F211214

General Info

Members Datasets Scaffolds Average Seq Length
151 116 302 320

Family's Representative Sequence

Representative Sequence 3300006175|Ga0070712_100053074|Ga0070712_1000530743
Length 374
Sequence MVTGALWPAGHGLGGAHGPGTPGPGGHVVACIGETMAALVPAELESLATASTLRVDVAGAESNVAMYLADHGVRARWISRLGDDALGRRVARTVGAAGVDVSGVTFDPARSTGLLFKDPGPSAAPGARATRVTYYRRDSAASAMGPHLLADQALRTASLWHLSGITPALSPSCRALTRAALDVTHSADRPRPVVSFDVNYRAALWVADETAGDLLRELADAADIVFVGLDEAAILWGAAAREPAGVRALLPSPRIVVVKDAARGATAFHGDTLTLVPALRVDVVEPVGAGDAFAAGFLAELLNSGDVVRCLRSGHLTAASALTVAGDHGPLPEAAIREHLLTTDDATWARAQFSRAGPRPPGRAARRRPAARRR

Samples

Sample ID Description Type Environment
1 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
13 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
14 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
15 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
16 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
17 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
19 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
24 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
25 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
26 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
27 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
28 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
29 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
30 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
31 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
32 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
33 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
34 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
35 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
36 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
37 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
38 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
39 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
40 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
41 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
42 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
43 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
44 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
45 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
46 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
47 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
48 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
49 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
50 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
51 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
52 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
53 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
54 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
55 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
56 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
57 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
58 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
59 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
60 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
61 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
62 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
63 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
64 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
65 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
66 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
67 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
68 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
69 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
70 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
71 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
72 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
73 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
74 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
75 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
76 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
77 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
78 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
79 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
80 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
81 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
82 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
83 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
84 2501939600 Micromonospora sp. L5 Isolate Unclassified
85 2558860280 Kutzneria sp. 744 Isolate Unclassified
86 2582580736 Prauserella sp. Am3 Isolate Unclassified
87 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
88 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
89 2643221630 Microbacterium sp. Root322 Isolate Unclassified
90 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
91 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
92 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
93 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
94 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
95 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
96 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
97 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
98 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
99 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
100 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
101 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
102 2855683550 Micromonospora sp. RP3T Isolate Unclassified
103 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
104 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
105 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
106 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
107 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
108 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
109 2919395869 Microbacterium resistens 2980 Isolate Unclassified
110 2928153084 Leifsonia sp. 563 Isolate Unclassified
111 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
112 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
113 649633069 Micromonospora sp. L5 Isolate Unclassified
114 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
115 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
116 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 76.82
Metatranscriptomes 1.32
Isolates 21.85

