F210814

General Info

Members Datasets Scaffolds Average Seq Length
151 118 146 368

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100000001|Ga0070714_100000001450
Length 396
Sequence VVVARSSARRRRGSYRRDVTQVVEAGAGLAVEAVELVRIRIPLVAPFRTSFGTETERDVLLVHVLGRDSEGWGECVAMEEPLYSSEYVDAAHDVVVRHLLPRLLGAGEVRAEAVASLLEPIKGHRMAKAAVEMAWLDAQLRFEKRSLAAYLGSVRAAVDCGVSVGIHDEVPALLRTVQGYLDDGYRRIKLKIEPGADIEQVRAVRELIGPDFPLQVDANTAYTLDDAEHLARLDEFNLLLIEQPLPEEQLLAHAKLARRVKTPICLDESIVSAVVCEEALEMGAGAIINIKPGRVGGYIEAKKIHDLCLARGVPVWCGGMLETGIGRAANVALAALPGFTLPGDTSASDRYYRQDITAPFVLEEGRLAVPQGPGLGVEVLREVVDGLATSSQTIPA

Samples

Sample ID Description Type Environment
1 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
2 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
3 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
4 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
24 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
31 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
32 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
33 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
36 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
54 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
55 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
56 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
57 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
58 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
59 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
60 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
61 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
62 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
63 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
64 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
65 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
66 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
67 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
68 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
69 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
70 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
71 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
72 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
73 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
74 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
75 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
76 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
77 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
78 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
79 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
80 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
81 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
82 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
83 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
84 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
85 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
86 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
87 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
88 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
89 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
90 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
91 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
92 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
93 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
94 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
95 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
96 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
97 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
108 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
109 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
112 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
113 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
114 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
115 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
116 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
117 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
118 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.03
Metatranscriptomes 0.66
Isolates 3.31

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.6
Nodule 0
Rhizoplane 9.93
Rhizosphere 77.48
Stem 0
Stem Tuber 0.66
Unclassified 1.32

