F211673
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 151 | 120 | 151 | 434 |
Family's Representative Sequence
| Representative Sequence | 3300021361|Ga0213872_10040520|Ga0213872_100405201 |
| Length | 512 |
| Sequence | MARQGSFPGPGPAECDFRVHGRFEFQRARTRRSASLPNDLVAPSGPVGPSFTLALWPQRRNQTPYLHLQLLVGCISISSGVMEAFIESLGECQFLSPLRHRHIGSEKFRTDEHRVIHDDSMEGVRDSFERGLSPLDFEMAGPREKIYFDPAKTSAAIVTCGGLCPGLNDIIRGVVMELYHRYGVTRIFGLRYGYEGLVPRIGHVPLALRPESVSTIHTFGGTILGSSRGPQDAGEMVDHLEELGVDLLFVVGGDGTLQGGARINTEIRRRGLKKSVIGIPKTIDNDIMYLDKSFGFDTAFAEAVKAVSCAHVEAVGAMNGIGLVKLMGRHSGFIACYAALAGQHVNYCLIPEVPFNLDGPSGLLETLRYRLAKRKHAVIVVAEGAGQNLMDGDLFETDASGNRRLGNIGEFLKDKITEFFKSRRIEVNLKYIDPSYTIRSVPASAQDNVYCLRLAQNAVHAGMAGKTNMLIGQWHGTFVHIPFGLVTKGRRRVDPAGDLWQAVLECTGQPKF |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 2 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 3 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 4 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 6 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 15 | 3300005438 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 18 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 22 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 23 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 24 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 26 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 27 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 29 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Metagenome | Rhizosphere |
| 31 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 32 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 34 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 35 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 36 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 37 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 38 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 39 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 40 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 41 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 42 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 43 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 44 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 51 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 58 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 59 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 60 | 3300021377 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 | Metagenome | Unclassified |
| 61 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 62 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 89 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 90 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 91 | 3300031727 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 | Metagenome | Rhizosphere |
| 92 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 93 | 3300031733 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 | Metagenome | Rhizosphere |
| 94 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 95 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 96 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 97 | 3300032137 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC | Metagenome | Rhizosphere |
