F212635

General Info

Members Datasets Scaffolds Average Seq Length
151 114 151 147

Family's Representative Sequence

Representative Sequence 3300048917|Ga0496114_0000085|Ga0496114_0000085_59680_60213
Length 177
Sequence LIRPRSGNASEKLAGLLSPLPKIVGGRARSSTIVASLIDTNVLVYRFDPRFPQKQHAAEALLRWGLIGDDLQVPHQSLIEFISVVTRPTKNRAPLLPMNEALQEVELLLRQFTILYPTEEVLRTALRGVVAYQLSWFDAHLLAYAEVYGLASLISEDFQHGRRYGTVTAVNPFIENQ

Samples

Sample ID Description Type Environment
1 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
21 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
22 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
34 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
35 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
36 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
37 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
51 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
52 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
53 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
54 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
55 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
56 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
57 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
58 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
59 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
60 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
61 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
62 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
63 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
64 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
65 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
66 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
67 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
68 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
69 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
70 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
71 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
72 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
74 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
75 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
76 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
77 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
78 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
81 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
82 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
83 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
84 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
85 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
86 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
89 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
93 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
94 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
95 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
96 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
97 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
98 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
99 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
100 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
101 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
102 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
103 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
104 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
105 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
106 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
107 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
108 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
109 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
110 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
111 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
113 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
114 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.32
Nodule 0
Rhizoplane 0.66
Rhizosphere 97.35
Stem 0
Stem Tuber 0
Unclassified 0.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10257699 3300005295 Bacteria 1106
2 Ga0070683_100000011 3300005329 Bacteria 283682
3 Ga0070683_101641035 3300005329 Unclassified 618
4 Ga0070660_100408539 3300005339 Unclassified 1123
5 Ga0070713_100065966 3300005436 Bacteria 3043
6 Ga0070713_100105935 3300005436 Bacteria 2443
7 Ga0070713_100565047 3300005436 Unclassified 1078
8 Ga0070713_100743512 3300005436 Unclassified 938
9 Ga0070710_10075409 3300005437 Unclassified 1954
10 Ga0070708_100036309 3300005445 Bacteria 4298
11 Ga0070678_100459694 3300005456 Unclassified 1116
12 Ga0070679_100406012 3300005530 Unclassified 1308
13 Ga0070684_100000001 3300005535 Bacteria 300240
14 Ga0070684_100487636 3300005535 Unclassified 1141
15 Ga0070696_100555871 3300005546 Unclassified 920
16 Ga0068855_100072583 3300005563 Unclassified 4000
17 Ga0068856_100320365 3300005614 Bacteria 1567
18 Ga0068852_100734390 3300005616 Unclassified 999
19 Ga0068864_100631735 3300005618 Unclassified 1041
20 Ga0068863_100681500 3300005841 Unclassified 1021
21 Ga0068863_100799984 3300005841 Bacteria 940
22 Ga0081455_10045592 3300005937 Bacteria 3813
23 Ga0070717_10504982 3300006028 Bacteria 1093
24 Ga0070717_10905716 3300006028 Unclassified 803
25 Ga0097621_100496974 3300006237 Bacteria 1104
26 Ga0068871_100126073 3300006358 Unclassified 2167
27 Ga0068871_100409189 3300006358 Bacteria 1209
28 Ga0068871_100651683 3300006358 Unclassified 961
29 Ga0075433_10513430 3300006852 Bacteria 1054
30 Ga0075434_101526342 3300006871 Unclassified 677
31 Ga0075434_101762480 3300006871 Unclassified 626
32 Ga0075436_100031426 3300006914 Bacteria 3656
33 Ga0075436_100687397 3300006914 Unclassified 757
