F214022

General Info

Members Datasets Scaffolds Average Seq Length
152 97 304 171

Family's Representative Sequence

Representative Sequence 3300006846|Ga0075430_100090530|Ga0075430_1000905302
Length 168
Sequence MKTTEWILAQLESEAPRTRRALERVPEGRDDWKPHERSMPLGRLAMLVATMPTWINLIVGQDELDIAPQSGSNDAKPLRTRAELVQALDKGVAEARQVLQNTNDDHLKKPWKLLVAGKVVSEEPREIVLRDTMMHLSHHRGQLTVYLRLNEAPVPSIYGPTADDMQFA

Samples

Sample ID Description Type Environment
1 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
21 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
22 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
23 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
41 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
51 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
69 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
71 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
72 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
73 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
74 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
78 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
79 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
80 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
81 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
82 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
83 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
84 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
85 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
86 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
87 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
88 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
90 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
91 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
92 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
93 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
94 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
95 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
96 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
97 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.34
Metatranscriptomes 0.66
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.63
Rhizosphere 97.37
Stem 0
Stem Tuber 0
Unclassified 22.37

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075430_100090530 3300006846 Unclassified 2559
2 Ga0070658_10041877 3300005327 Bacteria 3695
3 Ga0070690_100305647 3300005330 Bacteria 1142
4 Ga0070670_100564620 3300005331 Bacteria 1016
5 Ga0070680_100139917 3300005336 Bacteria 2029
6 Ga0070680_100658432 3300005336 Unclassified 900
7 Ga0070680_100767574 3300005336 Bacteria 830
8 Ga0070660_100015033 3300005339 Bacteria 5583
9 Ga0070689_100242562 3300005340 Bacteria 1485
10 Ga0070687_100550809 3300005343 Unclassified 785
11 Ga0070675_100200696 3300005354 Bacteria 1731
12 Ga0070675_101374998 3300005354 Unclassified 651
13 Ga0070673_100263635 3300005364 Unclassified 1506
14 Ga0070688_100306414 3300005365 Bacteria 1150
15 Ga0070688_100644834 3300005365 Bacteria 815
16 Ga0070709_10024148 3300005434 Unclassified 3576
17 Ga0070701_10552683 3300005438 Unclassified 755
18 Ga0070711_100043658 3300005439 Bacteria 3038
19 Ga0070705_100077902 3300005440 Bacteria 2026
20 Ga0070700_100633440 3300005441 Unclassified 842
21 Ga0070694_100265784 3300005444 Unclassified 1303
22 Ga0070708_100128181 3300005445 Bacteria 2347
23 Ga0070708_100882401 3300005445 Unclassified 840
24 Ga0070708_101090903 3300005445 Bacteria 748
25 Ga0070685_10069489 3300005466 Bacteria 2083
26 Ga0070706_100411378 3300005467 Unclassified 1259
27 Ga0070706_101271301 3300005467 Unclassified 675
28 Ga0070707_100304070 3300005468 Bacteria 1550
29 Ga0070707_100866685 3300005468 Bacteria 867
30 Ga0070698_100119021 3300005471 Bacteria 2602
31 Ga0070698_100220115 3300005471 Unclassified 1832
32 Ga0070698_100247026 3300005471 Bacteria 1717
33 Ga0070698_100755997 3300005471 Bacteria 915
34 Ga0070699_100370035 3300005518 Bacteria 1293
35 Ga0070697_100165630 3300005536 Bacteria 1869
36 Ga0070697_100229512 3300005536 Bacteria 1583
37 Ga0070697_100375220 3300005536 Bacteria 1231
38 Ga0070697_100539343 3300005536 Bacteria 1022
39 Ga0070672_100234822 3300005543 Bacteria 1541
40 Ga0070695_100225587 3300005545 Unclassified 1352
41 Ga0070696_100054656 3300005546 Bacteria 2783
42 Ga0068855_100034478 3300005563 Bacteria 6036
43 Ga0068852_100235844 3300005616 Bacteria 1746
44 Ga0068859_100081165 3300005617 Bacteria 3285
