F214182

General Info

Members Datasets Scaffolds Average Seq Length
152 108 152 262

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10001355|Ga0114129_1000135510
Length 291
Sequence VGDVSRARSAANDGEFGGTGTGSAGVVADLDGPPEFARLVAHPLRWRLLRELVQSDRAVWELTERLRKPQNLVSYHLRQLRDGGLVTARRSAADGRDAYYSIDLVSCEQQLWATGGSLHPALAATAAELTPYRPRGPGGRRVLFLCTGNSARSQIAEALVSRVTGGRVEAASAGSHPKPLHPNAVRVMRRRGIDISGNRTKHLDEFMSQRFDAVITLCDRVREVCPEFPSQPALVHWSMPDPAGAGPTNQASYPAFEHTAEELETRIRFLVPLLTERSTRDETRRSSHVEQ

Samples

Sample ID Description Type Environment
1 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
12 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
25 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
26 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
46 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
73 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
74 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
75 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
76 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
77 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
78 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
79 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
80 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
81 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
82 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
83 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
84 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
85 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
86 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
87 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
88 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
89 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
90 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
91 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
92 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
93 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
94 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
95 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
98 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
99 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
100 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
101 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
102 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
103 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
104 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
105 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
106 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
107 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
108 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.29
Nodule 0
Rhizoplane 8.55
Rhizosphere 86.84
Stem 0
Stem Tuber 0
Unclassified 1.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065712_10157904 3300005290 Bacteria 1322
2 Ga0070683_100451939 3300005329 Bacteria 1226
3 Ga0070690_100051176 3300005330 Bacteria 2636
4 Ga0070677_10099556 3300005333 Bacteria 1279
5 Ga0070682_100113479 3300005337 Bacteria 1810
6 Ga0070687_100204429 3300005343 Bacteria 1199
7 Ga0070675_100050811 3300005354 Bacteria 3405
8 Ga0070659_100187758 3300005366 Bacteria 1698
9 Ga0070713_100274033 3300005436 Bacteria 1546
10 Ga0070705_100220841 3300005440 Bacteria 1312
11 Ga0070662_100173913 3300005457 Bacteria 1693
