F212421

General Info

Members Datasets Scaffolds Average Seq Length
151 89 151 422

Family's Representative Sequence

Representative Sequence 3300046454|Ga0495592_0000006|Ga0495592_0000006_21787_23103
Length 416
Sequence LKALITTATKRTERVFLVGLELKSRTTLDMRESLEELSELAATAGGEVVGNGTQKLESPVAGTFIGSGKADEFAQHCRQQDVDTVIFDDDLSPAQSRNLERVFECKVLDRTSLILDIFAQRARTKEGKLQIELAQLQHLLPRLTRYWGHLSRQKGGIGMRGDGETQLETDRRRVQDRIARIARELQVVRRQRSTQRQGRQRNLWPLASIVGYTNAGKSTLLNALTGSQVFAEDKLFATLDPTTRRLKLPTNQSVLLTDTVGFIRKLPHGLVEAFKATLEEVVQADLLLHVVDASHPQAEGQVRAVNTVLDEIGAAGKPTILVYNKIDRLNGKSNGARTGEGLPALLAELNNQVRPAREFVELSVPHEEAAVIARLHAAGQVVESDYEGEKARFKARIPPHLHEEFAPFIVRDLRTT

Samples

Sample ID Description Type Environment
1 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
2 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
3 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
4 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
5 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
6 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
7 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
8 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
9 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
10 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
11 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
12 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
13 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
14 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
15 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
16 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
17 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
18 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
19 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
20 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
30 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
31 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
32 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
33 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
34 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
35 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
36 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
37 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
38 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
39 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
40 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
41 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
42 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
43 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
44 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
45 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
46 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
47 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
48 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
49 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
50 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
51 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
52 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
53 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
54 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
55 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
56 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
57 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
58 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
59 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
60 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
61 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
62 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
63 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
64 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
65 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
66 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
67 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
68 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
69 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