| 98 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 99 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 100 | 3300037588 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA | Metagenome | Rhizosphere |
| 101 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 102 | 3300039093 | Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 | Metagenome | Unclassified |
| 103 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 104 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 105 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 106 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 107 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 108 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 109 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300046499 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere | Metagenome | Rhizosphere |
| 111 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 113 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 114 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 115 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 116 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049743 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 119 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 1.99 |
| Nodule | 0 |
| Rhizoplane | 2.65 |
| Rhizosphere | 88.74 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 6.62 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | rootL2_10016193 | 3300003322 | Bacteria | 9266 |
| 2 | Ga0055530_10015903 | 3300003791 | Bacteria | 2429 |
| 3 | Ga0070658_10004736 | 3300005327 | Bacteria | 11067 |
| 4 | Ga0070676_10001389 | 3300005328 | Bacteria | 12220 |
| 5 | Ga0070680_100046897 | 3300005336 | Bacteria | 3516 |
| 6 | Ga0070660_100023589 | 3300005339 | Bacteria | 4558 |
| 7 | Ga0070691_10002616 | 3300005341 | Bacteria | 8038 |
| 8 | Ga0070668_100047168 | 3300005347 | Bacteria | 3311 |
| 9 | Ga0070668_100148961 | 3300005347 | Bacteria | 1891 |
| 10 | Ga0070675_100003724 | 3300005354 | Bacteria | 11589 |
| 11 | Ga0070671_100037081 | 3300005355 | Bacteria | 4042 |
| 12 | Ga0070673_100000775 | 3300005364 | Bacteria | 17745 |
| 13 | Ga0070659_100037705 | 3300005366 | Bacteria | 3769 |
| 14 | Ga0070667_100098750 | 3300005367 | Bacteria | 2519 |
| 15 | Ga0070709_10005203 | 3300005434 | Bacteria | 7036 |
| 16 | Ga0070709_10049717 | 3300005434 | Bacteria | 2623 |
| 17 | Ga0070701_10001356 | 3300005438 | Bacteria | 9029 |
| 18 | Ga0070705_100002067 | 3300005440 | Bacteria | 10245 |
| 19 | Ga0070694_100003935 | 3300005444 | Bacteria | 8887 |
| 20 | Ga0070708_100120355 | 3300005445 | Bacteria | 2422 |
| 21 | Ga0070663_100104168 | 3300005455 | Bacteria | 2122 |
| 22 | Ga0070678_100038439 | 3300005456 | Bacteria | 3369 |
| 23 | Ga0070678_100125127 | 3300005456 | Bacteria | 2034 |
| 24 | Ga0070706_100164054 | 3300005467 | Bacteria | 2075 |
| 25 | Ga0070707_100027053 | 3300005468 | Bacteria | 5453 |
| 26 | Ga0070698_100005632 | 3300005471 | Bacteria | 13706 |
| 27 | Ga0070698_100070913 | 3300005471 | Unclassified | 3496 |
| 28 | Ga0070699_100058458 | 3300005518 | Unclassified | 3340 |
| 29 | Ga0070699_100112292 | 3300005518 | Bacteria | 2393 |
| 30 | Ga0070697_100003846 | 3300005536 | Bacteria | 11528 |
| 31 | Ga0070697_100136273 | 3300005536 | Unclassified | 2062 |
| 32 | Ga0068853_100000002 | 3300005539 | Bacteria | 485323 |