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10008520 3300005327 Bacteria 8244
2 Ga0070683_100023569 3300005329 Bacteria 5506
3 Ga0070670_100010381 3300005331 Bacteria 7946
4 Ga0070661_100132931 3300005344 Bacteria 1870
5 Ga0070675_100067015 3300005354 Bacteria 2970
6 Ga0070671_100055412 3300005355 Bacteria 3298
7 Ga0070714_100000001 3300005435 Bacteria 469087
8 Ga0070714_100001682 3300005435 Bacteria 16083
9 Ga0070714_100001726 3300005435 Bacteria 15924
10 Ga0070714_100225850 3300005435 Bacteria 1723
11 Ga0070714_100241154 3300005435 Bacteria 1668
12 Ga0070713_100274486 3300005436 Bacteria 1545
13 Ga0070707_100006733 3300005468 Bacteria 10650
14 Ga0070707_100007900 3300005468 Bacteria 9875
15 Ga0070698_100013950 3300005471 Bacteria 8496
16 Ga0070684_100026586 3300005535 Bacteria 4877
17 Ga0070686_100091571 3300005544 Bacteria 2035
18 Ga0068856_100116832 3300005614 Bacteria 2668
19 Ga0068864_100004861 3300005618 Bacteria 11003
20 Ga0068863_100029413 3300005841 Bacteria 5244
21 Ga0081455_10041278 3300005937 Bacteria 4059
22 Ga0070717_10000007 3300006028 Bacteria 304340
23 Ga0070717_10001401 3300006028 Bacteria 16620
24 Ga0070717_10187348 3300006028 Bacteria 1806
25 Ga0075365_10004285 3300006038 Bacteria 7532
26 Ga0075365_10013577 3300006038 Bacteria 4878
27 Ga0075365_10078358 3300006038 Bacteria 2234
28 Ga0075363_100016459 3300006048 Bacteria 3652
29 Ga0075364_10007322 3300006051 Bacteria 6550
30 Ga0075364_10014524 3300006051 Bacteria 4868
31 Ga0075364_10016450 3300006051 Bacteria 4602
32 Ga0070712_100059756 3300006175 Bacteria 2686
33 Ga0075367_10061603 3300006178 Bacteria 2239
34 Ga0075431_100019668 3300006847 Bacteria 6889
35 Ga0075436_100093022 3300006914 Bacteria 2096
36 Ga0114129_10000285 3300009147 Bacteria 58275
37 Ga0114129_10230351 3300009147 Bacteria 2495
38 Ga0105242_10054460 3300009176 Bacteria 3270
39 Ga0105248_10068897 3300009177 Bacteria 3972
40 Ga0157369_10339705 3300013105 Bacteria 1560
41 Ga0157375_10052449 3300013308 Bacteria 4010
42 Ga0163163_10001790 3300014325 Bacteria 18105
43 Ga0163163_10123612 3300014325 Bacteria 2624
44 Ga0157377_10100418 3300014745 Bacteria 1723
45 Ga0197907_10357703 3300020069 Bacteria 1426
46 Ga0207692_10000070 3300025898 Bacteria 29852
47 Ga0207643_10148168 3300025908 Bacteria 1405
48 Ga0207705_10095156 3300025909 Bacteria 2185
49 Ga0207649_10056089 3300025920 Bacteria 2458
50 Ga0207652_10299275 3300025921 Bacteria 1452
51 Ga0207659_10045839 3300025926 Bacteria 3085
52 Ga0207700_10366922 3300025928 Bacteria 1256
53 Ga0207664_10000010 3300025929 Bacteria 298623
54 Ga0207664_10000178 3300025929 Bacteria 49381
55 Ga0207664_10078316 3300025929 Bacteria 2681
56 Ga0207644_10009327 3300025931 Bacteria 6444
57 Ga0207644_10053871 3300025931 Bacteria 2896
58 Ga0207686_10119021 3300025934 Bacteria 1795
59 Ga0207665_10009434 3300025939 Bacteria 6404
60 Ga0207661_10088941 3300025944 Bacteria 2568
61 Ga0207702_10090201 3300026078 Bacteria 2682
62 Ga0207676_10015588 3300026095 Bacteria 5487
63 Ga0207675_100361404 3300026118 Bacteria 1424
64 Ga0265338_10002792 3300028800 Bacteria 25536
65 Ga0307410_10012431 3300031852 Bacteria 4924
66 Ga0307406_10014431 3300031901 Bacteria 4546
67 Ga0307407_10008674 3300031903 Bacteria 4681
68 Ga0307412_10275179 3300031911 Bacteria 1319
69 Ga0307409_100000568 3300031995 Bacteria 16049
70 Ga0307416_100000099 3300032002 Bacteria 54301
71 Ga0307415_100000074 3300032126 Bacteria 41368
72 Ga0373937_0091023 3300036401 Bacteria 2826
73 Ga0395898_0171092 3300037466 Bacteria 2077