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.66
Nodule 0
Rhizoplane 0
Rhizosphere 70.2
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070712_100053074 3300006175 Bacteria 2829
2 JGI24737J22298_10012314 3300001990 Bacteria 2789
3 JGI24735J21928_10002389 3300002067 Bacteria 6523
4 JGI25154J39366_1007613 3300002738 Bacteria 1463
5 JGI25406J46586_10006024 3300003203 Bacteria 5609
6 Ga0006562J51391_1065516 3300003578 Bacteria 10510
7 Ga0006562J51391_1065518 3300003578 Bacteria 9533
8 Ga0070714_100001573 3300005435 Bacteria 16605
9 Ga0070714_100171742 3300005435 Bacteria 1967
10 Ga0070713_100004590 3300005436 Bacteria 9304
11 Ga0070713_100198726 3300005436 Bacteria 1810
12 Ga0070710_10003727 3300005437 Bacteria 7205
13 Ga0070711_100100784 3300005439 Bacteria 2101
14 Ga0068853_100097578 3300005539 Bacteria 2594
15 Ga0081539_10000125 3300005985 Bacteria 180646
16 Ga0070712_100032231 3300006175 Bacteria 3536
17 Ga0075369_10003268 3300006186 Bacteria 5890
18 Ga0075430_100064201 3300006846 Bacteria 3084
19 Ga0075431_100023086 3300006847 Bacteria 6360
20 Ga0075429_100004099 3300006880 Bacteria 12482
21 Ga0114129_10018332 3300009147 Bacteria 9971
22 Ga0209646_1000013 3300025246 Bacteria 565830
23 Ga0209646_1000014 3300025246 Bacteria 550484
24 Ga0207692_10000141 3300025898 Bacteria 22212
25 Ga0207693_10042585 3300025915 Bacteria 3574
26 Ga0207693_10081482 3300025915 Bacteria 2534
27 Ga0207700_10052537 3300025928 Bacteria 3047
28 Ga0207700_10090724 3300025928 Bacteria 2412
29 Ga0207664_10003655 3300025929 Bacteria 10302
30 Ga0207664_10051255 3300025929 Bacteria 3258
31 Ga0307515_10068312 3300028794 Bacteria 4884
32 Ga0307511_10000178 3300030521 Bacteria 62672
33 Ga0316176_1142833 3300030732 Bacteria 2822
34 Ga0314311_1016822 3300030733 Bacteria 6523
35 Ga0307513_10049292 3300031456 Bacteria 4563
36 Ga0307513_10384117 3300031456 Bacteria 1143
37 Ga0307509_10012771 3300031507 Bacteria 10003
38 Ga0307509_10184930 3300031507 Bacteria 1943
39 Ga0307518_10001053 3300031838 Bacteria 20666
40 Ga0307406_10001813 3300031901 Bacteria 11662
41 Ga0307406_10006615 3300031901 Bacteria 6407
42 Ga0307412_10023104 3300031911 Bacteria 3822
43 Ga0307414_10228187 3300032004 Bacteria 1534
44 Ga0307414_10522822 3300032004 Bacteria 1053
45 Ga0307411_10011136 3300032005 Bacteria 4836
46 Ga0307415_100213969 3300032126 Bacteria 1540
47 Ga0307507_10017668 3300033179 Bacteria 8172
48 Ga0373937_0248714 3300036401 Bacteria 1676
49 Ga0466965_0006111 3300044683 Bacteria 5443
50 Ga0466965_0007066 3300044683 Bacteria 5138
51 Ga0466965_0019365 3300044683 Bacteria 3267
52 Ga0466965_0180178 3300044683 Bacteria 1114
53 Ga0466966_0058752 3300044684 Bacteria 2430
54 Ga0466961_0131416 3300044693 Bacteria 1569
55 Ga0466970_0060023 3300044765 Bacteria 2037
56 Ga0466960_0000395 3300044901 Bacteria 14896
57 Ga0466960_0082874 3300044901 Bacteria 1619
58 Ga0466959_0005561 3300045049 Bacteria 8653
59 Ga0495627_000723 3300046453 Bacteria 25036
60 Ga0495592_0013909 3300046454 Bacteria 6114
61 Ga0495592_0206924 3300046454 Bacteria 1320
62 Ga0495603_0010618 3300046455 Bacteria 5581
63 Ga0495651_0000294 3300046462 Bacteria 38829
64 Ga0495651_0074085 3300046462 Bacteria 2583
65 Ga0495653_0023048 3300046463 Bacteria 5035
66 Ga0495580_0070599 3300046472 Bacteria 2440
67 Ga0495662_0002192 3300046476 Bacteria 9829
68 Ga0495594_0213313 3300046499 Bacteria 1101
69 Ga0495608_0005323 3300046511 Bacteria 9192
70 Ga0495618_0298927 3300046514 Bacteria 1000
71 Ga0495628_0004514 3300046516 Bacteria 12333
72 Ga0495628_0253972 3300046516 Bacteria 1311
73 Ga0495666_0013527 3300046526 Bacteria 4067
74 Ga0495652_0001934 3300046529 Bacteria 22030
75 Ga0495652_0074821 3300046529 Bacteria 2815
76 Ga0495652_0152317 3300046529 Bacteria 1805
77 Ga0495665_0106459 3300046531 Bacteria 1471
78 Ga0495640_0002386 3300046533 Bacteria 15082
79 Ga0495640_0014297 3300046533 Bacteria 6010
80 Ga0495586_0011435 3300046535 Bacteria 4721
81 Ga0495586_0297512 3300046535 Bacteria 924
82 Ga0495587_0058530 3300046536 Bacteria 2263
83 Ga0495645_0069063 3300046543 Bacteria 2550
84 Ga0495645_0083487 3300046543 Bacteria 2289
85 Ga0495667_0004379 3300046559 Bacteria 9535
86 Ga0495634_0068918 3300046642 Bacteria 2335
87 Ga0495635_0000865 3300046663 Bacteria 19865
88 Ga0495635_0140571 3300046663 Bacteria 1644
89 Ga0495588_0016061 3300046674 Bacteria 3613
90 Ga0495657_0007215 3300046675 Bacteria 8619
91 Ga0495613_0012957 3300046689 Bacteria 6194
92 Ga0495600_0109101 3300046809 Bacteria 1802
93 Ga0495581_0197270 3300047315 Bacteria 1177
94 Ga0495604_0006571 3300047317 Bacteria 9216
95 Ga0495604_0036761 3300047317 Bacteria 3859
96 Ga0495674_0064411 3300047319 Bacteria 3186
97 Ga0495676_0023683 3300047321 Bacteria 5324
98 Ga0495675_0015453 3300047444 Bacteria 4826
99 Ga0495675_0072433 3300047444 Bacteria 2174
100 Ga0495593_0036846 3300047673 Bacteria 2649
101 Ga0495614_0009911 3300048089 Bacteria 4206
102 Ga0496117_0000778 3300048920 Bacteria 50197
103 Ga0496117_0008823 3300048920 Bacteria 9510
104 Ga0496117_0045752 3300048920 Bacteria 3156
105 Ga0496122_0063955 3300048925 Bacteria 2680
106 Ga0496125_0033239 3300048928 Bacteria 4568
107 Ga0496125_0102544 3300048928 Bacteria 2102