| 33 | Ga0068853_100329757 | 3300005539 | Bacteria | 1416 |
| 34 | Ga0070672_100082464 | 3300005543 | Bacteria | 2580 |
| 35 | Ga0070695_100002070 | 3300005545 | Bacteria | 11487 |
| 36 | Ga0070696_100003467 | 3300005546 | Bacteria | 10480 |
| 37 | Ga0070704_100000542 | 3300005549 | Bacteria | 18073 |
| 38 | Ga0068855_100013265 | 3300005563 | Bacteria | 9936 |
| 39 | Ga0070664_100091208 | 3300005564 | Bacteria | 2638 |
| 40 | Ga0068854_100073881 | 3300005578 | Bacteria | 2500 |
| 41 | Ga0068859_100074421 | 3300005617 | Bacteria | 3435 |
| 42 | Ga0068861_100000168 | 3300005719 | Bacteria | 34678 |
| 43 | Ga0068863_100004815 | 3300005841 | Bacteria | 13294 |
| 44 | Ga0068863_100059749 | 3300005841 | Bacteria | 3607 |
| 45 | Ga0068858_100014322 | 3300005842 | Bacteria | 7480 |
| 46 | Ga0068858_100056924 | 3300005842 | Bacteria | 3613 |
| 47 | Ga0068860_100000206 | 3300005843 | Bacteria | 93792 |
| 48 | Ga0068860_100034456 | 3300005843 | Bacteria | 4856 |
| 49 | Ga0068862_100257946 | 3300005844 | Bacteria | 1590 |
| 50 | Ga0070717_10010257 | 3300006028 | Bacteria | 7060 |
| 51 | Ga0070717_10158272 | 3300006028 | Unclassified | 1964 |
| 52 | Ga0070717_10220192 | 3300006028 | Bacteria | 1668 |
| 53 | Ga0070716_100035734 | 3300006173 | Bacteria | 2733 |
| 54 | Ga0070712_100073915 | 3300006175 | Bacteria | 2446 |
| 55 | Ga0075430_100077952 | 3300006846 | Bacteria | 2778 |
| 56 | Ga0097620_100074416 | 3300006931 | Bacteria | 3435 |
| 57 | Ga0105240_10000550 | 3300009093 | Bacteria | 69293 |
| 58 | Ga0105247_10001909 | 3300009101 | Bacteria | 14542 |
| 59 | Ga0114129_10067156 | 3300009147 | Bacteria | 5001 |
| 60 | Ga0114129_10440890 | 3300009147 | Bacteria | 1710 |
| 61 | Ga0105243_10031810 | 3300009148 | Bacteria | 4070 |
| 62 | Ga0105243_10087162 | 3300009148 | Bacteria | 2562 |
| 63 | Ga0105248_10006962 | 3300009177 | Bacteria | 12388 |
| 64 | Ga0105237_10007396 | 3300009545 | Bacteria | 12027 |
| 65 | Ga0105238_10002067 | 3300009551 | Bacteria | 20266 |
| 66 | Ga0105249_10071186 | 3300009553 | Bacteria | 3212 |
| 67 | Ga0157374_10000059 | 3300013296 | Bacteria | 116409 |
| 68 | Ga0157378_10264347 | 3300013297 | Bacteria | 1652 |
| 69 | Ga0163162_10013472 | 3300013306 | Bacteria | 7982 |
| 70 | Ga0163162_10047303 | 3300013306 | Bacteria | 4311 |
| 71 | Ga0157375_10000837 | 3300013308 | Bacteria | 26889 |
| 72 | Ga0157379_10000708 | 3300014968 | Bacteria | 27005 |
| 73 | Ga0157376_10000561 | 3300014969 | Bacteria | 23988 |
| 74 | Ga0213872_10040520 | 3300021361 | Bacteria | 2126 |
| 75 | Ga0213874_10013785 | 3300021377 | Bacteria | 2103 |
| 76 | Ga0213876_10000248 | 3300021384 | Bacteria | 51560 |
| 77 | Ga0213876_10007837 | 3300021384 | Bacteria | 5794 |
| 78 | Ga0209050_1000505 | 3300025298 | Bacteria | 66311 |
| 79 | Ga0207692_10117449 | 3300025898 | Bacteria | 1484 |
| 80 | Ga0207710_10000092 | 3300025900 | Bacteria | 121199 |
| 81 | Ga0207699_10014030 | 3300025906 | Unclassified | 4119 |
| 82 | Ga0207645_10000680 | 3300025907 | Bacteria | 28180 |
| 83 | Ga0207705_10023793 | 3300025909 | Bacteria | 4370 |
| 84 | Ga0207695_10000644 | 3300025913 | Bacteria | 69302 |
| 85 | Ga0207693_10000419 | 3300025915 | Bacteria | 38578 |
| 86 | Ga0207663_10013165 | 3300025916 | Bacteria | 4490 |
| 87 | Ga0207657_10010033 | 3300025919 | Bacteria | 9474 |
| 88 | Ga0207649_10034626 | 3300025920 | Bacteria | 3028 |