12 Ga0070679_100551667 3300005530 Bacteria 1096
13 Ga0070684_100468583 3300005535 Bacteria 1165
14 Ga0070672_100144178 3300005543 Bacteria 1967
15 Ga0070686_100045646 3300005544 Bacteria 2761
16 Ga0070665_100435361 3300005548 Bacteria 1320
17 Ga0068856_100073474 3300005614 Bacteria 3386
18 Ga0070702_100411857 3300005615 Bacteria 970
19 Ga0068864_100087564 3300005618 Bacteria 2742
20 Ga0068861_100211015 3300005719 Bacteria 1635
21 Ga0081455_10016117 3300005937 Bacteria 7226
22 Ga0081455_10034342 3300005937 Bacteria 4545
23 Ga0081455_10119701 3300005937 Bacteria 2076
24 Ga0081455_10297168 3300005937 Bacteria 1160
25 Ga0081538_10006166 3300005981 Bacteria 10631
26 Ga0081540_1000498 3300005983 Bacteria 38585
27 Ga0081540_1091386 3300005983 Bacteria 1338
28 Ga0075363_100011941 3300006048 Bacteria 4174
29 Ga0075367_10100073 3300006178 Bacteria 1771
30 Ga0097621_100134550 3300006237 Bacteria 2107
31 Ga0075428_100001779 3300006844 Bacteria 23012
32 Ga0075428_100040188 3300006844 Bacteria 5148
33 Ga0075428_100098743 3300006844 Bacteria 3183
34 Ga0075428_100120734 3300006844 Bacteria 2854
35 Ga0075428_100211907 3300006844 Bacteria 2093
36 Ga0075428_100220943 3300006844 Bacteria 2046
37 Ga0075428_100287410 3300006844 Bacteria 1769
38 Ga0075430_100011162 3300006846 Bacteria 7615
39 Ga0075430_100018800 3300006846 Bacteria 5879
40 Ga0075430_100060594 3300006846 Bacteria 3180
41 Ga0075431_100003137 3300006847 Bacteria 15989
42 Ga0075431_100044564 3300006847 Bacteria 4575
43 Ga0075431_100081747 3300006847 Bacteria 3335
44 Ga0075431_100176060 3300006847 Bacteria 2197
45 Ga0075434_100206649 3300006871 Bacteria 1984
46 Ga0075429_100003912 3300006880 Bacteria 12726
47 Ga0075429_100006279 3300006880 Bacteria 10285
48 Ga0075429_100066615 3300006880 Bacteria 3135
49 Ga0075429_100071909 3300006880 Bacteria 3012
50 Ga0075436_100150420 3300006914 Bacteria 1638
51 Ga0075435_100515611 3300007076 Unclassified 1034
52 Ga0111539_10047002 3300009094 Bacteria 5160
53 Ga0105245_10227791 3300009098 Unclassified 1801
54 Ga0105245_10938311 3300009098 Bacteria 908
55 Ga0114129_10001355 3300009147 Bacteria 32892
56 Ga0114129_10053874 3300009147 Bacteria 5642
57 Ga0114129_10069910 3300009147 Bacteria 4895
58 Ga0114129_10369380 3300009147 Bacteria 1896
59 Ga0105242_10054878 3300009176 Bacteria 3258
60 Ga0105248_10115853 3300009177 Bacteria 3022
61 Ga0157369_10342882 3300013105 Bacteria 1552
62 Ga0157374_10020221 3300013296 Bacteria 5904
63 Ga0157372_10186958 3300013307 Bacteria 2399
64 Ga0157375_10055297 3300013308 Bacteria 3913
65 Ga0157375_10119760 3300013308 Unclassified 2740
66 Ga0163163_10342586 3300014325 Bacteria 1550
67 Ga0157380_10257402 3300014326 Bacteria 1583
68 Ga0157379_10018278 3300014968 Bacteria 6178
69 Ga0157379_10023580 3300014968 Bacteria 5461
70 Ga0207642_10106341 3300025899 Bacteria 1420
71 Ga0207688_10007997 3300025901 Bacteria 5754
72 Ga0207688_10150891 3300025901 Bacteria 1373
73 Ga0207660_10335754 3300025917 Bacteria 1209
74 Ga0207662_10438365 3300025918 Bacteria 891
75 Ga0207657_10112951 3300025919 Bacteria 2241
76 Ga0207652_10361622 3300025921 Bacteria 1310
77 Ga0207687_10400958 3300025927 Bacteria 1128
78 Ga0207700_10462973 3300025928 Bacteria 1119
79 Ga0207690_10155845 3300025932 Bacteria 1698
80 Ga0207706_10369704 3300025933 Bacteria 1245
81 Ga0207704_10350520 3300025938 Bacteria 1149
82 Ga0207691_10121691 3300025940 Bacteria 2312