70 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
71 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
72 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
73 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
74 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
75 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
76 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
77 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
78 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
79 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
80 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
81 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
82 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
83 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
84 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
85 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
86 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
87 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
89 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.32
Rhizosphere 98.68
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070689_100023849 3300005340 Bacteria 4585
2 Ga0070689_100232103 3300005340 Bacteria 1517
3 Ga0070714_100026991 3300005435 Bacteria 4751
4 Ga0068867_100147676 3300005459 Bacteria 1844
5 Ga0070679_100159436 3300005530 Bacteria 2231
6 Ga0070686_100003347 3300005544 Bacteria 8783
7 Ga0070686_100099768 3300005544 Bacteria 1959
8 Ga0068855_100009194 3300005563 Bacteria 11933
9 Ga0068855_100174083 3300005563 Bacteria 2436
10 Ga0068857_100002643 3300005577 Bacteria 14717
11 Ga0068859_100021122 3300005617 Bacteria 6533
12 Ga0068859_100258579 3300005617 Bacteria 1832
13 Ga0068863_100006059 3300005841 Bacteria 11866
14 Ga0068858_100070587 3300005842 Bacteria 3238
15 Ga0075431_100009650 3300006847 Bacteria 9695
16 Ga0075436_100051237 3300006914 Bacteria 2849
17 Ga0097620_100021122 3300006931 Bacteria 6533
18 Ga0097620_100258568 3300006931 Bacteria 1832
19 Ga0105240_10008989 3300009093 Bacteria 14200
20 Ga0105240_10089092 3300009093 Bacteria 3774
21 Ga0105240_10131812 3300009093 Bacteria 2997
22 Ga0105240_10181540 3300009093 Bacteria 2483
23 Ga0111539_10098491 3300009094 Bacteria 3434
24 Ga0105245_10154006 3300009098 Bacteria 2176
25 Ga0105238_10045422 3300009551 Bacteria 4437
26 Ga0157375_10000040 3300013308 Bacteria 164344
27 Ga0163163_10000099 3300014325 Bacteria 91490
28 Ga0163163_10037681 3300014325 Bacteria 4705
29 Ga0163163_10144919 3300014325 Bacteria 2418
30 Ga0163163_10257406 3300014325 Bacteria 1796
31 Ga0207707_10064928 3300025912 Bacteria 3179
32 Ga0207695_10022009 3300025913 Bacteria 7255
33 Ga0207695_10073386 3300025913 Bacteria 3487
34 Ga0207694_10021588 3300025924 Bacteria 4878
35 Ga0207687_10136995 3300025927 Bacteria 1852
36 Ga0207664_10025461 3300025929 Bacteria 4459
37 Ga0207670_10002954 3300025936 Bacteria 8981
38 Ga0207670_10144556 3300025936 Bacteria 1757
39 Ga0207670_10186873 3300025936 Bacteria 1565
40 Ga0207648_10183916 3300026089 Bacteria 1850
41 Ga0207676_10033167 3300026095 Bacteria 3900
42 Ga0207674_10011949 3300026116 Bacteria 9735
43 Ga0265337_1001146 3300028556 Bacteria 13531
44 Ga0265337_1004940 3300028556 Bacteria 5426
45 Ga0265318_10017961 3300028577 Bacteria 2895
46 Ga0265323_10000799 3300028653 Bacteria 16878
47 Ga0265322_10030404 3300028654 Bacteria 1543
48 Ga0265336_10007950 3300028666 Bacteria 3744
49 Ga0265338_10000556 3300028800 Bacteria 65347
50 Ga0265338_10001074 3300028800 Bacteria 45350
51 Ga0265338_10001091 3300028800 Bacteria 45113
52 Ga0265338_10001889 3300028800 Bacteria 32790
53 Ga0265338_10008542 3300028800 Bacteria 12401
54 Ga0265338_10009005 3300028800 Bacteria 12006
55 Ga0265338_10035710 3300028800 Bacteria 4769
56 Ga0265338_10042724 3300028800 Bacteria 4216
57 Ga0265338_10059921 3300028800 Bacteria 3350
58 Ga0265338_10091026 3300028800 Bacteria 2522
59 Ga0265338_10123823 3300028800 Bacteria 2055
60 Ga0265324_10000332 3300029957 Bacteria 34791
61 Ga0265324_10009177 3300029957 Bacteria 3876
62 Ga0265324_10010693 3300029957 Bacteria 3524
63 Ga0265324_10016071 3300029957 Bacteria 2742