| 89 | Ga0207659_10039770 | 3300025926 | Bacteria | 3283 |
| 90 | Ga0207644_10036073 | 3300025931 | Bacteria | 3469 |
| 91 | Ga0207709_10037920 | 3300025935 | Bacteria | 2866 |
| 92 | Ga0207665_10007515 | 3300025939 | Bacteria | 7204 |
| 93 | Ga0207665_10123513 | 3300025939 | Bacteria | 1831 |
| 94 | Ga0207691_10004765 | 3300025940 | Bacteria | 13120 |
| 95 | Ga0207711_10004601 | 3300025941 | Bacteria | 11730 |
| 96 | Ga0207679_10039641 | 3300025945 | Bacteria | 3366 |
| 97 | Ga0207667_10008712 | 3300025949 | Bacteria | 12024 |
| 98 | Ga0207640_10060313 | 3300025981 | Bacteria | 2507 |
| 99 | Ga0207703_10028168 | 3300026035 | Bacteria | 4426 |
| 100 | Ga0207703_10030788 | 3300026035 | Bacteria | 4240 |
| 101 | Ga0207639_10000009 | 3300026041 | Bacteria | 432727 |
| 102 | Ga0207708_10005772 | 3300026075 | Bacteria | 9148 |
| 103 | Ga0207675_100001915 | 3300026118 | Bacteria | 20759 |
| 104 | Ga0207683_10016528 | 3300026121 | Bacteria | 6282 |
| 105 | Ga0268264_10000341 | 3300028381 | Bacteria | 71848 |
| 106 | Ga0268264_10016615 | 3300028381 | Bacteria | 6026 |
| 107 | Ga0265327_10036348 | 3300031251 | Bacteria | 2708 |
| 108 | Ga0316575_10001047 | 3300031665 | Bacteria | 8589 |
| 109 | Ga0316575_10015067 | 3300031665 | Bacteria | 2912 |
| 110 | Ga0316579_10006529 | 3300031691 | Bacteria | 4762 |
| 111 | Ga0316579_10022848 | 3300031691 | Unclassified | 2802 |
| 112 | Ga0316576_10003405 | 3300031727 | Bacteria | 9305 |
| 113 | Ga0316576_10018595 | 3300031727 | Bacteria | 4747 |
| 114 | Ga0316576_10072086 | 3300031727 | Bacteria | 2549 |
| 115 | Ga0316578_10002449 | 3300031728 | Bacteria | 8149 |
| 116 | Ga0316577_10014597 | 3300031733 | Bacteria | 4312 |
| 117 | Ga0307410_10000560 | 3300031852 | Bacteria | 15254 |
| 118 | Ga0307409_100000030 | 3300031995 | Bacteria | 49142 |
| 119 | Ga0316583_10011173 | 3300032133 | Unclassified | 3233 |
| 120 | Ga0316585_10005931 | 3300032137 | Bacteria | 3469 |
| 121 | Ga0316582_0005908 | 3300036647 | Bacteria | 6367 |
| 122 | Ga0316582_0113664 | 3300036647 | Bacteria | 1805 |
| 123 | Ga0316584_0065693 | 3300036712 | Unclassified | 2718 |
| 124 | Ga0316581_0035673 | 3300037588 | Bacteria | 1508 |
| 125 | Ga0436364_1343920 | 3300037853 | Bacteria | 1664 |
| 126 | Ga0400489_90122 | 3300039093 | Bacteria | 1960 |
| 127 | Ga0436365_1279257 | 3300039437 | Bacteria | 36311 |
| 128 | Ga0436365_1371767 | 3300039437 | Bacteria | 5734 |
| 129 | Ga0436365_1702714 | 3300039437 | Bacteria | 17164 |
| 130 | Ga0436360_0109079 | 3300039438 | Bacteria | 6475 |
| 131 | Ga0436360_0806345 | 3300039438 | Bacteria | 4431 |
| 132 | Ga0436360_1095117 | 3300039438 | Bacteria | 6571 |
| 133 | Ga0436361_0280695 | 3300039447 | Bacteria | 2828 |
| 134 | Ga0436361_0797992 | 3300039447 | Bacteria | 19448 |
| 135 | Ga0436363_0015210 | 3300039450 | Bacteria | 9657 |
| 136 | Ga0451577_0000358 | 3300042876 | Bacteria | 84990 |
| 137 | Ga0451577_0062629 | 3300042876 | Bacteria | 3318 |
| 138 | Ga0453684_0070369 | 3300044712 | Bacteria | 4431 |
| 139 | Ga0453684_0191616 | 3300044712 | Bacteria | 2391 |
| 140 | Ga0495653_0035321 | 3300046463 | Bacteria | 3946 |
| 141 | Ga0495594_0033513 | 3300046499 | Bacteria | 2793 |
| 142 | Ga0495643_0000265 | 3300046522 | Bacteria | 76016 |
| 143 | Ga0496108_0188152 | 3300048911 | Bacteria | 1789 |
| 144 | Ga0496109_0261927 | 3300048912 | Bacteria | 1629 |