83 Ga0207691_10223010 3300025940 Bacteria 1634
84 Ga0207711_10149588 3300025941 Bacteria 2106
85 Ga0207689_10309490 3300025942 Bacteria 1310
86 Ga0207712_10103305 3300025961 Bacteria 2123
87 Ga0207640_10167893 3300025981 Bacteria 1632
88 Ga0207677_10444974 3300026023 Bacteria 1109
89 Ga0207639_10584515 3300026041 Bacteria 1028
90 Ga0207702_10313421 3300026078 Bacteria 1492
91 Ga0207648_10008873 3300026089 Bacteria 9680
92 Ga0207676_10136164 3300026095 Bacteria 2096
93 Ga0207675_100033061 3300026118 Bacteria 4819
94 Ga0207675_100069119 3300026118 Bacteria 3301
95 Ga0207683_10181352 3300026121 Bacteria 1909
96 Ga0207698_10402572 3300026142 Bacteria 1308
97 Ga0207698_10778046 3300026142 Bacteria 958
98 Ga0268264_10234294 3300028381 Bacteria 1697
99 Ga0265338_10290362 3300028800 Bacteria 1192
100 Ga0307508_10122626 3300031616 Bacteria 2202
101 Ga0265314_10108054 3300031711 Bacteria 1774
102 Ga0307409_100925144 3300031995 Bacteria 887
103 Ga0373951_0000052 3300035091 Bacteria 46256
104 Ga0373935_0276152 3300035692 Bacteria 1182
105 Ga0373937_0023827 3300036401 Bacteria 5518
106 Ga0373925_0017325 3300037068 Bacteria 5220
107 Ga0495653_0076910 3300046463 Bacteria 2480
108 Ga0495662_0126579 3300046476 Bacteria 1255
109 Ga0495630_0476243 3300046517 Bacteria 957
110 Ga0495640_0072891 3300046533 Bacteria 2300
111 Ga0495613_0386098 3300046689 Bacteria 957
112 Ga0495672_0004671 3300047320 Bacteria 11096
113 Ga0495676_0161073 3300047321 Bacteria 1588
114 Ga0495676_0319775 3300047321 Bacteria 1043
115 Ga0496101_0358349 3300048904 Bacteria 1147
116 Ga0496104_0039103 3300048907 Bacteria 4441
117 Ga0496104_0548645 3300048907 Unclassified 1067
118 Ga0496105_0117886 3300048908 Unclassified 2190
119 Ga0496108_0026245 3300048911 Bacteria 4804
120 Ga0496108_0367207 3300048911 Bacteria 1256
121 Ga0496109_0108176 3300048912 Bacteria 2584
122 Ga0496109_0299196 3300048912 Bacteria 1517
123 Ga0496109_0866418 3300048912 Bacteria 841
124 Ga0496110_0176104 3300048913 Bacteria 1941
125 Ga0496111_0061229 3300048914 Bacteria 2729
126 Ga0496111_0157731 3300048914 Bacteria 1684
127 Ga0496114_0383258 3300048917 Bacteria 1245
128 Ga0496119_0044526 3300048922 Bacteria 2793
129 Ga0501036_0228412 3300049572 Bacteria 1562
130 Ga0501040_0193099 3300049576 Bacteria 1445
131 Ga0501044_0690504 3300049823 Bacteria 907
132 nmdc:mga03n38_6920_c1 3300050490 Bacteria 3981
133 nmdc:mga05p37_186572_c1 3300050507 Bacteria 2521
134 nmdc:mga05p37_378336_c1 3300050507 Bacteria 1660
135 nmdc:mga05p37_9489_c1 3300050507 Bacteria 11520
136 nmdc:mga05p37_993415_c1 3300050507 Bacteria 892
137 nmdc:mga09592_121846_c1 3300050508 Bacteria 1596
138 nmdc:mga09592_2057_c1 3300050508 Bacteria 16210
139 nmdc:mga09592_22160_c1 3300050508 Bacteria 5242
140 nmdc:mga09592_25833_c1 3300050508 Bacteria 4864
141 nmdc:mga0qj67_168893_c1 3300050509 Bacteria 1776
142 nmdc:mga0qj67_38263_c1 3300050509 Bacteria 3763
143 nmdc:mga0qj67_4976_c1 3300050509 Bacteria 9657
144 nmdc:mga06r32_11536_c1 3300050510 Bacteria 7961
145 nmdc:mga06r32_12637_c1 3300050510 Bacteria 7629
146 nmdc:mga06r32_37973_c1 3300050510 Bacteria 4559
147 nmdc:mga08y16_878402_c1 3300050511 Bacteria 884
148 Ga0495601_0042733 3300053077 Bacteria 2845
149 Ga0500635_0070349 3300053080 Bacteria 1240
150 Ga0495619_0231597 3300053085 Bacteria 1280
151 Ga0500656_020387 3300053732 Bacteria 817
152 Ga0530510_0533330 3300061734 Bacteria 891