74 Ga0436364_0197188 3300037853 Bacteria 5756
75 Ga0395901_0049977 3300038443 Bacteria 4345
76 Ga0436362_0934145 3300039453 Bacteria 4883
77 Ga0466965_0001263 3300044683 Bacteria 10054
78 Ga0466961_0050042 3300044693 Bacteria 2669
79 Ga0466957_0069724 3300044842 Bacteria 2172
80 Ga0466967_0021239 3300045976 Bacteria 5266
81 Ga0466967_0161492 3300045976 Bacteria 2103
82 Ga0495629_0034236 3300046459 Bacteria 3591
83 Ga0495629_0050931 3300046459 Bacteria 2899
84 Ga0495651_0153127 3300046462 Bacteria 1659
85 Ga0495606_0026158 3300046507 Bacteria 4162
86 Ga0495618_0043375 3300046514 Bacteria 2838
87 Ga0495630_0005274 3300046517 Bacteria 9120
88 Ga0495652_0036964 3300046529 Bacteria 4240
89 Ga0495665_0118762 3300046531 Bacteria 1385
90 Ga0495645_0147594 3300046543 Bacteria 1637
91 Ga0495668_0000787 3300046616 Bacteria 36750
92 Ga0495634_0011190 3300046642 Bacteria 6542
93 Ga0495625_0000918 3300046660 Bacteria 39599
94 Ga0495647_0010568 3300046681 Bacteria 3145
95 Ga0495669_0004759 3300046684 Bacteria 5628
96 Ga0495581_0150735 3300047315 Bacteria 1358
97 Ga0495604_0129201 3300047317 Bacteria 1818
98 Ga0495674_0000870 3300047319 Bacteria 28858
99 Ga0495680_0058299 3300047322 Bacteria 2984
100 Ga0495626_0002774 3300048091 Bacteria 11746
101 Ga0496100_0008033 3300048903 Bacteria 5863
102 Ga0496100_0012881 3300048903 Bacteria 4807
103 Ga0496101_0004555 3300048904 Bacteria 8753
104 Ga0496101_0063413 3300048904 Bacteria 2690
105 Ga0496104_0004405 3300048907 Bacteria 12262
106 Ga0496104_0139994 3300048907 Bacteria 2325
107 Ga0496106_0014987 3300048909 Bacteria 5735
108 Ga0496107_0018811 3300048910 Bacteria 4869
109 Ga0496107_0149989 3300048910 Bacteria 1724
110 Ga0496108_0005924 3300048911 Bacteria 9905
111 Ga0496110_0153334 3300048913 Bacteria 2086
112 Ga0496111_0051038 3300048914 Bacteria 2986
113 Ga0496113_0015420 3300048916 Bacteria 5251
114 Ga0496114_0031308 3300048917 Bacteria 4378
115 Ga0496114_0078147 3300048917 Bacteria 2792
116 Ga0501031_0173085 3300049568 Bacteria 1411
117 Ga0501033_0063406 3300049570 Bacteria 2720
118 Ga0501034_0002341 3300049571 Bacteria 23127
119 Ga0501036_0068376 3300049572 Bacteria 3006
120 Ga0501036_0101907 3300049572 Bacteria 2428
121 Ga0501037_0011686 3300049573 Bacteria 6463
122 Ga0501038_0003974 3300049574 Bacteria 13736
123 Ga0501038_0020422 3300049574 Bacteria 5954
124 Ga0501042_0001551 3300049578 Bacteria 13598
125 Ga0501043_0001727 3300049579 Bacteria 18879
126 Ga0501043_0195340 3300049579 Bacteria 1572
127 Ga0501047_0031310 3300049581 Bacteria 5129
128 Ga0501047_0032002 3300049581 Bacteria 5075
129 Ga0501048_0001640 3300049582 Bacteria 17048
130 Ga0501069_0007789 3300049585 Bacteria 5624
131 Ga0501070_0000140 3300049586 Bacteria 65899
132 Ga0501070_0026554 3300049586 Bacteria 4858
133 Ga0501074_0011693 3300049590 Bacteria 6379
134 Ga0501080_0223659 3300049742 Bacteria 1722
135 Ga0501035_0007583 3300049822 Bacteria 10138
136 nmdc:mga00v17_35660_c1 3300050491 Bacteria 2962
137 nmdc:mga00v17_37569_c1 3300050491 Bacteria 2893
138 nmdc:mga00v17_4832_c1 3300050491 Bacteria 7058
139 nmdc:mga00v17_49754_c1 3300050491 Bacteria 2544
140 nmdc:mga0yw44_2219_c1 3300050492 Bacteria 8185
141 nmdc:mga0yw44_86078_c1 3300050492 Bacteria 1979
142 nmdc:mga0yw44_89758_c1 3300050492 Bacteria 1940
143 nmdc:mga05p37_13039_c1 3300050507 Bacteria 9948
144 nmdc:mga08x19_121611_c1 3300050514 Bacteria 1751
145 nmdc:mga0a205_23380_c1 3300050515 Bacteria 5862
146 Ga0500568_0001283 3300053139 Bacteria 16535