34 Ga0105240_10046626 3300009093 Bacteria 5491
35 Ga0105240_10363167 3300009093 Bacteria 1639
36 Ga0114129_10122214 3300009147 Unclassified 3583
37 Ga0114129_10765133 3300009147 Unclassified 1235
38 Ga0105243_10308084 3300009148 Bacteria 1438
39 Ga0105241_10768872 3300009174 Bacteria 885
40 Ga0105242_10069135 3300009176 Bacteria 2924
41 Ga0105248_10056100 3300009177 Bacteria 4419
42 Ga0105248_10349795 3300009177 Unclassified 1664
43 Ga0105248_10944494 3300009177 Unclassified 974
44 Ga0105239_10020813 3300010375 Bacteria 7239
45 Ga0105239_11389636 3300010375 Unclassified 810
46 Ga0105246_10797072 3300011119 Unclassified 838
47 Ga0157369_10619038 3300013105 Unclassified 1117
48 Ga0157374_10960552 3300013296 Unclassified 873
49 Ga0157378_11819628 3300013297 Bacteria 657
50 Ga0163162_10009582 3300013306 Bacteria 9423
51 Ga0157376_10099023 3300014969 Unclassified 2542
52 Ga0224572_1013000 3300024225 Bacteria 1587
53 Ga0207699_10001757 3300025906 Bacteria 10233
54 Ga0207699_10110501 3300025906 Unclassified 1761
55 Ga0207684_10477831 3300025910 Unclassified 1069
56 Ga0207654_10487932 3300025911 Unclassified 868
57 Ga0207695_10067975 3300025913 Bacteria 3652
58 Ga0207695_10142789 3300025913 Bacteria 2341
59 Ga0207695_10371819 3300025913 Unclassified 1315
60 Ga0207646_11602700 3300025922 Unclassified 561
61 Ga0207686_10075708 3300025934 Bacteria 2180
62 Ga0207665_10336506 3300025939 Bacteria 1136
63 Ga0207661_10000016 3300025944 Bacteria 305159
64 Ga0207667_10127212 3300025949 Bacteria 2625
65 Ga0207702_10029792 3300026078 Bacteria 4543
66 Ga0207702_10127749 3300026078 Bacteria 2284
67 Ga0207641_10805775 3300026088 Bacteria 929
68 Ga0207676_10585334 3300026095 Unclassified 1070
69 Ga0207683_10284126 3300026121 Unclassified 1512
70 Ga0265318_10000050 3300028577 Bacteria 118340
71 Ga0265330_10000053 3300031235 Bacteria 101473
72 Ga0265332_10000914 3300031238 Bacteria 17743
73 Ga0265328_10017291 3300031239 Bacteria 2793
74 Ga0265320_10000006 3300031240 Bacteria 333442
75 Ga0265329_10004774 3300031242 Bacteria 5570
76 Ga0265339_10008808 3300031249 Bacteria 6387
77 Ga0265331_10000004 3300031250 Bacteria 476985
78 Ga0265313_10000217 3300031595 Bacteria 61945
79 Ga0265314_10000014 3300031711 Bacteria 400363
80 Ga0265314_10064093 3300031711 Bacteria 2490
81 Ga0265342_10007149 3300031712 Bacteria 8216
82 Ga0316576_10023408 3300031727 Unclassified 4302
83 Ga0307415_100188955 3300032126 Bacteria 1624
84 Ga0373954_0016076 3300035118 Bacteria 3348
85 Ga0373956_0037773 3300035119 Bacteria 2135
86 Ga0373957_0029278 3300035120 Bacteria 2011
87 Ga0373955_0063098 3300035172 Bacteria 2051
88 Ga0373961_0057748 3300035241 Bacteria 1168
89 Ga0373924_0101625 3300035410 Bacteria 1237
90 Ga0373931_0251338 3300035691 Unclassified 1075
91 Ga0373927_0004310 3300035695 Bacteria 9982
92 Ga0373927_0591220 3300035695 Bacteria 734
93 Ga0373947_0002486 3300035725 Bacteria 11084
94 Ga0373937_0000844 3300036401 Bacteria 26258
95 Ga0373937_1268903 3300036401 Bacteria 685
96 Ga0373925_0000581 3300037068 Bacteria 35369
97 Ga0436365_1179444 3300039437 Unclassified 621
98 Ga0466966_0851022 3300044684 Unclassified 550
99 Ga0466963_0111545 3300044694 Bacteria 1878
100 Ga0451576_0203642 3300045051 Bacteria 2067
101 Ga0466958_0277375 3300045836 Bacteria 1074
102 Ga0466967_0942245 3300045976 Unclassified 859
103 Ga0495662_0169405 3300046476 Unclassified 1076
104 Ga0495586_0367948 3300046535 Unclassified 826
105 Ga0495658_0433910 3300046683 Unclassified 839
106 Ga0495624_0087846 3300046690 Bacteria 1920
107 Ga0495636_0035592 3300047318 Bacteria 2051
108 Ga0496114_0000085 3300048917 Bacteria 67056
109 Ga0501036_0038739 3300049572 Bacteria 4035
110 Ga0501038_0007712 3300049574 Bacteria 9923
111 Ga0501039_0042250 3300049575 Bacteria 3522
112 Ga0501040_0001487 3300049576 Bacteria 14866
113 Ga0501042_0006759 3300049578 Bacteria 7475
114 Ga0501048_0303770 3300049582 Bacteria 1135
115 Ga0501067_0309837 3300049583 Bacteria 879
116 Ga0501068_0040501 3300049584 Bacteria 2797
117 Ga0501071_0059321 3300049587 Bacteria 2769
118 Ga0501072_0020069 3300049588 Bacteria 5174
119 Ga0501072_0615340 3300049588 Unclassified 856
120 Ga0501075_0000162 3300049591 Bacteria 34354
121 Ga0501075_0009829 3300049591 Bacteria 6704
122 Ga0501075_0327276 3300049591 Unclassified 1168
123 Ga0501076_0000007 3300049592 Bacteria 122894
124 Ga0501076_0217382 3300049592 Unclassified 1562
125 Ga0501077_0000281 3300049593 Bacteria 30339
126 Ga0501077_0539508 3300049593 Bacteria 748
127 Ga0501079_0007696 3300049741 Bacteria 8153
128 Ga0501080_0003529 3300049742 Bacteria 13779
129 Ga0501080_0013044 3300049742 Bacteria 7631
130 Ga0501080_0060035 3300049742 Bacteria 3539
131 Ga0501081_0068016 3300049743 Bacteria 2479
132 Ga0501081_0210866 3300049743 Unclassified 1411
133 Ga0501083_0152679 3300049744 Bacteria 1512
134 Ga0501045_0093392 3300049824 Unclassified 2225
135 nmdc:mga05p37_1068041_c1 3300050507 Unclassified 849
136 nmdc:mga0n895_1482785_c1 3300050512 Unclassified 645
137 nmdc:mga0n895_51141_c1 3300050512 Bacteria 4053
138 nmdc:mga08x19_1369810_c1 3300050514 Unclassified 501
139 nmdc:mga08x19_19475_c1 3300050514 Bacteria 4165
140 Ga0495595_0252014 3300053084 Bacteria 884
141 Ga0495619_0090967 3300053085 Bacteria 2066
142 Ga0500597_238611 3300053120 Unclassified 749
143 Ga0500636_0068963 3300053177 Bacteria 2053
144 Ga0501084_0010857 3300054114 Bacteria 7544
145 Ga0501084_0255526 3300054114 Unclassified 1479
146 Ga0501082_0000267 3300060353 Bacteria 45938
147 Ga0501082_0003392 3300060353 Bacteria 13905
148 Ga0501082_0163226 3300060353 Bacteria 1936
149 Ga0466962_0450677 3300061719 Unclassified 648
150 Ga0530510_0000003 3300061734 Bacteria 268332
151 Ga0530510_0318153 3300061734 Unclassified 1166