45 Ga0068870_10507103 3300005840 Bacteria 805
46 Ga0068860_100490390 3300005843 Bacteria 1225
47 Ga0068860_102290591 3300005843 Bacteria 561
48 Ga0081539_10003083 3300005985 Bacteria 21436
49 Ga0070716_100856245 3300006173 Bacteria 708
50 Ga0075428_100819173 3300006844 Bacteria 989
51 Ga0075428_101158733 3300006844 Bacteria 815
52 Ga0075433_10006052 3300006852 Bacteria 9532
53 Ga0075433_10083196 3300006852 Bacteria 2824
54 Ga0075433_10123638 3300006852 Bacteria 2299
55 Ga0075433_10343308 3300006852 Bacteria 1320
56 Ga0075434_100002164 3300006871 Bacteria 17120
57 Ga0075434_100005834 3300006871 Bacteria 11247
58 Ga0075434_100019797 3300006871 Bacteria 6515
59 Ga0075434_100725598 3300006871 Bacteria 1011
60 Ga0075434_101049474 3300006871 Bacteria 829
61 Ga0075429_100000528 3300006880 Bacteria 28990
62 Ga0075429_100132459 3300006880 Bacteria 2181
63 Ga0075436_100000687 3300006914 Bacteria 22291
64 Ga0075436_100002419 3300006914 Bacteria 12864
65 Ga0075436_100038240 3300006914 Bacteria 3312
66 Ga0075436_100054165 3300006914 Bacteria 2769
67 Ga0097620_100081166 3300006931 Bacteria 3285
68 Ga0097620_100281358 3300006931 Bacteria 1756
69 Ga0075435_100000063 3300007076 Bacteria 54855
70 Ga0075435_100008712 3300007076 Bacteria 7300
71 Ga0075435_100041353 3300007076 Bacteria 3684
72 Ga0075435_100095639 3300007076 Unclassified 2456
73 Ga0075435_100751057 3300007076 Bacteria 849
74 Ga0105240_10047865 3300009093 Bacteria 5408
75 Ga0111539_10221503 3300009094 Unclassified 2203
76 Ga0111539_10944948 3300009094 Bacteria 1002
77 Ga0114129_10025034 3300009147 Bacteria 8460
78 Ga0114129_10203470 3300009147 Unclassified 2680
79 Ga0114129_10593352 3300009147 Bacteria 1436
80 Ga0105243_10432255 3300009148 Bacteria 1231
81 Ga0105242_10011759 3300009176 Bacteria 6734
82 Ga0105238_10174463 3300009551 Bacteria 2126
83 Ga0105238_10176953 3300009551 Bacteria 2110
84 Ga0105249_10498594 3300009553 Bacteria 1262
85 Ga0163162_10219337 3300013306 Bacteria 2032
86 Ga0182007_10026182 3300015262 Bacteria 2025
87 Ga0206353_11517958 3300020082 Bacteria 576
88 Ga0207685_10364366 3300025905 Bacteria 732
89 Ga0207699_10052408 3300025906 Bacteria 2415
90 Ga0207705_10018953 3300025909 Bacteria 4921
91 Ga0207684_10353038 3300025910 Unclassified 1266
92 Ga0207684_10753104 3300025910 Unclassified 825
93 Ga0207660_10098026 3300025917 Bacteria 2186
94 Ga0207657_10004040 3300025919 Bacteria 15583
95 Ga0207646_10505888 3300025922 Bacteria 1088
96 Ga0207646_10826829 3300025922 Bacteria 824
97 Ga0207686_10000185 3300025934 Bacteria 48180
98 Ga0207709_10168850 3300025935 Bacteria 1533
99 Ga0207670_10181835 3300025936 Bacteria 1584
100 Ga0207704_10775798 3300025938 Bacteria 799
101 Ga0207665_10144772 3300025939 Bacteria 1698
102 Ga0207665_10415273 3300025939 Unclassified 1027
103 Ga0207712_10393755 3300025961 Bacteria 1162
104 Ga0207703_10389785 3300026035 Bacteria 1290
105 Ga0207702_10432620 3300026078 Bacteria 1274
106 Ga0207698_11175760 3300026142 Bacteria 781
107 Ga0207428_10128098 3300027907 Unclassified 1943
108 Ga0268264_10467209 3300028381 Bacteria 1225
109 Ga0265316_10071425 3300031344 Bacteria 2676
110 Ga0373936_0347887 3300035113 Unclassified 675
111 Ga0451577_0063600 3300042876 Unclassified 3290
112 Ga0453683_0132494 3300044673 Unclassified 1571
113 Ga0453684_0093512 3300044712 Bacteria 3703
114 Ga0451576_0090563 3300045051 Unclassified 3181
115 Ga0451576_0238327 3300045051 Bacteria 1900
116 Ga0451576_0708167 3300045051 Unclassified 1058
117 Ga0451576_1550008 3300045051 Bacteria 688
118 Ga0466967_0590321 3300045976 Bacteria 1096
119 Ga0495662_0058202 3300046476 Bacteria 1867
120 Ga0495618_0134838 3300046514 Bacteria 1580
121 Ga0495628_0322208 3300046516 Bacteria 1140
122 Ga0495630_0970716 3300046517 Unclassified 646
123 Ga0495586_0316153 3300046535 Bacteria 895
124 Ga0495586_0318583 3300046535 Unclassified 892
125 Ga0495586_0332727 3300046535 Bacteria 871
126 Ga0495635_0615472 3300046663 Unclassified 708
127 Ga0495658_0002093 3300046683 Bacteria 10134
128 Ga0496102_0193439 3300048905 Bacteria 1917
129 Ga0496106_0378707 3300048909 Bacteria 1137
130 Ga0496112_0290848 3300048915 Bacteria 1580
131 Ga0496114_0539675 3300048917 Bacteria 1031
132 Ga0501038_0825681 3300049574 Bacteria 688
133 Ga0501075_0145517 3300049591 Unclassified 1806
134 nmdc:mga05p37_248202_c1 3300050507 Bacteria 2136
135 nmdc:mga05p37_5962_c1 3300050507 Bacteria 14340
136 nmdc:mga05p37_88614_c1 3300050507 Unclassified 3814