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300048913 Ga0496110_0153334 Ga0496110_0153334_318_1337 337
2 3300009147 Ga0114129_10000285 Ga0114129_100002854 344
3 3300025921 Ga0207652_10299275 Ga0207652_102992752 344
4 3300050507 nmdc:mga05p37_13039_c1 nmdc:mga05p37_13039_c1_7725_8903 344
5 3300005435 Ga0070714_100001682 Ga0070714_10000168210 345
6 3300005471 Ga0070698_100013950 Ga0070698_1000139503 345
7 3300025929 Ga0207664_10000178 Ga0207664_1000017826 345
8 3300049822 Ga0501035_0007583 Ga0501035_0007583_9056_10126 345
9 3300050491 nmdc:mga00v17_37569_c1 nmdc:mga00v17_37569_c1_251_1390 352
10 3300006178 Ga0075367_10061603 Ga0075367_100616032 353
11 3300044693 Ga0466961_0050042 Ga0466961_0050042_1186_2628 354
12 3300006038 Ga0075365_10004285 Ga0075365_100042853 355
13 3300006051 Ga0075364_10007322 Ga0075364_100073229 355
14 3300050491 nmdc:mga00v17_4832_c1 nmdc:mga00v17_4832_c1_5703_6842 355
15 3300050492 nmdc:mga0yw44_2219_c1 nmdc:mga0yw44_2219_c1_4064_5203 355
16 3300006038 Ga0075365_10078358 Ga0075365_100783581 356
17 3300006051 Ga0075364_10014524 Ga0075364_100145241 356
18 3300050491 nmdc:mga00v17_49754_c1 nmdc:mga00v17_49754_c1_537_1676 356
19 3300050492 nmdc:mga0yw44_86078_c1 nmdc:mga0yw44_86078_c1_504_1643 356
20 3300049570 Ga0501033_0063406 Ga0501033_0063406_104_1210 357
21 3300049572 Ga0501036_0068376 Ga0501036_0068376_1676_2782 357
22 3300049574 Ga0501038_0020422 Ga0501038_0020422_1020_2126 357
23 3300049579 Ga0501043_0195340 Ga0501043_0195340_141_1247 357
24 3300049581 Ga0501047_0032002 Ga0501047_0032002_176_1282 357
25 3300046507 Ga0495606_0026158 Ga0495606_0026158_2864_3970 358
26 3300046616 Ga0495668_0000787 Ga0495668_0000787_2919_4025 358
27 3300046660 Ga0495625_0000918 Ga0495625_0000918_8699_9805 358
28 3300048091 Ga0495626_0002774 Ga0495626_0002774_7749_8855 358
29 3300039453 Ga0436362_0934145 Ga0436362_0934145_1842_2951 359
30 iso_pu_bacteria 8001781756 8001782650 362
31 iso_pu_bacteria 2868088558 2868091017 363
32 iso_pu_bacteria 2873314349 2873318629 363
33 iso_pu_bacteria 2887478801 2887485306 363
34 iso_pu_bacteria 2899370129 2899372469 363
35 3300025898 Ga0207692_10000070 Ga0207692_1000007010 365
36 3300044683 Ga0466965_0001263 Ga0466965_0001263_2083_3186 365
37 3300049571 Ga0501034_0002341 Ga0501034_0002341_10780_11883 365
38 3300049572 Ga0501036_0101907 Ga0501036_0101907_442_1545 365
39 3300049573 Ga0501037_0011686 Ga0501037_0011686_3441_4544 365
40 3300049574 Ga0501038_0003974 Ga0501038_0003974_7523_8626 365
41 3300049578 Ga0501042_0001551 Ga0501042_0001551_5127_6230 365
42 3300049579 Ga0501043_0001727 Ga0501043_0001727_14376_15479 365
43 3300049581 Ga0501047_0031310 Ga0501047_0031310_3512_4615 365
44 3300049582 Ga0501048_0001640 Ga0501048_0001640_993_2096 365
45 3300049586 Ga0501070_0026554 Ga0501070_0026554_2799_3896 365
46 3300049590 Ga0501074_0011693 Ga0501074_0011693_206_1309 365
47 3300049742 Ga0501080_0223659 Ga0501080_0223659_607_1704 365
48 3300005435 Ga0070714_100241154 Ga0070714_1002411542 366
49 3300005468 Ga0070707_100006733 Ga0070707_1000067336 366
50 3300005468 Ga0070707_100007900 Ga0070707_1000079007 366