| 145 | Ga0496110_0080547 | 3300048913 | Bacteria | 2902 |
| 146 | Ga0496112_0036177 | 3300048915 | Bacteria | 4815 |
| 147 | Ga0501034_0000407 | 3300049571 | Bacteria | 72634 |
| 148 | Ga0501081_0076269 | 3300049743 | Unclassified | 2341 |
| 149 | nmdc:mga0k408_37231_c2 | 3300050493 | Bacteria | 1289 |
| 150 | nmdc:mga05p37_132142_c1 | 3300050507 | Bacteria | 1710 |
| 151 | nmdc:mga0qj67_64916_c1 | 3300050509 | Bacteria | 2905 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005617 | Ga0068859_100074421 | Ga0068859_1000744212 | 336 |
| 2 | 3300006931 | Ga0097620_100074416 | Ga0097620_1000744162 | 336 |
| 3 | 3300009148 | Ga0105243_10087162 | Ga0105243_100871623 | 344 |
| 4 | 3300048912 | Ga0496109_0261927 | Ga0496109_0261927_11_1135 | 373 |
| 5 | 3300050493 | nmdc:mga0k408_37231_c2 | nmdc:mga0k408_37231_c2_144_1268 | 373 |
| 6 | 3300039093 | Ga0400489_90122 | Ga0400489_90122_748_1920 | 388 |
| 7 | 3300005456 | Ga0070678_100125127 | Ga0070678_1001251271 | 402 |
| 8 | 3300009147 | Ga0114129_10067156 | Ga0114129_100671563 | 402 |
| 9 | 3300013306 | Ga0163162_10047303 | Ga0163162_100473033 | 402 |
| 10 | 3300044712 | Ga0453684_0191616 | Ga0453684_0191616_831_2057 | 406 |
| 11 | 3300005842 | Ga0068858_100014322 | Ga0068858_1000143225 | 407 |
| 12 | 3300026035 | Ga0207703_10028168 | Ga0207703_100281683 | 407 |
| 13 | 3300049743 | Ga0501081_0076269 | Ga0501081_0076269_1007_2281 | 418 |
| 14 | 3300009551 | Ga0105238_10002067 | Ga0105238_1000206711 | 420 |
| 15 | 3300048915 | Ga0496112_0036177 | Ga0496112_0036177_3178_4464 | 421 |
| 16 | 3300005336 | Ga0070680_100046897 | Ga0070680_1000468972 | 422 |
| 17 | 3300005339 | Ga0070660_100023589 | Ga0070660_1000235893 | 422 |
| 18 | 3300005354 | Ga0070675_100003724 | Ga0070675_1000037244 | 422 |
| 19 | 3300005355 | Ga0070671_100037081 | Ga0070671_1000370812 | 422 |
| 20 | 3300005364 | Ga0070673_100000775 | Ga0070673_10000077516 | 422 |
| 21 | 3300005366 | Ga0070659_100037705 | Ga0070659_1000377053 | 422 |
| 22 | 3300005367 | Ga0070667_100098750 | Ga0070667_1000987501 | 422 |
| 23 | 3300005455 | Ga0070663_100104168 | Ga0070663_1001041682 | 422 |
| 24 | 3300005543 | Ga0070672_100082464 | Ga0070672_1000824642 | 422 |
| 25 | 3300005564 | Ga0070664_100091208 | Ga0070664_1000912083 | 422 |
| 26 | 3300005841 | Ga0068863_100004815 | Ga0068863_10000481511 | 422 |
| 27 | 3300005841 | Ga0068863_100059749 | Ga0068863_1000597492 | 422 |
| 28 | 3300005842 | Ga0068858_100056924 | Ga0068858_1000569243 | 422 |
| 29 | 3300005843 | Ga0068860_100034456 | Ga0068860_1000344564 | 422 |
| 30 | 3300009177 | Ga0105248_10006962 | Ga0105248_1000696211 | 422 |
| 31 | 3300013297 | Ga0157378_10264347 | Ga0157378_102643471 | 422 |
| 32 | 3300013306 | Ga0163162_10013472 | Ga0163162_100134723 | 422 |
| 33 | 3300013308 | Ga0157375_10000837 | Ga0157375_100008373 | 422 |
| 34 | 3300014968 | Ga0157379_10000708 | Ga0157379_1000070824 | 422 |
| 35 | 3300025919 | Ga0207657_10010033 | Ga0207657_100100333 | 422 |
| 36 | 3300025920 | Ga0207649_10034626 | Ga0207649_100346264 | 422 |
| 37 | 3300025926 | Ga0207659_10039770 | Ga0207659_100397703 | 422 |
| 38 | 3300025931 | Ga0207644_10036073 | Ga0207644_100360732 | 422 |
| 39 | 3300025940 | Ga0207691_10004765 | Ga0207691_100047652 | 422 |
| 40 | 3300025941 | Ga0207711_10004601 | Ga0207711_100046012 | 422 |
| 41 | 3300025945 | Ga0207679_10039641 | Ga0207679_100396412 | 422 |