108 Ga0496126_0014943 3300048929 Bacteria 7828
109 Ga0496126_0096467 3300048929 Bacteria 2592
110 nmdc:mga05p37_65028_c1 3300050507 Bacteria 4488
111 nmdc:mga0qj67_17966_c1 3300050509 Bacteria 5385
112 nmdc:mga06r32_87636_c1 3300050510 Bacteria 3038
113 Ga0495601_0001936 3300053077 Bacteria 11584
114 Ga0495601_0002198 3300053077 Bacteria 10983
115 Ga0495601_0027079 3300053077 Bacteria 3543
116 Ga0495612_0004987 3300053078 Bacteria 5495
117 Ga0495612_0042400 3300053078 Bacteria 1857
118 Ga0495612_0171121 3300053078 Bacteria 951
119 2501941640 2501939600 Bacteria 6907073
120 2559430527 2558860280 Bacteria 11429938
121 2583153223 2582580736 Bacteria 5325865
122 2623586885 2622736626 Bacteria 7181580
123 2643732305 2643221542 Bacteria 3563959
124 2644171123 2643221630 Bacteria 3601215
125 2644680655 2643221724 Bacteria 3593515
126 2730230922 2728369380 Bacteria 3620317
127 2739365373 2738543034 Bacteria 6084756
128 2747952565 2747842429 Bacteria 3914386
129 2774392247 2773857762 Bacteria 5971770
130 2795783157 2795385470 Bacteria 8317180
131 2809196055 2808606439 Bacteria 5952208
132 2809590863 2808606522 Bacteria 9488490
133 2816421195 2816332119 Bacteria 8120218
134 2844844834 2844841374 Bacteria 3917147
135 2852648902 2852646457 Bacteria 3408613
136 2852664359 2852663356 Bacteria 4090475
137 2855686370 2855683550 Bacteria 7134265
138 2856863240 2856858025 Bacteria 7255264
139 2857724888 2857723135 Bacteria 4217853
140 2891970553 2891968417 Bacteria 5821697
141 2899363430 2899359706 Bacteria 10940472
142 2915771883 2915768154 Bacteria 8424322
143 2917738468 2917736166 Bacteria 9690793
144 2919396229 2919395869 Bacteria 3704152
145 2928155607 2928153084 Bacteria 4020257
146 2945968502 2945968032 Bacteria 4111363
147 2946084318 2946080515 Bacteria 4310960
148 649814993 649633069 Bacteria 6962533
149 8004023062 8004021418 Bacteria 4313954
150 8004185838 8004182704 Bacteria 3391155
151 8047719546 8047710418 Bacteria 11023148
152 Ga0070712_100053074
153 JGI24737J22298_10012314
154 JGI24735J21928_10002389
155 JGI25154J39366_1007613
156 JGI25406J46586_10006024
157 Ga0006562J51391_1065516
158 Ga0006562J51391_1065518
159 Ga0070714_100001573
160 Ga0070714_100171742
161 Ga0070713_100004590
162 Ga0070713_100198726
163 Ga0070710_10003727
164 Ga0070711_100100784
165 Ga0068853_100097578
166 Ga0081539_10000125
167 Ga0070712_100032231
168 Ga0075369_10003268
169 Ga0075430_100064201
170 Ga0075431_100023086
171 Ga0075429_100004099
172 Ga0114129_10018332
173 Ga0209646_1000013
174 Ga0209646_1000014
175 Ga0207692_10000141
176 Ga0207693_10042585
177 Ga0207693_10081482
178 Ga0207700_10052537
179 Ga0207700_10090724
180 Ga0207664_10003655
181 Ga0207664_10051255
182 Ga0307515_10068312
183 Ga0307511_10000178
184 Ga0316176_1142833
185 Ga0314311_1016822
186 Ga0307513_10049292
187 Ga0307513_10384117
188 Ga0307509_10012771
189 Ga0307509_10184930
190 Ga0307518_10001053
191 Ga0307406_10001813
192 Ga0307406_10006615
193 Ga0307412_10023104
194 Ga0307414_10228187
195 Ga0307414_10522822
196 Ga0307411_10011136
197 Ga0307415_100213969
198 Ga0307507_10017668
199 Ga0373937_0248714
200 Ga0466965_0006111
201 Ga0466965_0007066
202 Ga0466965_0019365
203 Ga0466965_0180178
204 Ga0466966_0058752
205 Ga0466961_0131416
206 Ga0466970_0060023
207 Ga0466960_0000395
208 Ga0466960_0082874
209 Ga0466959_0005561
210 Ga0495627_000723
211 Ga0495592_0013909
212 Ga0495592_0206924
213 Ga0495603_0010618
214 Ga0495651_0000294
215 Ga0495651_0074085
216 Ga0495653_0023048
217 Ga0495580_0070599
218 Ga0495662_0002192
219 Ga0495594_0213313
220 Ga0495608_0005323
221 Ga0495618_0298927
222 Ga0495628_0004514
223 Ga0495628_0253972
224 Ga0495666_0013527
225 Ga0495652_0001934
226 Ga0495652_0074821
227 Ga0495652_0152317
228 Ga0495665_0106459
229 Ga0495640_0002386
230 Ga0495640_0014297
231 Ga0495586_0011435
232 Ga0495586_0297512
233 Ga0495587_0058530
234 Ga0495645_0069063
235 Ga0495645_0083487
236 Ga0495667_0004379
237 Ga0495634_0068918
238 Ga0495635_0000865
239 Ga0495635_0140571
240 Ga0495588_0016061
241 Ga0495657_0007215
242 Ga0495613_0012957
243 Ga0495600_0109101
244 Ga0495581_0197270
245 Ga0495604_0006571
246 Ga0495604_0036761
247 Ga0495674_0064411
248 Ga0495676_0023683
249 Ga0495675_0015453
250 Ga0495675_0072433
251 Ga0495593_0036846
252 Ga0495614_0009911
253 Ga0496117_0000778
254 Ga0496117_0008823
255 Ga0496117_0045752
256 Ga0496122_0063955
257 Ga0496125_0033239
258 Ga0496125_0102544
259 Ga0496126_0014943
260 Ga0496126_0096467
261 nmdc:mga05p37_65028_c1
262 nmdc:mga0qj67_17966_c1
263 nmdc:mga06r32_87636_c1
264 Ga0495601_0001936
265 Ga0495601_0002198
266 Ga0495601_0027079
267 Ga0495612_0004987
268 Ga0495612_0042400
269 Ga0495612_0171121
270 2501941640
271 2559430527
272 2583153223
273 2623586885
274 2643732305
275 2644171123
276 2644680655
277 2730230922
278 2739365373
279 2747952565
280 2774392247
281 2795783157
282 2809196055
283 2809590863
284 2816421195
285 2844844834
286 2852648902
287 2852664359
288 2855686370
289 2856863240
290 2857724888
291 2891970553
292 2899363430
293 2915771883
294 2917738468
295 2919396229
296 2928155607
297 2945968502
298 2946084318
299 649814993
300 8004023062
301 8004185838
302 8047719546