64 Ga0265320_10024567 3300031240 Bacteria 3186
65 Ga0265320_10053400 3300031240 Bacteria 1953
66 Ga0265325_10048968 3300031241 Bacteria 2182
67 Ga0265340_10001767 3300031247 Bacteria 12340
68 Ga0265340_10012974 3300031247 Bacteria 4391
69 Ga0265339_10015686 3300031249 Bacteria 4536
70 Ga0265339_10016781 3300031249 Bacteria 4356
71 Ga0265327_10001342 3300031251 Bacteria 31932
72 Ga0265327_10001437 3300031251 Bacteria 30049
73 Ga0265327_10051929 3300031251 Bacteria 2137
74 Ga0265316_10009170 3300031344 Bacteria 9114
75 Ga0265316_10013316 3300031344 Bacteria 7313
76 Ga0265316_10021497 3300031344 Bacteria 5463
77 Ga0265316_10057236 3300031344 Bacteria 3041
78 Ga0265313_10001368 3300031595 Bacteria 22935
79 Ga0265314_10018347 3300031711 Bacteria 5457
80 Ga0316576_10179336 3300031727 Bacteria 1598
81 Ga0316578_10088776 3300031728 Bacteria 1845
82 Ga0373948_0008742 3300034817 Bacteria 1732
83 Ga0373926_0039076 3300035083 Bacteria 1691
84 Ga0373954_0014869 3300035118 Bacteria 3473
85 Ga0373956_0004501 3300035119 Bacteria 5569
86 Ga0316574_0092200 3300035398 Bacteria 1933
87 Ga0373935_0005689 3300035692 Bacteria 7358
88 Ga0373927_0001705 3300035695 Bacteria 16410
89 Ga0373933_0011691 3300035724 Bacteria 4843
90 Ga0373937_0030718 3300036401 Bacteria 4865
91 Ga0373937_0120105 3300036401 Bacteria 2449
92 Ga0316584_0187289 3300036712 Bacteria 1531
93 Ga0373925_0021695 3300037068 Bacteria 4681
94 Ga0373925_0047157 3300037068 Bacteria 3206
95 Ga0451577_0000347 3300042876 Bacteria 86343
96 Ga0451577_0015123 3300042876 Bacteria 7180
97 Ga0451577_0084381 3300042876 Bacteria 2834
98 Ga0453684_0011133 3300044712 Bacteria 15173
99 Ga0453684_0025920 3300044712 Bacteria 8490
100 Ga0453684_0253119 3300044712 Bacteria 2022
101 Ga0453684_0370207 3300044712 Bacteria 1611
102 Ga0451576_0031513 3300045051 Bacteria 5651
103 Ga0451576_0095225 3300045051 Bacteria 3097
104 Ga0451576_0103435 3300045051 Bacteria 2962
105 Ga0451576_0112014 3300045051 Bacteria 2840
106 Ga0451576_0138219 3300045051 Bacteria 2541
107 Ga0451576_0329791 3300045051 Bacteria 1597
108 Ga0495592_0000006 3300046454 Bacteria 192981
109 Ga0495641_0012708 3300046461 Bacteria 4687
110 Ga0495662_0035494 3300046476 Bacteria 2405
111 Ga0495664_0056849 3300046477 Bacteria 2328
112 Ga0495618_0001565 3300046514 Bacteria 15334
113 Ga0495628_0000541 3300046516 Bacteria 34733
114 Ga0495628_0090213 3300046516 Bacteria 2373
115 Ga0495630_0021063 3300046517 Bacteria 4813
116 Ga0495630_0030634 3300046517 Bacteria 4003
117 Ga0495666_0002541 3300046526 Bacteria 9057
118 Ga0495652_0013589 3300046529 Bacteria 7328
119 Ga0495640_0011001 3300046533 Bacteria 6970
120 Ga0495640_0011522 3300046533 Bacteria 6802
121 Ga0495640_0021131 3300046533 Bacteria 4783
122 Ga0495586_0000001 3300046535 Bacteria 231314
123 Ga0495586_0001043 3300046535 Bacteria 15633
124 Ga0495586_0004062 3300046535 Bacteria 7844
125 Ga0495586_0011939 3300046535 Bacteria 4614
126 Ga0495586_0029810 3300046535 Bacteria 2921
127 Ga0495645_0007468 3300046543 Bacteria 7609
128 Ga0495645_0115313 3300046543 Bacteria 1898
129 Ga0495667_0121234 3300046559 Bacteria 1688
130 Ga0495634_0001500 3300046642 Bacteria 20653
131 Ga0495635_0038204 3300046663 Bacteria 3324
132 Ga0495599_0003945 3300046678 Bacteria 8726
133 Ga0495658_0006585 3300046683 Bacteria 5705
134 Ga0495658_0080439 3300046683 Bacteria 1911
135 Ga0495613_0023671 3300046689 Bacteria 4577
136 Ga0495604_0192618 3300047317 Bacteria 1420
137 Ga0495604_0198782 3300047317 Bacteria 1392
138 Ga0495674_0001914 3300047319 Bacteria 20555
139 Ga0495674_0002025 3300047319 Bacteria 19911
140 Ga0495676_0006504 3300047321 Bacteria 10769
141 Ga0495676_0052049 3300047321 Bacteria 3272
142 Ga0495680_0019118 3300047322 Bacteria 5797
143 Ga0495684_0060692 3300047471 Bacteria 2878
144 Ga0495684_0065912 3300047471 Bacteria 2753
145 Ga0496107_0094984 3300048910 Bacteria 2181
146 Ga0496115_0000873 3300048918 Bacteria 21909
147 Ga0501031_0000933 3300049568 Bacteria 17660
148 Ga0501032_0004250 3300049569 Bacteria 10819
149 Ga0501035_0008329 3300049822 Bacteria 9654
150 Ga0501044_0000032 3300049823 Bacteria 169439
151 nmdc:mga06r32_18524_c1 3300050510 Bacteria 6376