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300011119 Ga0105246_10797072 Ga0105246_107970722 136
2 3300005329 Ga0070683_100000011 Ga0070683_1000000115 140
3 3300005329 Ga0070683_101641035 Ga0070683_1016410351 140
4 3300005339 Ga0070660_100408539 Ga0070660_1004085391 140
5 3300005436 Ga0070713_100565047 Ga0070713_1005650471 140
6 3300005436 Ga0070713_100743512 Ga0070713_1007435122 140
7 3300005456 Ga0070678_100459694 Ga0070678_1004596942 140
8 3300005535 Ga0070684_100000001 Ga0070684_100000001253 140
9 3300005535 Ga0070684_100487636 Ga0070684_1004876363 140
10 3300005563 Ga0068855_100072583 Ga0068855_1000725833 140
11 3300005614 Ga0068856_100320365 Ga0068856_1003203652 140
12 3300005616 Ga0068852_100734390 Ga0068852_1007343902 140
13 3300005618 Ga0068864_100631735 Ga0068864_1006317351 140
14 3300005841 Ga0068863_100681500 Ga0068863_1006815002 140
15 3300005841 Ga0068863_100799984 Ga0068863_1007999842 140
16 3300005937 Ga0081455_10045592 Ga0081455_100455922 140
17 3300006028 Ga0070717_10504982 Ga0070717_105049822 140
18 3300006028 Ga0070717_10905716 Ga0070717_109057161 140
19 3300006358 Ga0068871_100409189 Ga0068871_1004091892 140
20 3300006358 Ga0068871_100651683 Ga0068871_1006516832 140
21 3300006914 Ga0075436_100687397 Ga0075436_1006873971 140
22 3300009093 Ga0105240_10363167 Ga0105240_103631672 140
23 3300009148 Ga0105243_10308084 Ga0105243_103080842 140
24 3300009174 Ga0105241_10768872 Ga0105241_107688721 140
25 3300009176 Ga0105242_10069135 Ga0105242_100691352 140
26 3300009177 Ga0105248_10944494 Ga0105248_109444943 140
27 3300010375 Ga0105239_11389636 Ga0105239_113896362 140
28 3300013105 Ga0157369_10619038 Ga0157369_106190383 140
29 3300013306 Ga0163162_10009582 Ga0163162_100095824 140
30 3300014969 Ga0157376_10099023 Ga0157376_100990232 140
31 3300025906 Ga0207699_10110501 Ga0207699_101105012 140
32 3300025911 Ga0207654_10487932 Ga0207654_104879321 140
33 3300025913 Ga0207695_10142789 Ga0207695_101427893 140
34 3300025922 Ga0207646_11602700 Ga0207646_116027001 140
35 3300025934 Ga0207686_10075708 Ga0207686_100757082 140
36 3300025944 Ga0207661_10000016 Ga0207661_10000016255 140
37 3300025949 Ga0207667_10127212 Ga0207667_101272123 140
38 3300026078 Ga0207702_10127749 Ga0207702_101277493 140
39 3300026088 Ga0207641_10805775 Ga0207641_108057751 140
40 3300026095 Ga0207676_10585334 Ga0207676_105853343 140
41 3300026121 Ga0207683_10284126 Ga0207683_102841261 140
42 3300035695 Ga0373927_0004310 Ga0373927_0004310_2640_3071 140
43 3300035725 Ga0373947_0002486 Ga0373947_0002486_3601_4032 140
44 3300037068 Ga0373925_0000581 Ga0373925_0000581_11974_12405 140
45 3300044684 Ga0466966_0851022 Ga0466966_0851022_53_487 140
46 3300044694 Ga0466963_0111545 Ga0466963_0111545_1185_1619 140
47 3300045051 Ga0451576_0203642 Ga0451576_0203642_335_766 140
48 3300045836 Ga0466958_0277375 Ga0466958_0277375_175_609 140
49 3300046476 Ga0495662_0169405 Ga0495662_0169405_271_702 140
50 3300046690 Ga0495624_0087846 Ga0495624_0087846_759_1190 140
51 3300047318 Ga0495636_0035592 Ga0495636_0035592_1518_1946 140