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009098 Ga0105245_10938311 Ga0105245_109383112 218
2 3300014325 Ga0163163_10342586 Ga0163163_103425862 218
3 3300048912 Ga0496109_0866418 Ga0496109_0866418_60_773 220
4 3300061734 Ga0530510_0533330 Ga0530510_0533330_127_846 236
5 3300026142 Ga0207698_10402572 Ga0207698_104025722 238
6 3300048904 Ga0496101_0358349 Ga0496101_0358349_259_978 238
7 3300048907 Ga0496104_0039103 Ga0496104_0039103_1867_2586 238
8 3300050507 nmdc:mga05p37_993415_c1 nmdc:mga05p37_993415_c1_108_833 239
9 3300050509 nmdc:mga0qj67_168893_c1 nmdc:mga0qj67_168893_c1_475_1200 239
10 3300049823 Ga0501044_0690504 Ga0501044_0690504_112_843 241
11 3300053080 Ga0500635_0070349 Ga0500635_0070349_342_1073 241
12 3300035091 Ga0373951_0000052 Ga0373951_0000052_8267_9004 243
13 3300005983 Ga0081540_1091386 Ga0081540_10913862 244
14 3300005337 Ga0070682_100113479 Ga0070682_1001134792 245
15 3300005366 Ga0070659_100187758 Ga0070659_1001877582 245
16 3300005535 Ga0070684_100468583 Ga0070684_1004685832 245
17 3300005937 Ga0081455_10034342 Ga0081455_100343424 245
18 3300025901 Ga0207688_10150891 Ga0207688_101508912 245
19 3300026023 Ga0207677_10444974 Ga0207677_104449741 245
20 3300026041 Ga0207639_10584515 Ga0207639_105845152 245
21 3300047320 Ga0495672_0004671 Ga0495672_0004671_9407_10150 246
22 3300050511 nmdc:mga08y16_878402_c1 nmdc:mga08y16_878402_c1_90_848 246
23 3300005343 Ga0070687_100204429 Ga0070687_1002044292 247
24 3300005530 Ga0070679_100551667 Ga0070679_1005516672 247
25 3300025918 Ga0207662_10438365 Ga0207662_104383652 247
26 3300025921 Ga0207652_10361622 Ga0207652_103616221 247
27 3300048914 Ga0496111_0157731 Ga0496111_0157731_850_1635 247
28 3300025932 Ga0207690_10155845 Ga0207690_101558453 249
29 3300005329 Ga0070683_100451939 Ga0070683_1004519391 251
30 3300006178 Ga0075367_10100073 Ga0075367_101000732 251
31 3300048907 Ga0496104_0548645 Ga0496104_0548645_37_801 251
32 3300048908 Ga0496105_0117886 Ga0496105_0117886_854_1618 251
33 3300005333 Ga0070677_10099556 Ga0070677_100995562 252
34 3300005544 Ga0070686_100045646 Ga0070686_1000456463 252
35 3300005614 Ga0068856_100073474 Ga0068856_1000734744 252
36 3300026118 Ga0207675_100069119 Ga0207675_1000691193 252
37 3300028800 Ga0265338_10290362 Ga0265338_102903622 252
38 3300031711 Ga0265314_10108054 Ga0265314_101080542 252
39 3300048917 Ga0496114_0383258 Ga0496114_0383258_268_1077 252
40 3300050490 nmdc:mga03n38_6920_c1 nmdc:mga03n38_6920_c1_879_1673 252
41 3300053732 Ga0500656_020387 Ga0500656_020387_24_791 252
42 3300006844 Ga0075428_100211907 Ga0075428_1002119072 253
43 3300006847 Ga0075431_100081747 Ga0075431_1000817475 253
44 3300006847 Ga0075431_100176060 Ga0075431_1001760603 253
45 3300009147 Ga0114129_10369380 Ga0114129_103693802 253
46 3300050507 nmdc:mga05p37_186572_c1 nmdc:mga05p37_186572_c1_1038_1811 253
47 3300005983 Ga0081540_1000498 Ga0081540_100049842 254
48 3300025933 Ga0207706_10369704 Ga0207706_103697042 255
49 3300031616 Ga0307508_10122626 Ga0307508_101226263 255
50 3300048912 Ga0496109_0108176 Ga0496109_0108176_920_1705 255
51 3300005457 Ga0070662_100173913 Ga0070662_1001739131 256