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009098 Ga0105245_10154006 Ga0105245_101540061 376
2 3300025927 Ga0207687_10136995 Ga0207687_101369952 376
3 3300046517 Ga0495630_0030634 Ga0495630_0030634_2388_3551 385
4 3300046535 Ga0495586_0000001 Ga0495586_0000001_90253_91416 385
5 3300046683 Ga0495658_0080439 Ga0495658_0080439_610_1773 385
6 3300047319 Ga0495674_0001914 Ga0495674_0001914_4998_6161 385
7 3300047321 Ga0495676_0006504 Ga0495676_0006504_2683_3846 385
8 3300046535 Ga0495586_0029810 Ga0495586_0029810_323_1612 390
9 3300047317 Ga0495604_0192618 Ga0495604_0192618_165_1391 390
10 3300029957 Ga0265324_10009177 Ga0265324_100091772 392
11 3300046559 Ga0495667_0121234 Ga0495667_0121234_58_1347 392
12 3300042876 Ga0451577_0084381 Ga0451577_0084381_622_1923 393
13 3300037068 Ga0373925_0021695 Ga0373925_0021695_340_1623 394
14 3300046454 Ga0495592_0000006 Ga0495592_0000006_21787_23103 394
15 3300046476 Ga0495662_0035494 Ga0495662_0035494_900_2216 394
16 3300046477 Ga0495664_0056849 Ga0495664_0056849_499_1815 394
17 3300046514 Ga0495618_0001565 Ga0495618_0001565_1448_2764 394
18 3300046516 Ga0495628_0000541 Ga0495628_0000541_18654_19970 394
19 3300046517 Ga0495630_0021063 Ga0495630_0021063_720_2036 394
20 3300046526 Ga0495666_0002541 Ga0495666_0002541_2144_3460 394
21 3300046529 Ga0495652_0013589 Ga0495652_0013589_2866_4182 394
22 3300046533 Ga0495640_0011522 Ga0495640_0011522_2129_3445 394
23 3300046535 Ga0495586_0004062 Ga0495586_0004062_4260_5576 394
24 3300046543 Ga0495645_0007468 Ga0495645_0007468_5578_6894 394
25 3300046678 Ga0495599_0003945 Ga0495599_0003945_748_2064 394
26 3300047319 Ga0495674_0002025 Ga0495674_0002025_2171_3487 394
27 3300029957 Ga0265324_10010693 Ga0265324_100106932 396
28 3300005544 Ga0070686_100099768 Ga0070686_1000997681 398
29 3300013308 Ga0157375_10000040 Ga0157375_100000407 398
30 3300031247 Ga0265340_10012974 Ga0265340_100129742 398
31 3300046461 Ga0495641_0012708 Ga0495641_0012708_2258_3472 398
32 3300046533 Ga0495640_0011001 Ga0495640_0011001_4760_5974 398
33 3300046535 Ga0495586_0011939 Ga0495586_0011939_2711_3925 398
34 3300046683 Ga0495658_0006585 Ga0495658_0006585_3139_4353 398
35 3300046689 Ga0495613_0023671 Ga0495613_0023671_2732_3946 398
36 3300045051 Ga0451576_0031513 Ga0451576_0031513_4243_5541 399
37 3300034817 Ga0373948_0008742 Ga0373948_0008742_101_1384 400
38 3300028800 Ga0265338_10035710 Ga0265338_100357102 402
39 3300049568 Ga0501031_0000933 Ga0501031_0000933_13469_14746 403
40 3300049569 Ga0501032_0004250 Ga0501032_0004250_2808_4085 403
41 3300049822 Ga0501035_0008329 Ga0501035_0008329_8134_9411 403
42 3300049823 Ga0501044_0000032 Ga0501044_0000032_2909_4186 403
43 3300009551 Ga0105238_10045422 Ga0105238_100454221 404
44 3300014325 Ga0163163_10037681 Ga0163163_100376814 404
45 3300025924 Ga0207694_10021588 Ga0207694_100215882 404
46 3300026095 Ga0207676_10033167 Ga0207676_100331672 404
47 3300028800 Ga0265338_10009005 Ga0265338_100090052 404
48 3300031249 Ga0265339_10016781 Ga0265339_100167812 404
49 3300035398 Ga0316574_0092200 Ga0316574_0092200_21_1238 404