| 42 | 3300026035 | Ga0207703_10030788 | Ga0207703_100307883 | 422 |
| 43 | 3300028381 | Ga0268264_10016615 | Ga0268264_100166152 | 422 |
| 44 | 3300031665 | Ga0316575_10001047 | Ga0316575_100010474 | 422 |
| 45 | 3300031665 | Ga0316575_10015067 | Ga0316575_100150672 | 422 |
| 46 | 3300031691 | Ga0316579_10006529 | Ga0316579_100065292 | 422 |
| 47 | 3300031691 | Ga0316579_10022848 | Ga0316579_100228482 | 422 |
| 48 | 3300031727 | Ga0316576_10072086 | Ga0316576_100720862 | 422 |
| 49 | 3300031728 | Ga0316578_10002449 | Ga0316578_100024494 | 422 |
| 50 | 3300031733 | Ga0316577_10014597 | Ga0316577_100145972 | 422 |
| 51 | 3300032133 | Ga0316583_10011173 | Ga0316583_100111731 | 422 |
| 52 | 3300032137 | Ga0316585_10005931 | Ga0316585_100059313 | 422 |
| 53 | 3300036647 | Ga0316582_0005908 | Ga0316582_0005908_1572_2858 | 422 |
| 54 | 3300036712 | Ga0316584_0065693 | Ga0316584_0065693_112_1641 | 422 |
| 55 | 3300037588 | Ga0316581_0035673 | Ga0316581_0035673_127_1416 | 422 |
| 56 | 3300044712 | Ga0453684_0070369 | Ga0453684_0070369_3074_4363 | 422 |
| 57 | 3300048913 | Ga0496110_0080547 | Ga0496110_0080547_966_2270 | 422 |
| 58 | 3300005328 | Ga0070676_10001389 | Ga0070676_100013893 | 423 |
| 59 | 3300005341 | Ga0070691_10002616 | Ga0070691_100026164 | 423 |
| 60 | 3300005438 | Ga0070701_10001356 | Ga0070701_100013567 | 423 |
| 61 | 3300005440 | Ga0070705_100002067 | Ga0070705_1000020673 | 423 |
| 62 | 3300005444 | Ga0070694_100003935 | Ga0070694_1000039354 | 423 |
| 63 | 3300005545 | Ga0070695_100002070 | Ga0070695_1000020703 | 423 |
| 64 | 3300005546 | Ga0070696_100003467 | Ga0070696_1000034676 | 423 |
| 65 | 3300005549 | Ga0070704_100000542 | Ga0070704_1000005427 | 423 |
| 66 | 3300005578 | Ga0068854_100073881 | Ga0068854_1000738812 | 423 |
| 67 | 3300005719 | Ga0068861_100000168 | Ga0068861_1000001683 | 423 |
| 68 | 3300009148 | Ga0105243_10031810 | Ga0105243_100318103 | 423 |
| 69 | 3300025907 | Ga0207645_10000680 | Ga0207645_100006808 | 423 |
| 70 | 3300025935 | Ga0207709_10037920 | Ga0207709_100379202 | 423 |
| 71 | 3300025981 | Ga0207640_10060313 | Ga0207640_100603132 | 423 |
| 72 | 3300026075 | Ga0207708_10005772 | Ga0207708_100057726 | 423 |
| 73 | 3300026118 | Ga0207675_100001915 | Ga0207675_1000019156 | 423 |
| 74 | 3300036647 | Ga0316582_0113664 | Ga0316582_0113664_124_1425 | 423 |
| 75 | 3300048911 | Ga0496108_0188152 | Ga0496108_0188152_279_1580 | 423 |
| 76 | 3300005347 | Ga0070668_100047168 | Ga0070668_1000471682 | 424 |
| 77 | 3300006173 | Ga0070716_100035734 | Ga0070716_1000357342 | 424 |
| 78 | 3300006846 | Ga0075430_100077952 | Ga0075430_1000779523 | 424 |
| 79 | 3300009553 | Ga0105249_10071186 | Ga0105249_100711862 | 424 |
| 80 | 3300025915 | Ga0207693_10000419 | Ga0207693_100004192 | 424 |
| 81 | 3300025916 | Ga0207663_10013165 | Ga0207663_100131653 | 424 |
| 82 | 3300025939 | Ga0207665_10007515 | Ga0207665_100075156 | 424 |
| 83 | 3300026121 | Ga0207683_10016528 | Ga0207683_100165286 | 424 |
| 84 | 3300050509 | nmdc:mga0qj67_64916_c1 | nmdc:mga0qj67_64916_c1_1576_2883 | 424 |
| 85 | 3300031727 | Ga0316576_10003405 | Ga0316576_100034055 | 426 |
| 86 | 3300003791 | Ga0055530_10015903 | Ga0055530_100159033 | 427 |
| 87 | 3300005844 | Ga0068862_100257946 | Ga0068862_1002579461 | 427 |
| 88 | 3300025298 | Ga0209050_1000505 | Ga0209050_100050539 | 427 |