137 nmdc:mga09592_2040_c1 3300050508 Bacteria 16283
138 nmdc:mga09592_73436_c1 3300050508 Bacteria 2906
139 nmdc:mga0qj67_79583_c1 3300050509 Unclassified 2625
140 nmdc:mga08y16_111627_c1 3300050511 Unclassified 2846
141 nmdc:mga0n895_143848_c1 3300050512 Bacteria 2414
142 nmdc:mga0n895_15636_c1 3300050512 Bacteria 6929
143 nmdc:mga0n895_214735_c1 3300050512 Bacteria 1953
144 nmdc:mga0n895_649769_c1 3300050512 Bacteria 1054
145 nmdc:mga0rr50_294910_c1 3300050513 Bacteria 1356
146 nmdc:mga0rr50_6287_c1 3300050513 Bacteria 7210
147 nmdc:mga08x19_246560_c1 3300050514 Bacteria 1232
148 nmdc:mga08x19_62532_c1 3300050514 Bacteria 2414
149 nmdc:mga08x19_77088_c1 3300050514 Bacteria 2183
150 nmdc:mga0a205_140398_c1 3300050515 Bacteria 2316
151 nmdc:mga0a205_17333_c1 3300050515 Bacteria 6749
152 nmdc:mga0a205_277379_c1 3300050515 Unclassified 1552
153 Ga0075430_100090530
154 Ga0070658_10041877
155 Ga0070690_100305647
156 Ga0070670_100564620
157 Ga0070680_100139917
158 Ga0070680_100658432
159 Ga0070680_100767574
160 Ga0070660_100015033
161 Ga0070689_100242562
162 Ga0070687_100550809
163 Ga0070675_100200696
164 Ga0070675_101374998
165 Ga0070673_100263635
166 Ga0070688_100306414
167 Ga0070688_100644834
168 Ga0070709_10024148
169 Ga0070701_10552683
170 Ga0070711_100043658
171 Ga0070705_100077902
172 Ga0070700_100633440
173 Ga0070694_100265784
174 Ga0070708_100128181
175 Ga0070708_100882401
176 Ga0070708_101090903
177 Ga0070685_10069489
178 Ga0070706_100411378
179 Ga0070706_101271301
180 Ga0070707_100304070
181 Ga0070707_100866685
182 Ga0070698_100119021
183 Ga0070698_100220115
184 Ga0070698_100247026
185 Ga0070698_100755997
186 Ga0070699_100370035
187 Ga0070697_100165630
188 Ga0070697_100229512
189 Ga0070697_100375220
190 Ga0070697_100539343
191 Ga0070672_100234822
192 Ga0070695_100225587
193 Ga0070696_100054656
194 Ga0068855_100034478
195 Ga0068852_100235844
196 Ga0068859_100081165
197 Ga0068870_10507103
198 Ga0068860_100490390
199 Ga0068860_102290591
200 Ga0081539_10003083
201 Ga0070716_100856245
202 Ga0075428_100819173
203 Ga0075428_101158733
204 Ga0075433_10006052
205 Ga0075433_10083196
206 Ga0075433_10123638
207 Ga0075433_10343308
208 Ga0075434_100002164
209 Ga0075434_100005834
210 Ga0075434_100019797
211 Ga0075434_100725598
212 Ga0075434_101049474
213 Ga0075429_100000528
214 Ga0075429_100132459
215 Ga0075436_100000687
216 Ga0075436_100002419
217 Ga0075436_100038240
218 Ga0075436_100054165
219 Ga0097620_100081166
220 Ga0097620_100281358
221 Ga0075435_100000063
222 Ga0075435_100008712
223 Ga0075435_100041353
224 Ga0075435_100095639
225 Ga0075435_100751057
226 Ga0105240_10047865
227 Ga0111539_10221503
228 Ga0111539_10944948
229 Ga0114129_10025034
230 Ga0114129_10203470
231 Ga0114129_10593352
232 Ga0105243_10432255
233 Ga0105242_10011759
234 Ga0105238_10174463
235 Ga0105238_10176953
236 Ga0105249_10498594
237 Ga0163162_10219337
238 Ga0182007_10026182
239 Ga0206353_11517958
240 Ga0207685_10364366
241 Ga0207699_10052408
242 Ga0207705_10018953
243 Ga0207684_10353038
244 Ga0207684_10753104
245 Ga0207660_10098026
246 Ga0207657_10004040
247 Ga0207646_10505888
248 Ga0207646_10826829
249 Ga0207686_10000185
250 Ga0207709_10168850
251 Ga0207670_10181835
252 Ga0207704_10775798
253 Ga0207665_10144772
254 Ga0207665_10415273
255 Ga0207712_10393755
256 Ga0207703_10389785
257 Ga0207702_10432620
258 Ga0207698_11175760
259 Ga0207428_10128098
260 Ga0268264_10467209
261 Ga0265316_10071425
262 Ga0373936_0347887
263 Ga0451577_0063600
264 Ga0453683_0132494
265 Ga0453684_0093512
266 Ga0451576_0090563
267 Ga0451576_0238327
268 Ga0451576_0708167
269 Ga0451576_1550008
270 Ga0466967_0590321
271 Ga0495662_0058202
272 Ga0495618_0134838
273 Ga0495628_0322208
274 Ga0495630_0970716
275 Ga0495586_0316153
276 Ga0495586_0318583
277 Ga0495586_0332727
278 Ga0495635_0615472
279 Ga0495658_0002093
280 Ga0496102_0193439
281 Ga0496106_0378707
282 Ga0496112_0290848
283 Ga0496114_0539675
284 Ga0501038_0825681
285 Ga0501075_0145517
286 nmdc:mga05p37_248202_c1
287 nmdc:mga05p37_5962_c1
288 nmdc:mga05p37_88614_c1
289 nmdc:mga09592_2040_c1
290 nmdc:mga09592_73436_c1
291 nmdc:mga0qj67_79583_c1
292 nmdc:mga08y16_111627_c1
293 nmdc:mga0n895_143848_c1
294 nmdc:mga0n895_15636_c1
295 nmdc:mga0n895_214735_c1
296 nmdc:mga0n895_649769_c1
297 nmdc:mga0rr50_294910_c1
298 nmdc:mga0rr50_6287_c1
299 nmdc:mga08x19_246560_c1
300 nmdc:mga08x19_62532_c1
301 nmdc:mga08x19_77088_c1
302 nmdc:mga0a205_140398_c1
303 nmdc:mga0a205_17333_c1
304 nmdc:mga0a205_277379_c1