50 3300036712 Ga0316584_0187289 Ga0316584_0187289_133_1350 404
51 3300044712 Ga0453684_0253119 Ga0453684_0253119_527_1948 404
52 3300005340 Ga0070689_100232103 Ga0070689_1002321031 405
53 3300005842 Ga0068858_100070587 Ga0068858_1000705871 405
54 3300025936 Ga0207670_10186873 Ga0207670_101868732 405
55 3300028556 Ga0265337_1001146 Ga0265337_10011467 405
56 3300028800 Ga0265338_10123823 Ga0265338_101238232 405
57 3300031251 Ga0265327_10051929 Ga0265327_100519292 405
58 3300031344 Ga0265316_10013316 Ga0265316_100133163 405
59 3300005563 Ga0068855_100009194 Ga0068855_1000091947 406
60 3300005617 Ga0068859_100021122 Ga0068859_1000211222 406
61 3300006931 Ga0097620_100021122 Ga0097620_1000211222 406
62 3300031251 Ga0265327_10001342 Ga0265327_100013423 406
63 3300046516 Ga0495628_0090213 Ga0495628_0090213_573_1859 406
64 3300028577 Ga0265318_10017961 Ga0265318_100179612 407
65 3300031344 Ga0265316_10057236 Ga0265316_100572362 407
66 3300005459 Ga0068867_100147676 Ga0068867_1001476762 408
67 3300026089 Ga0207648_10183916 Ga0207648_101839162 408
68 3300028800 Ga0265338_10000556 Ga0265338_1000055616 408
69 3300028800 Ga0265338_10001074 Ga0265338_1000107417 408
70 3300029957 Ga0265324_10000332 Ga0265324_1000033224 408
71 3300031249 Ga0265339_10015686 Ga0265339_100156865 408
72 3300009093 Ga0105240_10008989 Ga0105240_100089899 409
73 3300014325 Ga0163163_10144919 Ga0163163_101449192 409
74 3300014325 Ga0163163_10257406 Ga0163163_102574061 409
75 3300025913 Ga0207695_10022009 Ga0207695_100220095 409
76 3300028556 Ga0265337_1004940 Ga0265337_10049403 409
77 3300031251 Ga0265327_10001437 Ga0265327_1000143715 409
78 3300048910 Ga0496107_0094984 Ga0496107_0094984_57_1373 409
79 3300005340 Ga0070689_100023849 Ga0070689_1000238492 410
80 3300005435 Ga0070714_100026991 Ga0070714_1000269916 410
81 3300005530 Ga0070679_100159436 Ga0070679_1001594363 410
82 3300005544 Ga0070686_100003347 Ga0070686_1000033476 410
83 3300005563 Ga0068855_100174083 Ga0068855_1001740832 410
84 3300005577 Ga0068857_100002643 Ga0068857_10000264310 410
85 3300005617 Ga0068859_100258579 Ga0068859_1002585791 410
86 3300005841 Ga0068863_100006059 Ga0068863_1000060595 410
87 3300006847 Ga0075431_100009650 Ga0075431_1000096504 410
88 3300006914 Ga0075436_100051237 Ga0075436_1000512372 410
89 3300006931 Ga0097620_100258568 Ga0097620_1002585681 410
90 3300009093 Ga0105240_10089092 Ga0105240_100890923 410
91 3300009093 Ga0105240_10131812 Ga0105240_101318122 410
92 3300009093 Ga0105240_10181540 Ga0105240_101815402 410
93 3300009094 Ga0111539_10098491 Ga0111539_100984911 410
94 3300014325 Ga0163163_10000099 Ga0163163_1000009939 410
95 3300025912 Ga0207707_10064928 Ga0207707_100649283 410
96 3300025913 Ga0207695_10073386 Ga0207695_100733865 410
97 3300025929 Ga0207664_10025461 Ga0207664_100254611 410
98 3300025936 Ga0207670_10002954 Ga0207670_100029545 410
99 3300025936 Ga0207670_10144556 Ga0207670_101445562 410
100 3300026116 Ga0207674_10011949 Ga0207674_100119495 410
101 3300028653 Ga0265323_10000799 Ga0265323_100007997 410
102 3300028654 Ga0265322_10030404 Ga0265322_100304041 410