| 89 | 3300031251 | Ga0265327_10036348 | Ga0265327_100363482 | 427 |
| 90 | 3300042876 | Ga0451577_0000358 | Ga0451577_0000358_6164_7468 | 427 |
| 91 | 3300021361 | Ga0213872_10040520 | Ga0213872_100405201 | 428 |
| 92 | 3300046499 | Ga0495594_0033513 | Ga0495594_0033513_868_2196 | 428 |
| 93 | 3300046522 | Ga0495643_0000265 | Ga0495643_0000265_49137_50426 | 428 |
| 94 | 3300005327 | Ga0070658_10004736 | Ga0070658_100047364 | 429 |
| 95 | 3300005434 | Ga0070709_10005203 | Ga0070709_100052033 | 429 |
| 96 | 3300005467 | Ga0070706_100164054 | Ga0070706_1001640542 | 429 |
| 97 | 3300005471 | Ga0070698_100005632 | Ga0070698_1000056325 | 429 |
| 98 | 3300005518 | Ga0070699_100112292 | Ga0070699_1001122922 | 429 |
| 99 | 3300005536 | Ga0070697_100003846 | Ga0070697_1000038464 | 429 |
| 100 | 3300005539 | Ga0068853_100329757 | Ga0068853_1003297571 | 429 |
| 101 | 3300006028 | Ga0070717_10010257 | Ga0070717_100102576 | 429 |
| 102 | 3300009545 | Ga0105237_10007396 | Ga0105237_1000739616 | 429 |
| 103 | 3300021384 | Ga0213876_10007837 | Ga0213876_100078373 | 429 |
| 104 | 3300025906 | Ga0207699_10014030 | Ga0207699_100140301 | 429 |
| 105 | 3300025909 | Ga0207705_10023793 | Ga0207705_100237931 | 429 |
| 106 | 3300039437 | Ga0436365_1702714 | Ga0436365_1702714_2035_3327 | 429 |
| 107 | 3300039438 | Ga0436360_0806345 | Ga0436360_0806345_1668_2960 | 429 |
| 108 | 3300039438 | Ga0436360_1095117 | Ga0436360_1095117_3250_4542 | 429 |
| 109 | 3300039447 | Ga0436361_0280695 | Ga0436361_0280695_700_1992 | 429 |
| 110 | 3300046463 | Ga0495653_0035321 | Ga0495653_0035321_99_1472 | 429 |
| 111 | 3300005347 | Ga0070668_100148961 | Ga0070668_1001489612 | 430 |
| 112 | 3300005434 | Ga0070709_10049717 | Ga0070709_100497172 | 430 |
| 113 | 3300005445 | Ga0070708_100120355 | Ga0070708_1001203552 | 430 |
| 114 | 3300005456 | Ga0070678_100038439 | Ga0070678_1000384392 | 430 |
| 115 | 3300005468 | Ga0070707_100027053 | Ga0070707_1000270535 | 430 |
| 116 | 3300005471 | Ga0070698_100070913 | Ga0070698_1000709133 | 430 |
| 117 | 3300005518 | Ga0070699_100058458 | Ga0070699_1000584583 | 430 |
| 118 | 3300005536 | Ga0070697_100136273 | Ga0070697_1001362732 | 430 |
| 119 | 3300005539 | Ga0068853_100000002 | Ga0068853_100000002128 | 430 |
| 120 | 3300005843 | Ga0068860_100000206 | Ga0068860_10000020669 | 430 |
| 121 | 3300006028 | Ga0070717_10158272 | Ga0070717_101582722 | 430 |
| 122 | 3300006028 | Ga0070717_10220192 | Ga0070717_102201922 | 430 |
| 123 | 3300006175 | Ga0070712_100073915 | Ga0070712_1000739152 | 430 |
| 124 | 3300009101 | Ga0105247_10001909 | Ga0105247_100019092 | 430 |
| 125 | 3300009147 | Ga0114129_10440890 | Ga0114129_104408902 | 430 |
| 126 | 3300021384 | Ga0213876_10000248 | Ga0213876_1000024811 | 430 |
| 127 | 3300025898 | Ga0207692_10117449 | Ga0207692_101174491 | 430 |
| 128 | 3300025900 | Ga0207710_10000092 | Ga0207710_1000009236 | 430 |
| 129 | 3300025939 | Ga0207665_10123513 | Ga0207665_101235131 | 430 |
| 130 | 3300026041 | Ga0207639_10000009 | Ga0207639_1000000982 | 430 |
| 131 | 3300028381 | Ga0268264_10000341 | Ga0268264_1000034166 | 430 |
| 132 | 3300031727 | Ga0316576_10018595 | Ga0316576_100185953 | 430 |
| 133 | 3300031852 | Ga0307410_10000560 | Ga0307410_100005606 | 430 |
| 134 | 3300031995 | Ga0307409_100000030 | Ga0307409_10000003011 | 430 |
| 135 | 3300037853 | Ga0436364_1343920 | Ga0436364_1343920_226_1533 | 430 |
