria 7990
44 Ga0213874_10070093 3300021377 Bacteria 1116
45 Ga0213876_10002102 3300021384 Bacteria 11784
46 Ga0213876_10035399 3300021384 Bacteria 2633
47 Ga0213876_10041157 3300021384 Bacteria 2441
48 Ga0213876_10062067 3300021384 Bacteria 1972
49 Ga0213876_10135656 3300021384 Bacteria 1309
50 Ga0213875_10000162 3300021388 Bacteria 70242
51 Ga0213875_10028259 3300021388 Bacteria 2665
52 Ga0207700_10092149 3300025928 Bacteria 2395
53 Ga0207664_10001728 3300025929 Bacteria 14380
54 Ga0207664_10196702 3300025929 Bacteria 1738
55 Ga0207706_10031884 3300025933 Bacteria 4695
56 Ga0207708_10014680 3300026075 Bacteria 5862
57 Ga0207708_10079543 3300026075 Bacteria 2518
58 Ga0207702_10068873 3300026078 Bacteria 3041
59 Ga0207674_10051758 3300026116 Bacteria 4190
60 Ga0207675_100004018 3300026118 Bacteria 14266
61 Ga0207675_100638293 3300026118 Bacteria 1070
62 Ga0268266_10026642 3300028379 Bacteria 4918
63 Ga0436364_0021731 3300037853 Bacteria 3506
64 Ga0436364_0134071 3300037853 Bacteria 2052
65 Ga0436364_0161423 3300037853 Bacteria 6010
66 Ga0436364_0177467 3300037853 Bacteria 1096
67 Ga0436364_0220708 3300037853 Bacteria 13586
68 Ga0436364_0716277 3300037853 Bacteria 4116
69 Ga0436364_1082254 3300037853 Bacteria 49536
70 Ga0436364_1132411 3300037853 Bacteria 58691
71 Ga0436364_1241794 3300037853 Bacteria 3339
72 Ga0436364_1324544 3300037853 Bacteria 5128
73 Ga0436365_0021944 3300039437 Bacteria 5144
74 Ga0436365_0262453 3300039437 Bacteria 28030
75 Ga0436365_0327293 3300039437 Bacteria 1576
76 Ga0436365_0655741 3300039437 Bacteria 988
77 Ga0436365_0740941 3300039437 Bacteria 1947
78 Ga0436365_0904156 3300039437 Bacteria 7410
79 Ga0436365_1174289 3300039437 Bacteria 19637
80 Ga0436365_1380009 3300039437 Bacteria 3741
81 Ga0436365_1503119 3300039437 Bacteria 5294
82 Ga0436365_1579977 3300039437 Bacteria 2116
83 Ga0436360_0114502 3300039438 Bacteria 1435
84 Ga0436361_1169438 3300039447 Bacteria 2386
85 Ga0436363_0326849 3300039450 Bacteria 1246
86 Ga0436363_0488953 3300039450 Bacteria 3616
87 Ga0436363_0581651 3300039450 Bacteria 1137
88 Ga0436363_0678117 3300039450 Bacteria 33768
89 Ga0436363_0742356 3300039450 Bacteria 5756
90 Ga0436363_1052438 3300039450 Bacteria 5430
91 Ga0436363_1065629 3300039450 Bacteria 1149
92 Ga0436363_1621409 3300039450 Bacteria 1353
93 Ga0436362_0572436 3300039453 Bacteria 1247
94 Ga0466966_0013150 3300044684 Bacteria 5481
95 Ga0466966_0031660 3300044684 Bacteria 3430
96 Ga0466966_0096874 3300044684 Bacteria 1827
97 Ga0466961_0001786 3300044693 Bacteria 13319
98 Ga0466961_0042732 3300044693 Bacteria 2905
99 Ga0466963_0007310 3300044694 Bacteria 6586
100 Ga0466963_0057123 3300044694 Bacteria 2598
101 Ga0466963_0131676 3300044694 Bacteria 1728
102 Ga0466971_0022922 3300044719 Bacteria 2783
103 Ga0466971_0073500 3300044719 Bacteria 1554
104 Ga0466968_0032568 3300044735 Bacteria 2169
105 Ga0466968_0039585 3300044735 Bacteria 1985
106 Ga0466968_0054345 3300044735 Bacteria 1717
107 Ga0466957_0196623 3300044842 Bacteria 1323
108 Ga0466959_0014324 3300045049 Bacteria 5756
109 Ga0466959_0044528 3300045049 Bacteria 3270
110 Ga0466959_0062611 3300045049 Bacteria 2703
111 Ga0466958_0000261 3300045836 Bacteria 20448
112 Ga0466958_0008684 3300045836 Bacteria 5641
113 Ga0466958_0010602 3300045836 Bacteria 5166
114 Ga0466958_0015420 3300045836 Bacteria 4380
115 Ga0466958_0025299 3300045836 Bacteria 3499
116 Ga0466958_0030724 3300045836 Bacteria 3192
117 Ga0466958_0076526 3300045836 Bacteria 2054
118 Ga0466958_0293735 3300045836 Bacteria 1043
119 Ga0466958_0359200 3300045836 Bacteria 938
120 Ga0466967_0001282 3300045976 Bacteria 14293
121 Ga0466967_0002486 3300045976 Bacteria 11505
122 Ga0466967_0028915 3300045976 Bacteria 4633
123 Ga0495582_0246569 3300046473 Bacteria 1024
124 Ga0495652_0088255 3300046529 Bacteria 2542
125 Ga0495656_0086463 3300046615 Bacteria 1426
126 Ga0495589_0064559 3300046794 Bacteria 1795
127 Ga0495676_0238295 3300047321 Bacteria 1247
128 Ga0495684_0005494 3300047471 Bacteria 9866
129 Ga0496100_0238998 3300048903 Bacteria 1339
130 Ga0496104_0199238 3300048907 Bacteria 1914
131 Ga0496106_0119366 3300048909 Bacteria 2060
132 Ga0496108_0046785 3300048911 Bacteria 3615
133 Ga0496108_0052981 3300048911 Bacteria 3401
134 Ga0496108_0408894 3300048911 Bacteria 1185