52 3300006048 Ga0075363_100011941 Ga0075363_1000119412 256
53 3300025981 Ga0207640_10167893 Ga0207640_101678933 256
54 3300048911 Ga0496108_0026245 Ga0496108_0026245_392_1171 257
55 3300048912 Ga0496109_0299196 Ga0496109_0299196_467_1243 257
56 3300049572 Ga0501036_0228412 Ga0501036_0228412_230_1009 257
57 3300049576 Ga0501040_0193099 Ga0501040_0193099_399_1178 257
58 3300006844 Ga0075428_100098743 Ga0075428_1000987435 258
59 3300006880 Ga0075429_100066615 Ga0075429_1000666152 258
60 3300009147 Ga0114129_10053874 Ga0114129_100538743 258
61 3300014968 Ga0157379_10018278 Ga0157379_100182783 258
62 3300037068 Ga0373925_0017325 Ga0373925_0017325_3835_4620 258
63 3300048922 Ga0496119_0044526 Ga0496119_0044526_1071_1859 258
64 3300050508 nmdc:mga09592_121846_c1 nmdc:mga09592_121846_c1_279_1076 258
65 3300005543 Ga0070672_100144178 Ga0070672_1001441782 259
66 3300006844 Ga0075428_100040188 Ga0075428_1000401882 259
67 3300006844 Ga0075428_100287410 Ga0075428_1002874102 259
68 3300006846 Ga0075430_100018800 Ga0075430_1000188005 259
69 3300006847 Ga0075431_100044564 Ga0075431_1000445643 259
70 3300006880 Ga0075429_100006279 Ga0075429_1000062796 259
71 3300013308 Ga0157375_10119760 Ga0157375_101197602 259
72 3300014968 Ga0157379_10023580 Ga0157379_100235805 259
73 3300025940 Ga0207691_10223010 Ga0207691_102230103 259
74 3300026142 Ga0207698_10778046 Ga0207698_107780461 259
75 3300028381 Ga0268264_10234294 Ga0268264_102342943 259
76 3300050507 nmdc:mga05p37_378336_c1 nmdc:mga05p37_378336_c1_671_1474 259
77 3300050508 nmdc:mga09592_22160_c1 nmdc:mga09592_22160_c1_3177_3980 259
78 3300050509 nmdc:mga0qj67_4976_c1 nmdc:mga0qj67_4976_c1_7701_8504 259
79 3300050510 nmdc:mga06r32_37973_c1 nmdc:mga06r32_37973_c1_1887_2690 259
80 3300006237 Ga0097621_100134550 Ga0097621_1001345502 260
81 3300031995 Ga0307409_100925144 Ga0307409_1009251441 260
82 3300005981 Ga0081538_10006166 Ga0081538_100061667 261
83 3300025899 Ga0207642_10106341 Ga0207642_101063412 261
84 3300025938 Ga0207704_10350520 Ga0207704_103505202 261
85 3300025941 Ga0207711_10149588 Ga0207711_101495882 261
86 3300025961 Ga0207712_10103305 Ga0207712_101033052 261
87 3300026089 Ga0207648_10008873 Ga0207648_100088735 261
88 3300005937 Ga0081455_10119701 Ga0081455_101197014 262
89 3300005548 Ga0070665_100435361 Ga0070665_1004353612 263
90 3300005618 Ga0068864_100087564 Ga0068864_1000875643 263
91 3300006844 Ga0075428_100220943 Ga0075428_1002209434 263
92 3300006846 Ga0075430_100060594 Ga0075430_1000605945 263
93 3300006880 Ga0075429_100071909 Ga0075429_1000719095 263
94 3300009147 Ga0114129_10069910 Ga0114129_100699102 263
95 3300013105 Ga0157369_10342882 Ga0157369_103428823 263
96 3300013296 Ga0157374_10020221 Ga0157374_100202215 263
97 3300013307 Ga0157372_10186958 Ga0157372_101869583 263
98 3300013308 Ga0157375_10055297 Ga0157375_100552973 263
99 3300025901 Ga0207688_10007997 Ga0207688_100079971 263
100 3300025917 Ga0207660_10335754 Ga0207660_103357542 263
101 3300025919 Ga0207657_10112951 Ga0207657_101129514 263
102 3300026078 Ga0207702_10313421 Ga0207702_103134212 263