| 136 | 3300039437 | Ga0436365_1279257 | Ga0436365_1279257_25365_26672 | 430 |
| 137 | 3300039437 | Ga0436365_1371767 | Ga0436365_1371767_4259_5566 | 430 |
| 138 | 3300039438 | Ga0436360_0109079 | Ga0436360_0109079_377_1678 | 430 |
| 139 | 3300039447 | Ga0436361_0797992 | Ga0436361_0797992_11440_12741 | 430 |
| 140 | 3300042876 | Ga0451577_0062629 | Ga0451577_0062629_1293_2594 | 430 |
| 141 | 3300049571 | Ga0501034_0000407 | Ga0501034_0000407_23550_24908 | 430 |
| 142 | 3300050507 | nmdc:mga05p37_132142_c1 | nmdc:mga05p37_132142_c1_371_1690 | 430 |
| 143 | 3300021377 | Ga0213874_10013785 | Ga0213874_100137852 | 431 |
| 144 | 3300039450 | Ga0436363_0015210 | Ga0436363_0015210_321_1619 | 431 |
| 145 | 3300003322 | rootL2_10016193 | rootL2_100161934 | 432 |
| 146 | 3300005563 | Ga0068855_100013265 | Ga0068855_1000132658 | 432 |
| 147 | 3300009093 | Ga0105240_10000550 | Ga0105240_100005504 | 432 |
| 148 | 3300013296 | Ga0157374_10000059 | Ga0157374_1000005998 | 432 |
| 149 | 3300014969 | Ga0157376_10000561 | Ga0157376_1000056120 | 432 |
| 150 | 3300025913 | Ga0207695_10000644 | Ga0207695_100006444 | 432 |
| 151 | 3300025949 | Ga0207667_10008712 | Ga0207667_100087128 | 432 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3f5m-assembly1.cif.gz_D | crystal structure of atp-bound phosphofructokinase from trypanosoma brucei | 0.9559 | 2 | 422 |
| 2hig-assembly1.cif.gz_A-2 | crystal structure of phosphofructokinase apoenzyme from trypanosoma brucei. | 0.9545 | 2 | 422 |
| 3f5m-assembly1.cif.gz_B | crystal structure of atp-bound phosphofructokinase from trypanosoma brucei | 0.9515 | 2 | 422 |
| 3f5m-assembly1.cif.gz_A | crystal structure of atp-bound phosphofructokinase from trypanosoma brucei | 0.9444 | 2 | 422 |
| 6qu5-assembly1.cif.gz_B | crystal structure of phosphofructokinase from trypanosoma brucei in complex with an allosteric inhibitor ctcb12 | 0.9406 | 2 | 422 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q4E657_92_285_3.40.50.450 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9866 | 67 | 259 | 3.40.50.450 |
| af_A0A1D6EPV9_351_509_3.40.50.460 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Phosphofructokinase domain | 0.9847 | 213 | 370 | 3.40.50.460 |
| af_A0A1D6EPV9_166_305_3.40.50.450 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9817 | 66 | 184 | 3.40.50.450 |
| 3f5mA02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9785 | 67 | 403 | 3.40.50.450 |
| af_Q4E657_92_285_3.40.50.450 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; | 0.9766 | 67 | 259 | 3.40.50.450 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A444Y6M9-F1-model_v4 | very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (EC 4.2.1.134) | 0.9925 | 164 | 300 |
GO:0003872
GO:0006002 GO:0006633 GO:0016020 GO:0046872 GO:0102158 |
| AF-A0A0F9GXG8-F1-model_v4 | Phosphofructokinase domain-containing protein | 0.9899 | 83 | 275 |
GO:0003872
GO:0006002 GO:0046872 |
| AF-M6TGE2-F1-model_v4 | deleted | 0.9899 | 222 | 307 |
|
| AF-A0A6L8U3V3-F1-model_v4 | ATP-dependent 6-phosphofructokinase | 0.9888 | 64 | 429 |
GO:0003872
GO:0005524 GO:0005737 GO:0006002 GO:0046872 |
| AF-A0A453QM86-F1-model_v4 | Phosphofructokinase domain-containing protein | 0.9886 | 57 | 327 |
GO:0003872
GO:0005524 GO:0006002 GO:0046872 |
Predicted Structure (AlphaFold2)
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