135 Ga0496109_0077231 3300048912 Bacteria 3064
136 Ga0496112_0471625 3300048915 Bacteria 1192
137 Ga0496112_0552093 3300048915 Bacteria 1086
138 Ga0496113_0084745 3300048916 Bacteria 2434
139 Ga0496113_0155221 3300048916 Bacteria 1807
140 Ga0496114_0116309 3300048917 Bacteria 2296
141 Ga0496114_0177181 3300048917 Bacteria 1861
142 Ga0496114_0272913 3300048917 Bacteria 1490
143 Ga0501040_0084068 3300049576 Bacteria 2208
144 Ga0501076_0167114 3300049592 Bacteria 1793
145 nmdc:mga0yw44_298824_c1 3300050492 Bacteria 1078
146 nmdc:mga0qj67_477_c1 3300050509 Bacteria 27359
147 Ga0495619_0156265 3300053085 Bacteria 1574
148 Ga0501082_0335823 3300060353 Unclassified 1317
149 Ga0466962_0025049 3300061719 Bacteria 2864
150 Ga0466962_0033014 3300061719 Bacteria 2476
151 Ga0466962_0112172 3300061719 Bacteria 1313
152 Ga0530510_0103302 3300061734 Bacteria 2084
153 Ga0157377_10176871
154 JGI25407J50210_10001794
155 Ga0070683_100313685
156 Ga0070668_100068663
157 Ga0070673_100448718
158 Ga0070688_100173073
159 Ga0070714_100005134
160 Ga0070714_100073062
161 Ga0070701_10088866
162 Ga0070700_100059160
163 Ga0070663_100114804
164 Ga0070662_100063055
165 Ga0070684_100099593
166 Ga0070672_100260408
167 Ga0070696_100099125
168 Ga0070665_100001058
169 Ga0070704_100099965
170 Ga0070664_100131217
171 Ga0068857_100348764
172 Ga0068864_100240069
173 Ga0068861_100001665
174 Ga0081538_10001022
175 Ga0081538_10001698
176 Ga0081538_10062527
177 Ga0081538_10139809
178 Ga0081540_1004044
179 Ga0081539_10001368
180 Ga0070717_10011586
181 Ga0070717_10053528
182 Ga0075365_10224982
183 Ga0075430_100000494
184 Ga0105245_10013325
185 Ga0105245_10016175
186 Ga0105245_10448681
187 Ga0105243_10129337
188 Ga0105243_10562856
189 Ga0105242_10064801
190 Ga0105242_10472706
191 Ga0105242_10605088
192 Ga0105249_10141655
193 Ga0105249_10270365
194 Ga0157378_10184032
195 Ga0213874_10000485
196 Ga0213874_10070093
197 Ga0213876_10002102
198 Ga0213876_10035399
199 Ga0213876_10041157
200 Ga0213876_10062067
201 Ga0213876_10135656
202 Ga0213875_10000162
203 Ga0213875_10028259
204 Ga0207700_10092149
205 Ga0207664_10001728
206 Ga0207664_10196702
207 Ga0207706_10031884
208 Ga0207708_10014680
209 Ga0207708_10079543
210 Ga0207702_10068873
211 Ga0207674_10051758
212 Ga0207675_100004018
213 Ga0207675_100638293
214 Ga0268266_10026642
215 Ga0436364_0021731
216 Ga0436364_0134071
217 Ga0436364_0161423
218 Ga0436364_0177467
219 Ga0436364_0220708
220 Ga0436364_0716277
221 Ga0436364_1082254
222 Ga0436364_1132411
223 Ga0436364_1241794
224 Ga0436364_1324544
225 Ga0436365_0021944
226 Ga0436365_0262453
227 Ga0436365_0327293
228 Ga0436365_0655741
229 Ga0436365_0740941
230 Ga0436365_0904156
231 Ga0436365_1174289
232 Ga0436365_1380009
233 Ga0436365_1503119
234 Ga0436365_1579977
235 Ga0436360_0114502
236 Ga0436361_1169438
237 Ga0436363_0326849
238 Ga0436363_0488953
239 Ga0436363_0581651
240 Ga0436363_0678117
241 Ga0436363_0742356
242 Ga0436363_1052438
243 Ga0436363_1065629
244 Ga0436363_1621409
245 Ga0436362_0572436
246 Ga0466966_0013150
247 Ga0466966_0031660
248 Ga0466966_0096874
249 Ga0466961_0001786
250 Ga0466961_0042732
251 Ga0466963_0007310
252 Ga0466963_0057123
253 Ga0466963_0131676
254 Ga0466971_0022922
255 Ga0466971_0073500
256 Ga0466968_0032568
257 Ga0466968_0039585
258 Ga0466968_0054345
259 Ga0466957_0196623
260 Ga0466959_0014324
261 Ga0466959_0044528
262 Ga0466959_0062611
263 Ga0466958_0000261
264 Ga0466958_0008684
265 Ga0466958_0010602
266 Ga0466958_0015420
267 Ga0466958_0025299
268 Ga0466958_0030724
269 Ga0466958_0076526
270 Ga0466958_0293735
271 Ga0466958_0359200
272 Ga0466967_0001282
273 Ga0466967_0002486
274 Ga0466967_0028915
275 Ga0495582_0246569
276 Ga0495652_0088255
277 Ga0495656_0086463
278 Ga0495589_0064559
279 Ga0495676_0238295
280 Ga0495684_0005494
281 Ga0496100_0238998
282 Ga0496104_0199238
283 Ga0496106_0119366
284 Ga0496108_0046785
285 Ga0496108_0052981
286 Ga0496108_0408894
287 Ga0496109_0077231
288 Ga0496112_0471625
289 Ga0496112_0552093
290 Ga0496113_0084745
291 Ga0496113_0155221
292 Ga0496114_0116309
293 Ga0496114_0177181
294 Ga0496114_0272913
295 Ga0501040_0084068
296 Ga0501076_0167114
297 nmdc:mga0yw44_298824_c1
298 nmdc:mga0qj67_477_c1
299 Ga0495619_0156265
300 Ga0501082_0335823
301 Ga0466962_0025049
302 Ga0466962_0033014
303 Ga0466962_0112172
304 Ga0530510_0103302