103 3300026095 Ga0207676_10136164 Ga0207676_101361643 263
104 3300026121 Ga0207683_10181352 Ga0207683_101813523 263
105 3300046463 Ga0495653_0076910 Ga0495653_0076910_949_1758 263
106 3300048911 Ga0496108_0367207 Ga0496108_0367207_275_1072 263
107 3300048913 Ga0496110_0176104 Ga0496110_0176104_1095_1892 263
108 3300048914 Ga0496111_0061229 Ga0496111_0061229_30_827 263
109 3300050508 nmdc:mga09592_25833_c1 nmdc:mga09592_25833_c1_1275_2072 263
110 3300050510 nmdc:mga06r32_11536_c1 nmdc:mga06r32_11536_c1_2248_3045 263
111 3300053077 Ga0495601_0042733 Ga0495601_0042733_1758_2567 263
112 3300005436 Ga0070713_100274033 Ga0070713_1002740332 264
113 3300009177 Ga0105248_10115853 Ga0105248_101158533 264
114 3300014326 Ga0157380_10257402 Ga0157380_102574022 264
115 3300025928 Ga0207700_10462973 Ga0207700_104629732 264
116 3300025942 Ga0207689_10309490 Ga0207689_103094902 264
117 3300005354 Ga0070675_100050811 Ga0070675_1000508113 265
118 3300005615 Ga0070702_100411857 Ga0070702_1004118571 265
119 3300006844 Ga0075428_100120734 Ga0075428_1001207342 265
120 3300009094 Ga0111539_10047002 Ga0111539_100470024 265
121 3300035692 Ga0373935_0276152 Ga0373935_0276152_97_900 265
122 3300036401 Ga0373937_0023827 Ga0373937_0023827_1311_2114 265
123 3300046476 Ga0495662_0126579 Ga0495662_0126579_363_1166 265
124 3300046517 Ga0495630_0476243 Ga0495630_0476243_109_912 265
125 3300046533 Ga0495640_0072891 Ga0495640_0072891_1029_1832 265
126 3300046689 Ga0495613_0386098 Ga0495613_0386098_46_849 265
127 3300047321 Ga0495676_0161073 Ga0495676_0161073_733_1536 265
128 3300053085 Ga0495619_0231597 Ga0495619_0231597_306_1109 265
129 3300005290 Ga0065712_10157904 Ga0065712_101579041 266
130 3300005330 Ga0070690_100051176 Ga0070690_1000511763 266
131 3300005440 Ga0070705_100220841 Ga0070705_1002208411 266
132 3300005719 Ga0068861_100211015 Ga0068861_1002110151 266
133 3300005937 Ga0081455_10016117 Ga0081455_100161177 266
134 3300005937 Ga0081455_10297168 Ga0081455_102971682 266
135 3300006844 Ga0075428_100001779 Ga0075428_10000177920 266
136 3300006846 Ga0075430_100011162 Ga0075430_1000111627 266
137 3300006847 Ga0075431_100003137 Ga0075431_10000313711 266
138 3300006871 Ga0075434_100206649 Ga0075434_1002066493 266
139 3300006880 Ga0075429_100003912 Ga0075429_1000039127 266
140 3300006914 Ga0075436_100150420 Ga0075436_1001504203 266
141 3300007076 Ga0075435_100515611 Ga0075435_1005156111 266
142 3300009098 Ga0105245_10227791 Ga0105245_102277913 266
143 3300009147 Ga0114129_10001355 Ga0114129_1000135510 266
144 3300009176 Ga0105242_10054878 Ga0105242_100548783 266
145 3300025927 Ga0207687_10400958 Ga0207687_104009581 266
146 3300025940 Ga0207691_10121691 Ga0207691_101216913 266
147 3300026118 Ga0207675_100033061 Ga0207675_1000330613 266
148 3300047321 Ga0495676_0319775 Ga0495676_0319775_95_907 266
149 3300050507 nmdc:mga05p37_9489_c1 nmdc:mga05p37_9489_c1_365_1240 266
150 3300050508 nmdc:mga09592_2057_c1 nmdc:mga09592_2057_c1_6814_7689 266
151 3300050509 nmdc:mga0qj67_38263_c1 nmdc:mga0qj67_38263_c1_500_1375 266
152 3300050510 nmdc:mga06r32_12637_c1 nmdc:mga06r32_12637_c1_6255_7130 266