51 3300006028 Ga0070717_10000007 Ga0070717_10000007302 366
52 3300006914 Ga0075436_100093022 Ga0075436_1000930222 366
53 3300044842 Ga0466957_0069724 Ga0466957_0069724_749_1849 366
54 3300045976 Ga0466967_0021239 Ga0466967_0021239_263_1363 366
55 3300045976 Ga0466967_0161492 Ga0466967_0161492_237_1337 366
56 3300050514 nmdc:mga08x19_121611_c1 nmdc:mga08x19_121611_c1_444_1556 366
57 3300050515 nmdc:mga0a205_23380_c1 nmdc:mga0a205_23380_c1_1810_2922 366
58 3300005327 Ga0070658_10008520 Ga0070658_100085205 367
59 3300005329 Ga0070683_100023569 Ga0070683_1000235692 367
60 3300005331 Ga0070670_100010381 Ga0070670_1000103814 367
61 3300005344 Ga0070661_100132931 Ga0070661_1001329312 367
62 3300005354 Ga0070675_100067015 Ga0070675_1000670153 367
63 3300005355 Ga0070671_100055412 Ga0070671_1000554122 367
64 3300005435 Ga0070714_100000001 Ga0070714_100000001450 367
65 3300005435 Ga0070714_100001726 Ga0070714_1000017266 367
66 3300005435 Ga0070714_100225850 Ga0070714_1002258502 367
67 3300005436 Ga0070713_100274486 Ga0070713_1002744862 367
68 3300005535 Ga0070684_100026586 Ga0070684_1000265865 367
69 3300005544 Ga0070686_100091571 Ga0070686_1000915712 367
70 3300005614 Ga0068856_100116832 Ga0068856_1001168322 367
71 3300005618 Ga0068864_100004861 Ga0068864_1000048614 367
72 3300005841 Ga0068863_100029413 Ga0068863_1000294134 367
73 3300005937 Ga0081455_10041278 Ga0081455_100412782 367
74 3300006028 Ga0070717_10001401 Ga0070717_1000140116 367
75 3300006028 Ga0070717_10187348 Ga0070717_101873482 367
76 3300006038 Ga0075365_10013577 Ga0075365_100135773 367
77 3300006048 Ga0075363_100016459 Ga0075363_1000164593 367
78 3300006051 Ga0075364_10016450 Ga0075364_100164502 367
79 3300006175 Ga0070712_100059756 Ga0070712_1000597562 367
80 3300006847 Ga0075431_100019668 Ga0075431_1000196683 367
81 3300009147 Ga0114129_10230351 Ga0114129_102303512 367
82 3300009176 Ga0105242_10054460 Ga0105242_100544603 367
83 3300009177 Ga0105248_10068897 Ga0105248_100688972 367
84 3300013105 Ga0157369_10339705 Ga0157369_103397052 367
85 3300013308 Ga0157375_10052449 Ga0157375_100524492 367
86 3300014325 Ga0163163_10001790 Ga0163163_100017902 367
87 3300014325 Ga0163163_10123612 Ga0163163_101236122 367
88 3300014745 Ga0157377_10100418 Ga0157377_101004182 367
89 3300020069 Ga0197907_10357703 Ga0197907_103577031 367
90 3300025908 Ga0207643_10148168 Ga0207643_101481682 367
91 3300025909 Ga0207705_10095156 Ga0207705_100951562 367
92 3300025920 Ga0207649_10056089 Ga0207649_100560892 367
93 3300025926 Ga0207659_10045839 Ga0207659_100458392 367
94 3300025928 Ga0207700_10366922 Ga0207700_103669222 367
95 3300025929 Ga0207664_10000010 Ga0207664_10000010227 367
96 3300025929 Ga0207664_10078316 Ga0207664_100783162 367
97 3300025931 Ga0207644_10009327 Ga0207644_100093271 367
98 3300025931 Ga0207644_10053871 Ga0207644_100538712 367
99 3300025934 Ga0207686_10119021 Ga0207686_101190212 367
100 3300025939 Ga0207665_10009434 Ga0207665_100094348 367
101 3300025944 Ga0207661_10088941 Ga0207661_100889412 367
102 3300026078 Ga0207702_10090201 Ga0207702_100902013 367