52 3300050514 nmdc:mga08x19_1369810_c1 nmdc:mga08x19_1369810_c1_37_477 140
53 3300061719 Ga0466962_0450677 Ga0466962_0450677_102_536 140
54 3300005295 Ga0065707_10257699 Ga0065707_102576992 141
55 3300005436 Ga0070713_100065966 Ga0070713_1000659662 141
56 3300005436 Ga0070713_100105935 Ga0070713_1001059355 141
57 3300005437 Ga0070710_10075409 Ga0070710_100754092 141
58 3300005445 Ga0070708_100036309 Ga0070708_1000363095 141
59 3300005530 Ga0070679_100406012 Ga0070679_1004060122 141
60 3300005546 Ga0070696_100555871 Ga0070696_1005558711 141
61 3300006237 Ga0097621_100496974 Ga0097621_1004969743 141
62 3300006358 Ga0068871_100126073 Ga0068871_1001260732 141
63 3300006852 Ga0075433_10513430 Ga0075433_105134302 141
64 3300006871 Ga0075434_101526342 Ga0075434_1015263422 141
65 3300006871 Ga0075434_101762480 Ga0075434_1017624802 141
66 3300006914 Ga0075436_100031426 Ga0075436_1000314263 141
67 3300009093 Ga0105240_10046626 Ga0105240_100466263 141
68 3300009147 Ga0114129_10122214 Ga0114129_101222145 141
69 3300009147 Ga0114129_10765133 Ga0114129_107651332 141
70 3300009177 Ga0105248_10056100 Ga0105248_100561002 141
71 3300009177 Ga0105248_10349795 Ga0105248_103497952 141
72 3300010375 Ga0105239_10020813 Ga0105239_100208137 141
73 3300013296 Ga0157374_10960552 Ga0157374_109605522 141
74 3300013297 Ga0157378_11819628 Ga0157378_118196281 141
75 3300024225 Ga0224572_1013000 Ga0224572_10130002 141
76 3300025906 Ga0207699_10001757 Ga0207699_100017576 141
77 3300025910 Ga0207684_10477831 Ga0207684_104778312 141
78 3300025913 Ga0207695_10067975 Ga0207695_100679753 141
79 3300025913 Ga0207695_10371819 Ga0207695_103718192 141
80 3300025939 Ga0207665_10336506 Ga0207665_103365063 141
81 3300026078 Ga0207702_10029792 Ga0207702_100297923 141
82 3300028577 Ga0265318_10000050 Ga0265318_1000005019 141
83 3300031235 Ga0265330_10000053 Ga0265330_1000005347 141
84 3300031238 Ga0265332_10000914 Ga0265332_100009149 141
85 3300031239 Ga0265328_10017291 Ga0265328_100172915 141
86 3300031240 Ga0265320_10000006 Ga0265320_10000006127 141
87 3300031242 Ga0265329_10004774 Ga0265329_100047743 141
88 3300031249 Ga0265339_10008808 Ga0265339_100088085 141
89 3300031250 Ga0265331_10000004 Ga0265331_10000004262 141
90 3300031595 Ga0265313_10000217 Ga0265313_1000021718 141
91 3300031711 Ga0265314_10000014 Ga0265314_10000014165 141
92 3300031711 Ga0265314_10064093 Ga0265314_100640933 141
93 3300031712 Ga0265342_10007149 Ga0265342_100071496 141
94 3300031727 Ga0316576_10023408 Ga0316576_100234083 141
95 3300032126 Ga0307415_100188955 Ga0307415_1001889552 141
96 3300035118 Ga0373954_0016076 Ga0373954_0016076_813_1241 141
97 3300035119 Ga0373956_0037773 Ga0373956_0037773_1098_1526 141
98 3300035120 Ga0373957_0029278 Ga0373957_0029278_1491_1919 141
99 3300035172 Ga0373955_0063098 Ga0373955_0063098_682_1110 141
100 3300035241 Ga0373961_0057748 Ga0373961_0057748_262_693 141
101 3300035410 Ga0373924_0101625 Ga0373924_0101625_756_1184 141
102 3300035691 Ga0373931_0251338 Ga0373931_0251338_94_522 141
103 3300035695 Ga0373927_0591220 Ga0373927_0591220_194_670 141
104 3300036401 Ga0373937_0000844 Ga0373937_0000844_3308_3736 141