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01022

HTH_5

Bacterial regulatory protein, arsR family

42

88

0.96

PF12840

HTH_20

Helix-turn-helix domain

40

89

0.94

PF01451

LMWPc

Low molecular weight phosphotyrosine protein phosphatase

142

271

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
8p6m-assembly1.cif.gz_B arsenate reductase (arsc2) from deinococcus indicus 0.9534 119 251
2fxi-assembly1.cif.gz_A arsenate reductase (arsc from pi258) c10s/c15a double mutant with sulfate in its active site 0.937 117 251
1ljl-assembly1.cif.gz_A wild type pi258 s. aureus arsenate reductase 0.9356 120 250
1rxi-assembly1.cif.gz_A pi258 arsenate reductase (arsc) triple mutant c10s/c15a/c82s 0.9335 117 250
2cd7-assembly1.cif.gz_A staphylococcus aureus pi258 arsenate reductase (arsc) h62q mutant 0.9309 117 251
ID Description Score Start End Superfamily
af_Q9VD25_77_142_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9538 38 83 1.10.10.10
af_Q9VG60_1_78_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9493 37 82 1.10.10.10
af_Q2G1P1_1_44_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9469 38 70 1.10.10.10
af_Q58793_322_389_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9464 23 89 1.10.10.10
af_Q2FXF7_1_94_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9455 17 98 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A7V9FCQ7-F1-model_v4 Arsenate reductase ArsC 0.9871 116 198 GO:0046685
AF-A0A4P7XN15-F1-model_v4 Arsenate reductase ArsC 0.9709 120 251 GO:0004726
GO:0030946
GO:0046685
GO:0140793
AF-A0A3A5AML3-F1-model_v4 Arsenate reductase ArsC 0.9698 116 203 GO:0004726
GO:0030946
GO:0046685
GO:0140793
AF-A0A838RKF4-F1-model_v4 Arsenate reductase ArsC 0.9693 116 210 GO:0046685
AF-A0A662PCL3-F1-model_v4 Arsenate reductase ArsC 0.9677 120 224 GO:0046685

Feature Viewer

pLDDT pTM Quality
87.26 0.85 High
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Predicted Structure (AlphaFold2)

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