103 3300026095 Ga0207676_10015588 Ga0207676_100155883 367
104 3300026118 Ga0207675_100361404 Ga0207675_1003614042 367
105 3300028800 Ga0265338_10002792 Ga0265338_1000279219 367
106 3300031852 Ga0307410_10012431 Ga0307410_100124312 367
107 3300031901 Ga0307406_10014431 Ga0307406_100144313 367
108 3300031903 Ga0307407_10008674 Ga0307407_100086742 367
109 3300031911 Ga0307412_10275179 Ga0307412_102751792 367
110 3300031995 Ga0307409_100000568 Ga0307409_1000005685 367
111 3300032002 Ga0307416_100000099 Ga0307416_1000000994 367
112 3300032126 Ga0307415_100000074 Ga0307415_10000007422 367
113 3300036401 Ga0373937_0091023 Ga0373937_0091023_1430_2533 367
114 3300037466 Ga0395898_0171092 Ga0395898_0171092_197_1300 367
115 3300037853 Ga0436364_0197188 Ga0436364_0197188_3210_4319 367
116 3300038443 Ga0395901_0049977 Ga0395901_0049977_3195_4298 367
117 3300046459 Ga0495629_0034236 Ga0495629_0034236_776_1882 367
118 3300046459 Ga0495629_0050931 Ga0495629_0050931_1153_2262 367
119 3300046462 Ga0495651_0153127 Ga0495651_0153127_201_1310 367
120 3300046514 Ga0495618_0043375 Ga0495618_0043375_1636_2745 367
121 3300046517 Ga0495630_0005274 Ga0495630_0005274_7699_8808 367
122 3300046529 Ga0495652_0036964 Ga0495652_0036964_2969_4078 367
123 3300046531 Ga0495665_0118762 Ga0495665_0118762_203_1312 367
124 3300046543 Ga0495645_0147594 Ga0495645_0147594_506_1615 367
125 3300046642 Ga0495634_0011190 Ga0495634_0011190_1369_2478 367
126 3300046681 Ga0495647_0010568 Ga0495647_0010568_744_1856 367
127 3300046684 Ga0495669_0004759 Ga0495669_0004759_4367_5479 367
128 3300047315 Ga0495581_0150735 Ga0495581_0150735_205_1320 367
129 3300047317 Ga0495604_0129201 Ga0495604_0129201_280_1389 367
130 3300047319 Ga0495674_0000870 Ga0495674_0000870_6933_8042 367
131 3300047322 Ga0495680_0058299 Ga0495680_0058299_1578_2687 367
132 3300048903 Ga0496100_0008033 Ga0496100_0008033_2623_3732 367
133 3300048903 Ga0496100_0012881 Ga0496100_0012881_2710_3819 367
134 3300048904 Ga0496101_0004555 Ga0496101_0004555_7070_8179 367
135 3300048904 Ga0496101_0063413 Ga0496101_0063413_829_1938 367
136 3300048907 Ga0496104_0004405 Ga0496104_0004405_8976_10082 367
137 3300048907 Ga0496104_0139994 Ga0496104_0139994_852_1961 367
138 3300048909 Ga0496106_0014987 Ga0496106_0014987_1708_2817 367
139 3300048910 Ga0496107_0018811 Ga0496107_0018811_72_1181 367
140 3300048910 Ga0496107_0149989 Ga0496107_0149989_40_1149 367
141 3300048911 Ga0496108_0005924 Ga0496108_0005924_6814_7920 367
142 3300048914 Ga0496111_0051038 Ga0496111_0051038_1472_2581 367
143 3300048916 Ga0496113_0015420 Ga0496113_0015420_1598_2704 367
144 3300048917 Ga0496114_0031308 Ga0496114_0031308_2644_3753 367
145 3300048917 Ga0496114_0078147 Ga0496114_0078147_583_1710 367
146 3300049568 Ga0501031_0173085 Ga0501031_0173085_159_1268 367
147 3300049585 Ga0501069_0007789 Ga0501069_0007789_4184_5311 367
148 3300049586 Ga0501070_0000140 Ga0501070_0000140_53682_54809 367
149 3300050491 nmdc:mga00v17_35660_c1 nmdc:mga00v17_35660_c1_348_1454 367
150 3300050492 nmdc:mga0yw44_89758_c1 nmdc:mga0yw44_89758_c1_66_1205 367
151 3300053139 Ga0500568_0001283 Ga0500568_0001283_3621_4733 367