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00294

PfkB

pfkB family carbohydrate kinase

27

334

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1v19-assembly1.cif.gz_A 2-keto-3-deoxygluconate kinase from thermus thermophilus 0.8479 5 275
3k9e-assembly1.cif.gz_B crystal structure of a putative ribokinase ii (apo form) from e.coli 0.8428 5 291
2v78-assembly1.cif.gz_A crystal structure of sulfolobus solfataricus 2-keto-3-deoxygluconate kinase 0.8421 5 292
2dcn-assembly1.cif.gz_D crystal structure of 2-keto-3-deoxygluconate kinase from sulfolobus tokodaii complexed with 2-keto-6-phosphogluconate (alpha-furanose form) 0.8384 6 293
3iq0-assembly1.cif.gz_B crystal structure of a putative ribokinase ii in complex with atp and mg+2 from e.coli 0.8361 5 291
ID Description Score Start End Superfamily
af_P39282_4_494_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 1.009 239 267 1.20.1740.10
af_Q58671_3_387_1.20.1530.20 Mainly Alpha;Up-down Bundle;Na+/H+ antiporter like fold; 0.847 237 268 1.20.1530.20
2varB00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8416 5 292 3.40.1190.20
af_C6TGN8_61_381_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8351 6 293 3.40.1190.20
3iq0B00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.829 5 291 3.40.1190.20
ID Description Score Start End GO Terms
AF-A0A7X6Z0W3-F1-model_v4 Sugar kinase 0.9423 5 125 GO:0016301
AF-A0A3C1DV57-F1-model_v4 Carbohydrate kinase PfkB domain-containing protein 0.9388 6 94
AF-A0A7V9KI40-F1-model_v4 Carbohydrate kinase PfkB domain-containing protein 0.935 1 116
AF-A0A7X6Z0W3-F1-model_v4 Sugar kinase 0.9196 5 125 GO:0016301
AF-A0A0F0HPB5-F1-model_v4 Sugar kinase 0.9185 1 305 GO:0016301

Map