103 3300028666 Ga0265336_10007950 Ga0265336_100079502 410
104 3300028800 Ga0265338_10001091 Ga0265338_1000109124 410
105 3300028800 Ga0265338_10001889 Ga0265338_100018891 410
106 3300028800 Ga0265338_10008542 Ga0265338_100085425 410
107 3300028800 Ga0265338_10042724 Ga0265338_100427242 410
108 3300028800 Ga0265338_10059921 Ga0265338_100599212 410
109 3300028800 Ga0265338_10091026 Ga0265338_100910262 410
110 3300029957 Ga0265324_10016071 Ga0265324_100160712 410
111 3300031240 Ga0265320_10024567 Ga0265320_100245674 410
112 3300031240 Ga0265320_10053400 Ga0265320_100534002 410
113 3300031241 Ga0265325_10048968 Ga0265325_100489682 410
114 3300031247 Ga0265340_10001767 Ga0265340_100017671 410
115 3300031344 Ga0265316_10009170 Ga0265316_100091702 410
116 3300031344 Ga0265316_10021497 Ga0265316_100214976 410
117 3300031595 Ga0265313_10001368 Ga0265313_1000136817 410
118 3300031711 Ga0265314_10018347 Ga0265314_100183476 410
119 3300031727 Ga0316576_10179336 Ga0316576_101793362 410
120 3300031728 Ga0316578_10088776 Ga0316578_100887762 410
121 3300035083 Ga0373926_0039076 Ga0373926_0039076_38_1279 410
122 3300035118 Ga0373954_0014869 Ga0373954_0014869_1295_2554 410
123 3300035119 Ga0373956_0004501 Ga0373956_0004501_4024_5283 410
124 3300035692 Ga0373935_0005689 Ga0373935_0005689_1861_3102 410
125 3300035695 Ga0373927_0001705 Ga0373927_0001705_7267_8508 410
126 3300035724 Ga0373933_0011691 Ga0373933_0011691_1745_3004 410
127 3300036401 Ga0373937_0030718 Ga0373937_0030718_1866_3125 410
128 3300036401 Ga0373937_0120105 Ga0373937_0120105_196_1500 410
129 3300037068 Ga0373925_0047157 Ga0373925_0047157_384_1625 410
130 3300042876 Ga0451577_0000347 Ga0451577_0000347_2438_3736 410
131 3300042876 Ga0451577_0015123 Ga0451577_0015123_5195_6490 410
132 3300044712 Ga0453684_0011133 Ga0453684_0011133_2694_3992 410
133 3300044712 Ga0453684_0025920 Ga0453684_0025920_3926_5227 410
134 3300044712 Ga0453684_0370207 Ga0453684_0370207_208_1506 410
135 3300045051 Ga0451576_0095225 Ga0451576_0095225_1853_3085 410
136 3300045051 Ga0451576_0103435 Ga0451576_0103435_1641_2936 410
137 3300045051 Ga0451576_0112014 Ga0451576_0112014_1345_2640 410
138 3300045051 Ga0451576_0138219 Ga0451576_0138219_187_1485 410
139 3300045051 Ga0451576_0329791 Ga0451576_0329791_53_1351 410
140 3300046533 Ga0495640_0021131 Ga0495640_0021131_1234_2493 410
141 3300046535 Ga0495586_0001043 Ga0495586_0001043_809_2068 410
142 3300046543 Ga0495645_0115313 Ga0495645_0115313_476_1780 410
143 3300046642 Ga0495634_0001500 Ga0495634_0001500_3319_4578 410
144 3300046663 Ga0495635_0038204 Ga0495635_0038204_130_1389 410
145 3300047317 Ga0495604_0198782 Ga0495604_0198782_65_1363 410
146 3300047321 Ga0495676_0052049 Ga0495676_0052049_1921_3162 410
147 3300047322 Ga0495680_0019118 Ga0495680_0019118_2554_3813 410
148 3300047471 Ga0495684_0060692 Ga0495684_0060692_1545_2846 410
149 3300047471 Ga0495684_0065912 Ga0495684_0065912_469_1767 410
150 3300048918 Ga0496115_0000873 Ga0496115_0000873_1311_2609 410
151 3300050510 nmdc:mga06r32_18524_c1 nmdc:mga06r32_18524_c1_2322_3629 410