105 3300036401 Ga0373937_1268903 Ga0373937_1268903_202_675 141
106 3300039437 Ga0436365_1179444 Ga0436365_1179444_146_580 141
107 3300045976 Ga0466967_0942245 Ga0466967_0942245_209_637 141
108 3300046535 Ga0495586_0367948 Ga0495586_0367948_344_775 141
109 3300046683 Ga0495658_0433910 Ga0495658_0433910_384_815 141
110 3300048917 Ga0496114_0000085 Ga0496114_0000085_59680_60213 141
111 3300049572 Ga0501036_0038739 Ga0501036_0038739_1195_1632 141
112 3300049574 Ga0501038_0007712 Ga0501038_0007712_5757_6194 141
113 3300049575 Ga0501039_0042250 Ga0501039_0042250_990_1427 141
114 3300049576 Ga0501040_0001487 Ga0501040_0001487_5250_5687 141
115 3300049578 Ga0501042_0006759 Ga0501042_0006759_2087_2524 141
116 3300049582 Ga0501048_0303770 Ga0501048_0303770_638_1075 141
117 3300049583 Ga0501067_0309837 Ga0501067_0309837_132_647 141
118 3300049584 Ga0501068_0040501 Ga0501068_0040501_349_864 141
119 3300049587 Ga0501071_0059321 Ga0501071_0059321_573_1016 141
120 3300049588 Ga0501072_0020069 Ga0501072_0020069_4613_5050 141
121 3300049588 Ga0501072_0615340 Ga0501072_0615340_12_455 141
122 3300049591 Ga0501075_0000162 Ga0501075_0000162_17102_17617 141
123 3300049591 Ga0501075_0009829 Ga0501075_0009829_131_568 141
124 3300049591 Ga0501075_0327276 Ga0501075_0327276_28_471 141
125 3300049592 Ga0501076_0000007 Ga0501076_0000007_16902_17339 141
126 3300049592 Ga0501076_0217382 Ga0501076_0217382_443_886 141
127 3300049593 Ga0501077_0000281 Ga0501077_0000281_25154_25669 141
128 3300049593 Ga0501077_0539508 Ga0501077_0539508_13_450 141
129 3300049741 Ga0501079_0007696 Ga0501079_0007696_5918_6355 141
130 3300049742 Ga0501080_0003529 Ga0501080_0003529_7909_8424 141
131 3300049742 Ga0501080_0013044 Ga0501080_0013044_4701_5138 141
132 3300049742 Ga0501080_0060035 Ga0501080_0060035_2467_2910 141
133 3300049743 Ga0501081_0068016 Ga0501081_0068016_1933_2370 141
134 3300049743 Ga0501081_0210866 Ga0501081_0210866_914_1357 141
135 3300049744 Ga0501083_0152679 Ga0501083_0152679_973_1410 141
136 3300049824 Ga0501045_0093392 Ga0501045_0093392_1616_2053 141
137 3300050507 nmdc:mga05p37_1068041_c1 nmdc:mga05p37_1068041_c1_108_554 141
138 3300050512 nmdc:mga0n895_1482785_c1 nmdc:mga0n895_1482785_c1_88_519 141
139 3300050512 nmdc:mga0n895_51141_c1 nmdc:mga0n895_51141_c1_1081_1545 141
140 3300050514 nmdc:mga08x19_19475_c1 nmdc:mga08x19_19475_c1_821_1270 141
141 3300053084 Ga0495595_0252014 Ga0495595_0252014_266_694 141
142 3300053085 Ga0495619_0090967 Ga0495619_0090967_116_544 141
143 3300053120 Ga0500597_238611 Ga0500597_238611_10_480 141
144 3300053177 Ga0500636_0068963 Ga0500636_0068963_897_1367 141
145 3300054114 Ga0501084_0010857 Ga0501084_0010857_1339_1776 141
146 3300054114 Ga0501084_0255526 Ga0501084_0255526_345_788 141
147 3300060353 Ga0501082_0000267 Ga0501082_0000267_33596_34045 141
148 3300060353 Ga0501082_0003392 Ga0501082_0003392_11268_11705 141
149 3300060353 Ga0501082_0163226 Ga0501082_0163226_110_553 141
150 3300061734 Ga0530510_0000003 Ga0530510_0000003_115032_115469 141
151 3300061734 Ga0530510_0318153 Ga0530510_0318153_362_805 141