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13378

MR_MLE_C

Enolase C-terminal domain-like

172

383

0.92

PF02746

MR_MLE_N

Mandelate racemase / muconate lactonizing enzyme, N-terminal domain

32

152

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
5fjp-assembly2.cif.gz_A n-acyl amino acid racemase from amycolatopsis sp ts-1-60: g291d f323y i293g mutant in complex with n-acetyl naphthylalanine 0.9928 1 367
4a6g-assembly1.cif.gz_A n-acyl amino acid racemase from amycalotopsis sp. ts-1-60: g291d- f323y mutant in complex with n-acetyl methionine 0.9928 1 367
1sja-assembly1.cif.gz_A x-ray structure of o-succinylbenzoate synthase complexed with n-acetylmethionine 0.9924 1 367
5fjr-assembly1.cif.gz_A n-acyl amino acid racemase from amycolatopsis sp. ts-1-60: q26a m50i g291d f323y mutant in complex with n-acetyl napthylalanine 0.9918 1 367
7s8w-assembly1.cif.gz_D-2 amycolatopsis sp. t-1-60 n-succinylamino acid racemase/o-succinylbenzoate synthase r266q mutant in complex with n-succinylphenylglycine 0.9903 1 367
ID Description Score Start End Superfamily
1sjaA01 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;Enolase-like, N-terminal domain 0.9748 1 114 3.30.390.10
1r0mA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.9703 117 345 3.20.20.120
1r0mA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.962 117 345 3.20.20.120
1wufA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.962 118 357 3.20.20.120
1wufA02 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Enolase-like C-terminal domain 0.943 118 357 3.20.20.120
ID Description Score Start End GO Terms
AF-A0A4Q4CQQ1-F1-model_v4 o-succinylbenzoate synthase (EC 4.2.1.113) 0.9985 113 367 GO:0009234
GO:0043748
AF-A0A6I2XA45-F1-model_v4 o-succinylbenzoate synthase (EC 4.2.1.113) 0.9975 143 367 GO:0009234
GO:0043748
AF-A0A1B6BFA4-F1-model_v4 O-succinylbenzoate synthase (EC 4.2.1.113) 0.9921 177 291 GO:0043748
GO:0046872
AF-A0A100JYV9-F1-model_v4 o-succinylbenzoate synthase (EC 4.2.1.113) 0.9918 37 367 GO:0009234
GO:0043748
AF-A0A3N5U9P1-F1-model_v4 o-succinylbenzoate synthase (EC 4.2.1.113) 0.9911 2 366 GO:0009234
GO:0043748

Feature Viewer

pLDDT pTM Quality
94.36 0.92 High
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Predicted Structure (AlphaFold2)

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