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13167

GTP-bdg_N

GTP-binding GTPase N-terminal

31

119

0.99

PF16360

GTP-bdg_M

GTP-binding GTPase Middle Region

121

199

0.99

PF01926

MMR_HSR1

50S ribosome-binding GTPase

207

325

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3rkl-assembly1.cif.gz_A the crystal structure of a81 from sulfolobus turreted icosahedral virus 0.8947 108 170
7odt-assembly1.cif.gz_t state c of the human mitoribosomal large subunit assembly intermediate 0.8504 187 346
7o9k-assembly1.cif.gz_G human mitochondrial ribosome large subunit assembly intermediate with mterf4-nsun4, mrm2, mtg1, the malsu module, gtpbp5 and mtef-tu 0.8351 184 345
7jj8-assembly4.cif.gz_D crystal structure of the zn(ii)-bound znua-like domain of streptococcus pneumoniae adca 0.8183 45 88
7rro-assembly1.cif.gz_F4 structure of the 48-nm repeat doublet microtubule from bovine tracheal cilia 0.781 89 174
ID Description Score Start End Superfamily
af_O33230_82_179_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9604 3 99 3.40.50.11060
af_Q58526_7_100_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9451 13 99 3.40.50.11060
af_O33230_82_179_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9417 3 99 3.40.50.11060
af_Q2R1U5_327_493_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9369 185 347 3.40.50.300
af_O33230_270_440_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9309 185 350 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A257SFL2-F1-model_v4 GTPase HflX N-terminal domain-containing protein 0.981 11 100 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A519ZRN3-F1-model_v4 GTPase HflX 0.977 12 118 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A2V6KU26-F1-model_v4 GTPase HflX 0.9753 3 100 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A2V8KYH6-F1-model_v4 GTPase HflX 0.9629 13 103 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A1L5KXR6-F1-model_v4 GTP_HflX: GTP-binding protein 0.96 3 99 GO:0005525
GO:0005737
GO:0043022
GO:0046872

Feature Viewer

pLDDT pTM Quality
77.75 0.67 Medium
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Predicted Structure (AlphaFold2)

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