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01850

PIN

PIN domain

36

165

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
7by2-assembly1.cif.gz_B-2 toxin-antitoxin complex from klebsiella pneumoniae 0.8275 2 139
7by2-assembly1.cif.gz_B-2 toxin-antitoxin complex from klebsiella pneumoniae 0.8026 2 139
5ecw-assembly1.cif.gz_A structure of the shigella flexneri vapc mutant d7a 0.8025 1 139
7vwo-assembly3.cif.gz_I ta complex from mycobacterium tuberculosis 0.7951 4 140
5ecw-assembly1.cif.gz_A structure of the shigella flexneri vapc mutant d7a 0.7862 1 139
ID Description Score Start End Superfamily
af_P9WF69_2_135_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8546 4 124 3.40.50.1010
af_O53501_3_137_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8468 5 124 3.40.50.1010
af_P9WF47_4_141_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8329 5 138 3.40.50.1010
af_P9WF55_1_133_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8309 4 124 3.40.50.1010
af_P9WFB3_1_135_3.40.50.1010 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;5'-nuclease 0.8168 3 139 3.40.50.1010
ID Description Score Start End GO Terms
AF-A0A537JL72-F1-model_v4 PIN domain-containing protein 1.001 1 141
AF-A0A1F7PX34-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9996 1 141 GO:0000287
GO:0004540
GO:0090729
AF-A0A521W5R0-F1-model_v4 PIN domain-containing protein 0.9985 1 141
AF-A0A3M1D369-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9957 1 141 GO:0000287
GO:0004540
GO:0090729
AF-A0A2V7XH93-F1-model_v4 Ribonuclease VapC (RNase VapC) (EC 3.1.-.-) (Toxin VapC) 0.9954 1 141 GO:0000287
GO:0004540
GO:0090729

Feature Viewer

pLDDT pTM Quality
96.3 0.88 High
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Predicted Structure (AlphaFold2)

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