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05163

DinB

DinB family

1

167

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dka-assembly1.cif.gz_B crystal structure of a dinb-like protein (yjoa, bsu12410) from bacillus subtilis at 2.30 a resolution 0.7948 6 167
6iz2-assembly1.cif.gz_A crystal structure of dinb/yfit protein dr0053 from d. radiodurans r1 0.7877 3 159
3dka-assembly1.cif.gz_B crystal structure of a dinb-like protein (yjoa, bsu12410) from bacillus subtilis at 2.30 a resolution 0.7866 6 167
3di5-assembly1.cif.gz_A crystal structure of a dinb-like protein (bce_4655) from bacillus cereus atcc 10987 at 2.01 a resolution 0.7823 7 159
3dka-assembly1.cif.gz_A crystal structure of a dinb-like protein (yjoa, bsu12410) from bacillus subtilis at 2.30 a resolution 0.7686 6 168
ID Description Score Start End Superfamily
2hkvA01 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7944 1 152 1.20.120.450
3dkaA01 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7901 6 151 1.20.120.450
2hkvA01 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7794 1 152 1.20.120.450
3di5A00 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7761 5 159 1.20.120.450
3dkaA01 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);dinb family like domain 0.7739 6 151 1.20.120.450
ID Description Score Start End GO Terms
AF-A0A2V8DE70-F1-model_v4 Damage-inducible protein DinB 0.9854 1 98
AF-A0A2V8Q9Y2-F1-model_v4 Damage-inducible protein DinB 0.9785 1 169
AF-A0A428MHU5-F1-model_v4 DinB family protein 0.9729 1 166
AF-A0A410G644-F1-model_v4 Damage-inducible protein DinB 0.966 1 166
AF-A0A2V9AKJ3-F1-model_v4 Damage-inducible protein DinB 0.9648 1 167

Map