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

4

245

0.92

PF02719

Polysacc_synt_2

Polysaccharide biosynthesis protein

4

129

0.89

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

5

190

0.87

PF04321

RmlD_sub_bind

RmlD substrate binding domain

1

177

0.83

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

5

311

0.83

PF07993

NAD_binding_4

Male sterility protein

6

198

0.79

PF13460

NAD_binding_10

NAD(P)H-binding

8

178

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kvc-assembly1.cif.gz_A-2 moee5 in complex with udp-glucose and nad 0.9045 3 317
4zrn-assembly1.cif.gz_B crystal structure of udp-glucose 4-epimerase (tm0509) with udp-glucose from hyperthermophilic eubacterium thermotoga maritima 0.9044 2 316
4zrn-assembly1.cif.gz_B crystal structure of udp-glucose 4-epimerase (tm0509) with udp-glucose from hyperthermophilic eubacterium thermotoga maritima 0.8988 2 316
2b69-assembly1.cif.gz_A crystal structure of human udp-glucoronic acid decarboxylase 0.8969 1 321
2c54-assembly1.cif.gz_B gdp-mannose-3', 5' -epimerase (arabidopsis thaliana),k178r, with gdp-beta-l-gulose and gdp-4-keto-beta-l-gulose bound in active site. 0.8963 2 322
ID Description Score Start End Superfamily
3aw9B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9064 2 173 3.40.50.720
4zrmB02 Alpha Beta;Alpha-Beta Complex;UDP-galactose 4-epimerase; domain 1;UDP-galactose 4-epimerase, domain 1 0.8971 175 315 3.90.25.10
4lk3E00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8891 1 321 3.40.50.720
4id9A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8858 4 300 3.40.50.720
af_Q93VR3_28_320_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8835 3 296 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A842Q493-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9674 130 316
AF-A0A7K0PGM9-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9566 1 217
AF-A0A7K0PGM9-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9439 1 217
AF-A0A535T3V6-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9432 88 304 GO:0016757
AF-A0A7C4WD52-F1-model_v4 SDR family NAD(P)-dependent oxidoreductase 0.942 2 321

Map